Metagenome Family F057264

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057264
Family Type	Metagenome
Number of Sequences	136
Average Sequence Length	72 residues
Representative Sequence	MQRSLAAEWAALDGHFEHHAKLVDRFRGADRVAVARMWRSQTNECGNRLSQFEREALIERHCELFGTWPD
Number of Associated Samples	76
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.94 %
% of genes near scaffold ends (potentially truncated)	31.62 %
% of genes from short scaffolds (< 2000 bps)	81.62 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.912 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (48.529 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.265 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.96% β-sheet: 2.04% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
e.11.1.0: automated matches	d3ilwa_	3ilw	0.62129
c.37.1.19: Tandem AAA-ATPase domain	d1tf5a3	1tf5	0.62041
a.4.5.34: SCF ubiquitin ligase complex WHB domain	d1ldja1	1ldj	0.61857
a.100.1.1: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain	d2cvza1	2cvz	0.60436
f.57.1.1: MgtE membrane domain-like	d2zy9a3	2zy9	0.60419

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF14559	TPR_19	3.68
PF03705	CheR_N	2.21
PF13701	DDE_Tnp_1_4	2.21
PF07045	DUF1330	1.47
PF06823	DUF1236	1.47
PF00768	Peptidase_S11	1.47
PF07730	HisKA_3	1.47
PF01740	STAS	0.74
PF00924	MS_channel	0.74
PF00589	Phage_integrase	0.74
PF13005	zf-IS66	0.74
PF08592	Anthrone_oxy	0.74
PF13424	TPR_12	0.74
PF08974	DUF1877	0.74
PF02518	HATPase_c	0.74
PF07883	Cupin_2	0.74
PF12395	DUF3658	0.74
PF03928	HbpS-like	0.74
PF08447	PAS_3	0.74
PF13365	Trypsin_2	0.74
PF13360	PQQ_2	0.74
PF02586	SRAP	0.74
PF04191	PEMT	0.74
PF13429	TPR_15	0.74
PF01609	DDE_Tnp_1	0.74
PF01339	CheB_methylest	0.74
PF03729	DUF308	0.74
PF12705	PDDEXK_1	0.74
PF00816	Histone_HNS	0.74
PF13432	TPR_16	0.74
PF00496	SBP_bac_5	0.74
PF09678	Caa3_CtaG	0.74
PF00106	adh_short	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	4.41
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.47
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.47
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.47
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.47
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.47
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.47
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.47
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.74
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.74
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.74
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.74
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.74
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.74
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.74
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.74
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.74
COG2916	DNA-binding protein H-NS	Transcription [K]	0.74
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.91 %
Unclassified	root	N/A	8.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.91 %
Unclassified	root	N/A	8.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.91 %
Unclassified	root	N/A	8.09 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.56 %
Unclassified	root	N/A	8.09 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	77.94 %
Unclassified	root	N/A	8.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	64.71 %
Unclassified	root	N/A	8.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.62 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.71 %
Unclassified	root	N/A	8.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.21 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.74 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.74 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.71 %
Unclassified	root	N/A	8.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.47 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.74 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.74 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.71 %
Unclassified	root	N/A	8.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.47 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.74 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.74 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.71 %
Unclassified	root	N/A	8.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.47 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	0.74 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.74 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.71 %
Unclassified	root	N/A	8.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.47 %
Nocardia sp. 348MFTsu5.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. 348MFTsu5.1	0.74 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.74 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_104851264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300004114\|Ga0062593_101900979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300004156\|Ga0062589_101430805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	676	Open in IMG/M
3300004479\|Ga0062595_101227357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300004479\|Ga0062595_101247706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300004633\|Ga0066395_10343122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. 348MFTsu5.1	828	Open in IMG/M
3300004633\|Ga0066395_10670738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300005093\|Ga0062594_103243189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300005332\|Ga0066388_100198997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2623	Open in IMG/M
3300005332\|Ga0066388_100613844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1708	Open in IMG/M
3300005332\|Ga0066388_100666566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1653	Open in IMG/M
3300005332\|Ga0066388_101043836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1375	Open in IMG/M
3300005332\|Ga0066388_101696016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1118	Open in IMG/M
3300005332\|Ga0066388_102482726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	942	Open in IMG/M
3300005332\|Ga0066388_103799698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300005332\|Ga0066388_103825904	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005332\|Ga0066388_104077770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300005332\|Ga0066388_106031496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300005332\|Ga0066388_106711700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300005333\|Ga0070677_10628676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300005338\|Ga0068868_102063734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300005457\|Ga0070662_101635587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300005549\|Ga0070704_101405546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300005713\|Ga0066905_100308577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1246	Open in IMG/M
3300005713\|Ga0066905_101198710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300005764\|Ga0066903_100022051	All Organisms → cellular organisms → Bacteria	6840	Open in IMG/M
3300005764\|Ga0066903_100213022	All Organisms → cellular organisms → Bacteria	2914	Open in IMG/M
3300005764\|Ga0066903_100299018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2544	Open in IMG/M
3300005764\|Ga0066903_100804199	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300005764\|Ga0066903_101116659	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300005764\|Ga0066903_101403940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1312	Open in IMG/M
3300005764\|Ga0066903_101609082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1232	Open in IMG/M
3300005764\|Ga0066903_101785708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1174	Open in IMG/M
3300005764\|Ga0066903_103068592	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300005764\|Ga0066903_104243932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767	Open in IMG/M
3300005764\|Ga0066903_104462781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300005764\|Ga0066903_106611514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300005764\|Ga0066903_107043060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300005764\|Ga0066903_107960533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300006755\|Ga0079222_11280184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300006804\|Ga0079221_10768777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300006806\|Ga0079220_10910721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	684	Open in IMG/M
3300006854\|Ga0075425_100007507	All Organisms → cellular organisms → Bacteria	11536	Open in IMG/M
3300006871\|Ga0075434_102304398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300006904\|Ga0075424_102730620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300006954\|Ga0079219_10023144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2336	Open in IMG/M
3300006954\|Ga0079219_10670572	Not Available	780	Open in IMG/M
3300009098\|Ga0105245_10979567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300009148\|Ga0105243_11503783	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300009177\|Ga0105248_10134751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2786	Open in IMG/M
3300009792\|Ga0126374_10045616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2185	Open in IMG/M
3300010043\|Ga0126380_10098406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1747	Open in IMG/M
3300010043\|Ga0126380_10524550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300010043\|Ga0126380_11831041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300010046\|Ga0126384_10098402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2152	Open in IMG/M
3300010046\|Ga0126384_10170842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1694	Open in IMG/M
3300010046\|Ga0126384_10199982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1581	Open in IMG/M
3300010046\|Ga0126384_10661278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	922	Open in IMG/M
3300010047\|Ga0126382_10414997	All Organisms → cellular organisms → Bacteria → Proteobacteria	1055	Open in IMG/M
3300010047\|Ga0126382_10848389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300010358\|Ga0126370_10147839	All Organisms → cellular organisms → Bacteria → Proteobacteria	1708	Open in IMG/M
3300010358\|Ga0126370_12434580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300010359\|Ga0126376_10964036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300010359\|Ga0126376_11907148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300010359\|Ga0126376_12186251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300010361\|Ga0126378_10035428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4517	Open in IMG/M
3300010361\|Ga0126378_10555345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1263	Open in IMG/M
3300010362\|Ga0126377_11460000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300010362\|Ga0126377_12279126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300010362\|Ga0126377_12812785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300010366\|Ga0126379_10947718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300010397\|Ga0134124_10093381	All Organisms → cellular organisms → Bacteria → Proteobacteria	2606	Open in IMG/M
3300010398\|Ga0126383_10026859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4509	Open in IMG/M
3300010398\|Ga0126383_10257372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1717	Open in IMG/M
3300010398\|Ga0126383_10305917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1590	Open in IMG/M
3300010398\|Ga0126383_10605559	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300010398\|Ga0126383_10860078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	992	Open in IMG/M
3300010398\|Ga0126383_11420046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300010398\|Ga0126383_12274674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300010403\|Ga0134123_10132801	Not Available	2033	Open in IMG/M
3300010403\|Ga0134123_10441416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1207	Open in IMG/M
3300010403\|Ga0134123_10997507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300010868\|Ga0124844_1122278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M
3300012961\|Ga0164302_11491713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300012971\|Ga0126369_10907048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300012971\|Ga0126369_11971389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300012971\|Ga0126369_13632472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300014326\|Ga0157380_10134592	Not Available	2114	Open in IMG/M
3300015371\|Ga0132258_10028426	All Organisms → cellular organisms → Bacteria → Proteobacteria	12421	Open in IMG/M
3300015371\|Ga0132258_10048721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9675	Open in IMG/M
3300015371\|Ga0132258_10207909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4752	Open in IMG/M
3300015371\|Ga0132258_11991004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1461	Open in IMG/M
3300015372\|Ga0132256_101003927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	950	Open in IMG/M
3300015373\|Ga0132257_100622274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1336	Open in IMG/M
3300016270\|Ga0182036_10499971	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300016294\|Ga0182041_10226242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1507	Open in IMG/M
3300016319\|Ga0182033_10005353	All Organisms → cellular organisms → Bacteria → Proteobacteria	6848	Open in IMG/M
3300016371\|Ga0182034_11615405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300016422\|Ga0182039_10147326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1817	Open in IMG/M
3300016445\|Ga0182038_11859634	Not Available	544	Open in IMG/M
3300017792\|Ga0163161_11565076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300017959\|Ga0187779_10829469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300017974\|Ga0187777_11261812	Not Available	542	Open in IMG/M
3300017974\|Ga0187777_11347610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300021476\|Ga0187846_10319451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300025900\|Ga0207710_10174900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1051	Open in IMG/M
3300025906\|Ga0207699_10343915	Not Available	1051	Open in IMG/M
3300025925\|Ga0207650_11763793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300025927\|Ga0207687_10542397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	975	Open in IMG/M
3300025934\|Ga0207686_11320750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300025941\|Ga0207711_10166250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2000	Open in IMG/M
3300026023\|Ga0207677_11297610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300027874\|Ga0209465_10178305	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300027874\|Ga0209465_10242785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300028379\|Ga0268266_10264234	All Organisms → cellular organisms → Bacteria → Proteobacteria	1596	Open in IMG/M
3300031545\|Ga0318541_10811240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031719\|Ga0306917_10687923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300031719\|Ga0306917_11316052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300031748\|Ga0318492_10750929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031797\|Ga0318550_10643194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031845\|Ga0318511_10326925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300031890\|Ga0306925_10325856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1651	Open in IMG/M
3300031910\|Ga0306923_11055630	All Organisms → cellular organisms → Bacteria → Proteobacteria	878	Open in IMG/M
3300031912\|Ga0306921_12066363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300031942\|Ga0310916_11421455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300031945\|Ga0310913_11054599	Not Available	569	Open in IMG/M
3300031946\|Ga0310910_11535272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300031954\|Ga0306926_10195530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2510	Open in IMG/M
3300032001\|Ga0306922_10141124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2573	Open in IMG/M
3300032091\|Ga0318577_10534425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300032261\|Ga0306920_101247293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1072	Open in IMG/M
3300032261\|Ga0306920_103815197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.35%
Host-Associated	Host-Associated	17.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.35%
Plants	Host-Associated → Plants	17.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.88%
Cave	Environmental → Terrestrial → Cave	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.41%
Loam	Environmental → Terrestrial → Soil → Loam	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.21%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	23.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1048512642	3300000955	Soil	LREDSLVTASLTADWAALDDHFREQAKHIERFRRADRIAVRRMWECQTDELGNDLSEFEREALIERHCELFGTWPD*
Ga0062593_1019009792	3300004114	Soil	MKGASAQWDVLHCHFEYHAKLIARFKEASRVAVQHMWRSQTNERGSPLSKFEREALIERHCELFGTWPD*
Ga0062589_1014308051	3300004156	Soil	PSAAQWDVLDCHFEYHARLVARFKEAGHVAVRQMWRTQINEGGAALTQFEREALIERHCELFGA*
Ga0062595_1012273571	3300004479	Soil	MWGTRVNTTIAAQWAALNEHFAHHAMAVDRFRHAGRDLVRRMWQTQANEDGCPLSQFEREALIERHCELFGTWPE*
Ga0062595_1012477062	3300004479	Soil	VETSLAAHWAALDEHFLHHAKLVDRFRDAGGESVLRMWISEINEHGECLSQFERDALIERHCELFGTWPD*
Ga0066395_103431221	3300004633	Tropical Forest Soil	MQGFVLGAHGGPPGGRWNSLVMRRSLAAEWAALGGHFEQHAKLVDRFRGADRDAVVRMWRSQTNEGGNHLSEFEREALIERHCELFGTWPD*
Ga0066395_106707382	3300004633	Tropical Forest Soil	VKKSLAVPWAALDRHFRHQAKIINRFRHADPDAVLRMWTTKRNEHGIPLSQFERDALIERHCELFGTWPN*
Ga0062594_1032431892	3300005093	Soil	MTVRYRRERASQRGGIDAMNGPSAAQWDVLDCHFEYHARLVARFKEAGHVAVRQMWRTQINEGGAALTQFEREALIERHCELFGA*
Ga0066388_1001989973	3300005332	Tropical Forest Soil	VKTSLSAHWAALDNHFRHHATLVDRFRHAGPDAVVRMWKSQMNERGNRLSQCERDALIERHCELFGTWPD*
Ga0066388_1006138442	3300005332	Tropical Forest Soil	VKSSLAAEWAALDLHFQEHFKLVNRFRGAGGDAVIRMWRSQTKENGESLSKTDRDALIERHCELFGTWPI*
Ga0066388_1006665662	3300005332	Tropical Forest Soil	MKASSVAAHWAALDVHFQRQARVVDFRHADAYVVARMWKTQTNEDGRRLSQFERDALIERHCELFGTWPN*
Ga0066388_1010438361	3300005332	Tropical Forest Soil	VRRSVAVHWAALDGHFMQHAKLVERFREAGRNAVRRMWVSQTNEDGKRLSQFERDALIERHCELFGTWPN*
Ga0066388_1016960161	3300005332	Tropical Forest Soil	VGLARRRESFKHGDTLAAHWAALNTHFQHHARMVDRFKEAGREAVLSMWRSQTNEDGQRLSRFEREALIERHCELFG
Ga0066388_1024827262	3300005332	Tropical Forest Soil	MKTSIATHWAALDQHFAYHGKVVDRFRHIDHQAVLRMWKSQTNEGGERLSQFERDALIERYCELFGTWPD*
Ga0066388_1037996981	3300005332	Tropical Forest Soil	AYRETGIVVVKSSLAAEWTALDLHFKEHIKLVNRFRGAGGDAVIRMWRSQTKENGESLSKTDRDALIERHCELFGTWPD*
Ga0066388_1038259041	3300005332	Tropical Forest Soil	RSLAAQWAVLDDHFGHHATLVARFRYADAEAVLRMWLSEINEHGDCLSQFERDALIERHCELFGTQPD*
Ga0066388_1040777702	3300005332	Tropical Forest Soil	AAQWAALEEHFQNHVKLVERFRDAGPELVARMWKSQTNEGGHRLSQFERDALIERHCELFGSWPDLPGAQ*
Ga0066388_1060314962	3300005332	Tropical Forest Soil	MKASVAGHWAALDDHFQHHVRLVDRFSDADAEALVRMWLSEINEHGDCLSQFEREALVERYCELFETWPQ*
Ga0066388_1067117001	3300005332	Tropical Forest Soil	VKSSLAAEWAALDLHFNEHVKLVNRFRGAGRDAVIRMWRSQTKENGECLSKTDRDALIERHCELFGTWPV*
Ga0070677_106286761	3300005333	Miscanthus Rhizosphere	MNGPSAAQWDVLDCHFEYHARLVARFKEAGHVAVRQMWRTQINEGGAALTQFEREALIERHCELFG
Ga0068868_1020637341	3300005338	Miscanthus Rhizosphere	MKGASAQWDVLHCHFEYHAKLIARFKEASRVAVQHMLRSQTNERGSPRSKFEREALIERHCELFGTWPD*
Ga0070662_1016355871	3300005457	Corn Rhizosphere	MKGSYAQWDVLHCHFEYHAKLIARFKEASRVAVQHMWRSQTNERGSPLSKFEREALIERHCELFGTWPD*
Ga0070704_1014055461	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKGASAQWVVLHCHFEYHAKLIARFKEASRVAVQHMLRSQTNERGSPLSKFEREALIERHCELFGTWPD*
Ga0066905_1003085772	3300005713	Tropical Forest Soil	MKTSIAAHWAELDQHFAYHAMVVDRFRHIDHQAVLRMWKSQTNEAGKRLSQIERDALIERHCELFGTWPD*
Ga0066905_1011987101	3300005713	Tropical Forest Soil	WNVVVKMSLAAEWTALDLHFKEHFKLVNRFRGAGGDAVIRMWRSQTKEDGESLSKTERDALIERHCELFGTWPD*
Ga0066903_1000220512	3300005764	Tropical Forest Soil	VKKSLAAQWAALDNHFRQHAKLIDRFRYADADAVARMWKSQTNEDGKRLSPFERDALIERHCELFGTWPH*
Ga0066903_1002130223	3300005764	Tropical Forest Soil	VKASVAGQWAVLDEHFRHHATLITLFRHATPEAVLRMWKTQRNEHGKCLSPFERDALIERHCELFGTWPD*
Ga0066903_1002990183	3300005764	Tropical Forest Soil	VKASIAAQWAVLDDHFRHHATLLGRFKHASPDAIVRMWKTQTNEHGKRLSHFERDALIERHCELFGTWPD*
Ga0066903_1008041992	3300005764	Tropical Forest Soil	MKASVAGHWAALDDHFQHHVRLVDRFSDADAEAVVRMWLSEINEHGDCLSQFEREALVERYCELFETWPQ*
Ga0066903_1011166591	3300005764	Tropical Forest Soil	QRPPREFAVVKRSVSAQWAALDDHFRHHAKLVNRFRHADAHTVARMWKSQTNEDGKRLSQFERHALIERHCELFGTWPD*
Ga0066903_1014039402	3300005764	Tropical Forest Soil	MNISVAAQWAALDDHFREHAKQIQRFRHMGRTAVRQMWNSQTNEDGNRLSQHERDALIERHCELFGTWPM*
Ga0066903_1016090821	3300005764	Tropical Forest Soil	VKASVTAQWAALDHHFRQEAKVVDYFRHTGADTVVWMWKTQTNEDGKRLSQFERDALIERHCELFGTWPN*
Ga0066903_1017857083	3300005764	Tropical Forest Soil	MKKSLAAHWAALDRHFGQHAEIIDRFRRAGPDAVLRMWNTQRNEHGSQLSQFERDALIERHCELFGTWPN*
Ga0066903_1030685922	3300005764	Tropical Forest Soil	MKTSIATHWAALDQHFAYHGKVVDRFRHIDRQAVLRMWKSQTNEGGERLSQFERDALIERYCELFGTWPD*
Ga0066903_1042439322	3300005764	Tropical Forest Soil	MKLPVAAHWAALDDHFQRHVRVVERFRHAKADAVTRMWKYQINEHGVRLSQFERDALIERHCELFGIWPT*
Ga0066903_1044627812	3300005764	Tropical Forest Soil	LDLHFKEHFKLVNRFRGAGGDAVIRMWRSQTKEDGESLSKTERDALIERHCELFGTWPD*
Ga0066903_1066115141	3300005764	Tropical Forest Soil	QRPPREFAVVKRSVSAQWAALDDHFRHHAKLVNRFRHADAYTVARMWKSQTNEDGELLSQFERDALIERHCELFGTWPD*
Ga0066903_1070430602	3300005764	Tropical Forest Soil	MKTSIAAHWATLDQHFAYHANLVDRFRHIDHQAVLRMWKSQTNEDGKRLSQFERDALIERHCELFGTWPD*
Ga0066903_1079605331	3300005764	Tropical Forest Soil	DLHFKEHFKLVNRFRESSGDAVVRMWRSQTKEDGERLSKTERDALIERHCELFGTWPA*
Ga0079222_112801841	3300006755	Agricultural Soil	MEASVAAQWAALEEHFREQAKQVERFQRADHIAVQRMWNCQTDELGNHLSEFERDALIERHCELFGTWPH*
Ga0079221_107687771	3300006804	Agricultural Soil	MKLSVAAQWAALDDHFRQHAKALDRFRHARADAIARMWKYQINEDGEALSKFERDALIERHCELFGSWPD*
Ga0079220_109107212	3300006806	Agricultural Soil	MKTSIAAHWAALDQHFAYHAMVVDRFSHVDHEAVLRMWKNQTNEDGKRLSQFERDALIERHCELFGTWPD*
Ga0075425_10000750711	3300006854	Populus Rhizosphere	VEFTRMQRSLAAEWAALAGHFEHHAKQVDRFRSADRDAVVCMWRSQTNECGNRLSEFEREALIERHCELFGTWPD*
Ga0075434_1023043981	3300006871	Populus Rhizosphere	MWGTRVNTTIAAQWASLNEHFARHAMAVRRFRHAGPDLARRMWQTQTNEDGRPLSQFEREALIERHCELFGTWPE*
Ga0075424_1027306201	3300006904	Populus Rhizosphere	KGASAQWDVLHCHFEYHAKLIARFKEASRVAVQHMWRSQTNERGSPLSKFEREALIERHCELFGTWPD*
Ga0079219_100231442	3300006954	Agricultural Soil	MKTSIAAHWAALDQHFAYHAMVVDRFSHVDHEAVLRMWKNQPNEDGKRLSQFERVALIERHCELFGTWPD*
Ga0079219_106705722	3300006954	Agricultural Soil	MQRSLAAEWAALAGHFEHHAKQVDRFRSADRDAVVCMWRSQTNECGNRLSEFEREALIER
Ga0105245_109795671	3300009098	Miscanthus Rhizosphere	RGGIDAMNGPSAAQWDVLDCHFEYHARLVARFKEAGHIAVRQMWRTQINEGGAALTQFEREALIERHCELFGA*
Ga0105243_115037832	3300009148	Miscanthus Rhizosphere	CHFEYHAKLIARFKEASRVAVQHMWRSQTNERGSPLSKFEREALIERHCELFGTWPD*
Ga0105248_101347511	3300009177	Switchgrass Rhizosphere	DTKREGASQRGGIDAMKGLSAAHWDILDRHFEYHARLVARFKEAGHVAVRQMWRTQINEGGAALTQFEREALIERHCELFGA*
Ga0126374_100456162	3300009792	Tropical Forest Soil	MKTSIAAHWATLDQHFAYHANLVDRFRHIDHQAVLRMWKSQTNEDGKRLSQFERDALVERHCELFGTWPD*
Ga0126380_100984062	3300010043	Tropical Forest Soil	MKSSIAAHWAALDQHFAYHAMVVDRFKHIDHEAVLRMWKSQNNEDGKRLSQFERDALIERYCELFGTWPD*
Ga0126380_105245501	3300010043	Tropical Forest Soil	MRPHTIRQRAYRDTGIVAVKSSLAAEWAALDLHFQEHFKLVNRFRGAGGDAVIRMWRSQTKENGESLSKTDRDALIERHCELFGTWPI*
Ga0126380_118310411	3300010043	Tropical Forest Soil	MQRSLAAEWAALDGHFEHHANLVGRFRGADRDAVARMWRSQTNERGNRLSEFEREALIERYCELFGTWPD*
Ga0126380_120828271	3300010043	Tropical Forest Soil	MLPFWYLGAASSGRIRAVKASVTAQWAALDHHFRREAKVVDYFRHTGADTVVWMWKTQTNEDGKRLSQFERDALIERHCELFGTWPN*
Ga0126384_100984022	3300010046	Tropical Forest Soil	VKTSLAAQWAVLDDHFRHHAKLVARFRHASPDAVVRMWKSQSNEHGDRLSPCERDALIERHCELFGTWPD*
Ga0126384_101708422	3300010046	Tropical Forest Soil	MKTSIAAHWAALDQHFAYHAMVVDRFRHIDHQAVLRMWKSQTNEAGKRLSQFERDALIERHCELFGTWPD*
Ga0126384_101999821	3300010046	Tropical Forest Soil	VKKSLAAQWAALDNHFRRHAKLIDRFRYADADAVARMWKSQTNEDGKRLSPFERDALIERHCELFGTWPH*
Ga0126384_106612781	3300010046	Tropical Forest Soil	VKRSVSAQWAALDDHFRHHAKLVNRFRHADAHTVARMWKSQTNEDGKRLSQFERHALIERHCELFGTWPD*
Ga0126382_104149972	3300010047	Tropical Forest Soil	AALDQHFAYHAMVVDRFKHIDHEAVLRMWKSQNNEDGKRLSQFERDALIERYCELFGTWPD*
Ga0126382_108483891	3300010047	Tropical Forest Soil	VEFTVMQRSLAAEWAALDGHFEHHVRLVDRFRRAGRDAVVRMWASQTNENGNRLSEFERHALIERHCELFGTWPD*
Ga0126370_101478392	3300010358	Tropical Forest Soil	MKTSIAAHWATLDQHFDHHANLVDRFRYIDRQAVLRMWKSQTNEDGKRLSQFERDALVERHCELFGTWPD*
Ga0126370_124345801	3300010358	Tropical Forest Soil	NEGRELAVVRRSVAVHWAALDGHFMQHAKLVERFREAGRNAVRRMWVSQTNEDGKRLSQFERDALIERHCELFGTWPN*
Ga0126376_109640361	3300010359	Tropical Forest Soil	VKRSVSAQWAALDDHFRHHAKLVNRFRHADAHTVARMWKSQTNEDGKRLSQFERHALIERHCELFGTW
Ga0126376_117458281	3300010359	Tropical Forest Soil	MLPFWYLGAASSGRIRAVKASVTAQWAALDHHFRREAKVVDYFRHTGADTVVWMWKIQTNEDGKRLSQFERDALIERHYELFGTWPN*
Ga0126376_119071481	3300010359	Tropical Forest Soil	MKLLVAAQWAALDDHFREQTKLIGRFRHARADAVRRMWRRQINEEGARLSQFERDALIERHCELFGTWPN*
Ga0126376_121862511	3300010359	Tropical Forest Soil	VKKSVAAQWAVLDDHFLRHTKLVDRFRHAGAEAVVRMWLSDINEHGERLSRFERDALIERHCELFGTWPD*
Ga0126378_100354285	3300010361	Tropical Forest Soil	VKRSVSAQWAALDDHFRHHAKLVNRFRHADAHTVARMWKSQTNEDGKLLSQFERDALIERHCELFGTWPD*
Ga0126378_105553452	3300010361	Tropical Forest Soil	MRTSLAAQWEVLDDHFRRHATLVNRFRHAGPNAVVHMWKSQSNEHGDRLSQYERDALVESHCELFGTWPD*
Ga0126377_114600001	3300010362	Tropical Forest Soil	SAQWAALDDHFRHHAKLVNRFRHADAYTVARMWKSQTNEDGELLSQFERDALIERHCELFGTWPD*
Ga0126377_122791262	3300010362	Tropical Forest Soil	VKSTVGAQWTALDDHFRREATVVDHFRRASADAVARMWKTQTNEDGERLSQFERDALIERHCELFGTWPN*
Ga0126377_128127851	3300010362	Tropical Forest Soil	VHSTVWPGSSRRIRAVKPSVAAEWAALDDHFRQHAKVVARFRYVGPDAVLRMWESQANEEGICLSKLERDALIERHCELFGIWPK*
Ga0126379_109477181	3300010366	Tropical Forest Soil	VKASVTAQWAALDDHFRREAKVVDYFRHTGADTVVWMWKTQTNEDGKRLSQFERDALIERHCELFGTWPN*
Ga0134124_100933813	3300010397	Terrestrial Soil	MTVRYRRERASQRGGIDVMKGPSAAQWDVLDCHFEYHARLVARFKDAGHVAVEQMWRTQTNERGAPLSQFEREALIERHCELFGTWPD
Ga0126383_100268596	3300010398	Tropical Forest Soil	VRTSLAAQWEVLDDHFRRHATLVNRFRHAGPNAVVHMWKSQSNEHGDRLSRYECDALVERHCELFGTWAD*
Ga0126383_102573722	3300010398	Tropical Forest Soil	VKRSVSAQWAALDDHFRHHAKLVNRFRHADAYTVARMWKSQTNEDGELLSQFERDALIERHCELFGTWPD*
Ga0126383_103059171	3300010398	Tropical Forest Soil	EFAVVKRSVSAQWAALDDHFRHHAKLVNRFRHADAHTVARMWKSQTNEDGKRLSQFERHALIERHCELFGTWPD*
Ga0126383_106055592	3300010398	Tropical Forest Soil	LVKKPLAAHWVALDNHFRRHAKLVERFRHASAGAVARMWKSQTNEDGKRLSQFERDALIERYCELFGTWPD*
Ga0126383_108600781	3300010398	Tropical Forest Soil	MQRSLAAEWAALDGHFEHHAKLVGRFMGADHDAVVRMWRGQTNECGNRLSEFEREALIERYCELFGTWPD*
Ga0126383_109490821	3300010398	Tropical Forest Soil	CYCSVWYLGAASSGRIRAVKASVTAQWAALDHHFRREAKVVDYFRHTGADTVVWMWKIQTNEDGKRLSQFERDALIERHYELFGTWPN*
Ga0126383_114200461	3300010398	Tropical Forest Soil	VKASVAAHWAALDDHFRGHARLVDRFRHADAHAVARMWKTQTNEAGKRLSQFERDALIERHCELFGTWPN*
Ga0126383_122746741	3300010398	Tropical Forest Soil	MKLSVAAQWAALDDHFQRHAELIGRFRHAGPDAVVRMWKNQRNEHGYQLSPCERDALIERHCELFGTWPD*
Ga0134123_101328012	3300010403	Terrestrial Soil	MKGLSAAHWDILDRHFEYHARLVARFKEAGHVAVRQMWRTQINEGGAALTQFEREALIER
Ga0134123_104414161	3300010403	Terrestrial Soil	AQWDVLHCHFEYHAKLIARFKEASRVAVQHMLRSQTNERGSPLSKFEREALIERHCELFGTWPD*
Ga0134123_109975072	3300010403	Terrestrial Soil	VKRSPTAQWDVLDSHFEYHARLVARFREASDEAVLHMWRTQTNERRTPLSQFERDALIERHCELFGVW
Ga0124844_11222781	3300010868	Tropical Forest Soil	VEFTVMQRSLAAEWAALDGHFEHHVRLVDRFRRAGRDAVVRMWTSQTNENGNRLSEFERHALIERHCELFGTWPD*
Ga0164302_114917132	3300012961	Soil	AQWAALNEHFAHHAMAVDRFRHAGRDLVRRMWQTQANEDGWPLSQFEREALIERHCELFGTWPE*
Ga0126369_109070481	3300012971	Tropical Forest Soil	VKKSLAAQWAALDNHFRQHAKLIDRFRYADADAVARMWKSQTNEDGKRLSRFERDALIERYCELFGRWPD*
Ga0126369_119713892	3300012971	Tropical Forest Soil	MQQKLPAGGIHTVKASVAGQWAVLDEHFRHHATLITLFRHATPEAVLRMWKTQRNEHGKCLSPFERDALIERHCELFGTWPD*
Ga0126369_136324721	3300012971	Tropical Forest Soil	MKTSISAHWAALDQHFAYHAMVVDRFRHIDHQAVLRMWKSQTNEAGKRLSQFERDALIERHCELFGTWPD*
Ga0157380_101345924	3300014326	Switchgrass Rhizosphere	VKRSPTAQWDVLDSHFEYHARLVARFREASDEAVLHMWRTQTNERRTPLSQFERDALIERHCELFGVWSVAT*
Ga0132258_100284265	3300015371	Arabidopsis Rhizosphere	MKSSIADHWAALDQHFAYHAMIVDRFRHTDQEAVRRMWKSQTNEDGKRLSQFERDALIERYCELFGTWPD*
Ga0132258_100487212	3300015371	Arabidopsis Rhizosphere	MKLSVAAQWAALDDHFRQHAKALDRFRHARADAIARMWKYQINEDGEALLKFEREALIERHCELFGSWPD*
Ga0132258_102079092	3300015371	Arabidopsis Rhizosphere	MQRSLAAEWAALAGHFEHHAKLVDRFRGADHDAVVRMWRNQTNEGGNRLTEFEREALIERYCELFGTWPE*
Ga0132258_119910043	3300015371	Arabidopsis Rhizosphere	MKGPSAAQWDVLDCHFEYHARLVARFKDAGHVAVEQMWRTQTNERGAPLSQFEREALIERHCELFGTWPD*
Ga0132256_1010039271	3300015372	Arabidopsis Rhizosphere	MKGLSAAHWDILDRHFEYHARLVARFKDAGHVAVEQMWRTQTNERGAPLSQFEREALIERHCELFGTWPD*
Ga0132257_1006222741	3300015373	Arabidopsis Rhizosphere	RGGIDAMKGASAQWDVLHCHFEYHAKLIARFKEASRVAVQHMWRSQTNERGSPLSKFEREALIERHCELFGTWPD*
Ga0182036_104999711	3300016270	Soil	MQRSLAAEWAALDGHFEHHAKLVDRFREADRVAVVRMWRSQTNEYGIRLSQFEREAL
Ga0182041_102262421	3300016294	Soil	MSLAAEWATLDLHFKEHFKLVNRFRGAGGDAVIHMWRSQTKEDGKRLSKTERDALIERHCEIFGTWPD
Ga0182033_1000535310	3300016319	Soil	MKTSIAAHWAALHQHFAYHAMVVDRFRHIDHEAVLRMWKSQTNEDGNRLSQFERDALIERHCELFGTWPD
Ga0182034_116154051	3300016371	Soil	MSLAAEWATLDLHFKEHFKLVNRFRRAGGDAVIRMWRSQTKEDGERLSKTERDALIERHCEIFGTWPD
Ga0182039_101473266	3300016422	Soil	MSAIRITPFCAKLSPFQRPPGGLRAVKASVAAHWAALDDHFRYHATLVDRFRHADAHAVARMWASQRNEAGERLSQFERDSLIERHCELFGTWPN
Ga0182038_118596341	3300016445	Soil	MKLSVAAQWAALDDHFQQQAKQIQRFRRARSDAVARMWKHQTNEDGVCLSQFERDALI
Ga0163161_115650762	3300017792	Switchgrass Rhizosphere	GIDAMKGASAQWDVLHCHFEYHAKLIARFKEASRVAVQHMLRSQTNERGSPLSKFEREALIERHCELFGTWPD
Ga0187779_108294691	3300017959	Tropical Peatland	LRASLSARWAALDVHFRRHAEAVNHFRFAGPGAVVRMWKNQATEDGKRLSQFEREALIERHCELFGTWPT
Ga0187777_112618121	3300017974	Tropical Peatland	VGLHAMNMSVAAQWAALDDHFRQHAQQVERFRQAGPDAVRRMWKHQTNEIGQRLSQCERDALIERHCELF
Ga0187777_113476101	3300017974	Tropical Peatland	ETGIVVVKMSLAAEWTALDLHFKKHFRLVNRFRGAGGDAVVRMWRSQTKEDGKRLTKTERDALIERHCELFGTWPD
Ga0187846_103194512	3300021476	Biofilm	VKGAVAAQWAALDAHFQEHVNAVDRFRYADAEAVLRMWLSGINEHGECLSQFERDALIERHCELFGTWPD
Ga0207710_101749002	3300025900	Switchgrass Rhizosphere	MKGSYAQWDVLHCHFEYHAKLIARFKEASRVAVQHMWRSQTNERGSPLSKFEREALIERHCELFGTWPD
Ga0207699_103439151	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MQRSLAAEWAALAGHFEHHAKLVDRFRSADRDAVVCMWRSQTNECGNRLSEFEREALIERHCELFGTWPD
Ga0207650_117637931	3300025925	Switchgrass Rhizosphere	MNGPSAAQWDVLDCHFEYHARLVARFKEAGHVAVRQMWRTQINEGGAALTQFEREALIERHCELFGA
Ga0207687_105423972	3300025927	Miscanthus Rhizosphere	MNGPSAAQWDVLDCHFEYHARLVARFKEAGHIAVRQMWRTQINEGGAALTQFEREALIERHCELFGA
Ga0207686_113207502	3300025934	Miscanthus Rhizosphere	MTVRYQVREGGLAEGGIDAMKRSPAAQWGVLDCHFEYHARLVARFRDAGHEAVQRMWRTQSNERGARLSQFERDALIERHCELFGAWPV
Ga0207711_101662502	3300025941	Switchgrass Rhizosphere	MTVRYRRERASQRGGIDAMNGPSAAQWDVLDCHFEYHARLVARFKEAGHVAVRQMWRTQINEGGAALTQFEREALIERHCELFGA
Ga0207677_112976101	3300026023	Miscanthus Rhizosphere	MKGSYAQWDVLHCHFEYHAKLIARFKEASRVAVQHMLRSQTNERGSPRSKFEREALIERHCELFGTWPD
Ga0209465_101783052	3300027874	Tropical Forest Soil	VKKSLAVPWAALDRHFRHQAKIINRFRHADPDAVLRMWTTKRNEHGIPLSQFERDALIERHCELFGTWPN
Ga0209465_102427852	3300027874	Tropical Forest Soil	MQGFVLGAHGGPPGGRWNSLVMRRSLAAEWAALGGHFEQHAKLVDRFRGADRDAVVRMWRSQTNEGGNHLSEFEREALIERHCELFGTWPD
Ga0268266_102642342	3300028379	Switchgrass Rhizosphere	LHCHFEYHAKLIARFKEASRVAVQHMWRSQTNERGSPLSKFEREALIERHCELFGTWPD
Ga0318541_108112402	3300031545	Soil	AAVHQHFAYHAMVVDRFRHIDHEAVLRMWKSQTNEDGNRLSQFERDALIERHCELFGTWP
Ga0306917_106879231	3300031719	Soil	MKTSIAAHWAALRQHFAYHAMVVDRFRHIDHEAVLRMWKSQTNEDGNRLSQFERDALIERHCELFGTWPD
Ga0306917_113160522	3300031719	Soil	GPPGGRWNSLAMQRSLAAEWAALDGHFEHHAKLVDRFREADRVAVVRMWRSQTNECGIRLSQFEREALIERHCELFGTWPD
Ga0318492_107509291	3300031748	Soil	VKASVAAHWAALDDHFRRHAKVVDRFRHADAREVARMWASQRNEAGERLSQFERDSLIERHCELFGTWPN
Ga0318550_106431941	3300031797	Soil	MSLAAEWATLDLHFKEHFKLVNRFRGAGGDAVIRMWRSQTKEDGERLSKTERDALIERHCEIFGTWPD
Ga0318511_103269251	3300031845	Soil	VKMSLAAEWATLDLHFKEHFKLVNRFRRAGGDAVIHMWRSQTKEDGKRLSKTERDALIERHCEIFGTWPD
Ga0306925_103258562	3300031890	Soil	VKMSLAAEWATLDLHFKEHFKLVNRFRGAGGDAVIRMWRSQTKEDGERLSKTERDALIERHCEIFGTWPD
Ga0306923_110556301	3300031910	Soil	HWAALRQHFAYHAMVVDRFRHIDHEAVLRMWKSQTNEDGNRLSQFERDALIERHCELFGTWPD
Ga0306921_120663631	3300031912	Soil	LAQDWRETGNVVVKMSLAAEWATLDLHFKEHFKLVNRFRRAGGDAVIHMWRSQTKEDGKRLSKTERDALIERHCEIFGTWPD
Ga0310916_114214551	3300031942	Soil	ARLAQDWRETGNVVVKMSLAAEWATLDLHFKEHFKLVNRFRRAGGDAVIRMWRSQTKEDGKRLSKTERDALIERHCEIFGTWPD
Ga0310913_110545991	3300031945	Soil	MKTSIAAHWAALRQHFAYHAMVVDRFRHIDHEAVLRMWKSQTNEDGNRLSQFERDALIERHC
Ga0310910_115352721	3300031946	Soil	FTLVKKPLAAHWVALDNHFRQHAKLVERFRHASAGAVARMWKSQTNEDGKRLSQFERDALIERYCELFGTWPD
Ga0306926_101955302	3300031954	Soil	VKKPLAAHWVALDNHFRQHAKLVERFRHASAGAVARMWKSQTNEDGKRLSQFERDALIERYCELFGTWPD
Ga0306922_101411242	3300032001	Soil	MQRSLAAEWAALDGHFEHHAKLVDRFREADRVAVVRMWRSQTNEYGIRLSQFEREALIERHCELFGTWPD
Ga0318577_105344251	3300032091	Soil	MQRSLAAEWAALDGHFEHHAKLVDRFRGADRVAVARMWRSQTNECGNRLSQFEREALIERHCELFGTWPD
Ga0306920_1012472931	3300032261	Soil	VKGSVAAQWTALDRHFRHHADAHAVARMWKSQTNEDGKRLSQFERDALIERHCELFGIWPDQRRTLSRLSHHKCARQER
Ga0306920_1038151971	3300032261	Soil	MKLSLAAHWAALDDHFQRHAKLVDRFRHAKSDAVARMWKYQINEDGLRLSPFERDALIERHCELFGTWPT
Ga0306920_1038202321	3300032261	Soil	GHFRHHATVVDRFRNSDRDAVVRMWKSQTNEYGKCLSRFERDALIERHSELFGTWPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F057264

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences