NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F057343

Metagenome / Metatranscriptome Family F057343

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F057343
Family Type Metagenome / Metatranscriptome
Number of Sequences 136
Average Sequence Length 43 residues
Representative Sequence EEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALAKLGTYQKK
Number of Associated Samples 118
Number of Associated Scaffolds 136

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.91 %
% of genes near scaffold ends (potentially truncated) 86.03 %
% of genes from short scaffolds (< 2000 bps) 83.09 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.647 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.529 % of family members)
Environment Ontology (ENVO) Unclassified
(27.206 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.265 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.14%    β-sheet: 0.00%    Coil/Unstructured: 62.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 136 Family Scaffolds
PF00005ABC_tran 82.35
PF00528BPD_transp_1 6.62
PF02738MoCoBD_1 2.21
PF09084NMT1 1.47
PF00353HemolysinCabind 1.47
PF03401TctC 0.74
PF04326AlbA_2 0.74
PF12833HTH_18 0.74
PF01977UbiD 0.74
PF01494FAD_binding_3 0.74
PF00589Phage_integrase 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 136 Family Scaffolds
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.47
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.47
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.47
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 0.74
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.74
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.74
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.74
COG2865Predicted transcriptional regulator, contains HTH domainTranscription [K] 0.74
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.74


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.38 %
UnclassifiedrootN/A6.62 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459004|F62QY1Z01D8BLLAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium501Open in IMG/M
2170459013|GO6OHWN01AEJJ2Not Available504Open in IMG/M
2228664021|ICCgaii200_c0935646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria644Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1034524All Organisms → cellular organisms → Bacteria → Proteobacteria926Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1038624All Organisms → cellular organisms → Bacteria → Proteobacteria867Open in IMG/M
3300000732|JGI12023J11887_1006232All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria681Open in IMG/M
3300000793|AF_2010_repII_A001DRAFT_10017039All Organisms → cellular organisms → Bacteria1752Open in IMG/M
3300001164|JGI11823J13286_1006937All Organisms → cellular organisms → Bacteria → Proteobacteria785Open in IMG/M
3300001661|JGI12053J15887_10078459All Organisms → cellular organisms → Bacteria → Proteobacteria1822Open in IMG/M
3300001867|JGI12627J18819_10222339All Organisms → cellular organisms → Bacteria → Proteobacteria761Open in IMG/M
3300001977|JGI24746J21847_1023003All Organisms → cellular organisms → Bacteria → Proteobacteria867Open in IMG/M
3300002239|JGI24034J26672_10028412All Organisms → cellular organisms → Bacteria → Proteobacteria903Open in IMG/M
3300004267|Ga0066396_10010467All Organisms → cellular organisms → Bacteria → Proteobacteria1101Open in IMG/M
3300004629|Ga0008092_11309719All Organisms → cellular organisms → Bacteria → Proteobacteria603Open in IMG/M
3300005168|Ga0066809_10207903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria531Open in IMG/M
3300005332|Ga0066388_100358175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2105Open in IMG/M
3300005332|Ga0066388_108285100All Organisms → cellular organisms → Bacteria → Proteobacteria518Open in IMG/M
3300005332|Ga0066388_108454851All Organisms → cellular organisms → Bacteria → Proteobacteria513Open in IMG/M
3300005434|Ga0070709_11780961All Organisms → cellular organisms → Bacteria → Proteobacteria504Open in IMG/M
3300005534|Ga0070735_10708089All Organisms → cellular organisms → Bacteria → Proteobacteria595Open in IMG/M
3300005543|Ga0070672_100034365All Organisms → cellular organisms → Bacteria3847Open in IMG/M
3300005566|Ga0066693_10265042All Organisms → cellular organisms → Bacteria → Proteobacteria682Open in IMG/M
3300005568|Ga0066703_10663852All Organisms → cellular organisms → Bacteria → Proteobacteria602Open in IMG/M
3300005764|Ga0066903_100005400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales11083Open in IMG/M
3300006028|Ga0070717_10770494All Organisms → cellular organisms → Bacteria → Proteobacteria875Open in IMG/M
3300006032|Ga0066696_10671150All Organisms → cellular organisms → Bacteria → Proteobacteria668Open in IMG/M
3300006034|Ga0066656_10653140All Organisms → cellular organisms → Bacteria → Proteobacteria678Open in IMG/M
3300006038|Ga0075365_10015017All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4673Open in IMG/M
3300006038|Ga0075365_10169667All Organisms → cellular organisms → Bacteria1523Open in IMG/M
3300006577|Ga0074050_11984214All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria621Open in IMG/M
3300006605|Ga0074057_11652514All Organisms → cellular organisms → Bacteria → Proteobacteria539Open in IMG/M
3300006800|Ga0066660_10231623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1431Open in IMG/M
3300006800|Ga0066660_10431101All Organisms → cellular organisms → Bacteria → Proteobacteria1097Open in IMG/M
3300006854|Ga0075425_102680012All Organisms → cellular organisms → Bacteria → Proteobacteria550Open in IMG/M
3300006953|Ga0074063_10061479All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300009094|Ga0111539_10425313All Organisms → cellular organisms → Bacteria → Proteobacteria1547Open in IMG/M
3300009100|Ga0075418_10526205All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1270Open in IMG/M
3300009789|Ga0126307_11074019All Organisms → cellular organisms → Bacteria → Proteobacteria651Open in IMG/M
3300010046|Ga0126384_10856037All Organisms → cellular organisms → Bacteria → Proteobacteria818Open in IMG/M
3300010360|Ga0126372_12062123All Organisms → cellular organisms → Bacteria → Proteobacteria618Open in IMG/M
3300010366|Ga0126379_12236292All Organisms → cellular organisms → Bacteria → Proteobacteria648Open in IMG/M
3300010376|Ga0126381_102280040All Organisms → cellular organisms → Bacteria → Proteobacteria778Open in IMG/M
3300010398|Ga0126383_10305436All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1591Open in IMG/M
3300010398|Ga0126383_12970077All Organisms → cellular organisms → Bacteria → Proteobacteria554Open in IMG/M
3300010868|Ga0124844_1133945All Organisms → cellular organisms → Bacteria → Proteobacteria943Open in IMG/M
3300011271|Ga0137393_10952354All Organisms → cellular organisms → Bacteria → Proteobacteria732Open in IMG/M
3300012189|Ga0137388_10155482All Organisms → cellular organisms → Bacteria → Proteobacteria2029Open in IMG/M
3300012202|Ga0137363_10918274All Organisms → cellular organisms → Bacteria → Proteobacteria743Open in IMG/M
3300012359|Ga0137385_10659584All Organisms → cellular organisms → Bacteria → Proteobacteria876Open in IMG/M
3300012359|Ga0137385_10707236All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium841Open in IMG/M
3300012908|Ga0157286_10349932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria557Open in IMG/M
3300012927|Ga0137416_11838519All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium554Open in IMG/M
3300012939|Ga0162650_100059983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria636Open in IMG/M
3300012943|Ga0164241_10561934All Organisms → cellular organisms → Bacteria → Proteobacteria824Open in IMG/M
3300012977|Ga0134087_10788231All Organisms → cellular organisms → Bacteria → Proteobacteria513Open in IMG/M
3300013306|Ga0163162_12036690All Organisms → cellular organisms → Bacteria → Proteobacteria658Open in IMG/M
3300013306|Ga0163162_12273906All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria623Open in IMG/M
3300013308|Ga0157375_13029168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria561Open in IMG/M
3300015373|Ga0132257_104427725All Organisms → cellular organisms → Bacteria → Proteobacteria511Open in IMG/M
3300016270|Ga0182036_10187040All Organisms → cellular organisms → Bacteria → Proteobacteria1507Open in IMG/M
3300016341|Ga0182035_12101624All Organisms → cellular organisms → Bacteria → Proteobacteria513Open in IMG/M
3300016387|Ga0182040_10989734All Organisms → cellular organisms → Bacteria → Proteobacteria701Open in IMG/M
3300016404|Ga0182037_10467376All Organisms → cellular organisms → Bacteria → Proteobacteria1052Open in IMG/M
3300016404|Ga0182037_11467405All Organisms → cellular organisms → Bacteria → Proteobacteria604Open in IMG/M
3300016422|Ga0182039_10180163All Organisms → cellular organisms → Bacteria → Proteobacteria1667Open in IMG/M
3300020005|Ga0193697_1115160All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium630Open in IMG/M
3300020581|Ga0210399_10113947All Organisms → cellular organisms → Bacteria → Proteobacteria2218Open in IMG/M
3300021073|Ga0210378_10161347All Organisms → cellular organisms → Bacteria → Proteobacteria863Open in IMG/M
3300021432|Ga0210384_10346976All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1337Open in IMG/M
3300021560|Ga0126371_10350107All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → Bordetella flabilis1612Open in IMG/M
3300021560|Ga0126371_11462277All Organisms → cellular organisms → Bacteria → Proteobacteria813Open in IMG/M
3300021560|Ga0126371_11848554All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria724Open in IMG/M
3300021861|Ga0213853_10159131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria654Open in IMG/M
3300021861|Ga0213853_11488880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria799Open in IMG/M
3300025321|Ga0207656_10088327All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1403Open in IMG/M
3300026305|Ga0209688_1076982All Organisms → cellular organisms → Bacteria → Proteobacteria602Open in IMG/M
3300026550|Ga0209474_10029323All Organisms → cellular organisms → Bacteria → Proteobacteria4145Open in IMG/M
3300026552|Ga0209577_10106500All Organisms → cellular organisms → Bacteria → Proteobacteria2264Open in IMG/M
3300027381|Ga0208983_1102716All Organisms → cellular organisms → Bacteria → Proteobacteria527Open in IMG/M
3300027383|Ga0209213_1001661All Organisms → cellular organisms → Bacteria → Proteobacteria3565Open in IMG/M
3300027502|Ga0209622_1033298All Organisms → cellular organisms → Bacteria → Proteobacteria921Open in IMG/M
3300027616|Ga0209106_1148909All Organisms → cellular organisms → Bacteria → Proteobacteria522Open in IMG/M
3300027775|Ga0209177_10499748All Organisms → cellular organisms → Bacteria → Proteobacteria507Open in IMG/M
3300027873|Ga0209814_10414003All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.593Open in IMG/M
3300027880|Ga0209481_10263854All Organisms → cellular organisms → Bacteria → Proteobacteria869Open in IMG/M
3300027882|Ga0209590_10751823All Organisms → cellular organisms → Bacteria → Proteobacteria622Open in IMG/M
3300027903|Ga0209488_10594675All Organisms → cellular organisms → Bacteria → Proteobacteria803Open in IMG/M
3300027909|Ga0209382_10066921All Organisms → cellular organisms → Bacteria → Proteobacteria4249Open in IMG/M
3300028708|Ga0307295_10139286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria669Open in IMG/M
3300028712|Ga0307285_10003532All Organisms → cellular organisms → Bacteria → Proteobacteria3093Open in IMG/M
3300028712|Ga0307285_10114219All Organisms → cellular organisms → Bacteria → Proteobacteria721Open in IMG/M
3300028720|Ga0307317_10063039All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1201Open in IMG/M
3300028754|Ga0307297_10183562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria726Open in IMG/M
3300028778|Ga0307288_10345490All Organisms → cellular organisms → Bacteria → Proteobacteria598Open in IMG/M
3300028872|Ga0307314_10130587All Organisms → cellular organisms → Bacteria → Proteobacteria711Open in IMG/M
3300031198|Ga0307500_10250809All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria546Open in IMG/M
3300031545|Ga0318541_10371874All Organisms → cellular organisms → Bacteria → Proteobacteria798Open in IMG/M
3300031546|Ga0318538_10125794All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1341Open in IMG/M
3300031561|Ga0318528_10540621All Organisms → cellular organisms → Bacteria → Proteobacteria625Open in IMG/M
3300031572|Ga0318515_10460917All Organisms → cellular organisms → Bacteria → Proteobacteria679Open in IMG/M
3300031640|Ga0318555_10072050All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1787Open in IMG/M
3300031640|Ga0318555_10489805All Organisms → cellular organisms → Bacteria → Proteobacteria666Open in IMG/M
3300031640|Ga0318555_10629963All Organisms → cellular organisms → Bacteria → Proteobacteria580Open in IMG/M
3300031668|Ga0318542_10452548All Organisms → cellular organisms → Bacteria → Proteobacteria665Open in IMG/M
3300031680|Ga0318574_10002404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7251Open in IMG/M
3300031682|Ga0318560_10064324All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1837Open in IMG/M
3300031751|Ga0318494_10048326All Organisms → cellular organisms → Bacteria → Proteobacteria2241Open in IMG/M
3300031764|Ga0318535_10247261All Organisms → cellular organisms → Bacteria → Proteobacteria798Open in IMG/M
3300031770|Ga0318521_10370406All Organisms → cellular organisms → Bacteria → Proteobacteria851Open in IMG/M
3300031778|Ga0318498_10098701All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1323Open in IMG/M
3300031795|Ga0318557_10271033All Organisms → cellular organisms → Bacteria → Proteobacteria778Open in IMG/M
3300031820|Ga0307473_10987026All Organisms → cellular organisms → Bacteria → Proteobacteria614Open in IMG/M
3300031846|Ga0318512_10392932All Organisms → cellular organisms → Bacteria → Proteobacteria696Open in IMG/M
3300031897|Ga0318520_10574711All Organisms → cellular organisms → Bacteria → Proteobacteria699Open in IMG/M
3300031897|Ga0318520_10827478All Organisms → cellular organisms → Bacteria → Proteobacteria581Open in IMG/M
3300031941|Ga0310912_10927986All Organisms → cellular organisms → Bacteria → Proteobacteria669Open in IMG/M
3300031943|Ga0310885_10897851All Organisms → cellular organisms → Bacteria → Proteobacteria508Open in IMG/M
3300032039|Ga0318559_10102418All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1269Open in IMG/M
3300032044|Ga0318558_10212726All Organisms → cellular organisms → Bacteria → Proteobacteria945Open in IMG/M
3300032054|Ga0318570_10554780All Organisms → cellular organisms → Bacteria → Proteobacteria524Open in IMG/M
3300032055|Ga0318575_10066922All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella1686Open in IMG/M
3300032063|Ga0318504_10594412All Organisms → cellular organisms → Bacteria → Proteobacteria531Open in IMG/M
3300032075|Ga0310890_11053274All Organisms → cellular organisms → Bacteria → Proteobacteria656Open in IMG/M
3300032090|Ga0318518_10007273All Organisms → cellular organisms → Bacteria → Proteobacteria4409Open in IMG/M
3300032090|Ga0318518_10022418All Organisms → cellular organisms → Bacteria → Proteobacteria2800Open in IMG/M
3300032122|Ga0310895_10379664All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria687Open in IMG/M
3300032261|Ga0306920_100899639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1294Open in IMG/M
3300034163|Ga0370515_0330900All Organisms → cellular organisms → Bacteria → Proteobacteria644Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.35%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.41%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.21%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds1.47%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.47%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.47%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.47%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.47%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.74%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.74%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.74%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.74%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.74%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.74%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.74%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.74%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.74%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459004Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)EnvironmentalOpen in IMG/M
2170459013Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cmEnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300000732Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2EnvironmentalOpen in IMG/M
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300001164Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300001977Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5Host-AssociatedOpen in IMG/M
3300002239Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2Host-AssociatedOpen in IMG/M
3300004267Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBioEnvironmentalOpen in IMG/M
3300004629Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006577Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012939Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027502Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4B_007859902170459004Grass SoilVNGGLDPAIEEFTADLNVKLGNLPVAAPAKDVLEPRFVERALATLGNYQSK
N57_016870002170459013Grass SoilNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK
ICCgaii200_093564622228664021SoilFTANLNMKLGNLPIAPPAKDVLEPRFVDAALKRLGPYQKK
AF_2010_repII_A100DRAFT_103452413300000655Forest SoilADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK*
AF_2010_repII_A100DRAFT_103862423300000655Forest SoilEEFTADLNMKLGNLPVAPPPKDVLEPRFVDHALAKLGSYQKK*
JGI12023J11887_100623223300000732Forest SoilAVEEFTANLNMKLGNLPVAPPAKDVLEPRFVDAALKQLGPYQKK*
AF_2010_repII_A001DRAFT_1001703933300000793Forest SoilTADLNMKLGNLPVAPPPKDVLEPRFVDHALAKLGSYQKK*
JGI11823J13286_100693713300001164Forest SoilNMKLGNLPVAPPAKDVLEPRFVDAALKQLGPYQKK*
JGI12053J15887_1007845923300001661Forest SoilNGGLDPAIEEFTAELNMKLGNLPVAPKASDILDXRFVDAALKKLGTYQTK*
JGI12627J18819_1022233913300001867Forest SoilLNMKLGNLPVAAPPKDVLEPRFVDRALAKLGTHQKK*
JGI24746J21847_102300313300001977Corn, Switchgrass And Miscanthus RhizosphereGVNGGLDPAIEEFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK*
JGI24034J26672_1002841223300002239Corn, Switchgrass And Miscanthus RhizosphereEEFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK*
Ga0066396_1001046713300004267Tropical Forest SoilDPAIEEFTAELNMKLGNLPVAAPAKDVLEPRFVDRALAKLGTYRKN*
Ga0008092_1130971913300004629Tropical Rainforest SoilGGLDPAIEEFTADLNVKLGNLPVAAPAKDVLEPRFVDRALATLGNYQTK*
Ga0066809_1020790323300005168SoilLDPAIEEFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK*
Ga0066388_10035817523300005332Tropical Forest SoilVDGGLDPAVEEFTADLNMKLGNLPVAPPPKDVLEPRFVDRALAKLGAYQKK*
Ga0066388_10828510023300005332Tropical Forest SoilDPAIEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALATLGNYQTK*
Ga0066388_10845485123300005332Tropical Forest SoilAIEEFTADLNMKLGNLPVAAPAKDVLDPRFVEAALKKLGSYKKK*
Ga0070709_1178096123300005434Corn, Switchgrass And Miscanthus RhizosphereEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALAKLGTYQKK*
Ga0070735_1070808913300005534Surface SoilVKLGNLTAAPPEKDVLDPRFVDVALKKLGPYQKK*
Ga0070672_10003436513300005543Miscanthus RhizosphereFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK*
Ga0066693_1026504223300005566SoilIEEFTADLNMKLGNLPVAPPPKDVLEPRFVDRALAKLGTYQKK*
Ga0066703_1066385223300005568SoilVKLGNLPVAARAKDVLEPRFVERALATLGNYQTK*
Ga0066903_10000540013300005764Tropical Forest SoilGGLDPAVEEFTADLNKKLGNLPVAPAPSEVLDQRFVQAALKKLGPAGGR*
Ga0070717_1041840713300006028Corn, Switchgrass And Miscanthus RhizosphereWGVNGGLDPAIEEFTADLNVKLGNLPVAARAKDVLEPRFVERALATLGNYQTK*
Ga0070717_1077049413300006028Corn, Switchgrass And Miscanthus RhizosphereAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK*
Ga0066696_1067115013300006032SoilELNMKLGNLPVAVPAKDVLEARFVEAALKKFGPYQKQ*
Ga0066656_1065314023300006034SoilLNVKLGNLPVAARAKDVLEPRFVERALATLGNYQTK*
Ga0075365_1001501753300006038Populus EndosphereVDGGLDPAIEQFTADLNMQLGNLPVAPAASAVLEARFVDAALKRLGSYQKK*
Ga0075365_1016966713300006038Populus EndosphereEEFTADLNMKLGNLPVAPPAKDVLEPRFVDTSLKKFGPYQAK*
Ga0074050_1198421423300006577SoilIEEFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK*
Ga0074057_1165251423300006605SoilIEEFTADLNVKLGNLPVAAPAKDVLEPRFVERALATLGNYQSK*
Ga0066660_1023162313300006800SoilNMKLGNLPVAVPAKDVLEARFVEAALKKFGPYQKQ*
Ga0066660_1043110113300006800SoilTADLNMKLGNLPVAPAPKDVLEPRFVDAALMKLGRYQKK*
Ga0075425_10268001223300006854Populus RhizosphereDGGLDPKIEEFTAELNMKLGNLPVAAPAKDVLDPRFVDAALKKLGGYKKK*
Ga0074063_1006147913300006953SoilDLNMKLGNLPVAPPPKDVLEPRFVTAAIRKLGAYQNR*
Ga0099828_1012226543300009089Vadose Zone SoilWGVNGGLDPAIEEFTADLNVKLGNLPVAAPAKDVLEPRFVERALATLGNYQSK*
Ga0111539_1042531323300009094Populus RhizosphereMQLGNLPVAPAASAVLEARFVDAALKRLGSYQKK*
Ga0075418_1052620513300009100Populus RhizosphereMKLGNLPVAAPAKDVLEQRFVEAALNKLGVYRKQ*
Ga0126307_1107401913300009789Serpentine SoilDLNVKLGNLPVAAPAKDVLDTRFVDAALNRLGAYPKN*
Ga0126384_1085603713300010046Tropical Forest SoilFTADLNMKLGNLPVAPPPKDVLEPRFVDHALAKLGSYQKK*
Ga0126372_1206212323300010360Tropical Forest SoilPAIEEFTAELNMKLGNLPVAAPPKDVLEPRFVERALAKLGSYRKN*
Ga0126379_1223629213300010366Tropical Forest SoilELNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK*
Ga0126381_10228004013300010376Tropical Forest SoilTADLNMKLGNLPVALPAQDVLDQRFVAAAIRKLGQYQQ*
Ga0126383_1030543633300010398Tropical Forest SoilEEYTADLNMKLGNLPVALPAQDVLDQRFVAAAIRKLGQYQQ*
Ga0126383_1297007723300010398Tropical Forest SoilEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK*
Ga0124844_113394523300010868Tropical Forest SoilMKLGNLPVAPPAKDVLEPRFVDRALAKLGRYQTK*
Ga0137393_1095235423300011271Vadose Zone SoilGVNGGLDPAIEEFTAELNMKLGNLPVAAPAKDVLDPRFVEAALKKLGKYQKK*
Ga0137388_1015548213300012189Vadose Zone SoilKIEEFTADLNVKLGNLPRAATPAEVLDPRFVDAALKKLGPSKK*
Ga0137363_1091827413300012202Vadose Zone SoilTADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQTK*
Ga0137385_1065958423300012359Vadose Zone SoilLNVKLGNLPVAAPAKDVLEPRFVERALATLGNYQSK*
Ga0137385_1070723613300012359Vadose Zone SoilMKLGNLPVAAPAKDVLEPGFVERALAKLGTYQKK*
Ga0157286_1034993223300012908SoilGGLDPAVEEFTADLNMKLGNLPVAPPAKDVLEPRFVDAALKKFGPYQAK*
Ga0137416_1183851923300012927Vadose Zone SoilVDGGLDPAVEEFTANLNMKLGNLPIAPPAKDVLEPRFVDAALKQLGPYQKK*
Ga0162650_10005998323300012939SoilGRRRDRQVAELNMKLGNLPVAPAAKDVLEPRFVDAALRKLGPYQAK*
Ga0164241_1056193423300012943SoilGLDPAIEEFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK*
Ga0134087_1078823113300012977Grasslands SoilDPKIEEFTAELNMKLGNLPVVVPAKDVLEPRFVEAALKKFGPYQKQ*
Ga0163162_1203669023300013306Switchgrass RhizosphereVDGGLDPAVEEFTADLNMKLGNLPVAAPAKDVLEPRFVERALAKLGTHQKK*
Ga0163162_1227390623300013306Switchgrass RhizosphereDPAIEKFTAELNMKLGNLPVAPAAKDVFEPRFVDAALKKLGPYQAK*
Ga0157375_1302916823300013308Miscanthus RhizosphereNGGLDPAVEEFTADLNMKLGNLPVAPPAKDVLEPRFVDTSLKKFGPYQAK*
Ga0132257_10442772513300015373Arabidopsis RhizosphereTAALNKELGNLPVAAPASDVREQHFVAAAMKKLGPYQKK*
Ga0182036_1018704033300016270SoilEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0182035_1210162423300016341SoilWGVNGGLDPAIEEFTADLNMKLGNLPVAPPAKDVLEPRFVNHALATLGSYQTK
Ga0182040_1098973413300016387SoilDPAIEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0182037_1046737613300016404SoilDLNMKLGNLPVAAPAKDVLEPRFVERALATLGSYQTK
Ga0182037_1146740523300016404SoilDLNMKLGNLPVAPPAKDVLEPRFVDRALATLGGYQTK
Ga0182039_1018016333300016422SoilLDPAIEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0193697_111516023300020005SoilEFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK
Ga0210399_1011394713300020581SoilLDPAIEEFTADLNVKLGNLPVAAPAKEVLEPRFVERALATLGNYQTK
Ga0210378_1016134713300021073Groundwater SedimentPAIQEFTADLNMKLGNLPVAAPAKDVLEQRFVEAALNKLGVYRKQ
Ga0210384_1034697633300021432SoilPAIEEFTADLNVKLGNLPVAAPAKDVLEPRFVERALATLGNYQTK
Ga0210410_1095094223300021479SoilNVWGVDGGLDPAVEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALVKLGTYQKK
Ga0126371_1035010733300021560Tropical Forest SoilEEFTADLNMKLGNLPVAPPAKDVLEPRFVDRALAKLGRYQTK
Ga0126371_1146227723300021560Tropical Forest SoilAELNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0126371_1184855423300021560Tropical Forest SoilADLNVKLGNLPVAAPAKDVLEPRFVDRALATLGNYQTK
Ga0213853_1015913123300021861WatershedsDTAGLNVKLGNLPVAAPAADVLDRRFVESALGKLGPYRRK
Ga0213853_1148888013300021861WatershedsIYHDTADLNIKLGNLPMAAPAKAVLEPRFVEAAIGKLGPYRGK
Ga0207656_1008832733300025321Corn RhizosphereVNGGLDPAIDEFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK
Ga0207684_1003967143300025910Corn, Switchgrass And Miscanthus RhizosphereWGVNGGLDPAIEEFTADLNVKLGNLPVAAPAKDVLEPRFVERALATLGNYQSK
Ga0209688_107698213300026305SoilLNMKLGNLPVAPPPKDVLEPRFVDRALAKLGTYQKK
Ga0209474_1002932313300026550SoilDLNMKLGNLPVAPPPKDVLEPRFVDRALAKLGTYQKK
Ga0209577_1010650013300026552SoilNMKLGNLPVAVPAKDVLEARFVEAALKKFGPYQKQ
Ga0208983_110271613300027381Forest SoilADLNMRLGNLPVAPPAKDVLDARFVDAALKQLGTYQKK
Ga0209213_100166113300027383Forest SoilANLNMKLGNLPVAPPAKDVLEPRFVDAALKQLGPYQKK
Ga0209622_103329823300027502Forest SoilAIEEFTADLNVKLGNLPVAAPAKDVLEPRFVERALATLGNYQTK
Ga0209106_114890923300027616Forest SoilFTADLNMRLGNLPVAPPAKDVLDARFVDAALKQLGTYQKK
Ga0209177_1049974813300027775Agricultural SoilDLNMKLGNLPVAPPPKDVLEPRFVDHALAKLGSYQKK
Ga0209814_1041400323300027873Populus RhizosphereGVNGGLDPAIEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQTK
Ga0209481_1026385413300027880Populus RhizosphereVNGGLDPAIQEFTADLNMKLGNLPVAAPAKDVLEQRFVEAALNKLGVYRKQ
Ga0209590_1075182313300027882Vadose Zone SoilEEFTAELNMRLGNLPVAIPAKDVLDQRFVEAALKKLGTYRKQ
Ga0209488_1059467513300027903Vadose Zone SoilDPAIEEFTADLNMKLGNLPVAPPAKDVLDARFVDAALKQLGTYQKK
Ga0209382_1006692133300027909Populus RhizosphereVDGGLDPAIEQFTADLNMQLGNLPVAPAASAVLEARFVDAALKRLGSYQKK
Ga0307295_1013928623300028708SoilEEFTANLNMKLGNLPIAPPAKDVLEPRFVDAALKQLGPYQKK
Ga0307285_1000353223300028712SoilVFDGAYSVQLSDPAVEEFTANLNMKLGNLPIAPPAKDILEPRFVDAALKQLGPYQKK
Ga0307285_1011421913300028712SoilTAELNMKLGNLPVAPAAKDVLDPRFVDAALKKLGPYQAK
Ga0307317_1006303933300028720SoilGGLDPAVEEFTANLNMKLGNLPIAPPAKDILEPRFVDAALKQLGPYQKK
Ga0307297_1018356213300028754SoilAIEEFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK
Ga0307288_1034549023300028778SoilDGAYSVQLSDPAVEEFTANLNMKLGNLPIAPPAKDILEPRFVDAALKQLGPYQKK
Ga0307314_1013058713300028872SoilGGLDPAVEEFTANLNMKLGNLPIAPPAKDVLEPRFVDAALKQLGPYQKK
Ga0307500_1025080913300031198SoilFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK
Ga0318541_1037187423300031545SoilVNGGLDPAIEEFTADLNMKLGNLPVAAPAKDVLEPRFVERALATLGSYQTK
Ga0318538_1012579433300031546SoilLNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318528_1054062123300031561SoilELNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318515_1046091713300031572SoilNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318555_1007205013300031640SoilRSQINARRKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318555_1048980513300031640SoilEEFTAELNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318555_1062996323300031640SoilAIEEFTADLNMKLGNLPVAPPAKDVLEPRFVDRALATLGGYQTK
Ga0318542_1045254813300031668SoilARRKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318574_1000240473300031680SoilVSWKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318560_1006432433300031682SoilVWGVNGGLDPAIEEFTADLNMKLGNLPVAPPAKDVLEPRFVDRALATLGGYQTK
Ga0306918_1058175923300031744SoilWGVNGGLDPAIEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0318494_1004832613300031751SoilQNNSRRKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318535_1024726123300031764SoilGVNGGLDPAIEEFTAELNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318521_1037040613300031770SoilLNMKLGNLPIAPPAKDVLEPRFVDRALAKLGRHQTK
Ga0318498_1009870113300031778SoilLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0318557_1027103313300031795SoilNVWGVNGGLDPAIEEFTADLNMKLGNLPVAPPAKDVLEPRFVNHALATLGSYQTK
Ga0307473_1098702623300031820Hardwood Forest SoilDPAIEEFTADLNMKLGNLPVAAPAKDVLDARFVESALKTLGPYQKK
Ga0318512_1039293223300031846SoilTAELNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318520_1057471123300031897SoilIEEFTAELNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318520_1082747813300031897SoilLNMKLGNLPVAAPAKDVLERRFVDRALEKLGSYQAK
Ga0310912_1092798613300031941SoilWGVNGGLDPAIEEFTAELNMKLGNLPLAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0310885_1089785113300031943SoilYTATLNKELGNLPVAAPASDVLEQRFVEAAMTKLGPYKKK
Ga0318507_1012113433300032025SoilVWGVNGGLDPAIEEFTADLNVKLGNLPVAAPAKDVLEPRFVDRALATLGNYQTK
Ga0318559_1010241813300032039SoilDLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0318558_1021272613300032044SoilVNGGLDTKIEEFTAELNMKLGNLPVAVPAKDVLESRFVEAALKNFGLYQKN
Ga0318532_1018045713300032051SoilNVWGVNGGLDPAIEEFTAELNMKLGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0318570_1055478023300032054SoilGINGGLDPAVEEFTADLNMKLGNLPIAPPAKDVLEPRFVDRALAKLGRHQTK
Ga0318575_1006692233300032055SoilNGGLDPAIEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0318504_1059441223300032063SoilINLTGKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0318524_1021662513300032067SoilNVWGVNGGLDPAIEEFTADLNMKLGNLPVAAPAKDVLEPRFVDRALEKLGSYQAK
Ga0310890_1105327423300032075SoilVDGGIDPKIQEYTATLNKELGNLPVAAPASDVLDQRFVAAAMTKLGPYKKK
Ga0318518_1000727313300032090SoilDPKIEEFTAELNMKLGNLPVAVPAKDVLESRFVEAALKNFGLYQKN
Ga0318518_1002241813300032090SoilLHVELGNLPVAAPAKDVLEPRFVDRALAKLGSYQAK
Ga0310895_1037966413300032122SoilDPAVEEFTAELNMKLGNLPVAPAAKDVLEPRFVDAALKKLGPYQAK
Ga0306920_10089963913300032261SoilMPAMKLGNLPVAAPAKDVLEPRFVDRALATLGNYQTK
Ga0370515_0330900_2_1363300034163Untreated Peat SoilKVEEFTADLNVKLGNLTTAPAPKDVLDTRYVDVAMKKLGPYEQK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.