NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F057395

Metagenome / Metatranscriptome Family F057395

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F057395
Family Type Metagenome / Metatranscriptome
Number of Sequences 136
Average Sequence Length 58 residues
Representative Sequence TQPGMNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Number of Associated Samples 117
Number of Associated Scaffolds 136

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.74 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.265 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine
(22.059 % of family members)
Environment Ontology (ENVO) Unclassified
(69.853 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.706 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.09%    β-sheet: 28.30%    Coil/Unstructured: 56.60%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 136 Family Scaffolds
PF01926MMR_HSR1 47.79
PF13679Methyltransf_32 6.62
PF03193RsgA_GTPase 4.41
PF02926THUMP 0.74
PF03929PepSY_TM 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 136 Family Scaffolds
COG1162Ribosome biogenesis GTPase RsgATranslation, ribosomal structure and biogenesis [J] 4.41
COG3182PepSY-associated TM regionFunction unknown [S] 0.74
COG3295Uncharacterized conserved proteinFunction unknown [S] 0.74


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.26 %
All OrganismsrootAll Organisms0.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001346|JGI20151J14362_10113852All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580892Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine22.06%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater16.18%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine11.03%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine9.56%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater6.62%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.88%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh5.15%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater4.41%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.68%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.94%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.94%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.47%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.47%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.47%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.74%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.74%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.74%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.74%
Methane Seep MesocosmEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm0.74%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.74%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.74%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000153Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 135mEnvironmentalOpen in IMG/M
3300000193Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 135mEnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300001351Pelagic Microbial community sample from North Sea - COGITO 998_met_03EnvironmentalOpen in IMG/M
3300001354Pelagic Microbial community sample from North Sea - COGITO 998_met_05EnvironmentalOpen in IMG/M
3300001952Marine microbial communities from Newport Harbor, Rhode Island, USA - GS008EnvironmentalOpen in IMG/M
3300003583Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNAEnvironmentalOpen in IMG/M
3300003584Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNAEnvironmentalOpen in IMG/M
3300003615Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_110m_DNAEnvironmentalOpen in IMG/M
3300003618Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_165m_DNAEnvironmentalOpen in IMG/M
3300004109Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_150m_DNAEnvironmentalOpen in IMG/M
3300004110Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNAEnvironmentalOpen in IMG/M
3300004279Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10mEnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006399Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007558Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733EnvironmentalOpen in IMG/M
3300007681Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753EnvironmentalOpen in IMG/M
3300008254Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN4B Hudson CanyonEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009003Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725EnvironmentalOpen in IMG/M
3300009049Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009434Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516EnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009442Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011253Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeateEnvironmentalOpen in IMG/M
