Metagenome / Metatranscriptome Family F057421

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057421
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	84 residues
Representative Sequence	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPVETLVAATQGTALRDRLRHRPQV
Number of Associated Samples	98
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.21 %
% of genes near scaffold ends (potentially truncated)	22.79 %
% of genes from short scaffolds (< 2000 bps)	88.24 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.971 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (22.794 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (30.147 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.45% β-sheet: 0.00% Coil/Unstructured: 34.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF01058	Oxidored_q6	8.09
PF00202	Aminotran_3	8.09
PF02211	NHase_beta	8.09
PF13473	Cupredoxin_1	6.62
PF02469	Fasciclin	3.68
PF14226	DIOX_N	2.94
PF13396	PLDc_N	2.94
PF11255	DUF3054	2.21
PF00346	Complex1_49kDa	1.47
PF09490	CbtA	1.47
PF13561	adh_short_C2	0.74
PF04986	Y2_Tnp	0.74
PF14486	DUF4432	0.74
PF00211	Guanylate_cyc	0.74
PF02979	NHase_alpha	0.74
PF00109	ketoacyl-synt	0.74
PF00146	NADHdh	0.74
PF08352	oligo_HPY	0.74
PF00361	Proton_antipo_M	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	8.09
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	8.09
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	8.09
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	8.09
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	3.68
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	1.47
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	1.47
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.74
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.74
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.97 %
Unclassified	root	N/A	11.03 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.06 %
Unclassified	root	N/A	11.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72.06 %
Unclassified	root	N/A	11.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.41 %
Unclassified	root	N/A	11.03 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	3.68 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	52.21 %
Unclassified	root	N/A	11.03 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	3.68 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	52.21 %
Unclassified	root	N/A	11.03 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	3.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.74 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	52.21 %
Unclassified	root	N/A	11.03 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	3.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.74 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	52.21 %
Unclassified	root	N/A	11.03 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	3.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.74 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig74769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
2140918007\|ConsensusfromContig55485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2085	Open in IMG/M
2170459014\|G1P06HT02IR0JA	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300002568\|C688J35102_120245196	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300004778\|Ga0062383_10198415	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300004778\|Ga0062383_10503480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300004782\|Ga0062382_10098130	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300005093\|Ga0062594_102620285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300005329\|Ga0070683_101223776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300005329\|Ga0070683_101236308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300005330\|Ga0070690_101479378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300005331\|Ga0070670_101174223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300005341\|Ga0070691_10582108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300005356\|Ga0070674_100213259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1498	Open in IMG/M
3300005364\|Ga0070673_100688782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	938	Open in IMG/M
3300005518\|Ga0070699_101670380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300005543\|Ga0070672_100696868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300005548\|Ga0070665_101405627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300005718\|Ga0068866_11409558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005833\|Ga0074472_11502273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300006050\|Ga0075028_100149904	Not Available	1230	Open in IMG/M
3300006050\|Ga0075028_100305862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300006059\|Ga0075017_100140164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1715	Open in IMG/M
3300006354\|Ga0075021_10291254	Not Available	1010	Open in IMG/M
3300006604\|Ga0074060_10241930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300006953\|Ga0074063_13033076	Not Available	858	Open in IMG/M
3300007521\|Ga0105044_10099420	All Organisms → cellular organisms → Bacteria	3272	Open in IMG/M
3300009098\|Ga0105245_11358088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300009167\|Ga0113563_12588189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300009177\|Ga0105248_12905308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300011119\|Ga0105246_11984055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300012212\|Ga0150985_103777302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300012903\|Ga0157289_10030660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1253	Open in IMG/M
3300012955\|Ga0164298_10782085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300012984\|Ga0164309_10107940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1772	Open in IMG/M
3300012984\|Ga0164309_10836985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300012984\|Ga0164309_11439252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300012987\|Ga0164307_10142315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1568	Open in IMG/M
3300012989\|Ga0164305_11485473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300013296\|Ga0157374_11026817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300013296\|Ga0157374_11962370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300013308\|Ga0157375_10866107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1049	Open in IMG/M
3300014322\|Ga0075355_1082929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300014745\|Ga0157377_11206618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300014969\|Ga0157376_12681771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300015159\|Ga0167630_1019019	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300015189\|Ga0167667_1010008	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300015189\|Ga0167667_1075973	Not Available	715	Open in IMG/M
3300015371\|Ga0132258_11857817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1517	Open in IMG/M
3300015371\|Ga0132258_13786511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300017965\|Ga0190266_10613180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300018476\|Ga0190274_10016789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4703	Open in IMG/M
3300018476\|Ga0190274_10553012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1165	Open in IMG/M
3300018476\|Ga0190274_10953325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300018481\|Ga0190271_11683274	Not Available	748	Open in IMG/M
3300018481\|Ga0190271_12184831	Not Available	660	Open in IMG/M
3300020186\|Ga0163153_10006853	All Organisms → cellular organisms → Bacteria	12581	Open in IMG/M
3300021329\|Ga0210362_1002269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300021470\|Ga0194051_1158294	Not Available	751	Open in IMG/M
3300022910\|Ga0247768_1231184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300023078\|Ga0247756_1101147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300025925\|Ga0207650_11311318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300025937\|Ga0207669_11214478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300025940\|Ga0207691_10958466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300025940\|Ga0207691_11067462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300025945\|Ga0207679_11039656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300025961\|Ga0207712_11622485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300026041\|Ga0207639_10834427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300026121\|Ga0207683_10564294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1053	Open in IMG/M
3300026121\|Ga0207683_11730837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300027831\|Ga0209797_10126492	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300027843\|Ga0209798_10195435	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300027850\|Ga0209591_10278452	Not Available	1257	Open in IMG/M
3300027894\|Ga0209068_10009851	All Organisms → cellular organisms → Bacteria	4520	Open in IMG/M
3300027894\|Ga0209068_10490952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300027894\|Ga0209068_10514311	Not Available	691	Open in IMG/M
3300027897\|Ga0209254_10003166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15014	Open in IMG/M
3300028379\|Ga0268266_11175285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300028379\|Ga0268266_11766808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300028733\|Ga0302261_1053296	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300028770\|Ga0302258_1094000	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300028782\|Ga0307306_10002878	All Organisms → cellular organisms → Bacteria	3573	Open in IMG/M
3300028855\|Ga0302257_1082612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300028865\|Ga0302291_10314851	Not Available	538	Open in IMG/M
3300028869\|Ga0302263_10138655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	970	Open in IMG/M
3300029984\|Ga0311332_10018206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4670	Open in IMG/M
3300029984\|Ga0311332_11581232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	532	Open in IMG/M
3300029987\|Ga0311334_10892446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300029989\|Ga0311365_10418389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300029990\|Ga0311336_10529030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1001	Open in IMG/M
3300030000\|Ga0311337_10647039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	912	Open in IMG/M
3300030002\|Ga0311350_10132215	All Organisms → cellular organisms → Bacteria	2202	Open in IMG/M
3300030010\|Ga0302299_10005818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	7473	Open in IMG/M
3300030050\|Ga0302255_1137177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300030294\|Ga0311349_10248311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1677	Open in IMG/M
3300030294\|Ga0311349_11800975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300031170\|Ga0307498_10318665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300031226\|Ga0307497_10357412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300031231\|Ga0170824_114575499	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300031232\|Ga0302323_101017707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	921	Open in IMG/M
3300031232\|Ga0302323_101045622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	908	Open in IMG/M
3300031722\|Ga0311351_10248088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1347	Open in IMG/M
3300031834\|Ga0315290_10031804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4186	Open in IMG/M
3300031834\|Ga0315290_10112687	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300031834\|Ga0315290_10145970	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300031834\|Ga0315290_10241392	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300031834\|Ga0315290_10509583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300031834\|Ga0315290_10862681	Not Available	771	Open in IMG/M
3300031834\|Ga0315290_11219463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300031902\|Ga0302322_102425790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300031997\|Ga0315278_10037263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4718	Open in IMG/M
3300031997\|Ga0315278_10284173	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300032018\|Ga0315272_10527696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300032143\|Ga0315292_10808245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300032143\|Ga0315292_10963261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300032143\|Ga0315292_11456886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300032156\|Ga0315295_10342510	Not Available	1518	Open in IMG/M
3300032156\|Ga0315295_11467386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300032163\|Ga0315281_10773798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	993	Open in IMG/M
3300032163\|Ga0315281_11586316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300032164\|Ga0315283_10097317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3073	Open in IMG/M
3300032164\|Ga0315283_10262942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1867	Open in IMG/M
3300032164\|Ga0315283_10520463	All Organisms → cellular organisms → Bacteria → Proteobacteria	1292	Open in IMG/M
3300032164\|Ga0315283_11099557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300032164\|Ga0315283_11499071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300032256\|Ga0315271_10693063	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300032256\|Ga0315271_10878766	Not Available	773	Open in IMG/M
3300032256\|Ga0315271_10955189	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300032256\|Ga0315271_11324561	Not Available	622	Open in IMG/M
3300032275\|Ga0315270_10955580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300032397\|Ga0315287_10412993	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300032397\|Ga0315287_11858071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300032401\|Ga0315275_12368730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300032516\|Ga0315273_11485978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	834	Open in IMG/M
3300033416\|Ga0316622_102748220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	565	Open in IMG/M
3300034123\|Ga0370479_0241672	Not Available	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.68%
Host-Associated	Host-Associated	20.59%
Engineered	Engineered	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	41.18%
Aquatic	Environmental → Aquatic	37.50%
Plants	Host-Associated → Plants	20.59%
Solid Waste	Engineered → Solid Waste	0.74%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	30.88%
Soil	Environmental → Terrestrial → Soil	25.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.44%
Peat	Environmental → Terrestrial → Peat	14.71%
Sediment	Environmental → Aquatic → Sediment	5.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.15%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.47%
Marine	Environmental → Aquatic → Marine	0.74%
Grass	Engineered → Solid Waste → Grass	0.74%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	24.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.41%
Loam	Environmental → Terrestrial → Soil → Loam	4.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.21%
Ice	Environmental → Aquatic → Freshwater → Ice	1.47%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.47%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.47%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.74%
Composting	Engineered → Solid Waste → Grass → Composting	0.74%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	22.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.21%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.47%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.47%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.47%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.47%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	22.79%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	14.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.41%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.68%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.21%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.47%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.47%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.74%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.74%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.74%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.74%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.74%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.74%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.74%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015159	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3C, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300021329	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.625 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021470	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-20m	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300023078	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L066-202C-4	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027850	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028733	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_4	Environmental	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030050	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_4	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300034123	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00993540	2124908043	Soil	MVGRLDEERLEILRGWGAGLAADAREELRAAGKAITVLVDEIDRLQVDLWNARVERRAPLEPPTASSQGIAEALRDRIAT
A_all_C_01520210	2140918007	Soil	MVGRLDEERLEILRGWGAGLAADAREELRAAGKAITVLVDEIDRLQVDLWNARVERRAPLEPPTASSQGIAEALRDRIATGGVQP
2PV_03004720	2170459014	Switchgrass, Maize And Mischanthus Litter	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVERDPAEPVEPLVAVSQGTALRDRLTRHRPQV
C688J35102_1202451963	3300002568	Soil	MVDRLDEERIEILRNWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEHEPAETLVAATQGMALRER
Ga0062383_101984152	3300004778	Wetland Sediment	VVDRLDEEKLEILRGWGAGLALDNREELRAAGKAITVLIEEIDRLQVDLWNAKVKEREAFQPLVASSQGTALRDRLLRSHPQA*
Ga0062383_105034802	3300004778	Wetland Sediment	MVDRLDEEKLEILRGWGAGLAADDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREAFAPLVASSQGAALRDRLLGSRPQA*
Ga0062382_100981302	3300004782	Wetland Sediment	VVDRLDEEKLEILRGWGAGLAADDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREAFAPLVASSQGAALRDRLLGSRPQA*
Ga0062594_1026202851	3300005093	Soil	MVDRLDEERLEILRTWGAGLSSDHREELRAAGKAITVLIEEIDRLQVDLWNARAESRPSPQPEPAPPATQGSALRDRLTRMPRPI*
Ga0070683_1012237761	3300005329	Corn Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPAEPVEPLVAVSQGTALRDRLTRHRPQV*
Ga0070683_1012363081	3300005329	Corn Rhizosphere	MVDRLDEERIEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEHEPVERKPVETLLAATQGTALRDRLRHRPQV*
Ga0070690_1014793781	3300005330	Switchgrass Rhizosphere	MVDRLDEERLEILRSWGLGLASDDREELRAAGKAITVLIDEIDRLQVDLWNARAVEREPGEPLVVAAQGVALRDRLARHRPQV*
Ga0070670_1011742231	3300005331	Switchgrass Rhizosphere	MVDRLDEERIEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPVETLVAATQGTALRDRLRHRPQV*
Ga0070691_105821081	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MIDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPGEPLVVAAQGHALRDRLARHRPQV*
Ga0070674_1002132593	3300005356	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVGHQPAERAVPIEPVDPVDSVEPAELEPVEPLVAVTQGNALRDRLARRRPQI*
Ga0070673_1006887821	3300005364	Switchgrass Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEHEPVERKPVETLLAATQGTALRDRLRHRPQ
Ga0070699_1016703801	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIDRLDEERLEILRSWGVGLAADDREELRAAGKAITVLIEEIDRLQIDLWNARAALGHHPLESLAVASQGSGSALRDRLTRHRPGV*
Ga0070672_1006968682	3300005543	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPGESFVAISQGTALRDRLKRPRPQV*
Ga0070665_1014056272	3300005548	Switchgrass Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVGHQPAERADPIEPVDPVDSVEPAELEPVEPLVAVTQGNALRDRLARRRPQI*
Ga0068866_114095581	3300005718	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVGHQSAERADPIEPVDPVDSVEPAELEPVEPLVAVTQGNALRDRLARRRPQI*
Ga0074472_115022732	3300005833	Sediment (Intertidal)	VVDRLDEERLEILKGWGAGLALDSREELRAAGKAITVLIEEIDRLQVDLWNARADQTAAFEPLVTSTQGTALRQRLTRRHQQA*
Ga0075028_1001499043	3300006050	Watersheds	MVERLDEERLEILRGWGAGLASDDREELRAAGKAITVLIEEIDRLEIDLWNSRVDQRQSARREAPSSHGINEALLGRLATFDAQP*
Ga0075028_1003058622	3300006050	Watersheds	VIDRLDEERLEILRSWGAGLALDDREELRAAGKAITVLIEEIDRLQVDLWHAKAEQREAPAPLVASSQGTALRERLTPSRPRA*
Ga0075017_1001401642	3300006059	Watersheds	VADRLDEERLEILRSWGAGLASDDREELRAAGKAITVLIEEIDHLQVDLWSARVEQRAAAEPDEPSVAAPGTALRDRLTRMPRTT*
Ga0075021_102912541	3300006354	Watersheds	ILRGWGAGLASDDREELRAAGKAITVLIEEIDRLEIDLWNSRVDQRQSARREAPSSHGINEALLGRLATFDAQP*
Ga0074060_102419303	3300006604	Soil	LDEERLEILRTWGIGLAADDREELRAAGKAITVLIDEIDRLEVDLWNARVEHHQSAGHEAPASHGLDEALLGRLATFDAQASSG*
Ga0074063_130330763	3300006953	Soil	MGERLDEERLEILRTWGIGLAADDREELRAAGKAITVLIDEIDRLEVDLWNARVERHEAAGREAPVSHGLEDALLGRLATFDAQASSG*
Ga0105044_100994202	3300007521	Freshwater	MIDRLDEQRLEILRGWGAGLASDDREELRAAGKAITVLIEEIDQLQVDLWNARVDQRDAARPLVASIQGAPLRARLADRPLPA*
Ga0105245_113580882	3300009098	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGLGLASDDREELRAAGKAITVLIDEIDRLQVDLWNARAVEREPGEPLVVAAQGHALRDRLARHRPQV*
Ga0113563_125881891	3300009167	Freshwater Wetlands	VVDRLDEERLEILRSWGAGLASDPREELRAAGKAITVLIEEIDRLHVDLWNVRVDRPELAGDLAVAAQGTALRERLLLKRRPT*
Ga0105248_129053081	3300009177	Switchgrass Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVGHQSAERADPIEPVDPVDSVEPAELEPVEPLVAVTQGNALRDRLARR
Ga0105246_119840552	3300011119	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARVVEHEPADEVEEVEEVEPLVAATQGTALRDRLTRHRRPEV*
Ga0150985_1037773022	3300012212	Avena Fatua Rhizosphere	MVDRLDEERIEILRNWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEHEPAETLVAATQGMALRERLRHRPQV*
Ga0157289_100306602	3300012903	Soil	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPGEPLVVAAQGHALRDRLARHRPQV*
Ga0164298_107820852	3300012955	Soil	MVDRLDEERLEILRSWGIGLASDDREELRAAGKSITVLIEEIVRLQVDLWNARAVEREPVETLVAATQG
Ga0164309_101079402	3300012984	Soil	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVEREPVETLVAATQGTALRDRLRHRPQV*
Ga0164309_108369853	3300012984	Soil	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPADVVEPLVAVSHGTALRDRLTRHRPQV*
Ga0164309_114392522	3300012984	Soil	MVDRLDEERLEILRTWGAGLSSDHREELRAAGKAITVLIEEIDRLQVDLWNARAESRPAPQPEPAPPATQGSALRDRLTCMS*
Ga0164307_101423154	3300012987	Soil	MVDRLDEERLEILRSWGIGLASDAREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPVETLVAATQGTALRDRLRHRPQV*
Ga0164305_114854731	3300012989	Soil	MIDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARADEREPGEPLVVAAQGHALRDRLARHRPQV*
Ga0157374_110268173	3300013296	Miscanthus Rhizosphere	LMVDRLDEERIEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEHEPVERKPVETLLAATQGTALRDRLRHRPQV*
Ga0157374_119623702	3300013296	Miscanthus Rhizosphere	MVDRLDEERIEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPVETLVAATQATALRDRLRHRP
Ga0157375_108661072	3300013308	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEHEPVERKPVETLLAATQGTALRDRLRHRPQV*
Ga0075355_10829292	3300014322	Natural And Restored Wetlands	LDEERLEILRSWGAGLASDTREELRAAGKAITVLIEEIDHLQVDLWSARVEQRTPAPAPEPATSASQVSALRERLTRTPRTT*
Ga0157377_112066182	3300014745	Miscanthus Rhizosphere	MVDRLVEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVGHQPAERAVPIEPVDPVDSVEPAELEPVEPLVAVTQGNALRDRLARRRPQI*
Ga0157376_126817712	3300014969	Miscanthus Rhizosphere	MVDRLDEERIEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEHEPVERKPVETLRAATQGTALRDRLRHRPQV*
Ga0167630_10190195	3300015159	Glacier Forefield Soil	RLEVLRGWGAGLASDGREELRAAGKAITVLIEEIDRLQVDLWHARFDQNEQAHTQSLGLGETLRERLAGALIQPQ*
Ga0167667_10100083	3300015189	Glacier Forefield Soil	MIDRLDEQRLEILRGWGAGLASDEREELRAAGKAITVLIEEIDQLQVDLWNARVDQRDANRPLVATSHGALRARLADGRLPA*
Ga0167667_10759733	3300015189	Glacier Forefield Soil	MVDRLDEERIEILRSWGIGLASDDREELRAAGKAITVLVEEIDRLQVDLWNARAVEREPLEPVEALVVATQG
Ga0132258_118578173	3300015371	Arabidopsis Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVGHQPAERADPIEPVDPVEPAELEPVEPLVAVTQGNALRDRLARRRPQI*
Ga0132258_137865113	3300015371	Arabidopsis Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPAEAAEPLVVVSHGTALRDRLTRHRPQV*
Ga0190266_106131802	3300017965	Soil	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARVVEHEPADEVEEVEEVEPLVAATQGTALRDRLTRHRRPQV
Ga0190274_100167894	3300018476	Soil	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPGESFVAITQGTALRDRLKRPRPQV
Ga0190274_105530121	3300018476	Soil	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPVETLVAATQGTALRDRLRHRPQV
Ga0190274_109533253	3300018476	Soil	MIDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPGEPLVVAAQ
Ga0190271_116832742	3300018481	Soil	MIDRLDEQRLEILRGWGAGLASDEREELRAAGKAITVLIEEIDRLQVDLWNARVDQRDSARTLVGQSHAAALRTRLAEGPVPSV
Ga0190271_121848312	3300018481	Soil	MIDRLDEQRLEILRGWGAGLASDEREELRAAGKAITVLIEEIDRLQVDLWNARVDQRDSARTAVGQSHAAALRARLAEGRVPTL
Ga0163153_1000685311	3300020186	Freshwater Microbial Mat	MIDRLDEQRLEILRSWGAGLASDDREELRAAGKAITVLIEEIDQLQVDLWNARVEQRDATRPLHAPTQGAPLRARLADHPLPA
Ga0210362_10022691	3300021329	Estuarine	MVGRLDEERLEILRGWGAGLASDNREELRAAGKAITVLIEEIDRLQVDLWNARVAERDAHEPLVASSQGTAVRDRLLRAHPQV
Ga0194051_11582942	3300021470	Anoxic Zone Freshwater	MIDRLDEQRLEILRGWGAGLASDDREELRAAGKAITVLVEEIDRLQVDLWNARVDQRDSERTFVVPSHGAALRTQLEESCVSTT
Ga0247768_12311842	3300022910	Plant Litter	MVDRLDEERIEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPGEPLVVAAQGHAL
Ga0247756_11011472	3300023078	Plant Litter	MIDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVEREPGEPLVVAAQGVALRDRLARHRPQV
Ga0207650_113113182	3300025925	Switchgrass Rhizosphere	MIDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVEREPGEPLVVAAQGV
Ga0207669_112144781	3300025937	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVGHQPAERAVPIEPVDPVDSVEPAELEPVEPLVAVTQGNALRDRLARRRPQI
Ga0207691_109584662	3300025940	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPGESFVAISQGTALRDRLKRPRPQV
Ga0207691_110674622	3300025940	Miscanthus Rhizosphere	MVDRLDEERIEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEHEPVERKPVETLLAATQGTALRDRLRHRPQV
Ga0207679_110396561	3300025945	Corn Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPAEPVEPLVAVSQGTALRDRLTRHRPQV
Ga0207712_116224852	3300025961	Switchgrass Rhizosphere	RLDEERLEILRTWGAGLSSDHREELRAAGKAITVLIEEIDRLQVDLWNARAESRPSPQPEPAPPATQGSALRDRLTRMPRPI
Ga0207639_108344271	3300026041	Corn Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVEREPGEPLVVAAQGVALRDRLARHRPQV
Ga0207683_105642942	3300026121	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPGEPLVVAAQGHALRDRLARHRPQV
Ga0207683_117308372	3300026121	Miscanthus Rhizosphere	MVDRLDEERLEILRSWGLGLASDDREELRAAGKAITVLIDEIDRLQVDLWNARAVEREPGEPLVVAAQGVALRDRLARHRPQV
Ga0209797_101264922	3300027831	Wetland Sediment	MVDRLDEEKLEILRGWGAGLAADDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREAFAPLVASSQGAALRDRLLGSRPQA
Ga0209798_101954351	3300027843	Wetland Sediment	APVVDRLDEEKLEILRGWGAGLALDNREELRAAGKAITVLIEEIDRLQVDLWNAKVKEREAFQPLVASSQGTALRDRLLRSHPQA
Ga0209591_102784521	3300027850	Freshwater	MIDRLDEQRLEILRGWGAGLASDDREELRAAGKAITVLIEEIDQLQVDLWNARVDQRDAARPLVASIQGAPLRARLADRPLPA
Ga0209068_100098515	3300027894	Watersheds	MVERLDEERLEILRGWGAGLASDDREELRAAGKAITVLIEEIDRLEIDLWNARVEQRQSAWQGAPASHGINEALQGRLATFDAQT
Ga0209068_104909522	3300027894	Watersheds	VIDRLDEERLEILRSWGAGLALDDREELRAAGKAITVLIEEIDRLQVDLWHAKAEQREAPAPLVASSQGTALRERLTPSRPRA
Ga0209068_105143112	3300027894	Watersheds	EILRGWGAGLASDDREELRAAGKAITVLIEEIDRLEIDLWNSRVDQRQSARREAPSSHGINEALLGRLATFDAQP
Ga0209254_1000316618	3300027897	Freshwater Lake Sediment	VVNRLDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNAKADQTAAFEPLVTSTQGTALRQRLTRRHQQA
Ga0268266_111752852	3300028379	Switchgrass Rhizosphere	MIDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREPGEPLVVAAQGHALRDRLARHRPQV
Ga0268266_117668082	3300028379	Switchgrass Rhizosphere	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQIDLWNARAVGHQPAERADPIEPVDPVDSVEPAELEPVEPLV
Ga0302261_10532962	3300028733	Fen	MVDRLDEERIEILRGWGLGLASDDREELRAAGKAITVLIEEIDRLQVDLWNAKAAELEAPEPLVTSSQGTALRERLTRMRPQT
Ga0302258_10940001	3300028770	Fen	MVDRLDEERIEILRGWGLGLASDDREELRAAGKAITVLIEEIDRLQVDLWNAKAAELEAPEPLVTSSQGTALRERLTRMR
Ga0307306_100028785	3300028782	Soil	MVDRLDEERLEILRSWGIGLASDDREELRAAGKAITVLIEEIDRLQVDLWNERAVEHEPVETLVAATQGTALRDRLRHRPQV
Ga0302257_10826121	3300028855	Fen	VVDRLDEERIEILRSWGAGLASDDREELRAAGKAITVLIEEIDHLQVDLWSARVERPAPAEPVEPPVAAAQGIALRDRLTRTPRTT
Ga0302291_103148512	3300028865	Fen	LRRWGAGLASDDREELRAAGKAITVLIEEIDHLQVDLWTARVERRESAAPAEQHVAATPGSALRDRLSRTARTT
Ga0302263_101386551	3300028869	Fen	VVPDRLDEERLEILRRWGAGLASDDREELRAAGKAITVLIEEIDHLQVDLWTARVERRESAAPAEQHVAATPGSALRDRLSRTARTT
Ga0311332_100182065	3300029984	Fen	MVDRLDEERIEILRGWGLGLASDDREELRAAGKAITVLIEEIDRLQVDLWNAKAAELEAPEPLVTTSQGTALRERLTRMRPQT
Ga0311332_115812322	3300029984	Fen	IEILRAWGAGLAGDSREELRAAGKAITVLVDEIDRLQVDLWNARVDTRPPFEPTADSSREIADTLHDRAAAAFGVNTGAHRISTVSE
Ga0311334_108924462	3300029987	Fen	VVPDRLDEERLEILRRWGAGLASDDREELRAAGKAITVLIEEIDHLQVDLWSARVERPAPAEPVEPPVAAAQGIALRDRLTRTPRTT
Ga0311365_104183891	3300029989	Fen	MVDRLDEEKIEILRGWGLGLASDDREELRAAGKAITVLIEEIDHLQIDLWNARVVEPAPMLVPPEPEPMAGTPATTLRDRLARVMPQA
Ga0311336_105290303	3300029990	Fen	MGDRLDEERIEILRAWGAGLAGDSREELRAAGKAITVLVDEIDRLQVDLWNARVDTRPPFEPTADSSREIADTLHDRAAAAFGVNTGAHRISTVSE
Ga0311337_106470391	3300030000	Fen	VVDRLDEERIEILRSWGAGLASDDREELRAAGKAITVLIEEIDHLQVDLWSARVERPAPAAPVEPPVAAAQGIALRDRLTRTPRTT
Ga0311350_101322155	3300030002	Fen	LDEERIEILRGWGLGLASDDREELRAAGKAITVLIEEIDRLQVDLWNAKAAELEAPEPLVTSSQGTALRERLTRMRPQT
Ga0302299_100058181	3300030010	Fen	MVDRLDEERIEILRGWGLGLASDDREELRAAGKAITVLIEEIDRLQVDLWNAKAAELEAPEPLVTSSQGTALR
Ga0302255_11371771	3300030050	Fen	MVDRLDEERIEILRGWGLGLASDDREELRAAGKAITVLIEEIDRLQVDLWNAKAAELEAPEPLVTSSQGTALRERLTRM
Ga0311349_102483114	3300030294	Fen	VVDRLDEERIEILRSWGAGLASDDREELRAAGKAITVLIEEIDHLQIDLWNARVVEPAPMLVPPEPEPMAGTPATTLRDRLARVMPQA
Ga0311349_118009752	3300030294	Fen	VVPDRLDEERLEILRRWGAGLASDDREELRAAGKAITVLIEEIDHLQVDLWTARVERRESVAPAEQHVAATPGSALRDRLSRTARTT
Ga0307498_103186651	3300031170	Soil	MVDRLDEERLEILRSWGIGLAADDREELRAAGKAITVLIEEIDRLQVDLWNARAVDREVGEPAEPLVAATQGTALRDRLTRHRPQV
Ga0307497_103574122	3300031226	Soil	MVDRLDEERLEILRGWGAGLAADGREELRAAGKAITVLIEEIDRLQVDLWNARGDRRQAQEHADAPAAAPAPGLTDALRDRLVNGPATPVRQPSTGFPQPGS
Ga0170824_1145754992	3300031231	Forest Soil	WGLGLASDDREELRAAGKAITVLIDEIDRLHVDLWNARVVEPEAAEPKRDPEPLVTTTQGTALRDRLARIRPQV
Ga0302323_1010177072	3300031232	Fen	MVDRLDEEKIEILRGWGLGLASDDREELRAAGKAITVLIEEIDHLQIDLWNARVVEPVPMLVSPEPEPMAGTPATTLRDRRARVMPLA
Ga0302323_1010456223	3300031232	Fen	VVPDRLDEERLEILRRWGAGLASDDREELRAAGKAITVLIEEIDHLQVDLWTARVERRESAAPAEQHVAATPGSALRDRLSRTAR
Ga0311351_102480881	3300031722	Fen	VVDRLDEERIEILRSWGAGLASDDREELRAAGKAITVLIEEIDHLQIDLWNARVVEPVPMLVSPEPEPMAGTPATTLRDRLARVMPQA
Ga0315290_100318048	3300031834	Sediment	VVNRLDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNAKADQAAAFESLVTSTQGTALRQRLTRGHPQA
Ga0315290_101126873	3300031834	Sediment	VADRLDEERIEILRSWGAGLAGDGREELRAAGKAITVLVDEIDRLQVDLWNARVDHRPPFEPAAASSAEMAEVLHDRIATTAFNT
Ga0315290_101459702	3300031834	Sediment	MGDRLDEERIKILRGWGAGLAADSREELRAAGKAITVLVDEIDRLQVDLWNARVDRREPFQPAAASSQGIAETLLDRLATGSVPL
Ga0315290_102413921	3300031834	Sediment	MVDRLDEERIEILRGWGAGLAADSREELRAAGKAITVLVDEIDRLQVDLWNARVDPREPFEPAAASSQGIAEALLGRLATGSVQP
Ga0315290_105095832	3300031834	Sediment	VANRLDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNARANQAAAFDPLATTSPGTALRQRLTQGHPQA
Ga0315290_108626812	3300031834	Sediment	MGDRLDEERIEILRGWGAGLAADGREELRAAGKAITVLVDEIDRLQVDLWNARVDHRAPFEPAAASSQGIAEALLNRLATGSVQP
Ga0315290_112194632	3300031834	Sediment	VVDRLDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEPAAFEPLVASSQGAALRDRLLRSHPQA
Ga0302322_1024257902	3300031902	Fen	MVDRLDEEKIEILRGWGLGLASDDREELRAAGKAITVLIEEIDHLQIDLWNARVVEPVPMLVSPEPEPMAGTPATTLRDRLARVMPQA
Ga0315278_100372634	3300031997	Sediment	MVDRLDEERIEILRGWGAGLAADGREELRAAGKAITVLVDEIDRLQVDLWNARIDQREPFEPAAAASRGLNNALSDRLATGSGQL
Ga0315278_102841733	3300031997	Sediment	MGDRLDEERIEILRGWGAGLAADSREELRAAGKAITVLVDEIDRLQVDLWNARVDRREPFQPAAASSQGIAETLLDRLATGSVPL
Ga0315272_105276962	3300032018	Sediment	LDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNAKADQAAAFESLVTSTQGTALRQRLTRGHPQA
Ga0315292_108082452	3300032143	Sediment	LDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNAKADQAAAFEPRVAATQGTALRQRLTRGHPQA
Ga0315292_109632612	3300032143	Sediment	VVNRLDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREAFEPLVVSSQGTALRDRLLGSRQQT
Ga0315292_114568861	3300032143	Sediment	VVNRLDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNAKADRTAAFEPLVTSTQGTALRQRLTRRHQQA
Ga0315295_103425102	3300032156	Sediment	MIDRLDEQRLEILRGWGAGLASDDREELRAAGKAITVLIEEIDQLQVDLWNARVDQRDATRPLITPSHGQALRARLADGRLPA
Ga0315295_114673861	3300032156	Sediment	VVNRLDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNAKADQAAAFEPRVAATQGTALRQRLTRGHPQA
Ga0315281_107737981	3300032163	Sediment	MIDRLDEQRLEILRGWGAGLASDGREELRAAGKAITVLVDEIDRLQVDLWNARVDSRPPFEPAVASSQHIAEVLLDRLTTGSPQPQ
Ga0315281_115863161	3300032163	Sediment	MVDRLDEERIEILRGWGAGLAADSREELRAAGKAITVLVDEIDRLQVDLWNARVDRREPFEPAAASSQGIAEALLNRIATGGVQP
Ga0315283_100973174	3300032164	Sediment	VVNRLDEERLEILRSWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREAFEPLVVSSQGTALRDRLLGSRQQT
Ga0315283_102629421	3300032164	Sediment	MVDRLDEERIEILRGWGAGLASDGREELRAAGKAITVLVDEIDRLQVDLWNARVEHRAPFEPPGASTQGIAETLLDRIATGSVQQ
Ga0315283_105204632	3300032164	Sediment	MIDRLDEQRLEILRGWGAGLASDDREELRAAGKAITVLIEEIDQLQVDLWNARVDQRDATRPLITPSHGAALRARLADGRLPA
Ga0315283_110995571	3300032164	Sediment	MVDRLDEERIEILRGWGAGLAADGREELRAAGKAITVLVDEIDRLQVDLWNARVDHRAPFEPAAASSQGIAEALLNRLATGSVQP
Ga0315283_114990711	3300032164	Sediment	VVNRLDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNAKADRASAFEPLVTSTQGAALRQRLTRGHPQT
Ga0315271_106930632	3300032256	Sediment	MIDRLDEQRLEILRSWGTGLSSDPREELRAAGKAITVLIEEIDQLQVDLWNAKVEQRDTSRAFEAASQATTVRPRLADIPLPT
Ga0315271_108787662	3300032256	Sediment	GNSGTTWTRLHLMVDRLDEERIEILRGWGAGLAADGREELRAAGKAITVLVDEIDRLQVDLWNARIDQREPFEPAAAASRGLNNALSDRLATGSGQL
Ga0315271_109551892	3300032256	Sediment	MVDRLDEERIEILRGWGAGLAADNREELRAAGKAITVLVDEIDRLQVDLWNARVDQRKAFDPAAASSQGIAE
Ga0315271_113245612	3300032256	Sediment	MIDRLDEQRLEILRGWGAGLASDDREELRAAGKAITVLIEEIDQLQVDLWNARVDQRDATRPLITPSHGQA
Ga0315270_109555801	3300032275	Sediment	MVDRLDEERIEILRGWGAGLAADGREELRAAGKAITVLVDEIDRLQVDLWNARVDPREPFEPAAASSQGIAEALLGRLATGSVQP
Ga0315287_104129932	3300032397	Sediment	MIDRLDEQRLEILRGWGAGLASDQREELRAAGKAITVLIEEIDRLQVDLWNARVDQRDATRPLVAPSQGAPLRARLADSPLPA
Ga0315287_118580712	3300032397	Sediment	LDEERLEILRGWGAGLGSDDREELRAAGKAITVLIEEIDRLQVDLWNARAVEREAFEPLVVSSQGTALRDRLLGSRQQT
Ga0315275_123687302	3300032401	Sediment	VADRLDEERIEILRSWGAGLAGDGREELRAAGKAITVLVDEIDRLQVDLWNARVDHRPPFEPAPASSAEMAEVLHDRIATTAFNP
Ga0315273_114859782	3300032516	Sediment	VEYGALMVDRLDEERIEILRGWGAGLASDGREELRAAGKAITVLVDEIDRLQVDLWNARVEHRAPFEPPGASTQGIAETLLDRIATGSVQQ
Ga0316622_1027482202	3300033416	Soil	LDEERLEILRSWGAGLASDPREELRAAGKAITVLIEEIDRLHVDLWNGRVDRPELVEELTAAAQVAALRERLTLKRRPS
Ga0370479_0241672_61_312	3300034123	Untreated Peat Soil	MIDRLDEQRLEILRGWGAGLASDQREELRAAGRAITVLIEEIDQLQVDLWNARVEQRDAARPLVAPSHGAPLRGRLGDRPLPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057421

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences