NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F057262

Metagenome / Metatranscriptome Family F057262

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F057262
Family Type Metagenome / Metatranscriptome
Number of Sequences 136
Average Sequence Length 64 residues
Representative Sequence VKTFWWVLAGLAVLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Number of Associated Samples 108
Number of Associated Scaffolds 136

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 66.91 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 72.06 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.971 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(17.647 % of family members)
Environment Ontology (ENVO) Unclassified
(35.294 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.147 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 25.00%    β-sheet: 19.57%    Coil/Unstructured: 55.43%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 136 Family Scaffolds
PF09391DUF2000 12.50
PF00072Response_reg 3.68
PF00581Rhodanese 2.94
PF00248Aldo_ket_red 2.94
PF12833HTH_18 2.21
PF09900DUF2127 2.21
PF00106adh_short 1.47
PF09335SNARE_assoc 1.47
PF01355HIPIP 1.47
PF13419HAD_2 0.74
PF00165HTH_AraC 0.74
PF02518HATPase_c 0.74
PF00529CusB_dom_1 0.74
PF03243MerB 0.74
PF07080DUF1348 0.74
PF07485DUF1529 0.74
PF06912DUF1275 0.74
PF04542Sigma70_r2 0.74
PF13493DUF4118 0.74
PF13561adh_short_C2 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 136 Family Scaffolds
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 1.47
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 1.47
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 1.47
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.74
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.74
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.74
COG3558Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamilyFunction unknown [S] 0.74
COG3619Uncharacterized membrane protein YoaK, UPF0700 familyFunction unknown [S] 0.74
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.97 %
UnclassifiedrootN/A11.03 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2067725004|GPKC_F5V46DG04H2V67Not Available514Open in IMG/M
2088090014|GPIPI_17245412All Organisms → cellular organisms → Bacteria5024Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c2060642All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300000443|F12B_12045803All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300002914|JGI25617J43924_10109901All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa979Open in IMG/M
3300004114|Ga0062593_102683995All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300004156|Ga0062589_100773918All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300004463|Ga0063356_100024508All Organisms → cellular organisms → Bacteria5711Open in IMG/M
3300005294|Ga0065705_10347251All Organisms → cellular organisms → Bacteria → Proteobacteria962Open in IMG/M
3300005343|Ga0070687_100018689All Organisms → cellular organisms → Bacteria3211Open in IMG/M
3300005356|Ga0070674_101126839All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300005365|Ga0070688_101066937Not Available644Open in IMG/M
3300005406|Ga0070703_10053327All Organisms → cellular organisms → Bacteria1300Open in IMG/M
3300005434|Ga0070709_10015933All Organisms → cellular organisms → Bacteria → Proteobacteria4281Open in IMG/M
3300005440|Ga0070705_100040735All Organisms → cellular organisms → Bacteria → Proteobacteria2644Open in IMG/M
3300005444|Ga0070694_101085997All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300005444|Ga0070694_101431921All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300005445|Ga0070708_100584024All Organisms → cellular organisms → Bacteria1053Open in IMG/M
3300005445|Ga0070708_101431175Not Available644Open in IMG/M
3300005458|Ga0070681_11472224Not Available605Open in IMG/M
3300005467|Ga0070706_100031197All Organisms → cellular organisms → Bacteria → Proteobacteria4915Open in IMG/M
3300005467|Ga0070706_101375316Not Available646Open in IMG/M
3300005471|Ga0070698_100110965All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2707Open in IMG/M
3300005471|Ga0070698_100179391All Organisms → cellular organisms → Bacteria → Proteobacteria2056Open in IMG/M
3300005471|Ga0070698_100341059All Organisms → cellular organisms → Bacteria1430Open in IMG/M
3300005529|Ga0070741_10013174All Organisms → cellular organisms → Bacteria14692Open in IMG/M
3300005536|Ga0070697_100069950All Organisms → cellular organisms → Bacteria2876Open in IMG/M
3300005549|Ga0070704_100031094All Organisms → cellular organisms → Bacteria → Proteobacteria3586Open in IMG/M
3300005549|Ga0070704_100207674All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1585Open in IMG/M
3300005842|Ga0068858_100235603All Organisms → cellular organisms → Bacteria1736Open in IMG/M
3300005843|Ga0068860_100315441All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1534Open in IMG/M
3300005878|Ga0075297_1029841All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300006755|Ga0079222_11485108All Organisms → cellular organisms → Bacteria → Proteobacteria634Open in IMG/M
3300006852|Ga0075433_10476637All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300006852|Ga0075433_10880060All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300006854|Ga0075425_100274809All Organisms → cellular organisms → Bacteria1939Open in IMG/M
3300006854|Ga0075425_100449299All Organisms → cellular organisms → Bacteria1484Open in IMG/M
3300006854|Ga0075425_100466308All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300006871|Ga0075434_100271869All Organisms → cellular organisms → Bacteria1714Open in IMG/M
3300007255|Ga0099791_10407639All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300009038|Ga0099829_10012041All Organisms → cellular organisms → Bacteria5656Open in IMG/M
3300009038|Ga0099829_10315005All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300009038|Ga0099829_10801855All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300009090|Ga0099827_10892101All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium770Open in IMG/M
3300009147|Ga0114129_10009471All Organisms → cellular organisms → Bacteria13882Open in IMG/M
3300010362|Ga0126377_10321691Not Available1533Open in IMG/M
3300010399|Ga0134127_10221751All Organisms → cellular organisms → Bacteria → Proteobacteria1772Open in IMG/M
3300010400|Ga0134122_12721699Not Available547Open in IMG/M
3300010401|Ga0134121_11206405All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300011269|Ga0137392_10006387All Organisms → cellular organisms → Bacteria7536Open in IMG/M
3300011269|Ga0137392_10366842All Organisms → cellular organisms → Bacteria1194Open in IMG/M
3300011270|Ga0137391_10009648All Organisms → cellular organisms → Bacteria7657Open in IMG/M
3300012096|Ga0137389_10118425All Organisms → cellular organisms → Bacteria2130Open in IMG/M
3300012202|Ga0137363_10102447All Organisms → cellular organisms → Bacteria2178Open in IMG/M
3300012205|Ga0137362_10704563All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300012362|Ga0137361_10351195All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300012685|Ga0137397_10023701All Organisms → cellular organisms → Bacteria4334Open in IMG/M
3300012685|Ga0137397_10028360All Organisms → cellular organisms → Bacteria → Proteobacteria3973Open in IMG/M
3300012685|Ga0137397_10215695All Organisms → cellular organisms → Bacteria1428Open in IMG/M
3300012917|Ga0137395_11049162All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300012918|Ga0137396_10540380All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300012922|Ga0137394_10035474All Organisms → cellular organisms → Bacteria4074Open in IMG/M
3300012930|Ga0137407_10168637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1947Open in IMG/M
3300014325|Ga0163163_10237436All Organisms → cellular organisms → Bacteria1872Open in IMG/M
3300014497|Ga0182008_10753810Not Available561Open in IMG/M
3300014745|Ga0157377_10529223All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300015052|Ga0137411_1284483All Organisms → cellular organisms → Bacteria → Proteobacteria626Open in IMG/M
3300015241|Ga0137418_10606754All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300017997|Ga0184610_1129701Not Available817Open in IMG/M
3300018000|Ga0184604_10270030All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300018028|Ga0184608_10199859All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300018053|Ga0184626_10000280All Organisms → cellular organisms → Bacteria14792Open in IMG/M
3300018066|Ga0184617_1079815All Organisms → cellular organisms → Bacteria → Proteobacteria885Open in IMG/M
3300018071|Ga0184618_10180090All Organisms → cellular organisms → Bacteria → Proteobacteria876Open in IMG/M
3300018071|Ga0184618_10397962All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300018422|Ga0190265_10672090All Organisms → cellular organisms → Bacteria1157Open in IMG/M
3300018422|Ga0190265_10897088All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300018429|Ga0190272_10935435All Organisms → cellular organisms → Bacteria → Proteobacteria818Open in IMG/M
3300018429|Ga0190272_12550627All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300019789|Ga0137408_1129723All Organisms → cellular organisms → Bacteria1461Open in IMG/M
3300019789|Ga0137408_1197438All Organisms → cellular organisms → Bacteria → Proteobacteria2188Open in IMG/M
3300019878|Ga0193715_1108248All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium549Open in IMG/M
3300019882|Ga0193713_1034812All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300019882|Ga0193713_1157293Not Available606Open in IMG/M
3300019883|Ga0193725_1126893All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium575Open in IMG/M
3300020004|Ga0193755_1014044All Organisms → cellular organisms → Bacteria2636Open in IMG/M
3300020004|Ga0193755_1154358All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales694Open in IMG/M
3300020021|Ga0193726_1163899All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300020070|Ga0206356_10849435All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1549Open in IMG/M
3300020170|Ga0179594_10191149All Organisms → cellular organisms → Bacteria → Proteobacteria765Open in IMG/M
3300021073|Ga0210378_10016959All Organisms → cellular organisms → Bacteria → Proteobacteria2968Open in IMG/M
3300021344|Ga0193719_10082127All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1401Open in IMG/M
3300021344|Ga0193719_10206696All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300021432|Ga0210384_10090397All Organisms → cellular organisms → Bacteria2749Open in IMG/M
3300021432|Ga0210384_11786982All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300021445|Ga0182009_10000066All Organisms → cellular organisms → Bacteria16059Open in IMG/M
3300022534|Ga0224452_1012870All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2226Open in IMG/M
3300025885|Ga0207653_10019448All Organisms → cellular organisms → Bacteria2141Open in IMG/M
3300025910|Ga0207684_10030112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4621Open in IMG/M
3300025910|Ga0207684_10211011All Organisms → cellular organisms → Bacteria1675Open in IMG/M
3300025910|Ga0207684_10699597All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300025915|Ga0207693_10703169Not Available783Open in IMG/M
3300025917|Ga0207660_10261363All Organisms → cellular organisms → Bacteria → Proteobacteria1369Open in IMG/M
3300025918|Ga0207662_10028862All Organisms → cellular organisms → Bacteria3211Open in IMG/M
3300025931|Ga0207644_10206370All Organisms → cellular organisms → Bacteria1552Open in IMG/M
3300025972|Ga0207668_10284262All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1358Open in IMG/M
3300025972|Ga0207668_11219083All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300026035|Ga0207703_11530827All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300026095|Ga0207676_11969825All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium583Open in IMG/M
3300026285|Ga0209438_1000107All Organisms → cellular organisms → Bacteria21294Open in IMG/M
3300026285|Ga0209438_1061912All Organisms → cellular organisms → Bacteria → Proteobacteria1230Open in IMG/M
3300026304|Ga0209240_1024492All Organisms → cellular organisms → Bacteria2309Open in IMG/M
3300026320|Ga0209131_1006032All Organisms → cellular organisms → Bacteria7798Open in IMG/M
3300026345|Ga0257148_1020442All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300026351|Ga0257170_1054850All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300026361|Ga0257176_1012091All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa1153Open in IMG/M
3300026374|Ga0257146_1001319All Organisms → cellular organisms → Bacteria → Proteobacteria4191Open in IMG/M
3300026489|Ga0257160_1035589Not Available834Open in IMG/M
3300026508|Ga0257161_1066621Not Available735Open in IMG/M
3300027787|Ga0209074_10037690All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300028047|Ga0209526_10406505All Organisms → cellular organisms → Bacteria → Proteobacteria903Open in IMG/M
3300028673|Ga0257175_1042964All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300028716|Ga0307311_10197738All Organisms → cellular organisms → Bacteria → Proteobacteria589Open in IMG/M
3300028791|Ga0307290_10204528All Organisms → cellular organisms → Bacteria → Proteobacteria724Open in IMG/M
3300028819|Ga0307296_10205324All Organisms → cellular organisms → Bacteria → Proteobacteria1070Open in IMG/M
3300028828|Ga0307312_10411529Not Available889Open in IMG/M
3300031720|Ga0307469_10039767All Organisms → cellular organisms → Bacteria2843Open in IMG/M
3300031720|Ga0307469_10075103All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2261Open in IMG/M
3300031740|Ga0307468_101279402All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium666Open in IMG/M
3300031820|Ga0307473_10243842All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300032017|Ga0310899_10538036Not Available578Open in IMG/M
3300032174|Ga0307470_10376260All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium995Open in IMG/M
3300032180|Ga0307471_100100983All Organisms → cellular organisms → Bacteria2618Open in IMG/M
3300032180|Ga0307471_102462628All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300032205|Ga0307472_100018626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3737Open in IMG/M
3300032770|Ga0335085_10744003All Organisms → cellular organisms → Bacteria1085Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.65%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere14.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.62%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.88%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.15%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.15%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.21%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.21%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.47%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.47%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.47%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.74%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.74%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.74%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.74%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.74%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.74%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.74%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.74%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2067725004Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000443Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemlyEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005878Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026345Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-AEnvironmentalOpen in IMG/M
3300026351Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-BEnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026489Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-AEnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPKC_039714102067725004SoilMRKRLPLNPSGRITDVKTFRWVIAGLAMLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGAPVECVCVDGVISTCLDPGP
GPIPI_031028402088090014SoilVKTFWWVLAGLAVLVIVLSVEVMGRTRPSPGCTSSVVIARGSHGETVECVCVDGVLATCFHPGP
ICChiseqgaiiDRAFT_206064223300000033SoilVKTFWWVLAGLAVLVIVLSVEVMGRTRPSPGCTSSVVIARGSHGETVECVCVDGVLATCFHPGP*
F12B_1204580343300000443SoilVVKTFGWILAGLLLLALGLAVHVMGRTRPSRDCTSSVVIARGPHGQPVECVCVDGVIATCFNPGP*
JGI25617J43924_1010990113300002914Grasslands SoilVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIAHGPHGEPIECVCIGGA
Ga0062593_10268399523300004114SoilMKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGTVSTCFEPGP*
Ga0062589_10077391833300004156SoilMKLFWYVLAGLGLLVIALGVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGTVSTCFEPGP*
Ga0063356_10002450843300004463Arabidopsis Thaliana RhizosphereMRKRLPLNPSGRITDVKTFRWVIAGLAMLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGAPVECVCVDRVISTCFDPGP*
Ga0065705_1034725133300005294Switchgrass RhizosphereMLGWVLTGLLLLVVVLAIQVMGRTRSVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP*
Ga0070687_10001868953300005343Switchgrass RhizosphereMKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSSVIIGRGPHGEPVECVCVNGTVSTCFEPGP*
Ga0070674_10112683913300005356Miscanthus RhizosphereMKLFWYVLAGLGLLVIALAVGVEWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGTVSTCFEPGP*
Ga0070688_10106693723300005365Switchgrass RhizosphereMKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCV
Ga0070703_1005332723300005406Corn, Switchgrass And Miscanthus RhizosphereVKIFWCVMAGLVLLGGVLALRVTGRPRPSPDCASSVVIVHGPHGEAVECVCIGGTVSTCFDPGP*
Ga0070709_1001593333300005434Corn, Switchgrass And Miscanthus RhizosphereMKVFWCVMAGLLVLTLLLALRVTGRPRAGADCASSVVIVHGPHGEPVECVCVGGAISTCFAPGP*
Ga0070705_10004073523300005440Corn, Switchgrass And Miscanthus RhizosphereVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP*
Ga0070694_10108599713300005444Corn, Switchgrass And Miscanthus RhizosphereVKTFWWPLAGLVLLAMVLAAFVMARARPTPDCTSSVVMGRGPHGEPVECVCVGGTISTCFGPGP*
Ga0070694_10143192113300005444Corn, Switchgrass And Miscanthus RhizosphereLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP*
Ga0070708_10058402423300005445Corn, Switchgrass And Miscanthus RhizosphereVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIVHRPHGEPIECVCIGGAVSTCFDPGP*
Ga0070708_10143117523300005445Corn, Switchgrass And Miscanthus RhizosphereLEDAVKIFWCVMAGLVLLGGVLALRVTGRPRPSPDCASSVVIVHGPHGEAVECVCIGGTVSTCFDPGP*
Ga0070681_1147222413300005458Corn RhizosphereMRKRLPLNPSGRITDVKTFRWVIAGLAMLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGAPVECVCVDGVISTCLDPGP*
Ga0070706_10003119793300005467Corn, Switchgrass And Miscanthus RhizosphereMKVFWCVMAGLLVLTLLLALRVTGRPRAAADCTSSVVIVHGPHGEPVECVCVGGAISTCFAPGP*
Ga0070706_10137531613300005467Corn, Switchgrass And Miscanthus RhizosphereMAEAPRHLEDAVKIFWCVMAGLVLLGGVLALRVTGRPRPSPDCASSVVIVHGPHGEAVECVCIGGTVSTCFDPGP*
Ga0070698_10011096533300005471Corn, Switchgrass And Miscanthus RhizosphereVKPFWWILTVLVLLVTVLALRVTRTPPSSDCASSVRIVRGPHGEPVECVCVGGTLSTCFDPGP*
Ga0070698_10017939123300005471Corn, Switchgrass And Miscanthus RhizosphereVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVIIVHRPHGEPIECVCIGGAVSTCFDPGP*
Ga0070698_10034105913300005471Corn, Switchgrass And Miscanthus RhizosphereVKTFWWPLAGLVLLAMVLAVYVMARTRPSPDCTSSVVMGRGPHGEPVECICVGGTISTCFGPGP*
Ga0070741_1001317453300005529Surface SoilMKLFWYMLAGLGLLVIALAVGVARRPPPARDCASSVVITRGPHGGPVECVCVNGAISTCFEPGP*
Ga0070697_10006995023300005536Corn, Switchgrass And Miscanthus RhizosphereVKTFWWPLAGLVLLAMVLAVYVMARTRPSPDCTSSVVMGRGPHGEPVECVCVGGTISTCFGPGP*
Ga0070704_10003109423300005549Corn, Switchgrass And Miscanthus RhizosphereMLTWVVTGLVLLAMALAMQVMGRTRSVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP*
Ga0070704_10020767433300005549Corn, Switchgrass And Miscanthus RhizosphereVVKTFGWILAGLLLLALGLAVHVMGRTRPSHDCTSSVVIARGPHGQPVECVCVDGVIATCFNPGP*
Ga0068858_10023560313300005842Switchgrass RhizosphereMKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSTVIIGRGPHAEPVECVCVNGTVSTCF
Ga0068860_10031544123300005843Switchgrass RhizosphereVVKTFGWILAGLLLLALGLAVHVMGRTRPSHDCASSVVIARGPHGQPVECVCVDGVIATCFNPGP*
Ga0075297_102984113300005878Rice Paddy SoilVTRLLWWWLLTGLALVVTVLAVGVTWRPRSSPDCAGRIVIGRGPHGEPIECVCVGGTISTCFEPGP*
Ga0079222_1148510823300006755Agricultural SoilMKLFWYVLTGLALLVVALAVGVARRPAPGRDCTSSVIIGRGPHGQAVECVCVNGTVSTCFEPGP*
Ga0075433_1047663733300006852Populus RhizosphereMKVFWCVMAGLLVLTLLLALRVTGRPRAGADCTSSVIMLHGPHGEPVECVCVAGAISTCFAPGP*
Ga0075433_1088006033300006852Populus RhizosphereVLTLLLALRVTGRPRAAADCTSSVVIVHGPHGEPVECVCVGGAISTCFVPGP*
Ga0075425_10027480913300006854Populus RhizosphereVKTFWWVLAGLAVLVIVLSVQVMGRTRPSPGCTSSVVIARGSHGEPVECVCVDGVLATCFHPGP*
Ga0075425_10044929933300006854Populus RhizosphereMKVFWCVMAGLVVLTLLLALRVTGRPRAAADCTSSVVIVHGPHGEPVECVCVGGAISTCFVPGP*
Ga0075425_10046630813300006854Populus RhizosphereKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSSVIIGRGPHGEPVECVCVNGTVSTCFEPGP*
Ga0075434_10027186913300006871Populus RhizosphereVKTFWWVLAGLAVLVIVLSVQVIGRTRPSPGCTSSVVIARGSHGEPVECVCVEGVLATCFHPGP*
Ga0099791_1040763923300007255Vadose Zone SoilVKILGWVLGGLLLLVMVLAIQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP*
Ga0099829_1001204163300009038Vadose Zone SoilVKTFWWVLAGLAVLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGEPIECVCVEGVISTCFDPGP*
Ga0099829_1031500523300009038Vadose Zone SoilVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIAHGPHGEPIECVCIGGAVSTCFDPGP*
Ga0099829_1080185513300009038Vadose Zone SoilVKLFWWILTGLVLLVVVLSMPVLWRTRSSPDCTSNVVIVRGPHGEPAECVCVGGTIATCFDPGP*
Ga0099827_1089210123300009090Vadose Zone SoilMLAWVVMGLVLLAMALAMQVMGRTRAVPGCTSSVVIGHGPRGEPVECVCVEGVISTCFDPGP*
Ga0114129_10009471203300009147Populus RhizosphereMLGWVLTGLALLVVVLGIQVMGRPRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP*
Ga0126377_1032169143300010362Tropical Forest SoilMKIFWYVLAGLGLLVIALAVGVAWRPAPSRDCASSVVIGRGPHGEAVECVCVNGTVSTCFEPGP*
Ga0134127_1022175153300010399Terrestrial SoilVAPVVAMRKRLPLNPSGRITDVKTFRWVIAGLAMLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGAPVECVCVDGVISTCLDPGP*
Ga0134122_1272169913300010400Terrestrial SoilVKTFWWVLAGLAILVGALAVQVMGRTRPSPGCTSSVVIGRGPHGAPVECVCVDGVISTCFDPGP*
Ga0134121_1120640523300010401Terrestrial SoilVKIFWCVMAGLILLVGALALRVTGRPRPSPDCASSVVIVPGPHGQPVECVCIGGTVSTCFDPGP*
Ga0137392_1000638783300011269Vadose Zone SoilVRLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIAHGPHGEPIECVCIGGAVSTCFDPGP*
Ga0137392_1036684213300011269Vadose Zone SoilPTSWPSSGLSEDAVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP*
Ga0137391_1000964883300011270Vadose Zone SoilMAGLVLLVGVLALRVTGRPRPSPDCASSVVIAHGPHGEPIECVCIGGAVSTCFDPGP*
Ga0137389_1011842513300012096Vadose Zone SoilLCEDAVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIAHGPHGEPIECVCIGGAVSTCFDPGP*
Ga0137363_1010244723300012202Vadose Zone SoilVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPFECVCIGGAVSTCFDPGP*
Ga0137362_1070456333300012205Vadose Zone SoilVKLFWCVMAGLVLLVGALALRVTGRPRPSPDCASSVVIGRGPHGEPFECVCIGGAVSTCFDPGP*
Ga0137361_1035119523300012362Vadose Zone SoilVKLFWCVMAGLVLLVGALALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP*
Ga0137397_1002370173300012685Vadose Zone SoilMKTLGWVLTGLVLLVVVLAMQVMGRTRSMSGCTSSVVICRGPRGEPVECICVEGVVSTCFDSGP*
Ga0137397_1002836083300012685Vadose Zone SoilVKILGWVLAGLLLLVMVLAMQVMGRSRAVPGCTSSVVTGRGPHGEPVECVCVEGVISTCFDPGP*
Ga0137397_1021569553300012685Vadose Zone SoilWPSSGLCEDAVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP*
Ga0137395_1104916213300012917Vadose Zone SoilMKPFWWILTGLVLLVVVLSVPVMWPPRPSPDCTSNVVIVRGPHGEAAECVCVGGTTSTCFNPDP*
Ga0137396_1054038033300012918Vadose Zone SoilLLVGVLALRVTGRPRPSPDCASSVVIAHGPHGEPIECVCIGGAVSTCFDPGP*
Ga0137394_1003547473300012922Vadose Zone SoilMKTLGWVLTGLVLLVVVLAMQVMGRTRSMSGCTSSVVIGKGPRGEPVECVCVEGVVSTCFDPGP*
Ga0137407_1016863723300012930Vadose Zone SoilVKILGWVLGGLLLLVMVLAIQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFEPGP*
Ga0163163_1023743613300014325Switchgrass RhizosphereGLGLLVIALAVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNWTVSTCFEPGP*
Ga0182008_1075381013300014497RhizosphereMKLFWYVLAGLGLLVIALGVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGMVLTCFEPGP*
Ga0157377_1052922313300014745Miscanthus RhizosphereMKLFWYVLAGLGLLVIALAVGVAWRPAPSCDCTSTVIIGRGPHGEPVECVCVNGTVSTCFEPGP*
Ga0137411_128448313300015052Vadose Zone SoilILGWVLGGLLLLVMVLAMQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP*
Ga0137418_1060675433300015241Vadose Zone SoilLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP*
Ga0184610_112970123300017997Groundwater SedimentLAVLVVVLAVQVMGRTRPSPGCTSSVVIGRGPNGEPVECVCVEGVISTCFDPGP
Ga0184604_1027003023300018000Groundwater SedimentVKILGWVLGGLLLLVMVLAMQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Ga0184608_1019985923300018028Groundwater SedimentVKILGWVLGGLLLLVMVLAIQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Ga0184626_1000028093300018053Groundwater SedimentVKTFWWVLAGLAVLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Ga0184617_107981513300018066Groundwater SedimentERASRIEDGSGRGEEGPRGLPPGPLVPVRMLGWVLTGLLLLVVVLAIQVMGRPRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Ga0184618_1018009023300018071Groundwater SedimentVKILGWVLGGLLLLVMVLAMQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVAGVISTCFDPGP
Ga0184618_1039796223300018071Groundwater SedimentVKTFWWPLAGLVLLAMVLAVYVMARTRPSPDCTSSVVMGRGPHGEPVECVCVGGTISTCFGPGP
Ga0190265_1067209023300018422SoilVKTLWWVLAGLGLLVLVLAMQVMGRTRSVPGCSSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Ga0190265_1089708823300018422SoilVKPFWWILTGLVLLVIVLSVPVMWWTQASPDCTSTVVIVRGPHGEPVECVCVGGTLSTCFDPGP
Ga0190272_1093543523300018429SoilVKTFWWVLAGLAVLVVVLAVQVMGRTHPSPGCTSSVVIGRGPNGEPIECVCVEGVISTCFDPGP
Ga0190272_1255062723300018429SoilVKTFWWVLAGLAFLGVVLAVQVMGRTRPSPGCTSSVVIGRGPHGEPVECICVDGVVATCFHPGP
Ga0137408_112972313300019789Vadose Zone SoilGPLSPVKILGWVLGGLLLLVMVLAIQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFEPGP
Ga0137408_119743823300019789Vadose Zone SoilVKILGWVLGGLLLLVMVLAIQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFEPGP
Ga0193715_110824823300019878SoilGLSPGPLSPVKILGWVLGGLLLLVMVLAIQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Ga0193713_103481223300019882SoilMKTLGWVLTGLVLLVMVLAMQVMGRTRPVPGCTSTVVIGQGPRGEPVECVCVEGVVSTCFDPGP
Ga0193713_115729323300019882SoilVKIFWCVMAGLVLMVGVLALRVTGRPRPSPDCASSVVIVHGPHGEPVECVCIGGTVSTCFDPGP
Ga0193725_112689323300019883SoilTFWWVLAGLAVLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGEPIECVCVEGVISTCFDPGP
Ga0193755_101404433300020004SoilVKTFWWPLAGLVLLAMVLAVYVMARTRPSPDCTSSVVMGRGPHGEPVECVCIGGTISTCFGPGP
Ga0193755_115435823300020004SoilVKTFWWVLAGLAVLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGEPIECVCVEGVISTCFDPGP
Ga0193726_116389923300020021SoilMKIFWFVMAGLIVLTGVLALRVTGRPRPSADCASSVVIVQGPHGQPVECVCIGGTVSTCFDPGP
Ga0206356_1084943553300020070Corn, Switchgrass And Miscanthus RhizosphereMKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGTVSTCFEPGP
Ga0179594_1019114933300020170Vadose Zone SoilLSPVKILGWVLAGLLLLVMVLAMQVMGRSRAVPGCTSSVVTGRGPHGEPVECVCVEGVISTCFDPGP
Ga0210378_1001695933300021073Groundwater SedimentVKTFWWVLAGLAVLVVVLAVQVMGRTRPSPGCTSSVVIGRGPQGEPIECVCVEGVISTCFDPGP
Ga0193719_1008212733300021344SoilMKTLGWVLTGLVLLVMVLAMQVMGRTRPVHGCTSTVVIGQGPRGEPVECVCVEGVVSTCFDPGP
Ga0193719_1020669613300021344SoilALLVGVLGVQVMGRTRPSAGCTSSVVIVRGPHGEPVECVCFDGVVSTCFHPGP
Ga0210384_1009039733300021432SoilVKSFWWILTGLVLLVVVLSVPVMWRPRPSRDCTSNVVIVRGPHSEPVECVCVGGTVSTCFDPGP
Ga0210384_1178698213300021432SoilVKLFWCVMAGLVLLVGALALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFEPGP
Ga0182009_10000066153300021445SoilMKLFWYVLAGLGLLVIALGVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGTVSTCFEPGP
Ga0224452_101287023300022534Groundwater SedimentVKTFWWLLAGLAVLVVVLAVQVMGRTRPSPGCTSSVVIGRGPGGEPVECVCVEGVISTCFDPGP
Ga0207653_1001944833300025885Corn, Switchgrass And Miscanthus RhizosphereVKIFWCVMAGLVLLGGVLALRVTGRPRPSPDCASSVVIVHGPHGEAVECVCIGGTVSTCFDPGP
Ga0207684_1003011223300025910Corn, Switchgrass And Miscanthus RhizosphereVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP
Ga0207684_1021101123300025910Corn, Switchgrass And Miscanthus RhizosphereVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIVHRPHGEPIECVCIGGAVSTCFDPGP
Ga0207684_1069959723300025910Corn, Switchgrass And Miscanthus RhizosphereMKVFWCVMAGLLVLTLLLALRVTGRPRAAADCTSSVVIVHGPHGEPVECVCVGGAISTCFAPGP
Ga0207693_1070316913300025915Corn, Switchgrass And Miscanthus RhizosphereMKVFWCVMAGLLVLTLLLALRVTGRPRAGADCASSVVIVHGPHGEPVECVCVGGAISTC
Ga0207660_1026136333300025917Corn RhizosphereMRKRLPLNPSGRITDVKTFRWVIAGLAMLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGAPVECVCVDRVISTCFDPGP
Ga0207662_1002886253300025918Switchgrass RhizosphereMKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSSVIIGRGPHGEPVECVCVNGTVSTCFEPGP
Ga0207644_1020637053300025931Switchgrass RhizosphereMKLFWYVLAGLGLLVIALALGVAWRPAPSRDCTSSVIIGRGPHGEPVECVCVNGTVSTCFEPGP
Ga0207668_1028426243300025972Switchgrass RhizosphereMKLFWYVLAGLGLLVIALGVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGTVSTCF
Ga0207668_1121908333300025972Switchgrass RhizosphereGLGLLVIALAVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGTVSTCFEPGP
Ga0207703_1153082713300026035Switchgrass RhizosphereMKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSTAIIGRGPHGEPVECVCVNGTVSTCF
Ga0207676_1196982523300026095Switchgrass RhizosphereMKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGTVSTCF
Ga0209438_1000107183300026285Grasslands SoilMKTLGWVLTGLVLLVVVLAMQVMGRTRSMSGCTSSVVIGRGPRGEPVECVCVEGVVSTCFDSGP
Ga0209438_106191233300026285Grasslands SoilVKILGWVLGGLLLLVMVLAMQVMGRSRAVPGCTSSVVIGRGLHGEPVECVCVEGVISTCFDPGP
Ga0209240_102449253300026304Grasslands SoilVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIAHGPHGEPIECVCIGGAVSTCFDPGP
Ga0209131_100603293300026320Grasslands SoilMKTLGWVLTGLVLLVVVLAMQVMGRTRSMSGCTSSVVIGKGPRGEPVECVCVEGVVSTCFDPGP
Ga0257148_102044223300026345SoilFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPG
Ga0257170_105485023300026351SoilVKTFWWVLAGLAVLVVVLAVQVMGRTRPSPGCTSSVVIGRGPHGEPIECVCVEGVISTCF
Ga0257176_101209113300026361SoilVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCF
Ga0257146_100131983300026374SoilVKLFWCVMAGLVLLVSVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP
Ga0257160_103558923300026489SoilVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECMCIGGAVSTCFDPGP
Ga0257161_106662123300026508SoilVKIFWCVMAGLILLTGVLALRVTGRPRPSPDCASSVVIVPGPHGQPVECVCIGGTVSTCFDPGP
Ga0209074_1003769043300027787Agricultural SoilSMKLFWYVLAGLGLLVIALAVGVAWRPAPSRDCTSTVIIGRGPHGEPVECVCVNGTVSTCFEPGP
Ga0209526_1040650523300028047Forest SoilVKIFWFVMAGLILMVGVLALRVTGRPRPSADCTSSVIIAPGPHGRPVECVCIGGTVSTCFDPGP
Ga0257175_104296413300028673SoilPTSWPSCGLSEDAVKLFWCVMAGLVLLVGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP
Ga0307311_1019773823300028716SoilWVLGGLLLLVMVLAIQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Ga0307290_1020452813300028791SoilLGGLLLLVMVLAIQVMGRSRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Ga0307296_1020532423300028819SoilVKILGWVLGGLLLLVVVLAIQVMGRPRAVPGCTSSVVIGRGPHGEPVECVCVEGVISTCFDPGP
Ga0307312_1041152923300028828SoilVWTVKTFWWVLAGLALLVGVLGVQVMGRTRPSAGCTSSVVIVRGPHGEPVECVCFDGVVSTCFHPGP
Ga0307469_1003976773300031720Hardwood Forest SoilPRSDAWPRPRASSPRAILEDAVKIFWCVMAGLVLLGGVLALRVTGRPRPSPDCASSVVIVHGPHGEAVECVCIGGTVSTCFDPGP
Ga0307469_1007510353300031720Hardwood Forest SoilMKTLGWVLTGLVLLVMVLGMQVMGRTRPVPGCTSSVVIGQGPRGEPVECVCVEGVVSTCFDPGP
Ga0307468_10127940223300031740Hardwood Forest SoilVKPLAWVLTGLVLLVLVLAMQVMGRTRALPGCTSSVVIGHGPRGEPVECVCVEGVVSTCFDPGP
Ga0307473_1024384233300031820Hardwood Forest SoilVKLFWCVMAGLVLLVGVLALRVTGRPRPSLDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP
Ga0310899_1053803613300032017SoilVVKTFGWILAGLLLVALGLAVHVMGRTRPSRDCTSSVVIARGPHGQPVECVCVDGVIATCFNPGP
Ga0307470_1037626043300032174Hardwood Forest SoilVKTLAWVLTGLVLLVMVLAMQVMGRTRALPGCTSSVVIGHGPRGEPVECVCVEGVVSTCFDPGP
Ga0307471_10010098333300032180Hardwood Forest SoilVKTLAWVLTGLVLLVMVLAMQVMGRTRPLPGCTSSVVIGHGPRGELVECVCVEGVVSTCFDPGP
Ga0307471_10246262813300032180Hardwood Forest SoilVKTFWWVLAGLAMLAVVLAVQVMGRTRPSPGCTSSVVIGRGPHGEPVECVCVDGVVSTCFEPGP
Ga0307472_10001862683300032205Hardwood Forest SoilVKLFWCVMAGLVLLMGVLALRVTGRPRPSPDCASSVVIGRGPHGEPVECVCIGGAVSTCFDPGP
Ga0335085_1074400323300032770SoilMKPFWWTLTGLALLVMVLAVPVMWRTRPSPDCTSNVVIVRGPHGEPAECVCVGGALSTCFDPGP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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