3300012524Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020053Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020173Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020396Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300020601Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021347Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022905Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaGEnvironmentalOpen in IMG/M
3300022928Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaGEnvironmentalOpen in IMG/M
3300023699Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 81R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024180Seawater microbial communities from Monterey Bay, California, United States - 82DEnvironmentalOpen in IMG/M
3300024185Seawater microbial communities from Monterey Bay, California, United States - 84DEnvironmentalOpen in IMG/M
3300024230Seawater microbial communities from Monterey Bay, California, United States - 48DEnvironmentalOpen in IMG/M
3300024236Seawater microbial communities from Monterey Bay, California, United States - 67DEnvironmentalOpen in IMG/M
3300024259 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MGEnvironmentalOpen in IMG/M
3300024261 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300024292Seawater microbial communities from Monterey Bay, California, United States - 37DEnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300024294Seawater microbial communities from Monterey Bay, California, United States - 78DEnvironmentalOpen in IMG/M
3300024313Seawater microbial communities from Monterey Bay, California, United States - 29DEnvironmentalOpen in IMG/M
3300024314Seawater microbial communities from Monterey Bay, California, United States - 70DEnvironmentalOpen in IMG/M
3300024316Seawater microbial communities from Monterey Bay, California, United States - 66DEnvironmentalOpen in IMG/M
3300024321Seawater microbial communities from Monterey Bay, California, United States - 31DEnvironmentalOpen in IMG/M
3300024335Seawater microbial communities from Monterey Bay, California, United States - 90DEnvironmentalOpen in IMG/M
3300024508Seawater microbial communities from Monterey Bay, California, United States - 77DEnvironmentalOpen in IMG/M
3300025458Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_110m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025584Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025602Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_200m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025637Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)EnvironmentalOpen in IMG/M
3300025658Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025668Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025694Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)EnvironmentalOpen in IMG/M
3300025696Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)EnvironmentalOpen in IMG/M
3300025699Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)EnvironmentalOpen in IMG/M
3300025712Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)EnvironmentalOpen in IMG/M
3300025770Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025809Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)EnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025832Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025874Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)EnvironmentalOpen in IMG/M
3300025876Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025894Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)EnvironmentalOpen in IMG/M
3300026479Seawater microbial communities from Monterey Bay, California, United States - 26DEnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300028008Seawater microbial communities from Monterey Bay, California, United States - 1D_rEnvironmentalOpen in IMG/M
3300028129Seawater microbial communities from Monterey Bay, California, United States - 42DEnvironmentalOpen in IMG/M
3300028131Seawater microbial communities from Monterey Bay, California, United States - 53DEnvironmentalOpen in IMG/M
3300028279Seawater microbial communities from Monterey Bay, California, United States - 14DEnvironmentalOpen in IMG/M
3300028287Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120mEnvironmentalOpen in IMG/M
3300031596Marine microbial communities from Western Arctic Ocean, Canada - CB9_SCMEnvironmentalOpen in IMG/M
3300031597Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCMEnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300031766Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SI39nov09_135mDRAFT_104143413300000153MarineINGQMRQSIHTKLWGSRPTSTTNCKMAQPGVNFSNSTGEIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
SI47jul10_135mDRAFT_101316513300000193MarineESWFDLKDNKLLKQVFTKYGCVPSKRLISKETWILIN*
OpTDRAFT_1018342913300000928Freshwater And MarineIEINGQIRQAIYTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLKDSSLLKQVFTKYGCVPSRIIVSKETWILNN*
JGI20151J14362_1002279563300001346Pelagic MarineSTTNCKMTQPGMNFSNSMGEIYVETWFDLKDSRLLKQVFTKYGCVPSKRLISKETWTLAN
JGI20151J14362_1011385233300001346Pelagic MarineMTQPGMNFSNSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN*
JGI20153J14318_1009852813300001351Pelagic MarineVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
JGI20155J14468_1007450633300001354Pelagic MarineKYQALYSKLWGSRPTSTTNCQMTQPGMNFSNSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
JGI20155J14468_1013148523300001354Pelagic MarineSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
GOS2224_104066123300001952MarineSHKTLFTKLWGSRPTSTTNCQMTQPGINFSNSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN*
JGI26253J51717_109576013300003583MarineMNFSNSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
JGI26254J51713_100094983300003584MarineCKSTQPGMNFSNSTGEIYVESWFDLKDNKLLKQVFTKYGCVPSKRLISKETWILIN*
JGI26271J51732_103653213300003615MarineTTNCKSTQPGMNFSNSTGEIYVESWFDLKDNKLLKQVFTKYGCVPSKRLISKETWILIN*
JGI26381J51731_101233943300003618MarineGQMRKSLHTKLWGSRPTSTTNCKMAQPGVNFSNSTGEIYVETWFDLKDNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0008650_104863113300004109MarineGEIYVESWFDLKDNKLLKQVFTKYGCVPSKRLISKETWILIN*
Ga0008648_1016119823300004110MarineSRPTSTTNCKPRGIGISNSIGEIFVETWHSVSDSKLLKQIFTKYDCVPSKRFISKETWVLIN*
Ga0066605_1019453913300004279MarineFSNSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0078893_1013544623300005837Marine Surface WaterQALYSKLWGSRPTSTTNCKMTQPGQNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0075462_1003187733300006027AqueousKLWGSRPTSTTNCQMTQPGMNFSNSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN*
Ga0075495_150665113300006399AqueousEINGQIRQAIYTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLKDSSLLKQVFTKYGCVPSRIIVSKETWVLNN*
Ga0102822_106790723300007558EstuarineLYSKLWGSRPTSTTNCRMTQPGQNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0102824_108926613300007681EstuarineTNCQMTQPGMNFSTSTGEIYVETWFDLKASKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0105351_130554123300008254Methane Seep MesocosmYQAMHSKLWGSRPTSTTNCKPRGIGLSNSIGEIFVETWHSVSDSKLLKQIFTKYDCVPSKRFISKETWVLIN*
Ga0102960_122918113300009000Pond WaterTNCQMTQPGINFSNSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN*
Ga0102813_115002123300009003EstuarineMTQPGMNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETLVLIN*
Ga0102911_105305813300009049EstuarineMTQPGMNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115549_112964713300009074Pelagic MarineMTQPGMNFSNSTGELYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115549_116416323300009074Pelagic MarineNGRSHKALFTKLWGSRPTSTTNCQMTQPGMNFSNSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLTN*
Ga0115552_138667123300009077Pelagic MarineYQVMHSKLWGSRPTSTTNCKPRGIGISNSIGEIFVETWHSLSDSKLLKQVFTKYDCIPSKRLISKETWVLIN*
Ga0114998_1006282013300009422MarineIYVETWFDLDDSKLLKQEFTKYGCVPSRIIVSKEIWVLKN*
Ga0115548_111603423300009423Pelagic MarineYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115548_111866023300009423Pelagic MarineFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115547_127108813300009426Pelagic MarinePTSTTNCKMTQPGQNFSNSTGEIYVETWFDLEDSKLLKQVFTKYGCVPSRRLVSKETWVLVN*
Ga0115562_117629823300009434Pelagic MarineTTNCQMTQPGMNFSTSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115556_105638333300009437Pelagic MarineFSNSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115561_105910123300009440Pelagic MarineMTQPGMNFSNSTGEIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115563_130275613300009442Pelagic MarineIRQAIYTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLEGSSLLKQVFTKYGCVPSRIIVSKETWILNN*
Ga0115554_134281623300009472Pelagic MarineVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN*
Ga0115570_1023401223300009496Pelagic MarineMNFSTSTGEIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115569_1012584533300009497Pelagic MarineNSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115569_1019269623300009497Pelagic MarinePAYSNSTGEIYIETWFDLEDGKLMKQVFTKFDCVPSKRLISRETWSLTN*
Ga0115569_1027680923300009497Pelagic MarineLWGSRPTSTTNCKPRGIGLSNSIGEIFVETWHSVSDSKLLKQIFTKYDCVPSKRFISKETWVLIN*
Ga0115568_1015029413300009498Pelagic MarineMTQPGMNFSNSTGEIYVETWFDLRDSRLLKQVFTKYGCVPSRRLVSKETWILIN*
Ga0115564_1034806323300009505Pelagic MarineSRPTSTTNCKMAQPGVNFSNSTGEIYIETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115567_1062222123300009508Pelagic MarineGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0115567_1072839323300009508Pelagic MarineETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN*
Ga0115004_1069354613300009526MarineTNCQSLPSRGFSTSTGEIYVETWFDLDDSKLLKQEFTKYGCVPSRIIVSKETWVLKN*
Ga0115004_1077548223300009526MarineSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0133547_1204417123300010883MarineNCKMTQPGINFSNSTGEIYVETWFDLKDSKLLKQVFTKYGCFPSKRLVSKETWVLIN*
Ga0151671_115897013300011253MarineKLWGSRPTSTTNCQMTQPGMNFSNSMGEIYVETWFDLKDSKFLKQVFTKYGCVPSKRLISKETWTLAN*
Ga0129331_128096823300012524AqueousESTEINGRKYQALYSKLWGSRPTSTTNCQMTQPGMNFSTSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN*
Ga0181396_112207713300017729SeawaterQAMYSKLWGSRPTSSINCKPTNIGISNSIGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0181423_129876423300017781SeawaterSNSTGEIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0181552_1025670223300017824Salt MarshFESLKINGRSYKTVYTKLWGSRPTSTTNCKMAQPGVNFSNSIGEIYVETWFDLNNSKLLKQVFTKYGCVPSKRLVSKETWSLAN
Ga0181595_1023976723300020053Salt MarshVNFSNSIGEIYVETWFDLNNSKLLKQVFTKYGCVPSKRLVSKETWSLAN
Ga0206125_1003406113300020165SeawaterETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0206128_126648423300020166SeawaterGPTSTTNCKMTQPGQNFSTSTGEIYIETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0181602_1017631513300020173Salt MarshEIYVETWFDLNNSKLLKQVFTKYGCVPSKRLVSKETWSLAN
Ga0181603_1018553323300020174Salt MarshRPTSTTNCKMAQPGVNFSNSIGEIYVETWFDLNNSKLLKQVFTKYGCVPSKRLVSKETWSLAN
Ga0206130_1001331213300020187SeawaterNGQMRKSIYTKLWGSRPTSTTNCQMTQPGMNFSNSTGEIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0206130_1017384423300020187SeawaterSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0206130_1020086013300020187SeawaterMTQPGMNFSNSTGEIYVETWFDLRDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0211687_1002888313300020396MarineRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLDDSKLLKQEFTKYGCVPSRIIVSKETWILKN
Ga0206126_1017158613300020595SeawaterQPGMNFSTSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0181557_121218223300020601Salt MarshCKMAQPGVNFSNSIGEIYVETWFDLNNSKLLKQVFTKYGCVPSKRLVSKETWSLAN
Ga0206682_1024466413300021185SeawaterTGEIYLETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0213862_1023382413300021347SeawaterTKLWGSRPTSTTNCKMAQPGVNFSNSIGEIYVETWFDLNNSKLLKQVFTKYGCVPSKRLVSKETWTLAN
Ga0206123_1025805723300021365SeawaterMTQPGMNFSNSTGEIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0206123_1029912323300021365SeawaterGMNFSNSTGEIYVETWFDFRDSRLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0206123_1037660413300021365SeawaterTTNCKMTQPGQNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0213868_1052077313300021389SeawaterSRPTSTTNCKPRGIGLSNSIGEIFVETWHSVSDSKLLKQIFTKYDCVPSKRFISKETWVLIN
Ga0222717_1030910313300021957Estuarine WaterSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN
Ga0222719_1075440723300021964Estuarine WaterWGSRPTSTTNCQMTQPGMNFSNSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN
Ga0255756_130000913300022905Salt MarshNCKMAQPGVNFSNSIGEIYVETWFDLNNSKLLKQVFTKYGCVPSKRLVSKETWSLAN
Ga0255758_1040719113300022928Salt MarshLKINGRSYKTVYTKLWGSRPTSTTNCKMAQPGVNFSNSIGEIYVETWFDLNNSKLLKQVFTKYGCVPSKRLVSKETWSLAN
Ga0228695_106380813300023699SeawaterMTQPGMNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0228668_105730823300024180SeawaterPHNFECIAENNQNLEINGKIFQAIHSKLWGSRPTSTTNCKPTNIGISNSIGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0228669_110234013300024185SeawaterYIETLFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0228669_111024813300024185SeawaterIRQAIYTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLEDSSLLKQVFTKYGCVPSRIIVSKETWVLNN
Ga0228638_114296823300024230SeawaterFQAMYSKLWGSRPTSSINCKPTNIGISNSIGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0228655_110299623300024236SeawaterKPTNIGISNSIGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
(restricted) Ga0233437_132246323300024259SeawaterTQPGMNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
(restricted) Ga0233439_1010628213300024261SeawaterYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
(restricted) Ga0233444_1017859413300024264SeawaterGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
(restricted) Ga0233444_1031836923300024264SeawaterMTQPGMNFSNSMGEIYVETWFDLKDSILLKQVFTKYGCVPSKRLISKETWTLAN
Ga0228630_103275833300024292SeawaterLEINGKIFQAIHSKLWGSRPTSTTNCKPTNIGISNSIGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0228651_113530313300024293SeawaterGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0228664_104520723300024294SeawaterMTQPGMNFSTSTGEIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0228624_109709613300024313SeawaterQSLPSRGFSTSTGEIYVETWFELEDSSLLKQVFTKYGCVPSRIIVSKETWVLNN
Ga0228657_109869323300024314SeawaterPTNIGISNSIGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0228654_106312623300024316SeawaterFQVIHSKLWGSRPTSTTNCKPANIGISNSIGEIFVETWHSLSDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0228626_110852813300024321SeawaterRQAIYTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLEDSSLLKQVFTKYGCVPSRIIVSKETWILNN
Ga0228672_109899713300024335SeawaterNIGISNSIGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0228663_109427223300024508SeawaterMTQPGQNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWILIN
Ga0209559_100558613300025458MarineNCKPTQPGMNFSNSTGEIYVESWFDLKDNKLLKQVFTKYGCVPSKRLISKETWILIN
Ga0209774_103962913300025584MarineTTNCKPTQPGMNFSNSTGEIYVESWFDLKDNKLLKQVFTKYGCVPSKRLISKETWILIN
Ga0209361_109782013300025602MarineTTNCKMAQPGVNFSNSTGEIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209197_114385723300025637Pelagic MarineNGQTRQAIYTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLKDSSLLKQVFTKYGCVPSRIIVSKETWILNN
Ga0209659_103624433300025658MarineTWFDSKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209251_112748513300025668MarineLEINGKIFQVIHSKLWGSRPTSTTNCKPANIGISNSIGEIFVETWHSLSDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0209406_108841023300025694Pelagic MarineMAQPGVNFSNSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN
Ga0209532_123064113300025696Pelagic MarineEIYVETWFDLKDSKLLKQIFTKYGCVPSKRLISKETWTLAN
Ga0209715_121978513300025699Pelagic MarineYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209305_106407333300025712Pelagic MarineLWGSRPTSTTNCQMTQPGMNFSTSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209305_121859223300025712Pelagic MarineRPTSTTNCQMTQPGMNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209362_126948413300025770MarineVNIEINGQIRQAIYTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLEDSSLLKQVFTKYGCVPSRIIVSKETWILNN
Ga0208425_110373623300025803AqueousKLWGSRPTSTTNCQMTQPGMNFSNSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN
Ga0208545_114318723300025806AqueousNFSNSMGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLISKETWTLAN
Ga0209199_118448313300025809Pelagic MarineKLWGSRPTSTTNCQMTQPGMNFSNSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209832_119082423300025830Pelagic MarineTNCQMTQPGMNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209307_105971633300025832Pelagic MarineIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209307_114725413300025832Pelagic MarineTQPGQNFSTSTGEIYIETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209308_1035373413300025869Pelagic MarineTRPTSTTNCKMTQPGQNFSNSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209533_110985013300025874Pelagic MarineRKYQALYSKLWGSRPTSTTNCQMTQPGMNFSNSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209533_129187613300025874Pelagic MarineNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSKRLVSKETWVLIN
Ga0209223_1045603523300025876Pelagic MarineTQPGMNFSTSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209534_1048318323300025880Pelagic MarineSGQLRKSVHTKLWGSRPTSTTNCQMTQPGMNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209309_1029287823300025881Pelagic MarineKMTQPGQNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209632_1050643423300025886Pelagic MarineQKLEINGKIFQAIHSKLWGSRPTSTTNCKPTNIGISNSIGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0209630_1030067223300025892Pelagic MarineETWFDLRDSRLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209335_1036729213300025894Pelagic MarineESTEINGRKYQALYSKLWGSRPTSTTNCKMTQPGQNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0228622_104238823300026479SeawaterQMRKSVHTKLWGSRPTSTTNCQMTQPGMNFSTSTGEIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0209091_1029044323300027801MarineTSTTNCKMTQPGINFSTSTGEIYVETWFDLENSKLLKQEFTKYGCVPSRRLVSKETWVLK
Ga0228674_115338313300028008SeawaterIYVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0228634_111094323300028129SeawaterSTTNCQMTQPGMNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0228642_107639213300028131SeawaterTTNCKPTNIGISNSIGEIFVETWHSLIDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0228613_103540613300028279SeawaterTWHSLSDSKLLKQVFTKYDCIPSKRLISKETWVLIN
Ga0257126_125140723300028287MarineRMTQPGMNFSNSTGEIHVETWFDLQNNKLLKQVFTKYGCVPSRRLVSKETWVLIN
Ga0302134_1013713123300031596MarineSRGFSTSTGEIYVETWFDLDDSKLLKQEFTKYGCVPSRIIVSKETWILKN
Ga0302116_110785513300031597MarineFSTSTGEIYVETWFDLDDSKLLKQEFTKYGCVPSRIIVSKEIWVLKN
Ga0302114_1026937913300031621MarineEINGQIRQAIHTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLDDSKLLKQEFTKYGCVPSRIIVSKETWILKN
Ga0307986_1007816413300031659MarineVEDIEINGQIRQAIHTKLWGSRPTSTTNCQSLPSRGFSTSTGEIYVETWFDLDDSKLLKQEFTKYGCVPSRIIASKETWVLKN
Ga0315322_1039161513300031766SeawaterWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWILIN
Ga0315322_1061349223300031766SeawaterMHSKLWGSRPTSTTNCKPRGIGISNSIGEIFVETWHSVSDSKLLKQIFTKYDCVPSKRFISKETWVLIN
Ga0315326_1078153223300031775SeawaterHSKLWGSRPTSTTNCKPRGIGISNSIGEIFVETWHSVSDSKLLKQIFTKYDCVPSKRFISKETWVLIN
Ga0315315_1121778223300032073SeawaterAYQAMHSKLWGSRPTSTTNCKPRGIGISNSIGEIFVETWHSVSDSKLLKQIFTKYDCVPSKRFISKEIWVLIN
Ga0315315_1187948413300032073SeawaterIEIAEIKGRKYQALYSKLWGSRPTSTTNCKMTQPGQNFSTSTGEIYVETWFDLKDSKLLKQVFTKYGCVPSRRLVSKETWILIN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.