Metagenome Family F057510

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057510
Family Type	Metagenome
Number of Sequences	136
Average Sequence Length	47 residues
Representative Sequence	PSPKPNKVNPKQRKKNVDIFGFKLSGLSELQDTLGIFLIFKNII
Number of Associated Samples	121
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	88.24 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.941 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater (16.177 % of family members)
Environment Ontology (ENVO)	Unclassified (66.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.971 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.22% β-sheet: 0.00% Coil/Unstructured: 52.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF01523	PmbA_TldD	5.15
PF13450	NAD_binding_8	5.15
PF07690	MFS_1	1.47
PF05099	TerB	1.47
PF04134	DCC1-like	0.74
PF02588	YitT_membrane	0.74
PF13231	PMT_2	0.74
PF00463	ICL	0.74
PF00903	Glyoxalase	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	5.15
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	1.47
COG1284	Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains	Function unknown [S]	0.74
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.74
COG2364	Uncharacterized membrane protein YczE	Function unknown [S]	0.74
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.94 %
Unclassified	root	N/A	47.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	35.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	35.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	34.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.06 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	16.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10233912	Not Available	546	Open in IMG/M
3300000254\|SI34jun09_100mDRAFT_1063964	Not Available	576	Open in IMG/M
3300000255\|LP_F_10_SI03_135DRAFT_1030136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	913	Open in IMG/M
3300001346\|JGI20151J14362_10148515	Not Available	706	Open in IMG/M
3300001947\|GOS2218_1031617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	6492	Open in IMG/M
3300001963\|GOS2229_1062984	Not Available	848	Open in IMG/M
3300001969\|GOS2233_1008828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1796	Open in IMG/M
3300003619\|JGI26380J51729_10129364	Not Available	541	Open in IMG/M
3300003620\|JGI26273J51734_10031108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1893	Open in IMG/M
3300004097\|Ga0055584_101495131	Not Available	701	Open in IMG/M
3300004278\|Ga0066609_10024177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2203	Open in IMG/M
3300005424\|Ga0066826_10175545	Not Available	749	Open in IMG/M
3300005429\|Ga0066846_10052250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1458	Open in IMG/M
3300005430\|Ga0066849_10367804	Not Available	544	Open in IMG/M
3300005837\|Ga0078893_11897513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	826	Open in IMG/M
3300006193\|Ga0075445_10272783	Not Available	576	Open in IMG/M
3300006336\|Ga0068502_1055480	Not Available	554	Open in IMG/M
3300007630\|Ga0102903_1015162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2163	Open in IMG/M
3300007639\|Ga0102865_1201784	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300007692\|Ga0102823_1097017	Not Available	782	Open in IMG/M
3300007981\|Ga0102904_1085554	Not Available	730	Open in IMG/M
3300007992\|Ga0105748_10208566	Not Available	813	Open in IMG/M
3300008964\|Ga0102889_1116929	Not Available	787	Open in IMG/M
3300008964\|Ga0102889_1162592	Not Available	653	Open in IMG/M
3300009054\|Ga0102826_1057807	Not Available	939	Open in IMG/M
3300009058\|Ga0102854_1069451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1007	Open in IMG/M
3300009080\|Ga0102815_10250226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	977	Open in IMG/M
3300009080\|Ga0102815_10767637	Not Available	547	Open in IMG/M
3300009141\|Ga0102884_1047681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1069	Open in IMG/M
3300009420\|Ga0114994_10608906	Not Available	716	Open in IMG/M
3300009425\|Ga0114997_10748835	Not Available	509	Open in IMG/M
3300009472\|Ga0115554_1211902	Not Available	783	Open in IMG/M
3300009476\|Ga0115555_1426872	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300009495\|Ga0115571_1066336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1627	Open in IMG/M
3300009505\|Ga0115564_10617315	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300009508\|Ga0115567_10764665	Not Available	577	Open in IMG/M
3300009544\|Ga0115006_10581219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	982	Open in IMG/M
3300009705\|Ga0115000_10044819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3045	Open in IMG/M
3300009705\|Ga0115000_10382087	Not Available	899	Open in IMG/M
3300009705\|Ga0115000_10741678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	605	Open in IMG/M
3300009705\|Ga0115000_10873288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	550	Open in IMG/M
3300009785\|Ga0115001_10139796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1581	Open in IMG/M
3300010883\|Ga0133547_10043563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	10680	Open in IMG/M
3300017717\|Ga0181404_1181231	Not Available	504	Open in IMG/M
3300017725\|Ga0181398_1066474	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300017735\|Ga0181431_1013860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1906	Open in IMG/M
3300017740\|Ga0181418_1031600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1353	Open in IMG/M
3300017749\|Ga0181392_1070255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1060	Open in IMG/M
3300017752\|Ga0181400_1013622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2770	Open in IMG/M
3300017755\|Ga0181411_1226670	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300017773\|Ga0181386_1219744	Not Available	567	Open in IMG/M
3300017781\|Ga0181423_1022640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2568	Open in IMG/M
3300017783\|Ga0181379_1296692	Not Available	550	Open in IMG/M
3300017786\|Ga0181424_10176072	Not Available	912	Open in IMG/M
3300017786\|Ga0181424_10472496	Not Available	504	Open in IMG/M
3300018036\|Ga0181600_10380227	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300019765\|Ga0194024_1152039	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300020269\|Ga0211484_1017056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1487	Open in IMG/M
3300020288\|Ga0211619_1003070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	3295	Open in IMG/M
3300020319\|Ga0211517_1057628	Not Available	763	Open in IMG/M
3300020345\|Ga0211706_1093956	Not Available	606	Open in IMG/M
3300020358\|Ga0211689_1148095	Not Available	652	Open in IMG/M
3300020365\|Ga0211506_1203577	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300020388\|Ga0211678_10294705	Not Available	661	Open in IMG/M
3300020396\|Ga0211687_10179194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	865	Open in IMG/M
3300020413\|Ga0211516_10549400	Not Available	500	Open in IMG/M
3300020417\|Ga0211528_10296890	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300020431\|Ga0211554_10385577	Not Available	650	Open in IMG/M
3300020446\|Ga0211574_10508802	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300020448\|Ga0211638_10448006	Not Available	607	Open in IMG/M
3300020452\|Ga0211545_10452088	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300021087\|Ga0206683_10407006	Not Available	680	Open in IMG/M
3300021089\|Ga0206679_10032615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3248	Open in IMG/M
3300021185\|Ga0206682_10403394	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300021347\|Ga0213862_10137806	Not Available	858	Open in IMG/M
3300021365\|Ga0206123_10076160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1652	Open in IMG/M
3300021365\|Ga0206123_10312047	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300021389\|Ga0213868_10218453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1132	Open in IMG/M
3300021957\|Ga0222717_10723976	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300021959\|Ga0222716_10140941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1584	Open in IMG/M
3300021959\|Ga0222716_10618896	Not Available	588	Open in IMG/M
3300024185\|Ga0228669_1075843	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300024192\|Ga0228637_1067843	Not Available	715	Open in IMG/M
3300024228\|Ga0228633_1135689	Not Available	553	Open in IMG/M
3300024230\|Ga0228638_1024966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1776	Open in IMG/M
3300024231\|Ga0233399_1031778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1507	Open in IMG/M
3300024237\|Ga0228653_1012704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2027	Open in IMG/M
3300024237\|Ga0228653_1129130	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300024250\|Ga0228677_1003183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2789	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10302350	Not Available	690	Open in IMG/M
3300024293\|Ga0228651_1032523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1282	Open in IMG/M
3300024296\|Ga0228629_1046253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1178	Open in IMG/M
3300024313\|Ga0228624_1022685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1426	Open in IMG/M
3300024322\|Ga0228656_1128421	Not Available	531	Open in IMG/M
3300024328\|Ga0228635_1128950	Not Available	545	Open in IMG/M
3300024348\|Ga0244776_10961620	Not Available	501	Open in IMG/M
3300024420\|Ga0228632_1071348	Not Available	813	Open in IMG/M
3300024428\|Ga0233396_1107054	Not Available	664	Open in IMG/M
3300025660\|Ga0209045_1197688	Not Available	542	Open in IMG/M
3300025694\|Ga0209406_1150971	Not Available	736	Open in IMG/M
3300025729\|Ga0209558_1171289	Not Available	712	Open in IMG/M
3300025767\|Ga0209137_1149918	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300025830\|Ga0209832_1046696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1574	Open in IMG/M
3300025869\|Ga0209308_10227617	Not Available	812	Open in IMG/M
3300025870\|Ga0209666_1176151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	943	Open in IMG/M
3300025880\|Ga0209534_10494330	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300025886\|Ga0209632_10069766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2155	Open in IMG/M
3300025886\|Ga0209632_10292181	Not Available	816	Open in IMG/M
3300025886\|Ga0209632_10523402	Not Available	536	Open in IMG/M
3300025894\|Ga0209335_10293382	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300025894\|Ga0209335_10329750	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300027170\|Ga0208963_1039597	Not Available	745	Open in IMG/M
3300027672\|Ga0209383_1139257	Not Available	765	Open in IMG/M
3300027839\|Ga0209403_10557074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	566	Open in IMG/M
3300028126\|Ga0228648_1117938	Not Available	517	Open in IMG/M
3300028128\|Ga0228645_1030738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1188	Open in IMG/M
3300028130\|Ga0228619_1003294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	6559	Open in IMG/M
3300028131\|Ga0228642_1045326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1206	Open in IMG/M
3300028194\|Ga0257106_1217509	Not Available	650	Open in IMG/M
3300028418\|Ga0228615_1062654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1089	Open in IMG/M
3300031696\|Ga0307995_1097300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1150	Open in IMG/M
3300031702\|Ga0307998_1204750	Not Available	665	Open in IMG/M
3300031721\|Ga0308013_10301770	Not Available	562	Open in IMG/M
3300031766\|Ga0315322_10312016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1072	Open in IMG/M
3300031766\|Ga0315322_10338070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1020	Open in IMG/M
3300031766\|Ga0315322_10546337	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300031773\|Ga0315332_10340945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	963	Open in IMG/M
3300031775\|Ga0315326_10745262	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300031785\|Ga0310343_11080806	Not Available	606	Open in IMG/M
3300031851\|Ga0315320_10619889	Not Available	707	Open in IMG/M
3300031851\|Ga0315320_10926446	Not Available	533	Open in IMG/M
3300031886\|Ga0315318_10644712	Not Available	598	Open in IMG/M
3300032073\|Ga0315315_11528402	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.26%
Freshwater	Environmental → Aquatic → Freshwater	0.74%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	25.74%
Coastal	Environmental → Aquatic → Marine → Coastal	18.38%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.65%
Oceanic	Environmental → Aquatic → Marine → Oceanic	13.97%
Strait	Environmental → Aquatic → Marine → Strait	8.82%
Pelagic	Environmental → Aquatic → Marine → Pelagic	7.35%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.62%
River	Environmental → Aquatic → Freshwater → River	0.74%
Inlet	Environmental → Aquatic → Marine → Inlet	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	18.38%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.65%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	16.18%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	11.76%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.82%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.82%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	7.35%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.62%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.47%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.74%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.74%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.74%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.74%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	16.18%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	13.24%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	10.29%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	8.82%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.82%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.82%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	7.35%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	5.88%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	5.88%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.21%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.21%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.47%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.47%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.74%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.74%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.74%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.74%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.74%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.74%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.74%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.74%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.74%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000254	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 100m	Environmental	Open in IMG/M
3300000255	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_135	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001947	Marine microbial communities from the Gulf of Maine, Canada - GS002	Environmental	Open in IMG/M
3300001963	Marine microbial communities from Nags Head, North Carolina, USA - GS013	Environmental	Open in IMG/M
3300001969	Marine microbial communities from Yucatan Channel, Mexico - GS017	Environmental	Open in IMG/M
3300003619	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004278	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_150m	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005429	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006305	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300007981	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300009054	Estuarine microbial communities from the Columbia River estuary - metaG S.737	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009110	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009141	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020269	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)	Environmental	Open in IMG/M
3300020280	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX556044-ERR599114)	Environmental	Open in IMG/M
3300020288	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556132-ERR599045)	Environmental	Open in IMG/M
3300020319	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX556039-ERR599073)	Environmental	Open in IMG/M
3300020345	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX556079-ERR599137)	Environmental	Open in IMG/M
3300020358	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)	Environmental	Open in IMG/M
3300020365	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300020446	Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300024185	Seawater microbial communities from Monterey Bay, California, United States - 84D	Environmental	Open in IMG/M
3300024192	Seawater microbial communities from Monterey Bay, California, United States - 47D	Environmental	Open in IMG/M
3300024228	Seawater microbial communities from Monterey Bay, California, United States - 41D	Environmental	Open in IMG/M
3300024230	Seawater microbial communities from Monterey Bay, California, United States - 48D	Environmental	Open in IMG/M
3300024231	Seawater microbial communities from Monterey Bay, California, United States - 43D	Environmental	Open in IMG/M
3300024237	Seawater microbial communities from Monterey Bay, California, United States - 65D	Environmental	Open in IMG/M
3300024250	Seawater microbial communities from Monterey Bay, California, United States - 58D_r	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024293	Seawater microbial communities from Monterey Bay, California, United States - 63D	Environmental	Open in IMG/M
3300024296	Seawater microbial communities from Monterey Bay, California, United States - 36D	Environmental	Open in IMG/M
3300024313	Seawater microbial communities from Monterey Bay, California, United States - 29D	Environmental	Open in IMG/M
3300024322	Seawater microbial communities from Monterey Bay, California, United States - 68D	Environmental	Open in IMG/M
3300024328	Seawater microbial communities from Monterey Bay, California, United States - 44D	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024420	Seawater microbial communities from Monterey Bay, California, United States - 40D	Environmental	Open in IMG/M
3300024428	Seawater microbial communities from Monterey Bay, California, United States - 32D	Environmental	Open in IMG/M
3300025660	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_10m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025729	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_150m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025830	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025870	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300027170	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C43A7_35 (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027839	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)	Environmental	Open in IMG/M
3300028126	Seawater microbial communities from Monterey Bay, California, United States - 60D	Environmental	Open in IMG/M
3300028128	Seawater microbial communities from Monterey Bay, California, United States - 57D	Environmental	Open in IMG/M
3300028130	Seawater microbial communities from Monterey Bay, California, United States - 22D	Environmental	Open in IMG/M
3300028131	Seawater microbial communities from Monterey Bay, California, United States - 53D	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300028418	Seawater microbial communities from Monterey Bay, California, United States - 16D	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M
3300031766	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_102339122	3300000117	Marine	PEAETINKPSPKPNKVNPKQRKKDVDIFGFKLSGLSELQDTLGIFLIFKNIIY*
SI34jun09_100mDRAFT_10639641	3300000254	Marine	NPRHKKKKVEIFGLRFNGFSELQYTLGIFLIFKNIF*
LP_F_10_SI03_135DRAFT_10301361	3300000255	Marine	KQRKKNVDIFGLKLSGFSELQDTLGIFLIFKNIV*
JGI20151J14362_101485151	3300001346	Pelagic Marine	RPASTLHGDAPEAETINKPSPKPNKVNPKQRKKNVDIFGFKLGLSELQYTLGIFLIFKNIIQ*
GOS2218_10316171	3300001947	Marine	KSPSPKPKIINPRQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS*
GOS2229_10629841	3300001963	Marine	PKPNKVNPKQRKKNVDIFGFKLSGLPELQDTLGIFLIFKNII*
GOS2233_10088281	3300001969	Marine	LKPKHKKKKVDSLGFKFRGFSELHETLGIFLIFRNIIHLI*
JGI26380J51729_101293641	3300003619	Marine	NKVNPRHKKKKVEIFGLRFNGFSELQYTLGIFLIFKNIF*
JGI26273J51734_100311081	3300003620	Marine	RHKKKKVEIFGLRFNGFSELQYTLGISLIFKNIFSINYFF*
Ga0055584_1014951312	3300004097	Pelagic Marine	TLHGDAPEAETINKPSPKPNKVNPKQRKKDVDIFGFKLSGLSELQDTLGIFLIFKNIIY*
Ga0066609_100241774	3300004278	Marine	LQGDAPEAETINKPSPKPNKVNPKQRKKNVDIFGLKLSGFSELQDTLGIFLIFKNIV*
Ga0066826_101755451	3300005424	Marine	NPNRDKPKHKKKKVDNLGLRFNGLFELQDTLGIFLIVKNIF*
Ga0066846_100522501	3300005429	Marine	VSPKQRKNNVEILGFKLSGLSELQDTFGIFLICKNISNKILLL*
Ga0066849_103678041	3300005430	Marine	AETINKPSPKPNKVNPKQRKKNVDIFGLKLSGFSELQDTLGIFLIFKNIV*
Ga0078893_118975132	3300005837	Marine Surface Water	KPKHKKKKVDNLGLRFNGLFELQDTLGIFLIVKNIF*
Ga0075445_102727832	3300006193	Marine	INKPSPRPNKIRPKHKKNIVEVFGFKLRGLVELHKTFGIFLIFKNIN*
Ga0068468_11391603	3300006305	Marine	SPKPNKVNPKQRKNNVDNFGFKLKVSSELHETFGIFLIVRNI*
Ga0068502_10554801	3300006336	Marine	TKPKHKKKKVNNLGLKFNGLFELQDTLGIFLIVKNII*
Ga0102903_10151624	3300007630	Estuarine	VEIFGLRFSGFSELQYTLGIFLIFKNIFSINYFF*
Ga0102865_12017842	3300007639	Estuarine	ETIKSPSPKPKIINPIQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS*
Ga0102823_10970171	3300007692	Estuarine	TINNPSPRPNKTNPRHKKKKVEIFGLRFNGFSELQYTLGISLIFKNIFSINYFF*
Ga0102904_10855541	3300007981	Estuarine	KKKVEIFGLRFNGFSELQYTLGISLIFKNIFSINYFF*
Ga0105748_102085661	3300007992	Estuary Water	KQRKKNVDIFGFKLSGLSELQDTLGIFLIFKNII*
Ga0102889_11169291	3300008964	Estuarine	KKKKVEIFGLRFNGFSELQYTLGISLILKNIFSINYFF*
Ga0102889_11625922	3300008964	Estuarine	EAETINKPSPKPNKVNPKQRKKNVDIFGLKLSGFSELQDTLGIFLIFKNIV*
Ga0102826_10578071	3300009054	Estuarine	QGYVQSKSSINYPSPKPKIVNPRKKKKKVDIFGLKFSDFSELQYTLGIFLIFKNIF*
Ga0102854_10694511	3300009058	Estuarine	NKIKPKQRKKEVDIFGFKLNGLSELQDTLGIFLIFKNII*
Ga0102815_102502261	3300009080	Estuarine	PNKVNPRHKKKKVEIFGLRFNGFSELQYTLGIFLIFKNIF*
Ga0102815_107676371	3300009080	Estuarine	NKVNPRHRKKKVENFGLRFNGFSELQETLGIFLIFKNIFLIKYFF*
Ga0117925_11390322	3300009110	Marine	NPSPNPNKVSPKHKNKKVDIFGLRFNGFLELQETLGIFFNDKNIFF*
Ga0102884_10476813	3300009141	Estuarine	HRKNEVEIYGFKFNGLSELQYTFGIFLIFRNITIK*
Ga0114994_106089061	3300009420	Marine	INEITNKPSPKPNKVSPKHKKNKVDSFGFKLKGLVELHDTLGISFIFKNID*
Ga0114997_107488352	3300009425	Marine	AKETINNPSPKPNKVNPRHKKKKVEIFGLRFNGFLELQYTLGIFLIFKNIFSINYFF*
Ga0115554_12119022	3300009472	Pelagic Marine	PNKTNPRHKKKKVEIFGLRFNGLSELQETLGIFLIFKNIFLIKYFF*
Ga0115555_14268721	3300009476	Pelagic Marine	INKPSPKPNKVNPKQRKKDVDIFGFKLSGLSELQDTLGIFLIFKNIIY*
Ga0115571_10663361	3300009495	Pelagic Marine	ETIKSPSPKPKIINPRQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS*
Ga0115564_106173151	3300009505	Pelagic Marine	KPSPKPNKVNPKQRKKNVDIFGFKLSGLSELQDTIGIFLIFKNII*
Ga0115567_107646651	3300009508	Pelagic Marine	KKKVENFGLRFNGFSELQETLGIFLIFKNIFLIKYFF*
Ga0115006_105812191	3300009544	Marine	VNPRHKKRKVEILGLRFNGFSELQYTLGIFLIFKNIF*
Ga0115000_100448191	3300009705	Marine	RTDHGEAPAKETINKPSPKPKKINPRHRKKKVENFGLRFNGFSELQDTLGMFLIFKNIFLIKYFF*
Ga0115000_103820871	3300009705	Marine	TFQGDAPIVEMINKPSPKPNKVSPKHKINKVEGFGFKLKGLVELHDTLGIFFIFKNID*
Ga0115000_107416782	3300009705	Marine	PKPNKARPSDKKKNVEIFGLRFSGFSELHDTLGIFLIDKNIC*
Ga0115000_108732881	3300009705	Marine	KPNKARPSDKKKNVEIFGLRFSGFSELQYTLGIFLIDKNIF*
Ga0115001_101397961	3300009785	Marine	PIDKKKNVEIFGLRFSGFSELQDTLGIFLIDKNIC*
Ga0133547_100435631	3300010883	Marine	VNETINKPSPRPNKVRPKHKKNKVESFGFKLKGLVELHETFGIFLIFKNIN*
Ga0181404_11812311	3300017717	Seawater	RKNTLQGEAPDAETINNPSPKPKIINPKHKKKEVEIFGFKFNGLCELQYTFGISLIFRNITDK
Ga0181398_10664741	3300017725	Seawater	KPXANTLQGDAPDAETINKPSPKPNRVKPKQRKKNVEIFGFKFSGFSELHETFGIFLIFKNI
Ga0181431_10138601	3300017735	Seawater	DAPEAETINKPSPKPNKVSPKQRKKDVDIFGFKLSGLTELHDTLGIFLIFKNII
Ga0181418_10316001	3300017740	Seawater	PRQRKKEVEALGCKFNGLSELHDTLGIFLIFKNIS
Ga0181392_10702551	3300017749	Seawater	NPKQRKKNVDIFGFKLSGLSELQDTFGIFLIFKNII
Ga0181400_10136224	3300017752	Seawater	KVNPKQRKKNVDIFGFKLSGLSELHDTLGIFLIFKNIV
Ga0181411_12266701	3300017755	Seawater	NTLQGEAPDAETIKSPSPKPKIINPRQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS
Ga0181386_12197441	3300017773	Seawater	SLNPNRVSPKQRKKNVDIFGLKLSGLSELQDTFGIFLIFKNII
Ga0181423_10226401	3300017781	Seawater	DHGDAPEAETINKPSPKPNKVSPKQRKKDVDIFGLKLSGLTELQDTLGIFLIFKNIF
Ga0181379_12966921	3300017783	Seawater	VNPKQRKKNVDIFGFKLSGFSELHDTFGIFLIFKNII
Ga0181424_101760721	3300017786	Seawater	KVNPRHRKKKVESFGLRFNGFSELQDTLGIFLIFKNIFLIKYFF
Ga0181424_104724961	3300017786	Seawater	GEAPTKETINKPSPKPNKVNPRHRKKKVENFGLRFNDLSELQDTSGIFLIFKNIF
Ga0181600_103802271	3300018036	Salt Marsh	GDAPDAETINKPSPKPNKVKPKQRKKNVEIFGLKFNGFSELHETFGIFLILRNIF
Ga0194024_11520392	3300019765	Freshwater	PSPKPNKVNPKQRKKNVDIFGFKLSGLSELQDTLGIFLIFKNII
Ga0211484_10170564	3300020269	Marine	KPSPIPKRVNPKQRKKKVLIFGLKFKGSLELHDTLGIFLIVKNII
Ga0211591_10623501	3300020280	Marine	PMPNKLKPKHKKKKVDSLGFKFRGFSELHETLGIFLIFRNIIYLI
Ga0211619_10030705	3300020288	Marine	LHGEAPVNETKSKPSPIPKRVNPKQRKKKVLIFGLKFKGSLELHDTLGIFLIVKNII
Ga0211517_10576281	3300020319	Marine	IPIETFKLIEMPSASTLHGELPVVETINKPSPKPKKTSPKQRKKDVKNFGLKFSGFFELQVFLGIFFIVKNI
Ga0211706_10939562	3300020345	Marine	KHKKKKVENLGLKLYGFLELHDTLGIFLIFKNIYFLINYF
Ga0211689_11480951	3300020358	Marine	PKPKKKKVEILGFKFKGFSELQDTLGIFLIFKNIFFQ
Ga0211506_12035771	3300020365	Marine	SPNPNNVKPKQRKKNVEIFGFKFSGFSELHETFGIFLICKNILIKYFFYY
Ga0211678_102947051	3300020388	Marine	AKETISKPSPKPNKVNPRHRKKKVESFGLRFNGFSELQDTLGIFLIFKNIFFQ
Ga0211687_101791941	3300020396	Marine	PSPKPNKARPSDKKKNVEIFGLRLNGFLELQDTLGIFLIDKNIF
Ga0211516_105494002	3300020413	Marine	PVVDKTKRPSPRPNSINPKQRKKNVENLGLKFKGFSELQVFDGIFLIVKNIL
Ga0211528_102968902	3300020417	Marine	NKVKPKQRKKNVEIFGFKFSGFSELHETFGIFLICKNILIKYFFYY
Ga0211554_103855771	3300020431	Marine	VSPRHRKKKVENFGLRFNGFSELQDTLGIFLIFKNIF
Ga0211574_105088021	3300020446	Marine	IPKRVNPKQRKKKVLIFGLKFKGSLELHDTLGIFLIVKNIL
Ga0211638_104480062	3300020448	Marine	EIPXAKTDHGDAPDNETINKPSPKPNKVNPRHKKKNDETFGFKFSGLSELQDTFGIFLIFKNIFE
Ga0211545_104520881	3300020452	Marine	APEAETINKPSPKPNKVNPKQRKKNVDIFGFKLSGLSELQDTFGIFLIFKNII
Ga0206683_104070061	3300021087	Seawater	NPKQRKKNVDIFGLKLSGFSELQDTLGIFLIFKNIV
Ga0206679_100326151	3300021089	Seawater	PSPKPNKANPKHKKKNVEIFGFKFNGLSELQDTLGIFLIFKNIFK
Ga0206682_104033942	3300021185	Seawater	EAPDAETIKSPSPKPKIINPIQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS
Ga0213862_101378062	3300021347	Seawater	NKVNPKQRKKNVDIFGFKLSGLSELQDTLGIFLIFKNII
Ga0206123_100761601	3300021365	Seawater	NKVNPKQRKKNVDIFGFKLSGLPELQDTLGIFLIFKNII
Ga0206123_103120472	3300021365	Seawater	ETINKPSPKPNKVNPKQRKKNVDIFGFKLSGLPELQDTLGIFLIFKNII
Ga0213868_102184533	3300021389	Seawater	PKQRKKNVDIFGFKLSGLSELQDTFGIFLIFKNII
Ga0222717_107239762	3300021957	Estuarine Water	NPKIINPKHRKKEVEIFGFKFNGLFELQYTFGIFLIFRNITNK
Ga0222716_101409411	3300021959	Estuarine Water	NNPSPKPNRANPQHKKKNVEIFGFKFNGLFELHKTLGTFLIDKNIP
Ga0222716_106188961	3300021959	Estuarine Water	NTLHGDAPEAETINKPSPRPNKVNPKQRKKNVDIFGFRLSGLSELQDTFGIFLIFKNII
Ga0228669_10758432	3300024185	Seawater	NNVNPKQRKKNVDIFGFKLSGLSELQDTIGIFLIFKNII
Ga0228637_10678432	3300024192	Seawater	PKQRKKDVDIFGFKLSGLTELHDTLGIFLIFKNII
Ga0228633_11356892	3300024228	Seawater	SPKPNRANPQHKKKNVEIFGFKFNGLFELHKTLGTFLIDKNIP
Ga0228638_10249661	3300024230	Seawater	TLQGEAPDAETIKSPSPKPKIINPIQRKKEVEALGFKFNGLFELHDTLGIFLIFKNIS
Ga0233399_10317783	3300024231	Seawater	ETINKPSPKPNKVSTKQRKKDVDIFGFKLSGLTELQDTLGIFLIFINII
Ga0228653_10127044	3300024237	Seawater	KVKTKKKKKKVDIFGFKLSGLSELQDTFGIFLIFKNII
Ga0228653_11291301	3300024237	Seawater	TLQGEAPDAETIKSPSPKPKIINPRQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS
Ga0228677_10031831	3300024250	Seawater	TINKPSPKPNKVSPKQRKKDVDIFGFKLSGLTELHDTLGIFLIFKNII
(restricted) Ga0233444_103023502	3300024264	Seawater	TINNPSPKPNKVNPKHKKKNVEIFGFKFKGLFELHKTLGTFLIDKNIS
Ga0228651_10325231	3300024293	Seawater	EAETINKPSPKPNKVSPKQRKKDVDIFGFKLSGLTELHDTLGIFLIFKNII
Ga0228629_10462531	3300024296	Seawater	PKPKIINPRQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS
Ga0228624_10226851	3300024313	Seawater	PIQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS
Ga0228656_11284211	3300024322	Seawater	APEAETINKPSPKPNKVNPKQRKKNVDIFGFKLSGLSELQDTIGIFLIFKNII
Ga0228635_11289502	3300024328	Seawater	KYKPXANTDHGDAPEAETINKPSPKPNKVSPKQRKKDVDIFGFKLSGLTELHDTLGIFLIFKNII
Ga0244776_109616202	3300024348	Estuarine	EAETINKPSPKPNKVNPKQRKKNVDIFGLKLSGFSELQDTLGIFLIFKNIV
Ga0228632_10713482	3300024420	Seawater	GEAPEAETINKPSPKPNKVNPKQRKKNVDIFGFKLSGLSELQDTFGIFLIFKNII
Ga0233396_11070541	3300024428	Seawater	PQHKKKNVDIFGFKFNGLFELHKTLGTFLIDKNIP
Ga0209045_11976882	3300025660	Marine	KVNPKQRKKNVDIFGLKLSGFSELQDTLGIFLIFKNIV
Ga0209406_11509712	3300025694	Pelagic Marine	RTDQGEAPAKETINNPSPRPNKVNPRHKKKKVEIFGLRFNGFSELQYTLGIFLIFKNIF
Ga0209558_11712891	3300025729	Marine	NKVNPKQRKKNVDIFGLKLSGFSELQDTLGIFLIFKNIV
Ga0209137_11499181	3300025767	Marine	ANTLQGEAPDADTINKPSPNPNKVNPKQRKKNVEIFGFKFKGKSELHETLGIFLIFKNISIKYFFY
Ga0209832_10466963	3300025830	Pelagic Marine	KVNPKQRKKNVDIFGFKLSGLSELQDTLGIFLIFKNII
Ga0209308_102276172	3300025869	Pelagic Marine	ARTDQGEAPAKETINNPSPKPNKVNPRHKKKKVEIFGLRFNDFSELQYTLGIFLIFRNIF
Ga0209666_11761511	3300025870	Marine	SPKPNKVNPKQRKKNVDIFGLKLSGFSELQDTLGIFLIFKNIV
Ga0209534_104943302	3300025880	Pelagic Marine	HGDAPEAETINKPSPKPNKVNPKQRKKNVDIFGFKLSGLSELQDTLGIFLIFKNII
Ga0209632_100697661	3300025886	Pelagic Marine	KAKPIHKKRKVEIFGFRLRGFFELQDTLGIFLIFKNIF
Ga0209632_102921811	3300025886	Pelagic Marine	GEAPAKETINKPSPKPNKVNPRHKKKKVENFGLRFNGFSELQETLGIFLIFKNIFVIKYF
Ga0209632_105234022	3300025886	Pelagic Marine	AKPRHKKKKVEVFGFRFNGLSELQETLGIFLIFKNIFF
Ga0209335_102933822	3300025894	Pelagic Marine	ANTLHGEAPEAETINKPSPKPNKVNPKQRKKNVETFGFKLSGLSELQDTLGIFLICKNIGNKILLL
Ga0209335_103297502	3300025894	Pelagic Marine	WSSNTLHGEAPDVETIKRPSPKPNKVSPKQRKKSVEIFGFKFSDLLELQDTFGTFLIFKN
Ga0208963_10395971	3300027170	Marine	PSPKPNKVSPKQRKKDVDIFGFKLSGLTELQDTLGIFLIFKNII
Ga0209383_11392571	3300027672	Marine	ARTDQGDAPAKETINSPSPKPNKSNPRHKKKKVEVFGFKFKGLSELHNTLGIFLIFKNIF
Ga0209403_105570742	3300027839	Marine	PKPNKARPSDKKKNVEIFGLGFSGFLELQDTLGIFLIDKNIC
Ga0228648_11179382	3300028126	Seawater	XANTDHGDAPEVETINKPSPKPNKVSPKQRKKDVDIFGFKLSGLTELQDTLGIFLIFKNI
Ga0228645_10307383	3300028128	Seawater	PKPNRANPQHKKKNVEIFGFKFNGLFELHKTLGTFLIDKNIP
Ga0228619_10032948	3300028130	Seawater	NKPSPKPNKVSPKQRKKDVDIFGFKLSGLTELHDTLGIFLIFKNII
Ga0228642_10453261	3300028131	Seawater	EAPDVETIKSPSPKPKIINPRQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS
Ga0257106_12175092	3300028194	Marine	KETINKPSPKPNKVNPRHRKNKVENFGLRFNGFSELQDTLGIILIFKNIF
Ga0228615_10626541	3300028418	Seawater	SPKPKIINPIQRKKEVEALGFKFNGLSELHDTLGIFLIFKNIS
Ga0307995_10973001	3300031696	Marine	DQGEAPAKETINNPSPKPNKVNPRHKKKKVEISGLRFNGFSELQDTLGIFLIFKNIIF
Ga0307998_12047502	3300031702	Marine	AETINSPSPNPNKISPKHKKKKVEILGFKFKGFSELQETLGIFLIFKNIFSINYFF
Ga0308013_103017702	3300031721	Marine	PKPNKTNPRHKKKKVEIFGFKFKGLSELHNTLGIFLIFKNIFSINYFF
Ga0315322_103120163	3300031766	Seawater	APEVETINNPSPKPNKVNPKHKKKNVEIFGFKFNGLSELQETFGIFLIFKNIFE
Ga0315322_103380701	3300031766	Seawater	PNKANPKHKKKNVEIFGFKFNGLSELQDTLGIFLIFKNIFK
Ga0315322_105463372	3300031766	Seawater	INNPSPKPNKVNPKHKKNNVEIFGFKFNGLSELQDTFGIFLIFKNIFE
Ga0315332_103409451	3300031773	Seawater	PIHKKKNVEIFGFKFNGLSEVHDTFGIFLIFKNIF
Ga0315326_107452621	3300031775	Seawater	AKTDHGEAPDNETINNPSPKPNKVNPKHKKKNVEIFGFKFNGLSELQDTLGIFLIFKNIF
Ga0310343_110808062	3300031785	Seawater	NPKQRKKKVLIFGLKFKGSLELHDTLGIFLIVKNIL
Ga0315320_106198892	3300031851	Seawater	GDAPEAETINKPSPKPNKVSPKQRKKDVDIFGFKLSGLTELHDTLGIFLIFKNII
Ga0315320_109264461	3300031851	Seawater	TINKPSPRPNKVNPKQRKKNVDIFGFKLSGLSELHDTFGIFLIFKNII
Ga0315318_106447122	3300031886	Seawater	KPNKANPKHKKKNVEIFGFKFNGLSELQDTFGIFLIFKNIFE
Ga0315315_115284021	3300032073	Seawater	TINKPSPRPNKVNPKQRKKNVDIFGFKLSGFSELHDTFGIFLIFKNII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters