Metagenome Family F057239

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057239
Family Type	Metagenome
Number of Sequences	136
Average Sequence Length	93 residues
Representative Sequence	MSWKSLGVLVAMLAFCASLMAQDKQSEPFLGIWEINLEKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKTSSAEVHPVAFDGKP
Number of Associated Samples	114
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.30 %
% of genes near scaffold ends (potentially truncated)	94.85 %
% of genes from short scaffolds (< 2000 bps)	96.32 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.265 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.529 % of family members)
Environment Ontology (ENVO)	Unclassified (33.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.324 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 23.48% β-sheet: 20.87% Coil/Unstructured: 55.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF03972	MmgE_PrpD	5.15
PF00753	Lactamase_B	4.41
PF07603	DUF1566	2.21
PF01436	NHL	2.21
PF00072	Response_reg	1.47
PF07681	DoxX	1.47
PF00990	GGDEF	1.47
PF12894	ANAPC4_WD40	1.47
PF07366	SnoaL	0.74
PF01370	Epimerase	0.74
PF12006	DUF3500	0.74
PF14524	Wzt_C	0.74
PF08450	SGL	0.74
PF01431	Peptidase_M13	0.74
PF04229	GrpB	0.74
PF13620	CarboxypepD_reg	0.74
PF13180	PDZ_2	0.74
PF01522	Polysacc_deac_1	0.74
PF07090	GATase1_like	0.74
PF06277	EutA	0.74
PF13426	PAS_9	0.74
PF06841	Phage_T4_gp19	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	5.15
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.47
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.47
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.74
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.74
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.74
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.74
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG4819	Ethanolamine utilization protein EutA, possible chaperonin	Amino acid transport and metabolism [E]	0.74
COG5426	Uncharacterized protein STM3548, contains class I glutamine amidotransferase domain	General function prediction only [R]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.26 %
Unclassified	root	N/A	0.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.26 %
Unclassified	root	N/A	0.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.26 %
Unclassified	root	N/A	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	90.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.21 %
Unclassified	root	N/A	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.47 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.47 %
Unclassified	root	N/A	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.97 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	2.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.47 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.74 %
Unclassified	root	N/A	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.97 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	2.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.47 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Unclassified	root	N/A	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.97 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	2.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.47 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.74 %
Unclassified	root	N/A	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.97 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	2.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.47 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.74 %
Unclassified	root	N/A	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100312940	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300000559\|F14TC_101822240	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300000955\|JGI1027J12803_101031961	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300002558\|JGI25385J37094_10112195	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300005167\|Ga0066672_10340366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300005172\|Ga0066683_10505003	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300005174\|Ga0066680_10760816	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300005175\|Ga0066673_10216526	All Organisms → cellular organisms → Bacteria → Acidobacteria	1099	Open in IMG/M
3300005178\|Ga0066688_10622427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300005180\|Ga0066685_10040575	All Organisms → cellular organisms → Bacteria → Acidobacteria	2947	Open in IMG/M
3300005186\|Ga0066676_10940235	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300005187\|Ga0066675_10953414	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300005365\|Ga0070688_100566303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	866	Open in IMG/M
3300005367\|Ga0070667_100754585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	902	Open in IMG/M
3300005444\|Ga0070694_100209521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1457	Open in IMG/M
3300005444\|Ga0070694_100347548	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300005444\|Ga0070694_101416962	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300005445\|Ga0070708_101688155	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300005445\|Ga0070708_101870935	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300005445\|Ga0070708_102092260	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300005446\|Ga0066686_10511134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300005447\|Ga0066689_10827810	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300005471\|Ga0070698_101232660	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300005471\|Ga0070698_102150993	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300005529\|Ga0070741_11708361	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300005540\|Ga0066697_10739085	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300005547\|Ga0070693_100272780	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300005548\|Ga0070665_101755898	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300005549\|Ga0070704_102016783	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300005552\|Ga0066701_10657346	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300005555\|Ga0066692_10277446	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300005556\|Ga0066707_10237661	All Organisms → cellular organisms → Bacteria → Acidobacteria	1186	Open in IMG/M
3300005561\|Ga0066699_10739359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300005561\|Ga0066699_10811597	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300005568\|Ga0066703_10741868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300005569\|Ga0066705_10508454	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300005615\|Ga0070702_100167796	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300005713\|Ga0066905_100518236	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300005718\|Ga0068866_11372554	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300006034\|Ga0066656_10819748	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300006046\|Ga0066652_101418390	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300006794\|Ga0066658_10265948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300006794\|Ga0066658_10474142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300006794\|Ga0066658_10541576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300006796\|Ga0066665_10865217	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300006797\|Ga0066659_11896950	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300006852\|Ga0075433_11614881	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300006854\|Ga0075425_100676574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300006903\|Ga0075426_10399481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300006903\|Ga0075426_10602180	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300006903\|Ga0075426_10887953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300006903\|Ga0075426_11244821	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300006904\|Ga0075424_101404890	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300006904\|Ga0075424_102569550	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300006954\|Ga0079219_10213643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300007076\|Ga0075435_101308040	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300007255\|Ga0099791_10446983	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300009012\|Ga0066710_101284373	All Organisms → cellular organisms → Bacteria → Acidobacteria	1135	Open in IMG/M
3300009012\|Ga0066710_101996804	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300009012\|Ga0066710_104056883	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300009137\|Ga0066709_104015879	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300009137\|Ga0066709_104393198	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300009156\|Ga0111538_12186095	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300009162\|Ga0075423_12607115	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300009176\|Ga0105242_10048566	All Organisms → cellular organisms → Bacteria	3449	Open in IMG/M
3300009553\|Ga0105249_11557770	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300010323\|Ga0134086_10444168	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300010329\|Ga0134111_10135434	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300010336\|Ga0134071_10234279	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300010398\|Ga0126383_13284132	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300010400\|Ga0134122_10422371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1184	Open in IMG/M
3300012198\|Ga0137364_10558936	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300012199\|Ga0137383_10155052	All Organisms → cellular organisms → Bacteria → Acidobacteria	1676	Open in IMG/M
3300012199\|Ga0137383_11337162	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300012200\|Ga0137382_10493851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300012201\|Ga0137365_10707435	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300012203\|Ga0137399_11241609	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300012203\|Ga0137399_11435519	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300012203\|Ga0137399_11720408	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300012206\|Ga0137380_11119656	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300012206\|Ga0137380_11631751	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300012207\|Ga0137381_11369350	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300012208\|Ga0137376_11224556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300012211\|Ga0137377_11431166	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300012212\|Ga0150985_108937299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	716	Open in IMG/M
3300012285\|Ga0137370_10789334	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300012349\|Ga0137387_10958610	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300012532\|Ga0137373_10349013	All Organisms → cellular organisms → Bacteria → Acidobacteria	1162	Open in IMG/M
3300012685\|Ga0137397_10128122	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300012685\|Ga0137397_10175578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1591	Open in IMG/M
3300012922\|Ga0137394_11314365	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300012944\|Ga0137410_10074587	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300012951\|Ga0164300_10741531	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300012960\|Ga0164301_11352312	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300012961\|Ga0164302_11126940	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300012971\|Ga0126369_11417677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300012989\|Ga0164305_11261648	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300014154\|Ga0134075_10490858	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300014157\|Ga0134078_10025984	All Organisms → cellular organisms → Bacteria → Acidobacteria	1888	Open in IMG/M
3300014166\|Ga0134079_10678290	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300014262\|Ga0075301_1127258	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300014745\|Ga0157377_11452272	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300015358\|Ga0134089_10380241	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300015359\|Ga0134085_10627433	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300015374\|Ga0132255_101564663	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300017656\|Ga0134112_10328819	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300017966\|Ga0187776_10847826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300018077\|Ga0184633_10244936	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300020016\|Ga0193696_1110277	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300025173\|Ga0209824_10345513	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300025893\|Ga0207682_10056268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1637	Open in IMG/M
3300025922\|Ga0207646_10565826	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300025927\|Ga0207687_10916729	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300025930\|Ga0207701_11251921	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300025941\|Ga0207711_10995149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	778	Open in IMG/M
3300026089\|Ga0207648_10754520	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300026314\|Ga0209268_1161553	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300026324\|Ga0209470_1101301	All Organisms → cellular organisms → Bacteria → Acidobacteria	1293	Open in IMG/M
3300026325\|Ga0209152_10401278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300026334\|Ga0209377_1214750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300026343\|Ga0209159_1101239	All Organisms → cellular organisms → Bacteria → Acidobacteria	1253	Open in IMG/M
3300026542\|Ga0209805_1335317	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300026550\|Ga0209474_10311605	All Organisms → cellular organisms → Bacteria → Acidobacteria	916	Open in IMG/M
3300027646\|Ga0209466_1069697	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300031226\|Ga0307497_10137456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300031231\|Ga0170824_110004223	All Organisms → cellular organisms → Bacteria → Acidobacteria	1270	Open in IMG/M
3300031234\|Ga0302325_10108537	All Organisms → cellular organisms → Bacteria	5161	Open in IMG/M
3300031720\|Ga0307469_10504215	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300031820\|Ga0307473_10818629	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300031954\|Ga0306926_11706301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300032180\|Ga0307471_102703409	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300032205\|Ga0307472_100216604	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300032205\|Ga0307472_100721340	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300032421\|Ga0310812_10516790	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300032783\|Ga0335079_11302481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.35%
Host-Associated	Host-Associated	17.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.88%
Plants	Host-Associated → Plants	17.65%
Aquatic	Environmental → Aquatic	1.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.68%
Freshwater	Environmental → Aquatic → Freshwater	0.74%
Sediment	Environmental → Aquatic → Sediment	0.74%
Peat	Environmental → Terrestrial → Peat	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.71%
Loam	Environmental → Terrestrial → Soil → Loam	13.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.47%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.47%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.47%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.74%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300025173	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1003129402	3300000559	Soil	MSWKTFVIAAVTLGCCSSLMAQDTQSEPFLGIWEINTTKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSAEVHPVAFDGKPHATTGGDVREI
F14TC_1018222402	3300000559	Soil	MSWKTLVVVIVTLGSCPSLMAQDKQSEPFLGIWEINLTRTVNYPQQSQMMINVPAPGGGFISTRATIAKENKSSSAEVHPVAFDGKPHATTGGD
JGI1027J12803_1010319611	3300000955	Soil	MSWKTLVVVMVTLGSGPSLVAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSSEIHPVAFDGKPHATTGGDVREITYKLIDPYTIERTHNRNG
JGI25385J37094_101121952	3300002558	Grasslands Soil	MSWKFLGVLIATLIFCASLMAQDKKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIHPVAFDGKPHQTSGGDAREISYKLIDPYTIERT
Ga0066672_103403661	3300005167	Soil	MSWKTVVIAVVMLGCCTTLKAQDKQSGPFLGIWEINLTKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSAEIH
Ga0066683_105050031	3300005172	Soil	MSWKFLGVLIATLIFCASLMAQDKKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIHPVAFDGKPHQTSGGDARE
Ga0066680_107608162	3300005174	Soil	MSWKSLVLLVATLAFDASLMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPGGFISTRATIGKENKSS
Ga0066673_102165263	3300005175	Soil	MKMSWKTFVIAVVTLGCCASLGAQDKQSGPFLGIWEINLTKTVNYPQQSQMVINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREITYKLIDPYTIERTH
Ga0066688_106224272	3300005178	Soil	MFRNTFAAIVVMLGCCTGLMAQDKQGGPFVGIWEVNLTKTVNYLQQSQMIINVPAPGGGFISTRATIA
Ga0066685_100405751	3300005180	Soil	MSWKSLVLLVATLAFDASLMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPGGGFISTRATIGK
Ga0066676_109402351	3300005186	Soil	MSWKTVVIAVVMLGCCTTLKAQDKQSEPFLGIWEINLTKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSAEIHPVGFDGKPYATTGGDAREISYKLIDPY
Ga0066675_109534142	3300005187	Soil	MFRNTFAAIVVMLGCCTGLMAQDKQGGPFLGIWEINLTKTVNYSQQSQMIINVPAPGGGFISTRATIAKENKSSSAEI
Ga0070688_1005663032	3300005365	Switchgrass Rhizosphere	MSRKTFVIAVVMLGCCTRLMAQDKQSEPFVGIWEINLTKTVNYPQQSQMMINVPAPGGGFISTRATIAKENKS
Ga0070667_1007545852	3300005367	Switchgrass Rhizosphere	MSRKTFVIAVVMLGCCTRLMAQDKQSEPFVGIWEINLTKTVNYPQQSQMMINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREISYKLIDP
Ga0070694_1002095211	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTLVVVMVTLGSGASLVAQDKQSEPFLGIWEINLARTVNYPQQSQMVINVPAPGGGFISTRATIGKENKSSSSEIHPVAFDGKPHATTGGDVREITYKLIDPYTIERTH
Ga0070694_1003475481	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIKGVGRRINMSWKTFVIAVVTVACCVSAWAQDKQSEPFLGIWEINLTKTVNYPQQSQMVINVPAPGGGFISTRATIGKENKSSSAEIHPVAFDGKPHATTGGDAR
Ga0070694_1014169621	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTFVIASVMLGCCSSLRAQDKQSDPFLGIWEINLAKTVNYPQQSQMMINVPAPGGGFISTRATIAKENKSSSTEIHPVAFDGKPHATTGGDV
Ga0070708_1016881551	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKSLGVLVAMLAFCASLMAQDKQSEPFLGIWEINLEKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKTSSAEVHPVAFDGKPHLTTGGDVREITYK
Ga0070708_1018709351	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTLVVMIVTLGSGPSLVAQDKQSEPFLGVWEINLTRTVNYPQQSQMMINVPAPGGGFISTRATIAKENKSSSSEIHPVAFDGKPHA
Ga0070708_1020922601	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTLVVVMVTLGSSPSLLAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPATGGGFISTRATIAKENKSSSSEIHPVAFDGKP
Ga0066686_105111342	3300005446	Soil	MFWKSFGVLIAMLAFSPILMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPGGGFISTRATIGKDNSRSSAEIHPVVFDGKPHQTTGGDARQISYKLIDPYTIERT
Ga0066689_108278101	3300005447	Soil	MSWKSLAVLIATLTFCASLTAQDKKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIH
Ga0070698_1012326602	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTLVVVMVTLGSSPSLVAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATIAKENKSSSSEIHPVAFDGK
Ga0070698_1021509931	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTLVVVMVTLGSSPSLLAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVP
Ga0070741_117083611	3300005529	Surface Soil	MTWKSLTTLAVMLVFCTSLTGQDKQIEPFLGIWEINLTKTVNYPQQSQMIINVPVAGGGFISTRATIAKGNK
Ga0066697_107390852	3300005540	Soil	MFWKSFGVLITTLAFSAILMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAAGGGFISTRATIGKDNSRSSAEVHPVAFDGKPHQTTGGDAR
Ga0070693_1002727801	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTFVIAVVTFGCCTGLQAQDKQSAPFLGIWEINVTKTANYPQQSQMIINVPSPDGGFISTR
Ga0070665_1017558982	3300005548	Switchgrass Rhizosphere	MSRKTFVIAVVMLGCCTRLMAQDKQSEPFVGIWEINLTKTVNYPQQSQMIINVPAPGGEFISTRATIG
Ga0070704_1020167831	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTLIVVMVTLGSGASLVAQDKQSEPFLGIWEINLARTVNYPQQSQMVINVPAPGGGFISTRATIGKENKSSSSEIHPVAFDGKP
Ga0066701_106573461	3300005552	Soil	MSWKSLGVLVAGLAFCTSLTAQDKQSEPFLGIWEINLEKTINYPQQSQTIINVPAAGGGFISTRATIGKENKSSSAEVHPVAFDGKPHLTTGGDVREITYKLIDPYTIERTHNRNG
Ga0066692_102774461	3300005555	Soil	MSWKSLGVLVAGLAFCTSLTAQDKQSEPFLGIWEINLEKTINYPQQSQMIINVPAPGGGFISTRATIGKENKSSSAEVHP
Ga0066707_102376611	3300005556	Soil	MSWKILVVLMSTLAFCASLTAQDKKSEPFLGIWELNLEKTANYLQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIH
Ga0066699_107393591	3300005561	Soil	MFWKSFGVLIAMLAFSAILMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPGGGFISTRATIGKDNSRSSAEIHPVVFDGKPHQTTGG
Ga0066699_108115972	3300005561	Soil	MSWKSLGVLVAMLAFCASLMAQDKQSEPFLGIWEINLEKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKTSSAEVHPVAFDGKP
Ga0066703_107418681	3300005568	Soil	MFWKSFGVLIGMLAFSATLMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPGDGFISTRATIGK
Ga0066705_105084542	3300005569	Soil	MFRNTFAAIVVMLGCCTGLMAQDKQGGPFLGIWEINLTKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSSEIHPVAFDGKPHATTGGDVRDITYKRIDPYTIERTHNR
Ga0070702_1001677963	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTLVIAMVTLGCCTSLQAQDKQSDPFLGIWEINLAKTVNYPQQSQMIINVPSPGGGFISTRATIG
Ga0066905_1005182362	3300005713	Tropical Forest Soil	MSWKSVVVLVATLAFDASLMAQDKQSEPFLGIWELNLEKTTNYPQQSQSMINVPAPGGFISTRATIGKENKSSSTEIHPVIFDGKPHQTTGGDAREISYRLIDPYTIERTHNRNGRISVD
Ga0068866_113725541	3300005718	Miscanthus Rhizosphere	MSRKTFVIAVVMLGCCTRLMAQDKQSEPFVGIWEINLTKTVNYPQQSQMIINVPAPGGEFISTR
Ga0068860_1009519891	3300005843	Switchgrass Rhizosphere	MSWKTLVVAIVALGSCPSLMAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGG
Ga0066656_108197481	3300006034	Soil	MSWKSLGVLVAGLAFCTSLMAQDKQSEPFLGIWEINLEKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKTSSAEVHPVAFDGKPHLTTGGDVREITYKLIDPYTIERTHNRNG
Ga0066652_1014183901	3300006046	Soil	MPWKSVVIAVVTFGCCIGLRAQDKQSEPFLGIWEINLTKTVNYPQQSQMVINVPAPGGGFISTRATIGKENKSSSSEIHPVAFDGKPHATTGGDA
Ga0066658_102659481	3300006794	Soil	MSRNTFAAIVVMLGCCTGLMAQDKQGGPFLGIWEINLTKTVNYPQQSQMIINVPAPGGGFISTRATIAKENKSSSAE
Ga0066658_104741421	3300006794	Soil	MFWKSFGVLIAMLAFSAILMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPGGGFISTRATIGKDNSRSSAEIHPVVFDGKPH
Ga0066658_105415762	3300006794	Soil	MSWKSLSVLVAMLAFSTCLMAQDKQSEPFLGIWEINLAKTTNYPQQSQMVINVPAPGGGFISTRATIGKENKTSSTEIQ
Ga0066665_108652171	3300006796	Soil	MKRSWKTFVITVVTVGCCTSLMAQDKQSAPFLGIWEINLAKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSSEIHPVAFDGKPHATTGGDAREITYKLIDPYTIERT
Ga0066659_118969501	3300006797	Soil	MSWKSLGVLVATLTFCTSLMGQDKQSEPFLGIWEINLAKTTNYPQQSQMIINVPAPGGGFISTRATIGK
Ga0075433_116148812	3300006852	Populus Rhizosphere	MSWKTFVIAVVTVACCVSAWAQDKQSEPFLGIWEINLTKTVNYPQQSQMVINVPAPGGGFISTRATIGKENKSSSAEIHPVAFDGKPHAT
Ga0075425_1006765742	3300006854	Populus Rhizosphere	MSWKTVVVMIVTLGSGASLIAQDKQSEPFLGIWEINLAKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKASSSEIHPVAFDGKPHATTGGDVREITYKLID
Ga0075426_103994811	3300006903	Populus Rhizosphere	MSWKSLAVLVAVLAFSTSFIAQDKQSEPFLGIWEINLAKTSNYPQQSQMVINVPAPGGGFISTRATIGQGNKTSSTEIHPVAFDGKPHATTGGDVRDITYK
Ga0075426_106021802	3300006903	Populus Rhizosphere	MSWKTLVVAIVALGSCPSLMAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFIS
Ga0075426_108879531	3300006903	Populus Rhizosphere	MSWKSLGVLVAMLAFCASLMAQDKQSEPFLGIWEINLEKTVNYPQQSQMIINMPAPGGGFISTRATIGKENKTSSAEVHP
Ga0075426_112448211	3300006903	Populus Rhizosphere	VVVLVATLAFDGSLMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPVGGFISTRATIGKENKSSSTEIHPVVFDGKPHQTTGGDAREISYKLIDPYTIERTHNRNGRI
Ga0075424_1014048901	3300006904	Populus Rhizosphere	MSWKTLVAVMVTLASSPSLFAQDKQSEPFLGIWEINLTRTVNYPQQSQMVINVPAPGGGFISTRATIAKENKSSSSEIHPVAFDGKP
Ga0075424_1025695501	3300006904	Populus Rhizosphere	MSRKTFVIAVVMLGCCTSVMAQDKQNEPFLGIWEINLTKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSSEIHPVAFDGKPHATTGGDVREITYKLTDPYTIERTHNRN
Ga0079219_102136433	3300006954	Agricultural Soil	MSWKTFVIAVVTVACCVSAWAQDKQSEPFLGIWEINLTKTVNYPQQSQMVINVPAPGGGFISTRATIGKENKSSSAEIHPVAFDGKPHATTGGDAREITYKLID
Ga0075435_1013080401	3300007076	Populus Rhizosphere	MSWKSVVVLVATLAFDASLMAQDKQSEPFLGIWELNLDKTTNYPQQSQTMINVPAPSGGFISTRATIGKENKSSSTEIHPVVFDGKPHETTGGDAREISYKLIDKYTIERTHNRNGRISV
Ga0099791_104469832	3300007255	Vadose Zone Soil	MSWKSLGVLVAMLAFCASLMAQDKQSELFLGIWEINLEKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKTSSAEVHPVAFDGKPHLTTGGDVREITYKLIDPYTIERTHNRNG
Ga0066710_1012843732	3300009012	Grasslands Soil	MSWKSLGVLVATLAFCTSLMAQDKQIEPFLGIWEINLAKTTNYPQQSQMIINVPSPGGGFISTRATIGKDNKSS
Ga0066710_1019968041	3300009012	Grasslands Soil	MSWKSLVLLVATLAFDASLIAQDKQNEPFLGIWELNLEKTTNYPQQSQTMINVPAPGGFISTRATIGKENKSSSTEIHPVVFDGKPHQTTGGDA
Ga0066710_1040568833	3300009012	Grasslands Soil	MSWKTLVVMIVTLGSGPSLVEQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATIAKENKSSSSEIHPVAF
Ga0066709_1040158791	3300009137	Grasslands Soil	MSWKSLGVLIVTLAFCASLAAQDKKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIHPVAFDGKPHQTSGGDAREI
Ga0066709_1043931981	3300009137	Grasslands Soil	MSWKTLVVMIVTLGSGPSLVAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATIAKENKSSSSEIHPVA
Ga0111538_121860952	3300009156	Populus Rhizosphere	MSWKTLAVFVVTLAGGATLAAQGTPSDPFLGIWEINLAKTVNYPNRSQTIINVPAAGGGFVSTRASIALDNKSGNVEVHPVAFDGK
Ga0075423_126071152	3300009162	Populus Rhizosphere	MEMSWKTFVIAVVMLGCCTSVMAQDKQNEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATISKENRSSSAEVHGPFRTYG*
Ga0105242_100485663	3300009176	Miscanthus Rhizosphere	MSWKTLVIAMVTLGCCTSLQAQDKQSDPFLGIWEINLAKTVNYPQQSQMIINVPSPGGGFISTRATIGKENKSSSAEIHPVAFDGKPHATTGGDAREIAYKLIDPYTIERTHNRNGRI
Ga0105249_115577701	3300009553	Switchgrass Rhizosphere	MSWKTLVVVMVTLGSGASLVAQDKQSEPFLGIWEINLARTVNYPQQSQMVINVPAPGGGFISTRATIAKENKSSSAEVHPVAFDGKPHATTGGDVREITYKLIDPYT
Ga0134086_104441681	3300010323	Grasslands Soil	MVVLVATLAFDASLMAQDKQSGPFLGIWELNLEKTTNYPQQSQTMINVPAPGGGFISTRATIGKDNKASSTEIHPVVFDGKPHQTTGGDAREISYKLIDPYTIERTHNRNGRISVDTE
Ga0134111_101354342	3300010329	Grasslands Soil	MNMSWKTVVIAVVMLGCCTTLKAQDKQSEPFLGIWEINLTKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSAEIHPVGFDGKPYATTGSNAREISYKLIEPYT
Ga0134071_102342792	3300010336	Grasslands Soil	MVVLVATLAFDASLMAQDKQSGPFLGIWELNLEKTTNYPQQSQTMINVPAPGGGFISTRATIGKDNKASSTEIHPVVFDGKPHQTTGGDAREISYKLIDSYTIERT
Ga0126383_132841322	3300010398	Tropical Forest Soil	MVAMLAFSASLLAQDKQIQPFLGIWEINVEKTANYPQQSQMIINVPTADGKGIISTRATIAKENKSSSAEIHPEYLDGKPYKTSGGDTREIAYKLVDPYTVERT
Ga0134122_104223711	3300010400	Terrestrial Soil	MSWKTLIVVMVTLGSGASLVAQDKQSEPFLGIWEINLARTVNYPQQSQMVINVPAPGGGFISTRATIGKENKSSSS
Ga0137364_105589363	3300012198	Vadose Zone Soil	MKMSWKTFVIAVVTLGCCASLGAQDKQSGPFLGIWEINLTKTVNYPQQSQMVINVPAPGGFISTRATIAKENKSSSAEIHPVAFDGKPHAT
Ga0137383_101550521	3300012199	Vadose Zone Soil	MSWKFLGVLIATLTFCGSLMAQDKKSEPFLGIWELNLEKTANYPQQSQTLINVPAPGGGFISTRATIVKENKSSSTEIHPVAFDGKPHQTSGGDAREIS
Ga0137383_113371622	3300012199	Vadose Zone Soil	MSWKTLVVAIVTLGSCPSLIAQDKQSEPFLGIWEINLTKTVNYPQQSQMVINVPAPGGGFISTRATIGKENQSSSSEIHPVAFDGKPHA
Ga0137382_104938513	3300012200	Vadose Zone Soil	MPWKSVVIAVVTFGCCIGLRAQDKQSEPFLGVWEINVTKTVNYPQQSQMVINVPAPGGGFISTRATIGKENKSSSAEIHPVAFDGKPHATTGGDAREIAYKLIDPYTIERTHNRNGKITVDT
Ga0137365_107074351	3300012201	Vadose Zone Soil	MSWKSLGVLVATLTFCTSLMGQDKQSEPFVGIWEINLAKTTNYPQQSQMIINVPAPGGGFISTRATIGKDNKSSSTEIHPVAFDGKPHPTTGGDAREISYKLIDPNTIERTHNRNGKIPF
Ga0137399_112416092	3300012203	Vadose Zone Soil	MSWKTSAVLIAALAICTSLIAQDKQSEPFLGIWEINLAKTTNYPQQSQTMVNVPAPGGGFISTRATIGKDNKSSSTEIHPVAFDGKPHPTTGGDAREISYKLINPNTIERTHNRNGK
Ga0137399_114355191	3300012203	Vadose Zone Soil	MSWKTLIVVMVALGSGPSLVAQDKQSEPFLGIWEINVTRTVNYPQQSQTMINVPAPGGGFISTRATIAKENKSSSSEIHPVAFDGKPHATTGGDAREITYKLIDPYTIERTHNRNG
Ga0137399_117204081	3300012203	Vadose Zone Soil	MNMSWKTVVIAVVMLGCCTTLKAQDKQSEPFLGVWEINLTKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSAEIHPVAFDGKPHATTGGDAREITYKLIDPYTIERTHNRNG
Ga0137380_111196561	3300012206	Vadose Zone Soil	MNMSWKTVVIAVVMLGCCTTLKAQDKQSEPFLGIWEINLTKTVNYPQQSQMIINVPAPGG
Ga0137380_116317511	3300012206	Vadose Zone Soil	MSWKSLGVLIATLAFCASLTAQDKKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIHPVAFDGKPHQTSGGDAREISYKLIDPYTIERTHNRSGKIS
Ga0137381_113693502	3300012207	Vadose Zone Soil	VLVATLAFDASLMAQNKQSEPFLGIWELNLEKTTNYPQLSQTMINVPRPVVVFISTRATIDKENKSSSTEIHPVVFDGKPPQTMEVMRARFPTN*
Ga0137376_112245561	3300012208	Vadose Zone Soil	MSWKSLAVVVAMLAFSASLKAQDKQIQPFLGIWEINVDKTANYPQQSQMILNVPSADGKGIISTRATIGKENKSSSAEIHPEYLDGKPYKTSGGDTREI
Ga0137377_114311661	3300012211	Vadose Zone Soil	MSWKFLIVVVAMLAFSASLMAQDKQIQPFLGIWEINVEKTANYPQQSQMIINVPTADGKGIISTRATIAKENKSSSAEIHPEYLDGKPYKTSGGDTREIA
Ga0150985_1089372991	3300012212	Avena Fatua Rhizosphere	MKMSWKTFVIAVVTFGCCTGLRAQDKQSQPFLGIWEINLTKTVNYPQQSQMVINVPAPDGGFISTRATIGKENKSSSAEIHP
Ga0137370_107893342	3300012285	Vadose Zone Soil	MKMSWKTFVIAVVTLVCCTSLGAQDKQSEPFLGIWEINLTKTVNYPQQSQMVINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKP
Ga0137387_109586101	3300012349	Vadose Zone Soil	VLVATLAFDASLMAQDKQSEPFLGIWELNLEKTTNYPQLSQTMINVPRPVVVFISTRATIDKENKSSSTEIHPVVFDGKPPQTTGGDAREISYKLIDPYREPRCTGGMQFFLSFKTRAF*
Ga0137373_103490132	3300012532	Vadose Zone Soil	MNMSWKTVVIAVVMLGSCTTLKAQDKQSEPFLGIWEINLTKTVNYPQQSQMIINVPAPGGGFISTRATIG*
Ga0137397_101281221	3300012685	Vadose Zone Soil	MSWKTLVVVMVTLGNGPSLVAQDKQSEPFLGIWEINVTRTVNYPQQSQMMINVPAPGGGFISTRATIAKENKSSSSEIHPVAFDGKPHATT
Ga0137397_101755781	3300012685	Vadose Zone Soil	MRDVHCARELHRPTLHRAKEDAMSWKTLVVVMVTLGSGPSLVAQDKQSEPFLGIWEINLTRTVNYPQQSQMMINVPAPGGGFISTRATIAKENKSSSS
Ga0137394_113143652	3300012922	Vadose Zone Soil	MSWKTLIVVMVTLGSGPSLVAQDKQSEPFLGIWEINVTRTVNYPQQSQMMINVPAPGGGFISTRATIAKENKSSSSEIHPV
Ga0137410_100745873	3300012944	Vadose Zone Soil	MSWKSLGVLVAGLAFCTSLTAQDKRSEPFLGIWEINLEKTINYPQQSQTIINVPAAGGGFISTRATIGKENKSSSAEVHPVAFDGKPHLTTGGDVREITYKLIDPYTIERTHNR
Ga0164300_107415311	3300012951	Soil	MSWKTLVVAIVALGSCPSLMAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREIAYKLIDPYTIER
Ga0164301_113523121	3300012960	Soil	MQAAKRRTPARELNRPTLHRAKEDAMSWKTLVVVMVTLGSAPSLVAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREIAYKL
Ga0164302_111269402	3300012961	Soil	MSWKTLVVAIVALGSCPSLMAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREIAYKL
Ga0126369_114176771	3300012971	Tropical Forest Soil	MSWKTLVVVAAMLAFSASLMAQDKQIQPFLGIWEINVEKTANYPQQSQMIINVPTADGKGIISTRATIAKENKSSSAEIHPEY
Ga0164305_112616481	3300012989	Soil	MSWKTLVVAIVALGSCPSLMAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREIAYKLIDPYTIERTHNRNGRITVDTE
Ga0134075_104908581	3300014154	Grasslands Soil	MSWKILVVLMSTLAFCASLTAQDKKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEI
Ga0134078_100259841	3300014157	Grasslands Soil	MSWKSLAVLIATLTFCASLTAQDKKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIHP
Ga0134079_106782902	3300014166	Grasslands Soil	MSWKTFVIAAVTLGCCASLRAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPGGFISTRATIGKENKSS
Ga0075301_11272581	3300014262	Natural And Restored Wetlands	MSWKTLVIAAVTLGCGSSVMAQDKQSEPFLGIWEINLTKTVNYPQQSQMIVNVPAPGGGF
Ga0157377_114522722	3300014745	Miscanthus Rhizosphere	MSWKTLVVAIVALGSCPSLMAQDKQSEPFLGIWEINLTKTVNYPQQSQMIVNVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREIAYKLIDPYTIERT
Ga0134089_103802412	3300015358	Grasslands Soil	MSHQGGEMFWKSFGVLITTLAFSAILMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAAGGGFISTRATIGKDNSRSSAEVHPVAFDGKPHQTTGGDAREITYKLIDPYTIERTHNRNGK
Ga0134085_106274331	3300015359	Grasslands Soil	MNMSWKTVVIAVVMLGCCTTLKAQDKQSEPFLGIWEINLTKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSAEIHPVGFDGKPYATTGGDAREISYKLIDPYT
Ga0132255_1015646632	3300015374	Arabidopsis Rhizosphere	MSWRSLGLLVAVLAFSASLMAQDKQSEPFLGVWEINLTKTTNYPQQSQMVINVPAPGGGFISTRATIGKENKTSSTEIHPVAFDGK
Ga0134112_103288192	3300017656	Grasslands Soil	MSWKSLVLLVATLAFDASLMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPGGFISTRATIGKENESSSTEIHTVVFDGKPHQTTGGDAREISYKLIDPYTIERTHNRNG
Ga0187776_108478262	3300017966	Tropical Peatland	MSWKSLVVAVAILAFSASLKAQDKQIQPFLGIWEINVEKTANYPQQSQMIINVPTADGKGIISTRATIGKENKSSSAEIHPEYLDG
Ga0184633_102449361	3300018077	Groundwater Sediment	MSWKILWVLVAALAFCTSLTAQDKQSEPFLGIWEINLEKTTNYPQQSQMMINVPAPGGGFISTR
Ga0193696_11102772	3300020016	Soil	MSWKMLVVVMVALGSGPSLVAQDKRSEPFLGIWEINVTRTVNYPQQSQMMINVPAPGGGFISTRATIGRENKSSSSEIHPVAFDGKPHATTGGDAREISYKLIDPYTIE
Ga0209824_103455131	3300025173	Wastewater	MSWKFLGVLVATLAFCTSLMAQDKQSEPFLGIWEINLAKTTNYPQQSQMIINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHLTTGGDVREITYK
Ga0207682_100562682	3300025893	Miscanthus Rhizosphere	MLGCCTRLMAQDKQSEPFVGIWEINLTKTVNYPQQSQMMINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREISYKLIDPYTIERTHNRNGRI
Ga0207646_105658263	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSWKTLVVVMVTLGSSPSLVAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAPGGGFISTRATIGKENKSSSSEIHPVAFDGKPHATTGGDAREITYKLIDPYTIER
Ga0207687_109167291	3300025927	Miscanthus Rhizosphere	MSRKTFVIAVVMLGCCTRLMAQDKQSEPFVGIWEINLTKTVNYPQQSQMIINVPAPGGEFISTRATIGKENKSSSAEIHPVAFDGKPHATTGGDAREISYKLIDPYTI
Ga0207701_112519211	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLEVGMTITDPKRYGLSSARAKEDAMSWKTLVVAIVALGSCPSLMAQDKQSEPFLGIWEINLTKTVNYPQQSQMIVNVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREIAYKLIDPYTIE
Ga0207711_109951492	3300025941	Switchgrass Rhizosphere	MSRKTFVIAVVMLGCCTRLMAQDKQSEPFVGIWEINLTKTVNYPQQSQMMINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHATTGGDAREISYKLIDPYTIE
Ga0207648_107545201	3300026089	Miscanthus Rhizosphere	MSWKTLVVVMVMLGSGASLVAQDKQSEPFLGIWEINLARTVNYPQQSQMVINVPAPGGGFISTRATIGKENKSSSSEIHPVAFDGKPHAT
Ga0209268_11615531	3300026314	Soil	MSWKILVVLMSTLAFCASLTAQDKKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIHPVAFDGKPHQTSGGDAR
Ga0209470_11013011	3300026324	Soil	MSWKILVVLMSTLAFCASLTAQDKKSEPFLGIWELNLEKTANYLQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIHPVAFDG
Ga0209152_104012781	3300026325	Soil	MFWKSFGVLIAMLAFSAILMAQDKQSEPFLGIWELNLEKTTNYPQQSQTMINVPAPGGGFISTRAT
Ga0209377_12147502	3300026334	Soil	MSWKSLGVLVAGLAFCTSLTAQDKQSEPFLGIWEINLEKTINYPQQSQTIINVPAAGGGFISTRATIGKENKSSSAEV
Ga0209159_11012392	3300026343	Soil	MSWKFLGVLIATLTFCASLTAQDKKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIHPVAFDGKPHQTSGGDAREISYKLIDPYTIE
Ga0209805_13353171	3300026542	Soil	MFRNTFAAIVVMLGCCTGLMAQDKQGGPFLGIWEINLTKTVNYPQQSQMIINVPAPGGGFISTRA
Ga0209474_103116052	3300026550	Soil	MSWKSLGVLVAMLAFCASLMAQDKQSEPFLGIWEINLEKTVNYPQQSQMIINVPAPGGGFISTRATIGKENKTSSAEVHPVAFDGKPHLTTGGDVREITYKLID
Ga0209466_10696972	3300027646	Tropical Forest Soil	MSWKTVVTAVVMLGCCTSLMAQDKQSEPFVGIWEINLTKTVNYPQQSQMIINVPAPGGGFLSTRATIAVSRSNAGSGAVSRMR
Ga0307497_101374561	3300031226	Soil	MSWKTFVVTVVTVGCCASLIAQDKQSGPFIGIWEINLTRTVNYPQQSQMIINVPAPEGGF
Ga0170824_1100042232	3300031231	Forest Soil	MSWKSLIVLFAMLAFCTSLMALDKESEPFLGIWEINVTKTANYPQQSQMIINVPAPGGGFISTRATIGKEN
Ga0302325_101085375	3300031234	Palsa	MSRKSLGVLVLTIAFCTALMAQQQQAPVFLGVWEIDLTRTTNYPQQSQMIINVPGPQGGFISTRATIGKDNKNSSSEIHPVVFDGQPQQTTGGDPRTISYKLVDPYTIERTHNRAGKIS
Ga0307469_105042151	3300031720	Hardwood Forest Soil	MRNRPPLHRAKEDAMSWKTLIVVMVTLGSGPSLVAQDKQSEPFLGIWEINLTRTVNYPQQSQMIINVPAAGGGFISTRATIAKENKSSSSEIHPVAF
Ga0307473_108186291	3300031820	Hardwood Forest Soil	MSWKSLVVVVAVLVVAAPLMAQDKSIQPFLGIWEINTEKTANYPQQSQMIINVPTADGKGIISTRATIAKENKSSSAEIHPEYLDGKPYKTSGGDTREIAYKLVDPYTVERTHNRGGKIT
Ga0306926_117063011	3300031954	Soil	MSWKSLGVVIVMLAFSASLVAQDKQIQPFLGIFEINLEKTTNYPQQSQMIINVPTPDGKGIISTRATIGKENKS
Ga0307471_1027034092	3300032180	Hardwood Forest Soil	MSRNTFAVIVVMLGCCISLMAQGTQSEPFLGIWEINLAKTVNYPQQSQMIINVPAPGGGFISTRATIGKDNKSSSAEV
Ga0307472_1002166043	3300032205	Hardwood Forest Soil	MSRNTFAVIVVMLGCCISLMAQGTQSEPFLGIWEINLTKTVNYPQQSQMVINVPAPGGGFISTRATIAKENKSSSAEIHPVAFDGKPHLTTGGDVREITYKLIDPYTIERTHNRNGRI
Ga0307472_1007213403	3300032205	Hardwood Forest Soil	MSWKSLAVLSVTLTFCASLMAQDQKSEPFLGIWELNLEKTANYPQQSQTMINVPAPGGGFISTRATIGKENKSSSTEIHPVAFDGKPHQTSGGDAREISYKLIDPYTIERTHN
Ga0310812_105167901	3300032421	Soil	MSWKTFVTAVVMLGCTTLMAQDKQSEPFVGIWEINLTKTVNYPQQSQMVINVPAPGGGFISTRATIGKENKS
Ga0335079_113024812	3300032783	Soil	MSWRSLAVAIAMLAFASSLKAQDKQIQPFLGIWEINTEKTANYPQQSQMIINVPTADGKGIISTRATI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F057239

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences