Metagenome / Metatranscriptome Family F057255

Basic Information
Family ID	F057255
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	39 residues
Representative Sequence	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Number of Associated Samples	113
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.94 %
% of genes near scaffold ends (potentially truncated)	21.32 %
% of genes from short scaffolds (< 2000 bps)	91.91 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (69.118 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (13.235 % of family members)
Environment Ontology (ENVO)	Unclassified (27.206 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.059 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF08811	DUF1800	2.94
PF00589	Phage_integrase	1.47
PF13414	TPR_11	1.47
PF11954	DUF3471	0.74
PF13453	zf-TFIIB	0.74
PF13577	SnoaL_4	0.74
PF02641	DUF190	0.74
PF12697	Abhydrolase_6	0.74
PF13505	OMP_b-brl	0.74
PF01872	RibD_C	0.74
PF13683	rve_3	0.74
PF07676	PD40	0.74
PF00654	Voltage_CLC	0.74
PF04986	Y2_Tnp	0.74
PF00486	Trans_reg_C	0.74
PF07609	DUF1572	0.74
PF00127	Copper-bind	0.74
PF00034	Cytochrom_C	0.74
PF13432	TPR_16	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	2.94
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.74
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.74
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.74
COG1993	PII-like signaling protein	Signal transduction mechanisms [T]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.85 %
Unclassified	root	N/A	30.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.12 %
Unclassified	root	N/A	30.15 %
Viruses	superkingdom	All Organisms → Viruses	0.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.12 %
Unclassified	root	N/A	30.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.56 %
Unclassified	root	N/A	30.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.47 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.47 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.74 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.94 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.47 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.47 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.74 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.47 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	1.47 %
Baekduiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae	0.74 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.74 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.94 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.47 %
Baekduia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia	0.74 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.74 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.94 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.47 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.74 %
Rhizobium etli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli	0.74 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.94 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.47 %
Rhizobium etli CNPAF512	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	0.74 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.74 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02JWIBD	Not Available	501	Open in IMG/M
3300004025\|Ga0055433_10086029	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300004633\|Ga0066395_10776478	Not Available	573	Open in IMG/M
3300005332\|Ga0066388_100251211	All Organisms → cellular organisms → Bacteria	2407	Open in IMG/M
3300005332\|Ga0066388_100394744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2029	Open in IMG/M
3300005332\|Ga0066388_108610361	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005334\|Ga0068869_100717978	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005367\|Ga0070667_100720330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300005434\|Ga0070709_10956260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300005507\|Ga0074259_10892405	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005537\|Ga0070730_10701985	Not Available	641	Open in IMG/M
3300005617\|Ga0068859_101711714	Not Available	694	Open in IMG/M
3300005713\|Ga0066905_101238294	Not Available	669	Open in IMG/M
3300005764\|Ga0066903_100466790	All Organisms → cellular organisms → Bacteria → Proteobacteria	2119	Open in IMG/M
3300005764\|Ga0066903_101721460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1194	Open in IMG/M
3300005764\|Ga0066903_102029359	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300005764\|Ga0066903_102798267	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300005764\|Ga0066903_103143255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300005764\|Ga0066903_103667138	Not Available	826	Open in IMG/M
3300005764\|Ga0066903_105723318	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300005764\|Ga0066903_106173175	Not Available	626	Open in IMG/M
3300005764\|Ga0066903_106303193	Not Available	619	Open in IMG/M
3300005764\|Ga0066903_108446976	Not Available	525	Open in IMG/M
3300005829\|Ga0074479_10269394	Not Available	830	Open in IMG/M
3300006047\|Ga0075024_100362122	Not Available	728	Open in IMG/M
3300006059\|Ga0075017_101662205	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300006086\|Ga0075019_10576382	Not Available	704	Open in IMG/M
3300006791\|Ga0066653_10045491	All Organisms → cellular organisms → Bacteria → Acidobacteria	1804	Open in IMG/M
3300006797\|Ga0066659_10616822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300006844\|Ga0075428_100527803	All Organisms → cellular organisms → Bacteria → Acidobacteria	1262	Open in IMG/M
3300006845\|Ga0075421_100030268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6845	Open in IMG/M
3300006854\|Ga0075425_100935142	Not Available	990	Open in IMG/M
3300006854\|Ga0075425_102263941	Not Available	604	Open in IMG/M
3300006969\|Ga0075419_10215680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300009092\|Ga0105250_10319092	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300009094\|Ga0111539_10096984	All Organisms → cellular organisms → Bacteria → Acidobacteria	3463	Open in IMG/M
3300009094\|Ga0111539_10866847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300009098\|Ga0105245_11543133	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300009100\|Ga0075418_10106772	All Organisms → cellular organisms → Bacteria	2973	Open in IMG/M
3300009147\|Ga0114129_12566966	Not Available	608	Open in IMG/M
3300010043\|Ga0126380_10738253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300010048\|Ga0126373_10021804	All Organisms → cellular organisms → Bacteria	5427	Open in IMG/M
3300010329\|Ga0134111_10331352	Not Available	640	Open in IMG/M
3300010360\|Ga0126372_10202044	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300010360\|Ga0126372_12446615	Not Available	573	Open in IMG/M
3300010366\|Ga0126379_11217695	Not Available	859	Open in IMG/M
3300010366\|Ga0126379_12886573	Not Available	575	Open in IMG/M
3300010366\|Ga0126379_13545978	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010376\|Ga0126381_101366558	Not Available	1024	Open in IMG/M
3300010379\|Ga0136449_101223710	Not Available	1180	Open in IMG/M
3300010398\|Ga0126383_10701641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300010398\|Ga0126383_11642274	Not Available	732	Open in IMG/M
3300010937\|Ga0137776_1849832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1576	Open in IMG/M
3300011120\|Ga0150983_10387828	Not Available	587	Open in IMG/M
3300012189\|Ga0137388_12017279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012203\|Ga0137399_10181641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1699	Open in IMG/M
3300012211\|Ga0137377_10545654	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300012469\|Ga0150984_103022433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300012469\|Ga0150984_108154214	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300012498\|Ga0157345_1018873	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012505\|Ga0157339_1006894	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300012506\|Ga0157324_1013366	Not Available	741	Open in IMG/M
3300012511\|Ga0157332_1036145	Not Available	653	Open in IMG/M
3300012515\|Ga0157338_1010014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300012683\|Ga0137398_11132716	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012905\|Ga0157296_10086264	Not Available	827	Open in IMG/M
3300012917\|Ga0137395_10265433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300012944\|Ga0137410_10868328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300012951\|Ga0164300_10160760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300012971\|Ga0126369_10996387	Not Available	925	Open in IMG/M
3300012971\|Ga0126369_12392535	Not Available	614	Open in IMG/M
3300012986\|Ga0164304_10589868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300013296\|Ga0157374_11012969	Not Available	850	Open in IMG/M
3300015251\|Ga0180070_1025828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300015356\|Ga0134073_10199762	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300015359\|Ga0134085_10137202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300015371\|Ga0132258_10301411	All Organisms → cellular organisms → Bacteria	3941	Open in IMG/M
3300015371\|Ga0132258_13519834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1072	Open in IMG/M
3300015372\|Ga0132256_101108469	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300015373\|Ga0132257_100742861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300015374\|Ga0132255_104073852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	620	Open in IMG/M
3300015374\|Ga0132255_106068404	Not Available	511	Open in IMG/M
3300016294\|Ga0182041_10500264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1054	Open in IMG/M
3300016341\|Ga0182035_10645074	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300016371\|Ga0182034_10409522	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300016387\|Ga0182040_10795186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300017792\|Ga0163161_10714436	Not Available	835	Open in IMG/M
3300017823\|Ga0187818_10083488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1379	Open in IMG/M
3300017928\|Ga0187806_1045227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1330	Open in IMG/M
3300017961\|Ga0187778_10190816	Not Available	1303	Open in IMG/M
3300017961\|Ga0187778_10249081	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300017966\|Ga0187776_10184054	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300017972\|Ga0187781_10348194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300017995\|Ga0187816_10431941	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300018028\|Ga0184608_10431736	Not Available	569	Open in IMG/M
3300018053\|Ga0184626_10354394	Not Available	597	Open in IMG/M
3300018060\|Ga0187765_10240544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300018469\|Ga0190270_10143098	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300019264\|Ga0187796_1332162	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300020580\|Ga0210403_10463321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300022532\|Ga0242655_10101588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300022533\|Ga0242662_10055706	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300024219\|Ga0247665_1024019	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300025313\|Ga0209431_10511482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	913	Open in IMG/M
3300025915\|Ga0207693_11286576	Not Available	548	Open in IMG/M
3300025921\|Ga0207652_10737435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300025925\|Ga0207650_11281615	Not Available	624	Open in IMG/M
3300025933\|Ga0207706_10815193	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300025942\|Ga0207689_10694235	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300025947\|Ga0210067_1024898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300025972\|Ga0207668_10870287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300025986\|Ga0207658_10705869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300026548\|Ga0209161_10274728	Not Available	849	Open in IMG/M
3300027018\|Ga0208475_1009599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	949	Open in IMG/M
3300027041\|Ga0209876_1007607	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300027527\|Ga0209684_1054191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300027654\|Ga0209799_1024943	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300027824\|Ga0209040_10499659	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300027842\|Ga0209580_10286247	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300027873\|Ga0209814_10228340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300027874\|Ga0209465_10355566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300027909\|Ga0209382_10038872	All Organisms → cellular organisms → Bacteria → Acidobacteria	5706	Open in IMG/M
3300027909\|Ga0209382_10207135	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300028145\|Ga0247663_1055937	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300028803\|Ga0307281_10288105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300031547\|Ga0310887_10222612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300031573\|Ga0310915_11090089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	555	Open in IMG/M
3300031716\|Ga0310813_11811492	Not Available	573	Open in IMG/M
3300031744\|Ga0306918_11365479	All Organisms → cellular organisms → Bacteria → Terrabacteria group	544	Open in IMG/M
3300031753\|Ga0307477_10719644	Not Available	667	Open in IMG/M
3300031946\|Ga0310910_10460119	All Organisms → Viruses → Predicted Viral	1010	Open in IMG/M
3300032000\|Ga0310903_10210635	Not Available	915	Open in IMG/M
3300032261\|Ga0306920_100283909	All Organisms → cellular organisms → Bacteria	2468	Open in IMG/M
3300032782\|Ga0335082_10395849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1246	Open in IMG/M
3300033004\|Ga0335084_10724417	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300033158\|Ga0335077_12088111	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.79%
Host-Associated	Host-Associated	27.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.50%
Plants	Host-Associated → Plants	27.21%
Aquatic	Environmental → Aquatic	10.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.29%
Sediment	Environmental → Aquatic → Sediment	5.15%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Marine	Environmental → Aquatic → Marine	1.47%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Loam	Environmental → Terrestrial → Soil → Loam	17.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.47%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.74%
Sand	Environmental → Terrestrial → Soil → Sand	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.21%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.47%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.74%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.41%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.41%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.21%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.47%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.47%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.47%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.74%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.74%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.74%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.74%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015251	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293_16_10D	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025947	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027041	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057255

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_07230990	2170459010	Grass Soil	MSQIGEPLRIIEVEPREEPVPEKEVPFEEPADPVEEPA
Ga0055433_100860292	3300004025	Natural And Restored Wetlands	KEYSMSEIGEPLRIIEVEPREEPVPEKEIPFEQPADPVKEPA*
Ga0066395_107764781	3300004633	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPEKELPEKEVPFEQPADPVKEPA*
Ga0066388_1002512112	3300005332	Tropical Forest Soil	MSQIGEPLRIIEVEPREEPVPERDVPFEQPADPVAVPVKEPA*
Ga0066388_1003947442	3300005332	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPQKEVPFEQPADPIKEPAW*
Ga0066388_1086103611	3300005332	Tropical Forest Soil	KEYSMSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0068869_1007179781	3300005334	Miscanthus Rhizosphere	MSQIGEPLRIIEVEPLQEPVPEKEVPFEQPADPVKQPADPVKEPA*
Ga0070667_1007203302	3300005367	Switchgrass Rhizosphere	YSMSQIGEPLRIIEVEPLEEPVPEKEVPFEQPAYPVKEPA*
Ga0070709_109562602	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	YSMSQIGEPLRIIEVEPREEPVPEKEVPFEQPADPVKEPA*
Ga0074259_108924051	3300005507	Arabidopsis Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0070730_107019851	3300005537	Surface Soil	MSQIGEPLRIIEVEPREEPVPEKEVPFEQPADPVEEPA*
Ga0068859_1017117142	3300005617	Switchgrass Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPVDPVKEPA*
Ga0066905_1012382942	3300005713	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFVQPADPVKEPA*
Ga0066903_1004667904	3300005764	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVREPA*
Ga0066903_1017214603	3300005764	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPQREVPFEEPADPVKEPA*
Ga0066903_1020293592	3300005764	Tropical Forest Soil	MSQIGEPVRIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0066903_1027982671	3300005764	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPQKEVPFEQPADPVKEPA*
Ga0066903_1031432552	3300005764	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPAHPVKEPA*
Ga0066903_1036671382	3300005764	Tropical Forest Soil	MEYSMSQIGEPLRIIEVQPLEEPVPEKEVPFEQPADPVKEPA*
Ga0066903_1057233182	3300005764	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPPNPIKEPDDPVKEPA*
Ga0066903_1061731752	3300005764	Tropical Forest Soil	MSEIGEPLRIIEVEPREEPVPEKEVPFEQPADPVKEPAE*
Ga0066903_1063031931	3300005764	Tropical Forest Soil	MSQMGEPLRIIEVEPLKEPVPEKEVPFEQPADPVKEPA*
Ga0066903_1084469762	3300005764	Tropical Forest Soil	MSQIGEPLRIIEVEPLDEPVPEKEVPFELPADPVKEPA*
Ga0074479_102693942	3300005829	Sediment (Intertidal)	MSQIGEPLRIIEVEPQEEPVPEKEVPFEQPADPVKEPA*
Ga0075024_1003621222	3300006047	Watersheds	MSQIGEPLRIIEVEPREEPVPEREVPFEQPADPIKEPA*
Ga0075017_1016622052	3300006059	Watersheds	IGEPLRIIEVEPREEPVPEREVPFEQPADPVKEPA*
Ga0075019_105763822	3300006086	Watersheds	MSQIGEPLRIIEVEPREEPVPEREVPFEQPADPVKEPA*
Ga0066653_100454912	3300006791	Soil	MSQIGEPLRIIKVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0066659_106168222	3300006797	Soil	QIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKETA*
Ga0075428_1005278031	3300006844	Populus Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKE
Ga0075421_1000302685	3300006845	Populus Rhizosphere	MSQIGEPLRIIEVKPLEEPVPEKEVPFEQPADPVKEPA*
Ga0075425_1009351424	3300006854	Populus Rhizosphere	VSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKE
Ga0075425_1022639411	3300006854	Populus Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEP
Ga0075419_102156803	3300006969	Populus Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEIPFEQPADPVKEPA*
Ga0105250_103190922	3300009092	Switchgrass Rhizosphere	MSQIGEPLRIIEVEPREEPVPEKEVPFEQPADPVKEPA*
Ga0111539_100969844	3300009094	Populus Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPIKQPADPVKEPA*
Ga0111539_108668472	3300009094	Populus Rhizosphere	MSEIGEPLRIIEVEPLEEPVPEKEVPLEQPVDPVKEPA*
Ga0105245_115431332	3300009098	Miscanthus Rhizosphere	MSQIGEPLRIIEVEPRQEPVPEKEVPFEQPADPVEEPA*
Ga0075418_101067723	3300009100	Populus Rhizosphere	MSQIGEPLRIIEVEPLEEPIPEKEVPFEQPADPVKEPA*
Ga0114129_125669661	3300009147	Populus Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVK
Ga0126380_107382532	3300010043	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPQKEVPFEQPTDPVKEPA*
Ga0126373_100218042	3300010048	Tropical Forest Soil	MANIGEPLRIIEVEPREEPVPEKEVPFEQPADPVKEPA*
Ga0134111_103313522	3300010329	Grasslands Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEEPAEPVKEPA*
Ga0126372_102020442	3300010360	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPERELPFEQPADPVKEPA*
Ga0126372_124466152	3300010360	Tropical Forest Soil	MEYSMAQIGEPVRIIEVKPLEEPVPEKEVPFEQPADPVKEPA*
Ga0126379_112176951	3300010366	Tropical Forest Soil	MSQIGEPLRIIEVEPIEEPVPEKEVPFEQPADPVKEPA*
Ga0126379_128865732	3300010366	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPGDPVKEPA*
Ga0126379_135459782	3300010366	Tropical Forest Soil	GEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0126381_1013665583	3300010376	Tropical Forest Soil	MSQLGEPLRVIEVEPLEEPVPEKEVPFEQPADPVK
Ga0136449_1012237101	3300010379	Peatlands Soil	MSQIGEPLRIIEVEPREEPVPEKELPFEQPADPVKEPAE*
Ga0126383_107016412	3300010398	Tropical Forest Soil	MSQIGEPLRIIEIEPLEEPVPEKEVPFEQPAYPVK
Ga0126383_116422742	3300010398	Tropical Forest Soil	MSQIGEPLKIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0137776_18498323	3300010937	Sediment	MSQIGEPLRIIEVEPLEEPVPEKEPFEQPADPVKEPA*
Ga0150983_103878281	3300011120	Forest Soil	MSQIGEPLRIIAVEPLEEPVPQKEVPFEQPADPVKEPA*
Ga0137388_120172792	3300012189	Vadose Zone Soil	MSQIGEPLRVIEVEPLEEPVPEKEVPFEQPVDPVREPA*
Ga0137399_101816412	3300012203	Vadose Zone Soil	MSQIGEPLTIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0137377_105456541	3300012211	Vadose Zone Soil	MSQIGEPQRIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0150984_1030224332	3300012469	Avena Fatua Rhizosphere	MSQIGEPLRIIEVEPLEEPVPQKEVPFEQPAHPVKEPA*
Ga0150984_1081542142	3300012469	Avena Fatua Rhizosphere	MEYSMAQIGEPLRIIEVKPLEEPVPEKEVPFEQPVDPVKEPA*
Ga0157345_10188731	3300012498	Arabidopsis Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEREVPVPEKEVPFEQPADPVKEPA*
Ga0157339_10068942	3300012505	Arabidopsis Rhizosphere	MSQMGEPVRIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0157324_10133661	3300012506	Arabidopsis Rhizosphere	MSQIGEPLRIIEVEPLKEPVPEKEVPFEQPADPVKEPA*
Ga0157332_10361452	3300012511	Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPAKEPA*
Ga0157338_10100142	3300012515	Arabidopsis Rhizosphere	MSQIGEPIRIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0137398_111327161	3300012683	Vadose Zone Soil	KEYSMSQIGEPLRIIEVEPREEPVPEREVPFEQPADPVKEPA*
Ga0157296_100862642	3300012905	Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKQPADPVKEPA*
Ga0137395_102654332	3300012917	Vadose Zone Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPAAPVKEPA*
Ga0137410_108683282	3300012944	Vadose Zone Soil	MSQIGEPLRIIEVEPLGEPVPEKEVPFEQPADPVKEPA*
Ga0164300_101607603	3300012951	Soil	MSQIGEPLRIIEIEPLEEPVPGKEVPFEQPADPVKEPA*
Ga0126369_109963872	3300012971	Tropical Forest Soil	MANIGEPLRIIEVEPREEPVPEKEVPFEQPADPVEEPA*
Ga0126369_123925351	3300012971	Tropical Forest Soil	MAQIGNPLKIIEVEPLEEPVPEKEVPFDQPADPFKEPV*
Ga0164304_105898682	3300012986	Soil	IGEPLRIIEVEPLEEPVPEKEVPFEQPVDPVKEPA*
Ga0157374_110129692	3300013296	Miscanthus Rhizosphere	MSQIGGPVRIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0180070_10258281	3300015251	Soil	QIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA*
Ga0134073_101997621	3300015356	Grasslands Soil	SQIGEPLRIIEVEPLQEPVPEKEVPFEQPADPVKEPA*
Ga0134085_101372022	3300015359	Grasslands Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPAYPVKEPA*
Ga0132258_103014112	3300015371	Arabidopsis Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPIKEPA*
Ga0132258_135198342	3300015371	Arabidopsis Rhizosphere	MSQMGEPVRIIEVEPLEEPVPEKEVPFEQPADPAKEPA*
Ga0132256_1011084691	3300015372	Arabidopsis Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPDDPVKEPA*
Ga0132257_1007428613	3300015373	Arabidopsis Rhizosphere	MSQIGEPVRIIEVEPLEEPVPQKEAPFEQPADPVKEPA*
Ga0132255_1040738522	3300015374	Arabidopsis Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPV*
Ga0132255_1060684042	3300015374	Arabidopsis Rhizosphere	MSQIGEPLRTIEVEPLKDPVPEKEVPFEQPADPVREPA*
Ga0182041_105002643	3300016294	Soil	MSQIGEPLRVIEVEPLEEPVPEKEVPFEQPAAPVKEPA
Ga0182035_106450741	3300016341	Soil	MSEIGEPLRIIEVEPREEPVPEKEVPFEQPADPVKEPAE
Ga0182034_104095223	3300016371	Soil	MSQIGEPLRIIEVEPIEEPVPEKEVPFEQPADPVKEPA
Ga0182040_107951862	3300016387	Soil	MSQIGEPLRVIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0163161_107144362	3300017792	Switchgrass Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0187818_100834881	3300017823	Freshwater Sediment	MSQIGEPLRIIEVEPREEPVPEREVPFEQPADPVKEPA
Ga0187806_10452271	3300017928	Freshwater Sediment	EYSMSQIGEPLRIIEVEPREEPVPEREVPFEQPADPVKEPA
Ga0187778_101908161	3300017961	Tropical Peatland	MSQIGEPIRIIEVEPREEPVPEKEVPFEQPADPVT
Ga0187778_102490812	3300017961	Tropical Peatland	MANIGEPLRIIEVEPREEPVPEKEVPFEQPADPVKEPE
Ga0187776_101840541	3300017966	Tropical Peatland	MSQIGEPLRVIEVEPLEEPVPAKEVPFEQPADPVKEPA
Ga0187781_103481942	3300017972	Tropical Peatland	MSQIGEPLRIIEVEPREEPVPEREAPFEQPADPVKEPA
Ga0187816_104319411	3300017995	Freshwater Sediment	MSQIGEPLRIIEVEPFEEPVPEREVPFEQPADPVKEPA
Ga0184608_104317362	3300018028	Groundwater Sediment	MSEIGEPLRIIEVEPLEEPVPEKEVPLEQPADPVKE
Ga0184626_103543941	3300018053	Groundwater Sediment	MSEIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0187765_102405443	3300018060	Tropical Peatland	MSQIGEPVKIIEVEPREEPVPEKEIPFEEPADPVKEPA
Ga0190270_101430984	3300018469	Soil	MSQIGEPIRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0187796_13321621	3300019264	Peatland	MSQIGEPLRIIEVEPREEPVPERDVPFEQPADPVAVPVKEPA
Ga0210403_104633213	3300020580	Soil	MSQIGEPLRIIEVEPREEPVPEKEVPFEQPADPVKEPAY
Ga0242655_101015882	3300022532	Soil	MSQIGEPLRIIEVEPREEPVPEKEVPFELPADPVEEPA
Ga0242662_100557061	3300022533	Soil	MSQIGEPLRIIEVEPREEPVPEREVPFEQPSDPVKEPA
Ga0247665_10240191	3300024219	Soil	KEYSMSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0209431_105114822	3300025313	Soil	MEIGEPEREIEVWPLEEPVPEEMPVEAPEPVRIPA
Ga0207693_112865762	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSQIGEPLRVIEVEPLEEPVPQKEVPFEQPADPVKEPA
Ga0207652_107374352	3300025921	Corn Rhizosphere	MAQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0207650_112816152	3300025925	Switchgrass Rhizosphere	MSQIGEPVRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0207706_108151932	3300025933	Corn Rhizosphere	MSQIGEPLIIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0207689_106942351	3300025942	Miscanthus Rhizosphere	MSQIGEPLRIIEVEPLQEPVPEKEVPFEQPADPVKQPADPVKEPA
Ga0210067_10248981	3300025947	Natural And Restored Wetlands	MSQIGEPLRIIEVEPLEKPVPEKEVPFEQPADPVKEPA
Ga0207668_108702872	3300025972	Switchgrass Rhizosphere	MSQIGEPLRIIEVEPLEEPVPEKQVPFEQPADPVKEPA
Ga0207658_107058691	3300025986	Switchgrass Rhizosphere	SSDLLRIIEVEPLEEPVPEKEVPFEQPAYPVKEPA
Ga0209161_102747282	3300026548	Soil	MSQIGEPLRIIVVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0208475_10095991	3300027018	Soil	SMSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0209876_10076072	3300027041	Groundwater Sand	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKQPANPVKEPA
Ga0209684_10541911	3300027527	Tropical Forest Soil	GHARIIMKYSMSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0209799_10249432	3300027654	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPEKELPFEQPADPVKEPA
Ga0209040_104996592	3300027824	Bog Forest Soil	IGEPLRIIEVEPREEPVPEREVPFEQPADPVKEPA
Ga0209580_102862473	3300027842	Surface Soil	SQIGEPLRIIEVEPREEPVPEKEVPFEQPADPVEEPA
Ga0209814_102283402	3300027873	Populus Rhizosphere	MSQIGEPLRIIEVEPLEEPIPEKEVPFEQPADPVKEPA
Ga0209465_103555662	3300027874	Tropical Forest Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFVQPADPVKEPA
Ga0209382_100388723	3300027909	Populus Rhizosphere	MSQIGEPLRIIEVKPLEEPVPEKEVPFEQPADPVKEPA
Ga0209382_102071351	3300027909	Populus Rhizosphere	MSQIGDPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0247663_10559372	3300028145	Soil	MSQIGEPLRIIEVEPLKEPVPEKEVPFEQPADPVKEPA
Ga0307281_102881052	3300028803	Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVQEPA
Ga0310887_102226122	3300031547	Soil	MSEIGEPLRIIEVEPLEEPVPEKEVPLEQPVDPVKEPA
Ga0310915_110900892	3300031573	Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPIKEPA
Ga0310813_118114922	3300031716	Soil	MSQIGEPLRIIEVQPLEEPVPEKEVPFEQPADPVKEPA
Ga0306918_113654791	3300031744	Soil	RFCRKECGMSQIGEPLRIIEVEPLEEPVPQKEVPFEQPADPVKEPA
Ga0307477_107196442	3300031753	Hardwood Forest Soil	MSQIGEPLRIIEVEPLREPVPEKEVPFEQPADPVKEPA
Ga0310910_104601192	3300031946	Soil	ECSMSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKEPA
Ga0310903_102106351	3300032000	Soil	MSEIGEPLRIIEVEPLEEPVPEKEVPLEQPVDPVK
Ga0306920_1002839092	3300032261	Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPADPVKDPA
Ga0335082_103958492	3300032782	Soil	MSQIGEPIRIIEVEPREEPVPEKEVPFEQPADPVKEPA
Ga0335084_107244173	3300033004	Soil	MSQIGEPLRIIEVEPLEEPVPEKEVPFEQPAYPVKEPA
Ga0335077_120881112	3300033158	Soil	MSQIGEPLRIIEVKPREEPVPERDVPFEQPADPVAVPVKEPAQ

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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