Metagenome / Metatranscriptome Family F057532

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057532
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	91 residues
Representative Sequence	MGWRKTGTFHAPQEILVMTCDVCERDIGYQDERRPRAHYEITRLPNPGAIDEQIPAAYVCSPECLRAFAAKASIEPDRLPPREGGITPRGKPPA
Number of Associated Samples	100
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.32 %
% of genes near scaffold ends (potentially truncated)	28.68 %
% of genes from short scaffolds (< 2000 bps)	72.06 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.588 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (15.441 % of family members)
Environment Ontology (ENVO)	Unclassified (20.588 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.647 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.66% β-sheet: 8.20% Coil/Unstructured: 81.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF06315	AceK_kinase	18.38
PF00076	RRM_1	14.71
PF01989	AcnX_swivel_put	7.35
PF14106	DUF4279	4.41
PF00210	Ferritin	2.21
PF01507	PAPS_reduct	1.47
PF04293	SpoVR	1.47
PF00291	PALP	1.47
PF00082	Peptidase_S8	1.47
PF00378	ECH_1	1.47
PF13545	HTH_Crp_2	1.47
PF01627	Hpt	1.47
PF03466	LysR_substrate	0.74
PF01841	Transglut_core	0.74
PF12697	Abhydrolase_6	0.74
PF02518	HATPase_c	0.74
PF01625	PMSR	0.74
PF00990	GGDEF	0.74
PF11666	DUF2933	0.74
PF03600	CitMHS	0.74
PF00248	Aldo_ket_red	0.74
PF03372	Exo_endo_phos	0.74
PF00528	BPD_transp_1	0.74
PF01850	PIN	0.74
PF07715	Plug	0.74
PF00463	ICL	0.74
PF02880	PGM_PMM_III	0.74
PF08379	Bact_transglu_N	0.74
PF04412	AcnX	0.74
PF12680	SnoaL_2	0.74
PF00072	Response_reg	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG4579	Isocitrate dehydrogenase kinase/phosphatase	Signal transduction mechanisms [T]	18.38
COG1786	Mevalonate 5-phosphate dehydratase subunit 2, swiveling domain (modified mevalonate pathway)	Lipid transport and metabolism [I]	7.35
COG2719	Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation (function unknown)	Cell cycle control, cell division, chromosome partitioning [D]	1.47
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.74
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.74
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG1679	Mevalonate 5-phosphate dehydratase subunit 1, aconitase superfamily (modified mevalonate pathway)	Lipid transport and metabolism [I]	0.74
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.59 %
Unclassified	root	N/A	4.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.59 %
Unclassified	root	N/A	4.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.59 %
Unclassified	root	N/A	4.41 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.35 %
Unclassified	root	N/A	4.41 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	66.18 %
Unclassified	root	N/A	4.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.21 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.47 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.41 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.74 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.74 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.41 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1.47 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.41 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.47 %
Alkalilimnicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Alkalilimnicola	0.74 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.74 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.41 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.47 %
Alkalilimnicola ehrlichii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Alkalilimnicola → Alkalilimnicola ehrlichii	0.74 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.74 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10000756	All Organisms → cellular organisms → Bacteria → Proteobacteria	24563	Open in IMG/M
3300002121\|C687J26615_10030656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1334	Open in IMG/M
3300002124\|C687J26631_10181237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	703	Open in IMG/M
3300002245\|JGIcombinedJ26739_100113803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2543	Open in IMG/M
3300002245\|JGIcombinedJ26739_100868971	All Organisms → cellular organisms → Bacteria → Proteobacteria	783	Open in IMG/M
3300005538\|Ga0070731_10273245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1122	Open in IMG/M
3300005541\|Ga0070733_10297701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1066	Open in IMG/M
3300005541\|Ga0070733_10693246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	684	Open in IMG/M
3300005542\|Ga0070732_10406014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	822	Open in IMG/M
3300005591\|Ga0070761_10028594	All Organisms → cellular organisms → Bacteria	3109	Open in IMG/M
3300005591\|Ga0070761_10882828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	565	Open in IMG/M
3300005602\|Ga0070762_11263431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	512	Open in IMG/M
3300005712\|Ga0070764_11014271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	524	Open in IMG/M
3300005921\|Ga0070766_10343922	Not Available	967	Open in IMG/M
3300006176\|Ga0070765_100664428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	984	Open in IMG/M
3300006804\|Ga0079221_10615086	Not Available	736	Open in IMG/M
3300007004\|Ga0079218_11035112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	828	Open in IMG/M
3300010379\|Ga0136449_100355688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2628	Open in IMG/M
3300010859\|Ga0126352_1020326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	763	Open in IMG/M
3300010880\|Ga0126350_10071425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1255	Open in IMG/M
3300011120\|Ga0150983_12606674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	515	Open in IMG/M
3300011430\|Ga0137423_1091941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	903	Open in IMG/M
3300011440\|Ga0137433_1040771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1369	Open in IMG/M
3300012164\|Ga0137352_1012427	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300012167\|Ga0137319_1071214	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300012931\|Ga0153915_10029696	All Organisms → cellular organisms → Bacteria → Proteobacteria	5468	Open in IMG/M
3300012931\|Ga0153915_10351402	All Organisms → cellular organisms → Bacteria → Proteobacteria	1658	Open in IMG/M
3300012964\|Ga0153916_10208435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1950	Open in IMG/M
3300012964\|Ga0153916_10592189	All Organisms → cellular organisms → Bacteria → Proteobacteria	1185	Open in IMG/M
3300014169\|Ga0181531_10004028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8910	Open in IMG/M
3300014169\|Ga0181531_10042259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2652	Open in IMG/M
3300014169\|Ga0181531_10103600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1701	Open in IMG/M
3300014169\|Ga0181531_10492295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	757	Open in IMG/M
3300014201\|Ga0181537_10008450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7879	Open in IMG/M
3300014201\|Ga0181537_10223608	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300014489\|Ga0182018_10432292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	701	Open in IMG/M
3300014493\|Ga0182016_10003307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	18506	Open in IMG/M
3300014498\|Ga0182019_10181781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1351	Open in IMG/M
3300014501\|Ga0182024_10806732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1143	Open in IMG/M
3300014501\|Ga0182024_11461728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	783	Open in IMG/M
3300014654\|Ga0181525_10442342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	716	Open in IMG/M
3300014655\|Ga0181516_10115026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1359	Open in IMG/M
3300014657\|Ga0181522_10611453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	662	Open in IMG/M
3300014838\|Ga0182030_10324430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1672	Open in IMG/M
3300015242\|Ga0137412_11038426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	584	Open in IMG/M
3300017936\|Ga0187821_10413528	Not Available	554	Open in IMG/M
3300017946\|Ga0187879_10012926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5263	Open in IMG/M
3300017972\|Ga0187781_11396087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	518	Open in IMG/M
3300018019\|Ga0187874_10247054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	733	Open in IMG/M
3300018020\|Ga0187861_10063976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1868	Open in IMG/M
3300018021\|Ga0187882_1403301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	519	Open in IMG/M
3300018031\|Ga0184634_10043426	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300018034\|Ga0187863_10359622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	810	Open in IMG/M
3300018059\|Ga0184615_10090051	All Organisms → cellular organisms → Bacteria → Proteobacteria	1724	Open in IMG/M
3300018063\|Ga0184637_10057122	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300018063\|Ga0184637_10080036	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300018077\|Ga0184633_10033473	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300018079\|Ga0184627_10005246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5735	Open in IMG/M
3300018079\|Ga0184627_10063644	All Organisms → cellular organisms → Bacteria → Proteobacteria	1921	Open in IMG/M
3300018082\|Ga0184639_10113516	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300019257\|Ga0180115_1047749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	828	Open in IMG/M
3300019268\|Ga0181514_1006312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2091	Open in IMG/M
3300020063\|Ga0180118_1182078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	800	Open in IMG/M
3300020063\|Ga0180118_1347881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1282	Open in IMG/M
3300021088\|Ga0210404_10663631	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300021401\|Ga0210393_10009953	All Organisms → cellular organisms → Bacteria	7418	Open in IMG/M
3300021402\|Ga0210385_10259661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1279	Open in IMG/M
3300021407\|Ga0210383_10997188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	711	Open in IMG/M
3300021420\|Ga0210394_10000292	All Organisms → cellular organisms → Bacteria → Proteobacteria	115962	Open in IMG/M
3300021420\|Ga0210394_10046201	All Organisms → cellular organisms → Bacteria → Proteobacteria	3818	Open in IMG/M
3300021420\|Ga0210394_10080635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2812	Open in IMG/M
3300021559\|Ga0210409_10046153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4114	Open in IMG/M
3300021559\|Ga0210409_11257533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	616	Open in IMG/M
3300024295\|Ga0224556_1002367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	5367	Open in IMG/M
3300025160\|Ga0209109_10003928	All Organisms → cellular organisms → Bacteria → Proteobacteria	8090	Open in IMG/M
3300026291\|Ga0209890_10194278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	653	Open in IMG/M
3300027591\|Ga0209733_1027432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1535	Open in IMG/M
3300027591\|Ga0209733_1111587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	684	Open in IMG/M
3300027660\|Ga0209736_1024083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1848	Open in IMG/M
3300027853\|Ga0209274_10341574	Not Available	771	Open in IMG/M
3300027867\|Ga0209167_10545436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	635	Open in IMG/M
3300027889\|Ga0209380_10264338	Not Available	1011	Open in IMG/M
3300027895\|Ga0209624_10004546	All Organisms → cellular organisms → Bacteria → Proteobacteria	9502	Open in IMG/M
3300027895\|Ga0209624_10046826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2764	Open in IMG/M
3300027895\|Ga0209624_10055856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2531	Open in IMG/M
3300027905\|Ga0209415_10037038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6764	Open in IMG/M
3300027908\|Ga0209006_10039656	All Organisms → cellular organisms → Bacteria	4251	Open in IMG/M
3300028773\|Ga0302234_10014502	All Organisms → cellular organisms → Bacteria → Proteobacteria	3888	Open in IMG/M
3300028773\|Ga0302234_10103803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1250	Open in IMG/M
3300028780\|Ga0302225_10130507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1221	Open in IMG/M
3300028780\|Ga0302225_10193141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	980	Open in IMG/M
3300029910\|Ga0311369_11456560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	515	Open in IMG/M
3300030490\|Ga0302184_10029935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2826	Open in IMG/M
3300030503\|Ga0311370_10615798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1297	Open in IMG/M
3300030520\|Ga0311372_10638387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1508	Open in IMG/M
3300030524\|Ga0311357_11813877	Not Available	507	Open in IMG/M
3300030739\|Ga0302311_10575592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	762	Open in IMG/M
3300030760\|Ga0265762_1037212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	942	Open in IMG/M
3300030906\|Ga0302314_10656425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1082	Open in IMG/M
3300031047\|Ga0073995_11998359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1212	Open in IMG/M
3300031234\|Ga0302325_10196761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3479	Open in IMG/M
3300031234\|Ga0302325_10524826	All Organisms → cellular organisms → Bacteria → Proteobacteria	1778	Open in IMG/M
3300031234\|Ga0302325_10861895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1265	Open in IMG/M
3300031234\|Ga0302325_11962002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	724	Open in IMG/M
3300031236\|Ga0302324_101263168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	978	Open in IMG/M
3300031236\|Ga0302324_101728379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	799	Open in IMG/M
3300031344\|Ga0265316_11265278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	510	Open in IMG/M
3300031524\|Ga0302320_10509749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1452	Open in IMG/M
3300031525\|Ga0302326_10581017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1673	Open in IMG/M
3300031525\|Ga0302326_12090458	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300031525\|Ga0302326_12176516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	709	Open in IMG/M
3300031525\|Ga0302326_12954574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	582	Open in IMG/M
3300031708\|Ga0310686_106905983	All Organisms → cellular organisms → Bacteria → Proteobacteria	8147	Open in IMG/M
3300031708\|Ga0310686_118930534	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300031708\|Ga0310686_119693033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1375	Open in IMG/M
3300031718\|Ga0307474_10157427	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300031949\|Ga0214473_10155731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2657	Open in IMG/M
3300032515\|Ga0348332_13480419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	587	Open in IMG/M
3300032805\|Ga0335078_11276651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	840	Open in IMG/M
3300032828\|Ga0335080_10062242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4133	Open in IMG/M
3300032893\|Ga0335069_10388004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1641	Open in IMG/M
3300032895\|Ga0335074_10225331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2244	Open in IMG/M
3300032898\|Ga0335072_11150289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Alkalilimnicola → Alkalilimnicola ehrlichii	695	Open in IMG/M
3300033134\|Ga0335073_10203925	All Organisms → cellular organisms → Bacteria	2451	Open in IMG/M
3300033134\|Ga0335073_10804117	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300033158\|Ga0335077_10586839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1165	Open in IMG/M
3300033158\|Ga0335077_10606365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1142	Open in IMG/M
3300033405\|Ga0326727_10348832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1405	Open in IMG/M
3300033408\|Ga0316605_12389172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	514	Open in IMG/M
3300033828\|Ga0334850_000033	All Organisms → cellular organisms → Bacteria	73228	Open in IMG/M
3300034124\|Ga0370483_0000069	All Organisms → cellular organisms → Bacteria → Proteobacteria	34175	Open in IMG/M
3300034124\|Ga0370483_0099739	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300034124\|Ga0370483_0111690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	904	Open in IMG/M
3300034199\|Ga0370514_000134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15151	Open in IMG/M
3300034199\|Ga0370514_031549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1312	Open in IMG/M
3300034199\|Ga0370514_059566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	962	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.26%
Host-Associated	Host-Associated	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.53%
Aquatic	Environmental → Aquatic	25.74%
Plants	Host-Associated → Plants	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.41%
Peat	Environmental → Terrestrial → Peat	18.38%
Freshwater	Environmental → Aquatic → Freshwater	16.91%
Sediment	Environmental → Aquatic → Sediment	8.82%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	18.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.71%
Loam	Environmental → Terrestrial → Soil → Loam	14.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.21%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	18.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.09%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.15%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.47%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.74%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	15.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.62%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.41%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	4.41%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.21%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.47%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.47%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.47%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.47%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.74%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.74%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_1000075628	3300000567	Peatlands Soil	MGWRKTGTFHAPQEILVMTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQNPAAYVCSPECLRAFAAKASSIPDRLPPREEGSKPHGKPPT*
C687J26615_100306562	3300002121	Soil	MGWRRTGAFYAAQEILVMTCDVCERDIGHEDGRRPKAHYEITRLPNLGAIDHQDPPALICSPECLRSFAAQESGPDTDPPRDEHPTRVKPLK*
C687J26631_101812372	3300002124	Soil	VERAATRTLSKTVMGWRRTGAFYAAQEILVMTCDVCERDIGHEDGRRPKAHYEITRLPNLGAIDHQDPPALICSPECLRSFAAQESGPDTDPPRDEHPTRVKPLK*
JGIcombinedJ26739_1001138034	3300002245	Forest Soil	MGWRKTATFHAPQEILVMTCDVCERDIGYEDERRPRAHYEIARLPNXGAIDXRNPVACVCSPECLRAFAAKASSEPDRVPPREGGFNPRS*
JGIcombinedJ26739_1008689712	3300002245	Forest Soil	MTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQSPAAYVCSPECLRAFAAKASSNPDALPPRGAGSKPPGKPPS*
Ga0070731_102732451	3300005538	Surface Soil	MGWRKTGLLRAPEEVLVMTCDICERDIGYEDGRRPRPHYEIARLPNPGTMGDQTPAVFVCSPECLRAFAAQASH
Ga0070733_102977013	3300005541	Surface Soil	MGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEVTRLPNAGALADKRPAAYVCSPECLRAFAAKASIEPDRLPPREDGSGSRRKPPG*
Ga0070733_106932462	3300005541	Surface Soil	MGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHYQVTRLPNAGALAEKHPAAYVCSPECLRAFAAKASIEPDRLPPREGGSAARGKPP*
Ga0070732_104060142	3300005542	Surface Soil	MGWRKTGVLRTPEEILVMTCDVCERDIGYEDGRRPRPHYEITQLPNHVLGDRPPATFVCSPECLRAFAARASHDPEGLPPREGGSGSSS*
Ga0070761_100285942	3300005591	Soil	MGWRKTGVLRAPEEILVMTCDVCERDIGYADGRRPRPHYEITRLPNQGTMGDQTPLVHVCSPECLRAFAAQASTDPKGLPPRGGTAPPA*
Ga0070761_108828281	3300005591	Soil	MGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEITRLPNPGAMADQHPAAYVCSPECLRAFAAKASTEPDRLPPREGGSAPRGKSSP*
Ga0070762_112634311	3300005602	Soil	ARPDCAASVEPGVSRRRLEIMGWRKTATFHAPQEILVMTCDVCERDIGYEDERRPRAHYEIARLPNLGAIDDRNPVACVCSPECLRAFAAKASSEPDRVPPREGGFNPRS*
Ga0070764_110142711	3300005712	Soil	MGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEVTRLPSAGALAEKHPAAYVCSPECLRAFAAKASVEPDRLPPREDGSGSRRKPPG*
Ga0070766_103439221	3300005921	Soil	MGWRKTGVLRAPEEILVMTCDVCERDIGYADGRRPRPHYEITRLPNQGTMGDQTPLVHVCSPECLRAFAAQASTDPKGLPPRG
Ga0070765_1006644281	3300006176	Soil	MGWRKTATFHAPQEILVMTCDVCERDIGYEDERRPRAHYEIARLPNLGAIDDRNPVACVCSPECLRAFAAKASSEPDRVPPREGGFNPR
Ga0079221_106150862	3300006804	Agricultural Soil	MGWRKTGVFRTPEEILVMTCDVCEREIGYEDGRRPRPHYVITRLPNQGAMGDQAPAVFVCSPECMRAFAARASHDPKGLPPRNGGTRSAT*
Ga0079218_110351122	3300007004	Agricultural Soil	MGWRKTGHFNPPQEVLVMTCDVCERDIGHEDGRRPKSHFEIRRLPNAGAMDDQEPPASICSPECLRSYAASAAEPPALRPRK*
Ga0136449_1003556883	3300010379	Peatlands Soil	MGWRKTGTFHAPQEILVMTCDVCERDIGYEDERRPRPHYEVARVPNMGVMEEQNPAVCVCSPQCLRAYAARESGDPDRSPTYIR*
Ga0126352_10203262	3300010859	Boreal Forest Soil	MGWRKTGTFHAPQEILVMTCDVCERDIGYEDERRPRAHFEVARLPNPGALGEQNPAAYVCSPQCLRAFAAKASGEPDRLPPPEGGSRPRGKPTK*
Ga0126350_100714251	3300010880	Boreal Forest Soil	GTFHAPQEILVMTCDVCERDIGYEDERRPRAHFEVARLPNPGALGEQNPAAYVCSPQCLRAFAAKASGEPDRLPPPEGGSRPRGKPTK*
Ga0150983_126066742	3300011120	Forest Soil	MGWRKTGVLRTPEEILVMTCDVCERDIGYQDGRRPRPHYEIRRLPNQATMGDQTPAAFVCSPECLRSFAAQASHDPKGLPPREGGTGSSE
Ga0137423_10919411	3300011430	Soil	MGWRRTGAFHAAEEILVMTCDVCEQDIGHEDGRRPKAHYEITRLPNPGSIDDQDPPALVCSTECLRAFAAQASEPGKGPPRGSSGPSSNTKK*
Ga0137433_10407712	3300011440	Soil	MGWRRTGAFHAAEEILVMTCDVCEQDIGHEDGRRPKAHYEITRLPNPGSIDDQDPPALVCSTECLRAFAAQASEPGKGPPRGSSGPSNSTKK*
Ga0137352_10124274	3300012164	Soil	MGWRGTGTFYAAQEILVMTCDVCERDIGHEDGRRPKAHYEITRLPNLGAIDHQDPPALICSPECLRSFAAQEFGPDKDSPQDEHPTRVKPQK*
Ga0137319_10712142	3300012167	Soil	MGWRRTGAFHAAEEVLVMTCDVCEQDIGHEDGRRPKAHYEISRLPNPGSIDDQDPPALVCSTECLRAFAAQASEPGKGPPRGSSGPSNSTKK*
Ga0153915_100296963	3300012931	Freshwater Wetlands	MGWRKTGNFHAPQEILVMTCDVCERDIGHEDGRRPQLHYEIKRMPNAGAMNEQDPPTMVCSAACLRAFGAKVSGIAPVPTRDAPSPPEKR*
Ga0153915_103514022	3300012931	Freshwater Wetlands	MGWRATGTFRAPEETLVMTCDVCERDIGYEDGRRPRAHYAIMRLPNPGAIDHQTPAALVCSPECLRAFAAIASSQPGGLSPRESGSGSPAKPPK*
Ga0153916_102084352	3300012964	Freshwater Wetlands	MGWRKTGNFHAPQEIQVMTCDVCERDIGHEDGRRPLTHYEIRRLPNAGAMNEQEPPTMVCSAACLRAFGAKVSGLASVPTRDAPPPPDKR*
Ga0153916_105921893	3300012964	Freshwater Wetlands	SGVSGCGGDSPPQPASSTADSGVTIMGWRATGTFRAPEETLVMTCDVCERDIGYEDGRRPRAHYAIMRLPNPGAIDHQTPAALVCSPECLRAFAAIASSQPGGLSPRESGSGSPAKPPK*
Ga0181531_100040283	3300014169	Bog	MGWRKTGSFHAPQEILVMTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAAGASSGPDRLPPRDPGDPPRGAKPPA*
Ga0181531_100422592	3300014169	Bog	MGWRKTATFHAPQEILVMTCDVCERDIGYEDQRRPREHYEIARLPSPRAIDEQNPTAYVCSPQCLRAFAAKASGEPERRPPRDGRFKPRGKPTK*
Ga0181531_101036003	3300014169	Bog	MGWRKTGGHHAAQEIVVLTCDVCERDIGHEDGRRPRAHYQILRLPNQGAMGHQAPSVCVCSPECLRAFAARASADPDGLPPRDGGGV*
Ga0181531_104922952	3300014169	Bog	MGWRKTGLFHAPQEILVMTCDVCERDIGYEDERRASAHYEITRLPNQGAMADQHPTAYVCSPECLRAFAAKASTEPDRLPPREGGSAPRGKSPS*
Ga0181537_100084507	3300014201	Bog	MGWRKTGSFHAPQEILVMTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAAGAASGPDRLPPRDPGDPPRGAKPPA*
Ga0181537_102236081	3300014201	Bog	MGWRKTGVMRVPEEILVMTCDVCERDIGYEDGRRPKPHYEILRLPNQGSMGDQAPAVFVCSSECLRAFASQAASDPNGLRPRGDTAPGA*
Ga0182018_104322922	3300014489	Palsa	MGWRKTGTFHAPQEVLVMTCDVCERDIGFEDGSRPRAHYEITRLPNPGALDVQNPAAYVCSPECLRAFAAKASSSPDGLPPREAGSQPRGKPPT*
Ga0182016_1000330717	3300014493	Bog	MGWRKTATFHAPQEILVMTCDVCERDIGYEDERRPREHYEIARLHGQRAIDEQNPTAYVCSPQCLRAFAAKASGEADRPPPGDGRFKPRGKPAK*
Ga0182019_101817812	3300014498	Fen	MGWRKTGTFHAPQEILVMTCDVCERDIGYQDERRPRAHYEITRLPNPGAIDEQIPAAYVCSPECLRAFAAKASIEPDRLPPREGGITPRGKPPA*
Ga0182024_108067323	3300014501	Permafrost	MGWRKTGTFHAPQEILIMTCDVCERDIGYEDERRPRAHYEVVRLPNPGALDVQNPASYICSPQCLRAFAAKASGQPDRLPPRPVGAKPRAKPTK*
Ga0182024_114617282	3300014501	Permafrost	MGWRKTGTFHAPQEILVMTCDVCERDIGHEDERRPRAHYEVVRLPNPGALDVQNPATYICSPQCLRAFAAKASGEPDRLPPAPVGAKPLAKPTK*
Ga0181525_104423422	3300014654	Bog	MGWRKTGKFHAPQEILVMTCDVCERDIGYEDERRPRAHYEVARLPSPRAIDEQNPSAYVCSPQCLRAFAAKASGEPDRLPPREGRFKPRGKPTK*
Ga0181516_101150264	3300014655	Bog	MGWRKTGSFHAPQEILVMTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAAGAASGPDRLPPRDP
Ga0181522_106114532	3300014657	Bog	MGWRKSGVLRAPEETLVMTCDVCERDIGYEDGRRPRPHYEIIRLPNPGGMDDQAPTVAVCSPECLRAFAAQASNDPDGLPSRQGGTAE
Ga0182030_103244302	3300014838	Bog	MGWRKTGSFHAPQEILVMTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAASAASRSDRLPPRNPGDPPRGAKPPA*
Ga0137412_110384261	3300015242	Vadose Zone Soil	MAWRRTATFHPPQEIVVMTCDVCECDIGHEDGRRPKAHYQITRHPNLGAIDDQDPPAIVCSPACLRAFAAQESGPRPPAE*
Ga0187821_104135281	3300017936	Freshwater Sediment	MGWRKTGVFRTPEEILVMTCDICERDIGYEDGRRPKPHYEVTRLPNQGTMGDQAPAVFVCSPECMRAFAAQASHDPKGLPPREGGTGSAT
Ga0187879_100129263	3300017946	Peatland	MGWRKTGTFHAPQEILVMTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQNPAAYVCSPECLRAFAAKASSIPDRLPPREEGSKPHGKPPT
Ga0187781_113960872	3300017972	Tropical Peatland	GWRKTGTFHAPQEVLVMTCDVCERDIGYEDERRPRPHYEIVRLPHPGTLHEHTAAAYVCSPECLRAFAAKASSEPDRLPPR
Ga0187874_102470542	3300018019	Peatland	MGWRKTGTFHAPQEILVMTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQNPAAYVCSPECLRAFAAKASSIPDRLPPREEGSKPHGKPP
Ga0187861_100639761	3300018020	Peatland	RKTGTFHAPQEILVMTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQNPAAYVCSPECLRAFAAKASSIPDRLPPREEGSKPHGKPPT
Ga0187882_14033012	3300018021	Peatland	CAGRVDLILSRRSVGIMGWRKTGTFHAPQEILVMTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQNPAAYVCSPECLRAFAAKASSIPDRLPPREEGSKPHGKPPT
Ga0184634_100434263	3300018031	Groundwater Sediment	MGWRKTGVFHAAQEILVMTCDVCERDIGNEDGRRPKAHYEITRLPNPGAIDDQDAPALICSTECLRAFAEQASEPGMGPARGGNDPIGKTRK
Ga0187863_103596222	3300018034	Peatland	MGWRKTGTFHAPQEILVMTCDVCERDIGYEDERRPRAHYEITRLPNPGAMAEKHPATYVCSPECLRAFAAKASSEPHRLPPREGGSPPRGKAPG
Ga0184615_100900512	3300018059	Groundwater Sediment	MGWRTTGSFQAPQEILVMTCDVCERDIGNEDGRRPKPHYVISRLPNLGTIDDQDPPALICSSACLRSFAAQAIDPDQHPPRTGGAKPRGTS
Ga0184637_100571224	3300018063	Groundwater Sediment	MGWRRTGAFHAAEEVLVMTCDVCERDIGHEDGRRPKAHYEITRLPNPGSIDDQDPPALVCSTECLRAFAAQASEPGMGPPRGPAGPSIKPRK
Ga0184637_100800363	3300018063	Groundwater Sediment	FHAAQEILVMTCDVCERDIGNEDGRRPKAHYEITRLPNPGAIDDQDAPALICSTECLRAFAAQASEPGMGPARGGNDPIGKTRK
Ga0184633_100334735	3300018077	Groundwater Sediment	MGWRKTGAFHAAQEILVMTCDVCERDIGNEDGRRPKAHYEITRLPNPGAIDDQDAPALICSTECLRAFAAQASEPGMGPARGGNDPIGKTRK
Ga0184627_100052463	3300018079	Groundwater Sediment	MGWRKTGAFHAAQEILVMTCDVCERDIGNEDGRRPKAHYEITRLPNPGAIDDQDAPALICSTECLRAFAEQASEPGMGPAQGGNDPIGKTRK
Ga0184627_100636442	3300018079	Groundwater Sediment	MGWRRTGAFHAAEEILVMTCDVCERDIGHEDGRRPKAHYEIARLPNPGSIDDQDPPALVCSTECLRAFAAQASEPGKGPPRGSSGPSSNKKKK
Ga0184639_101135162	3300018082	Groundwater Sediment	MGWRKTGVFHAAQEILVMTCDVCERDIGNEDGRRPKAHYEITRLPNPGAIDDQDAPALICSTECLRAFAAQASEPGMGPTRGGNDPIGKTRK
Ga0180115_10477493	3300019257	Groundwater Sediment	MGWRKTGAFHAADEILVMTCDVCERDIGHEDGRRPKAHYEISRLPNPGAIDDQDPTALVCSTECLRAFAAQASEPGKGPPRGSGAPSGNTKK
Ga0181514_10063122	3300019268	Peatland	MGWRKTGSFHAPQEILVMTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAAGAASGPDRLPPRDPGDPPRGAKPPA
Ga0180118_11820781	3300020063	Groundwater Sediment	VGWRRTGSFQAPQEILVLTCDVCEKDIGHEDGRRPKTHFEISRLPNAGGIDDQQPPASICSPECLRAYAAGADDPSAPRRKGGSDPPPSRSGS
Ga0180118_13478812	3300020063	Groundwater Sediment	MGWRGTGTFYAAQEILVMTCDVCERDIGHEDGRRPKAHYEITRLPNLGAIDHQDPPALICSPECLRSFAAQEFGPDKDSPQDEHPTRVKPQK
Ga0210404_106636311	3300021088	Soil	PQEILVMTCDVCERDIGYEDERRPRAHYEVVRLPNPGALDVQNPATYICSPQCLRAFAAKASGEPDRLPPAPVGTKPRAKPTK
Ga0210393_1000995310	3300021401	Soil	MGWRKTGVLRTPDEILVMTCDVCERDIGYADGRRPKPHYEITRLPNQGTMGDQTPIVFVCSPECLRAFAAQASSDPKGLPPRGDTGPAS
Ga0210385_102596612	3300021402	Soil	MGWRKTGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEVTRLPNAGALAEKHPAAYVCSPECLRAFAAKASVEPDRLPPREDGSGSRRKPPG
Ga0210383_109971881	3300021407	Soil	MGWRKTGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEVTRLPNAGAMAEKHPAAYVCSPECLRAFAAKASIEPD
Ga0210394_1000029270	3300021420	Soil	MGWRKTGTFHAPQEILVMTCDVCERDIGYEDERRPRAHYEVTRLPNPGALDVQNPAAYVCSPQCLRAFAAKASGEPDPLKPREGGSRPRGKPTK
Ga0210394_100462016	3300021420	Soil	MGWRKTGTFHAPQEILVMTCDVCERDIGYEDERRPRAHYEVVRLPNPGALDVQNPATYICSPQCLRAFAAKASGEPDRLPPAPVGTKPRAKPT
Ga0210394_100806354	3300021420	Soil	MGWRKTATFHAPQEILVMTCDVCERDIGYEDERRPRAHYEIARLPNLGAIDDRNPVACVCSPECLRAFAAKASSEPDRVPPREGGFNPRS
Ga0210409_100461538	3300021559	Soil	MGWRKTGVLRAPEEILVMTCDVCERDIGYEDGRRPKPHYEITRLPNHGAMGDQAPTVCVCSPECLRAFAAQASSDPKGLPPRGGTGPAT
Ga0210409_112575331	3300021559	Soil	KTGMLRTPEEILVMTCDVCERDIGYEDGRRPRPHYEITQVPNRGGVGDHIPATLVCSPECLRAFAARASHDPEGLPPREGGSGSRT
Ga0224556_10023678	3300024295	Soil	MGWRKTATFHAPQEILVMTCDVCERDIGYEDERRPREHYEIARLHGQRAIDEQNPTAYVCSPQCLRAFAAKASGEADRPPPGDGRFKPRGKPAK
Ga0209109_100039285	3300025160	Soil	MGWRRTGAFYAAQEILVMTCDVCERDIGHEDGRRPKAHYEITRLPNLGAIDHQDPPALICSPECLRSFAAQESGPDTDPPRDEHPTRVKPLK
Ga0209890_101942782	3300026291	Soil	MMGWRKTGTYHAPQEILVMTCDVCERDIGYEDERRPRAHYEVARLPNPGAIDEQNPAIYVCSPQCLRAFSAKESGEPDRLPPRDGAFKPRGKPSK
Ga0209733_10274322	3300027591	Forest Soil	MGWRKTGTFHAPQEIMVMTCDVCERDIGYEDERRPRAHFEIARRPNPGAMDEQNPAVYVCSAQCLRAFAAKPSGEPDWLPPREGGSKPGGKPPK
Ga0209733_11115872	3300027591	Forest Soil	MGWRKTGTFHAPQEILVMTCDVCERDIGYEDGSRPRAHYEIARLPNPGALDEQNPAAYVCSPECLRAFAAKESTKPDHLPPREEGSKPHGKPRTKL
Ga0209736_10240835	3300027660	Forest Soil	MGWRKTGTFHAPQEIMVMTCDVCERDIGYEDERRPRAHFEIARRPNPGAMDEQNPAVYVCSAQCLRAFAAKPSGEPDWLPPRE
Ga0209274_103415742	3300027853	Soil	MGWRKTGVLRAPEEILVMTCDVCERDIGYADGRRPRPHYEITRLPNQGTMGDQTPLVHVCSPECLRAFAAQASTDPKGLPPRGGTAPPA
Ga0209167_105454361	3300027867	Surface Soil	GIMGWRKTGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEVTRLPNAGALADKRPAAYVCSPECLRAFAAKASIEPDRLPPREDGSGSRRKPPG
Ga0209380_102643381	3300027889	Soil	MGWRKTGVLRAPEEILVMTCDVCERDIGYEDGRRPRPHYEINRLPNQAGLGDPTPAAYICSPECLRAFAAQASNDPKGLPPREGGSTPG
Ga0209624_100045462	3300027895	Forest Soil	MTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQSPAAYVCSPECLRAFAAKASSNPDALPPRGAGSKPPGKPPS
Ga0209624_100468263	3300027895	Forest Soil	MGWRKTGTFHAPQEILIMTCDVCERDIGYEDERRPRAHYEVVRLPNPGALDVQNPATYICSPQCLRAFAAKASGEPDRQPPAPVGAKPRAKPTK
Ga0209624_100558562	3300027895	Forest Soil	MGWRKTATFHAPQEILVMTCDVCERDIGYEDERRPRAHYEIARLPNVGAIDDRNPVACVCSPECLRAFAAKASSEPDRVPPREGGFNPRS
Ga0209415_100370383	3300027905	Peatlands Soil	MGWRRTGTFHVPQEVLVMTCDVCERDIGYEDERRPRPHYEIVRLPHPGALHEQTTAAYVCSPECLRAFAAKASSEPDRLPPR
Ga0209006_100396564	3300027908	Forest Soil	MGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEVTRLPNAGALADKHPAAYVCSPECLRAFAAKASIEPDRLPPREDGSGSRRKPPG
Ga0302234_100145024	3300028773	Palsa	MGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEITRLPNPGAMPEKHPAAYVCSPECLRAFAAKASTDPDRLPPREGGSATRGKSPT
Ga0302234_101038032	3300028773	Palsa	MGWRKTGSFLAPQEILVMTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQNAAAYVCSPECLRAFAAKASSNPDGLPPRGSGSKPRGKPPI
Ga0302225_101305073	3300028780	Palsa	GLFHAPQEILVMTCDVCERDIGYEDERRARAHYEITRLPNPGAMPEKHPAAYVCSPECLRAFAAKASTDPDRLPPREGGSATRGKSPT
Ga0302225_101931413	3300028780	Palsa	MGWRKTGSFLAPQEILVMTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQNAAAYVCSPECLRAFAAKASSN
Ga0311369_114565601	3300029910	Palsa	SRPRVPIMGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEITRLPNPGAMPEKHPAAYVCSPECLRAFAAKASTDPDRLPPREGGSATRGKSPT
Ga0302184_100299353	3300030490	Palsa	EILVMTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQNAAAYVCSPECLRAFAAKASSNPDGLPPRGSGSKPRGKPPI
Ga0311370_106157983	3300030503	Palsa	MGWRKTAKFHAPQEILVMTCDVCERDIGYEDERRPRAHYEIARLPSPRAMDEKNPNAYVCSPQCLRAFAAKASGEPDRLSPRDGRFKPRGKPAK
Ga0311372_106383872	3300030520	Palsa	MGWRKTGSFHAPQEILVMTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAAGASSGPDRLPPRDPGDPPRGAKPPA
Ga0311357_118138772	3300030524	Palsa	PQAILVMTCDVCERDIGYEDERRARAHYEITRLPNPGTMADQHPAYVCSPECLRAFAAKASTEPDRLPPREGGSGARGKSPS
Ga0302311_105755921	3300030739	Palsa	RWPRRSPSPFSSRRRVAIMGWRKTAKFHAPQEILVMTCDVCERDIGYEDERRPRAHYEIARLPSPRAMDEQNPNAYVCSPQCLRAFAAKASGEPDRLSPRDGRFKPRGKPAK
Ga0265762_10372121	3300030760	Soil	MGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEITRLPNPGAMADQHPAANVCSPECLRAFAAKASTEPDRLPPREGGSAPRGKSSP
Ga0302314_106564253	3300030906	Palsa	MGWRKTGSFHAPQEILVMTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAAGASSGPDRLPPR
Ga0073995_119983592	3300031047	Soil	MGQRKTGLFHAPEEVLVMTCDVCERDIGFEDERRPKAHFRISRLPNLGAIDDQDPPVVVCSRDCLRAFAAKTSGPNRAPADDSTPRKPRK
Ga0302325_101967612	3300031234	Palsa	MTCDVCERDIGFEDGSRPRAHYEITRLPNPGALDVQNPAAYVCSPECLRAFAAKASSSPDGLPPREAGSTPRGKPPI
Ga0302325_105248263	3300031234	Palsa	MGWRKTGVLRTPEEILVMTCDVCERDIGYEDGRRARPHYEIRRLPNQGAIGDQTPAALVCSPECLRAFAAQASHDPKGLPPREGGTGSSE
Ga0302325_108618953	3300031234	Palsa	MGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEITRRPNPGAMADQHPAAYVCSPECLRAFAAKASTEPDRLPPREGGSTPRGKSPT
Ga0302325_119620021	3300031234	Palsa	MGWRNSGMLRAPEQILVMTCDICERDIGHDDGRRPRPHYEIARLPNQGVMDDQAPSVAVCSPECLRAFAARASNDPDGLPAREGGTAEHGKPRS
Ga0302324_1012631681	3300031236	Palsa	MGWRKTAKFHAPQEILVMTCDVCERDIGYEDERRPRAHYEIARLPSPRAMDEQNPNAYVCSPQCLRAFAAKASGEPDRLSPRDGRFKPRGKPAK
Ga0302324_1017283791	3300031236	Palsa	VFMGWRKTGSFHAPQEILVMTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAAGASSGPDRLPPRDPGDPPRGAKPPA
Ga0265316_112652781	3300031344	Rhizosphere	MGWRKTGTFHAPQETLVMTCDVCERDIGYEDERRPRPHYEVSRLPNPRVMEEQNPAVCVCSPQCLRAYAARESDDPDRSPPYIR
Ga0302320_105097492	3300031524	Bog	MTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAASAASRSDRLPPRNPGDPPRGAKPPA
Ga0302326_105810171	3300031525	Palsa	MGWRKTGSFHAPQEILVMTCDVCECDIGYQDERRPRAHYEVARLPNAGAPGEQHPASYVCSEQCLRAFAAGASSGP
Ga0302326_120904582	3300031525	Palsa	MLRAPEQILVMTCDICERDIGHDDGRRPRPHYEIARLPNQGVMDDQAPSVAVCSPECLRAFAARASNDPDGLPAREGGTAEHGKPRS
Ga0302326_121765162	3300031525	Palsa	MTCDVCERDIGYEDERRPRAHYEITRLPNPGAMADQHPAAYVCSPECLRAFAAKASTEPDRLPPREGGSAPRGKSSP
Ga0302326_129545741	3300031525	Palsa	PFISRPRVAIMGWRKTGLFHAPQEILVMTCDVCERDIGYEDERRARAHYEITRRPNPGAMADQHPAAYVCSPECLRAFAAKASTEPDRLPPREGGSTPRGKSPT
Ga0310686_1069059832	3300031708	Soil	MGWRKTGKFHAPQEILVMTCDVCERDIGHEDERRPRAHYEVARLPSPRAIDEQNPSAYVCSPQCLRAFAAKASGEPDRLPPRDGRFKPRAKPTK
Ga0310686_1189305343	3300031708	Soil	VMTCDVCERDIGYEDERRARAHYEITRRPNPGAMADQHPAAYVCSPECLRAFAAKASTEPDRLPPREGGSTPRGKSPT
Ga0310686_1196930333	3300031708	Soil	MGWRKSGLFHAPQEILVMTCDVCERDIGYEDERRARAHFEITRLPNPGAMPEKHPAAYVCSPECLRAFAAKASTEPDRLPPREGGPAPRGKSPS
Ga0307474_101574272	3300031718	Hardwood Forest Soil	MGWRKTGVLRTPDEILVMTCDVCERDIGYADGRRPKPHYEIARLPNQGAMGDQTPIVFVCSPECLRAFAAQASSDPKGLPPRGDTGPAT
Ga0214473_101557313	3300031949	Soil	MGWRRTGAFYAAQEILVMTCDVCERDIGHEDGRRPKAHYEITRLPNLGAIDHQDPPALICSPECLRSFAAQDSGPDEDPPRDEHPTRVKPQK
Ga0348332_134804192	3300032515	Plant Litter	MGWRKTGVLRTPEEILVMTCDVCERDIGHGDGRRPRPHYEITRLPNQGTMGDQTPAVFVCSPECLRAFAAQASHDPKGLPPREGGTGSGT
Ga0335078_112766512	3300032805	Soil	MGWRKTGVMRAPEEIQVMTCDVCERDIGYEDGRRPRPHYEITRLPNQGGMGDQKPAVFVCSPECLRAFAAQASADPRGLPPRGGSTTSTD
Ga0335080_100622423	3300032828	Soil	MGWRKTGEWRAPEEILVMTCDVCERDIGYEDGRRPRAHYEIVRLPNQGAMGDQAPAVFVCSPECLRAFASQASSDPKGLPPRGGST
Ga0335069_103880041	3300032893	Soil	MGWRKTGAWRAPEEILVMTCDVCERDIGYEDGRRPRPHYQITRLPNQGAMGEQAPTVSVCSPECLRSFAIQASSDPTGLPLRGSTGPGASGRIPE
Ga0335074_102253312	3300032895	Soil	MAWRRTGVLRNPEEILVATCDVCERDIGYEDGRRPRPHYEIRQLPNQGTMGDQAPAVLVCSPECLRAFAARASHDPKGLPPREGGTGSTR
Ga0335072_111502892	3300032898	Soil	KAKRPGRHCDTLVNVLTQDERSLEVMGWRKTGKLHTPEEILVMTCDVCERDIGYEDGRRARPHYEIAQLPNQGTMGDQAPGVFVCSPECLRAFAARASSDPKGLPPREGGSGSPTS
Ga0335073_102039252	3300033134	Soil	MGWRKTGEFRSPEEILVMTCDLCERDIGYEDGRRARPHYEIRRLPNQGTMGDQAPAVFVCSPECLRAFAAQASHDPKGLPPREDGTGPAA
Ga0335073_108041173	3300033134	Soil	LTQDERSLEVMGWRKTGKLHTPEEILVMTCDVCERDIGYEDGRRARPHYEIAQLPNQGTMGDQAPGVFVCSPECLRAFAARASSDPKGLPPREGGSGSPTS
Ga0335077_105868393	3300033158	Soil	MGWRKTGVLRAPEEILVMTCDVCERDIGYEDGRRARPHYEITRLPNQGTMGDQTPAVFVCSPECLRAFAARASHDPKGLPPREGGTGSTT
Ga0335077_106063652	3300033158	Soil	MGWRKTGLLRAPEEVLVMTCDICERDIGYEDGRRPRPHYEIARLPNPGTMGDQTPAVFVCSPECLRAFAARASISRNGLPPREGGIGPAT
Ga0326727_103488322	3300033405	Peat Soil	MGWRKTGHLQPPQEIQVMTCDVCERDIGHEDGRRPRGHYEIRRLPHSTTFDGRDASVCVCSSECLRAFAARVSSEPDGLPPRDATSV
Ga0316605_123891721	3300033408	Soil	MGWRRTGQFQPAEEILVMTCDVCERDIGSGDGRRPRAHFEISRVPNPGALNDPDPRTFVCSAACLRAFAASTPEPERDSHFYERPTRTEGS
Ga0334850_000033_3784_4068	3300033828	Soil	MGWRKSGLFHPRQEILVMTCDVCERDIGYEDERRPRAHYEITRLPNPGAMADQHPAAYVCSPECLRAFAAKASTEPDRLPPREGGSAPRGKSSP
Ga0370483_0000069_31817_32101	3300034124	Untreated Peat Soil	MGWRKTGTFHAPQEILVMTCDVCERDIGYEDERRPRAHYEITRLPNPGAMADKHPAAYVCSPECLRAFAAKASSEPHRLPPREGGPAPRGKAPG
Ga0370483_0099739_18_302	3300034124	Untreated Peat Soil	MGWRKTGSFLAPQEILVMTCDVCERDIGFEDGSRPRAHYEIARLPNPGALHEQNAAAYVCSPECLRAFAAKASTNPDGLPPRGSGSKPRGKPPI
Ga0370483_0111690_195_479	3300034124	Untreated Peat Soil	MGWRKTGTFHAPQEIMLMTCDVCERDIGYEDERRPRAHYEIARLPSPRAIDEQNPTTYVCSPQCLRAFAAKASGQPDRVPPREGRFKPRAKPTK
Ga0370514_000134_14914_15147	3300034199	Untreated Peat Soil	MTCDVCERDIGYEDERRPRAHYEITRLPNPGAMADKHPAAYVCSPECLRAFAAKASSEPHRLPPREGGPAPRGKAPG
Ga0370514_031549_906_1190	3300034199	Untreated Peat Soil	MGWRKTGKFHAPQEILVMTCDVCERDIGYEDERRPRAHYEVARLPSPRAIDEQNPSAYVCSPQCLRAFAAKASGEPDRLPPREARFKPRGKPSK
Ga0370514_059566_551_835	3300034199	Untreated Peat Soil	MGWRKTGTFHAPQEIMLMTCDVCERDIGYEDERRPRAHYEIARLPSPRAIDEQNPITYVCSPQCLRAFAAKASGEPDRVPPREGRFKPRAKPTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057532

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences