Metagenome / Metatranscriptome Family F057217

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057217
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	90 residues
Representative Sequence	VVEIAPRYDRRILEAVRALDDRAESMAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAYYDFMRSRVVDAYDVAERIREAGR
Number of Associated Samples	109
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.07 %
% of genes near scaffold ends (potentially truncated)	36.76 %
% of genes from short scaffolds (< 2000 bps)	80.88 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.824 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.471 % of family members)
Environment Ontology (ENVO)	Unclassified (34.559 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.92% β-sheet: 0.00% Coil/Unstructured: 43.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF02617	ClpS	20.59
PF02566	OsmC	19.12
PF02597	ThiS	12.50
PF00266	Aminotran_5	6.62
PF01243	Putative_PNPOx	5.15
PF00534	Glycos_transf_1	2.21
PF03167	UDG	1.47
PF02608	Bmp	1.47
PF02738	MoCoBD_1	1.47
PF02540	NAD_synthase	0.74
PF16363	GDP_Man_Dehyd	0.74
PF00188	CAP	0.74
PF08281	Sigma70_r4_2	0.74
PF00682	HMGL-like	0.74
PF13369	Transglut_core2	0.74
PF01590	GAF	0.74
PF02082	Rrf2	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	20.59
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	19.12
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	19.12
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	12.50
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	12.50
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	1.47
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.47
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.47
COG1744	Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN	Signal transduction mechanisms [T]	1.47
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	0.74
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	0.74
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	0.74
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.74
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.74
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.74
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.74
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	0.74
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	0.74
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.82 %
Unclassified	root	N/A	16.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.82 %
Unclassified	root	N/A	16.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.82 %
Unclassified	root	N/A	16.18 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.06 %
Unclassified	root	N/A	16.18 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72.06 %
Unclassified	root	N/A	16.18 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.50 %
Unclassified	root	N/A	16.18 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7.35 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	37.50 %
Unclassified	root	N/A	16.18 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6.62 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.50 %
Unclassified	root	N/A	16.18 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.94 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.50 %
Unclassified	root	N/A	16.18 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.94 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.50 %
Unclassified	root	N/A	16.18 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	2.21 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.50 %
Unclassified	root	N/A	16.18 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1.47 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000887\|AL16A1W_10295799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300000956\|JGI10216J12902_106217560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1412	Open in IMG/M
3300000956\|JGI10216J12902_110008747	All Organisms → cellular organisms → Bacteria	2319	Open in IMG/M
3300000956\|JGI10216J12902_111420872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1053	Open in IMG/M
3300001536\|A1565W1_10820798	Not Available	892	Open in IMG/M
3300001538\|A10PFW1_10422726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300001664\|P5cmW16_1036341	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300004114\|Ga0062593_100788605	Not Available	943	Open in IMG/M
3300004156\|Ga0062589_101110588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300004157\|Ga0062590_101977738	Not Available	604	Open in IMG/M
3300005176\|Ga0066679_10388075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300005181\|Ga0066678_10016991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3724	Open in IMG/M
3300005181\|Ga0066678_10229813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1194	Open in IMG/M
3300005446\|Ga0066686_10323782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300005450\|Ga0066682_10356707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	941	Open in IMG/M
3300005518\|Ga0070699_100032392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4513	Open in IMG/M
3300005552\|Ga0066701_10241998	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005553\|Ga0066695_10087906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1895	Open in IMG/M
3300005553\|Ga0066695_10317166	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005553\|Ga0066695_10540792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300005555\|Ga0066692_10899510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300005556\|Ga0066707_10792882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300005558\|Ga0066698_10601430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300005558\|Ga0066698_10967660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300005559\|Ga0066700_10473620	Not Available	876	Open in IMG/M
3300005559\|Ga0066700_10878887	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005560\|Ga0066670_10467110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300005574\|Ga0066694_10362663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	685	Open in IMG/M
3300005598\|Ga0066706_11462355	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006034\|Ga0066656_10051377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2380	Open in IMG/M
3300006034\|Ga0066656_10271943	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300006034\|Ga0066656_10948195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006797\|Ga0066659_11879063	Not Available	508	Open in IMG/M
3300009012\|Ga0066710_100035088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	5936	Open in IMG/M
3300009012\|Ga0066710_100617160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1647	Open in IMG/M
3300009012\|Ga0066710_100956510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1320	Open in IMG/M
3300009012\|Ga0066710_101847076	Not Available	909	Open in IMG/M
3300009038\|Ga0099829_10022571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4347	Open in IMG/M
3300009090\|Ga0099827_10000156	All Organisms → cellular organisms → Bacteria	25760	Open in IMG/M
3300009090\|Ga0099827_10566506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300009090\|Ga0099827_10576378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	970	Open in IMG/M
3300009137\|Ga0066709_100102792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3508	Open in IMG/M
3300009137\|Ga0066709_101187613	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300009137\|Ga0066709_102509577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300009801\|Ga0105056_1042847	Not Available	617	Open in IMG/M
3300009818\|Ga0105072_1015782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1356	Open in IMG/M
3300009837\|Ga0105058_1004112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2617	Open in IMG/M
3300010333\|Ga0134080_10072757	Not Available	1381	Open in IMG/M
3300010333\|Ga0134080_10353857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300010335\|Ga0134063_10326026	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300010335\|Ga0134063_10729485	Not Available	514	Open in IMG/M
3300011269\|Ga0137392_10538109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	970	Open in IMG/M
3300011270\|Ga0137391_10113649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2348	Open in IMG/M
3300011271\|Ga0137393_11337348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300011994\|Ga0120157_1045973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	952	Open in IMG/M
3300011998\|Ga0120114_1033489	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300011999\|Ga0120148_1046046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300012004\|Ga0120134_1054969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300012008\|Ga0120174_1110567	Not Available	672	Open in IMG/M
3300012011\|Ga0120152_1190875	Not Available	517	Open in IMG/M
3300012096\|Ga0137389_10480909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1065	Open in IMG/M
3300012199\|Ga0137383_11192407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300012200\|Ga0137382_10345748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300012201\|Ga0137365_10014576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6176	Open in IMG/M
3300012204\|Ga0137374_10000913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32412	Open in IMG/M
3300012204\|Ga0137374_10041843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4841	Open in IMG/M
3300012207\|Ga0137381_10129293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2162	Open in IMG/M
3300012208\|Ga0137376_11338431	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012208\|Ga0137376_11360512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300012209\|Ga0137379_10071117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3345	Open in IMG/M
3300012210\|Ga0137378_10124530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2380	Open in IMG/M
3300012211\|Ga0137377_10666579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	976	Open in IMG/M
3300012285\|Ga0137370_10444210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300012285\|Ga0137370_10937432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300012349\|Ga0137387_10274170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1218	Open in IMG/M
3300012350\|Ga0137372_10504139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	900	Open in IMG/M
3300012355\|Ga0137369_10003100	All Organisms → cellular organisms → Bacteria	17011	Open in IMG/M
3300012355\|Ga0137369_10456202	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300012356\|Ga0137371_10455129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300012358\|Ga0137368_10468697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	816	Open in IMG/M
3300012359\|Ga0137385_11164715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300012360\|Ga0137375_10939581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300012362\|Ga0137361_11027398	Not Available	744	Open in IMG/M
3300012929\|Ga0137404_10108154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2254	Open in IMG/M
3300012930\|Ga0137407_11003186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300012941\|Ga0162652_100040887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300013501\|Ga0120154_1157597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300013763\|Ga0120179_1036109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1162	Open in IMG/M
3300013768\|Ga0120155_1011283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3143	Open in IMG/M
3300013768\|Ga0120155_1194173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300014058\|Ga0120149_1023900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1438	Open in IMG/M
3300014150\|Ga0134081_10322834	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300014157\|Ga0134078_10378802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300015356\|Ga0134073_10171016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300015357\|Ga0134072_10358841	Not Available	562	Open in IMG/M
3300015358\|Ga0134089_10466406	Not Available	548	Open in IMG/M
3300015359\|Ga0134085_10550627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300018052\|Ga0184638_1000087	All Organisms → cellular organisms → Bacteria	21206	Open in IMG/M
3300018056\|Ga0184623_10211282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300018071\|Ga0184618_10247509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300018078\|Ga0184612_10443127	Not Available	647	Open in IMG/M
3300018433\|Ga0066667_10139234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1692	Open in IMG/M
3300019255\|Ga0184643_1078211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300020018\|Ga0193721_1035811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1312	Open in IMG/M
3300021073\|Ga0210378_10211375	Not Available	739	Open in IMG/M
3300021080\|Ga0210382_10449415	Not Available	571	Open in IMG/M
3300021344\|Ga0193719_10257461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300025915\|Ga0207693_10657834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300026326\|Ga0209801_1131695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1067	Open in IMG/M
3300026343\|Ga0209159_1219991	Not Available	588	Open in IMG/M
3300026524\|Ga0209690_1145072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300026542\|Ga0209805_1393862	Not Available	532	Open in IMG/M
3300026550\|Ga0209474_10252344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1085	Open in IMG/M
3300027006\|Ga0209896_1031274	Not Available	610	Open in IMG/M
3300027561\|Ga0209887_1000369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13487	Open in IMG/M
3300027577\|Ga0209874_1001907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6419	Open in IMG/M
3300027748\|Ga0209689_1384713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300027846\|Ga0209180_10015038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4047	Open in IMG/M
3300027882\|Ga0209590_10012013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4103	Open in IMG/M
3300027882\|Ga0209590_10140776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1486	Open in IMG/M
3300027882\|Ga0209590_10213224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1224	Open in IMG/M
3300028717\|Ga0307298_10169826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300028718\|Ga0307307_10199713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300028784\|Ga0307282_10151048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1099	Open in IMG/M
3300028787\|Ga0307323_10182029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300028791\|Ga0307290_10063945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1333	Open in IMG/M
3300028793\|Ga0307299_10383733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300028796\|Ga0307287_10350085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300028807\|Ga0307305_10234054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300028824\|Ga0307310_10286454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300028824\|Ga0307310_10319883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300028828\|Ga0307312_10335039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	988	Open in IMG/M
3300028828\|Ga0307312_10435024	Not Available	863	Open in IMG/M
3300028878\|Ga0307278_10036189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2249	Open in IMG/M
3300028881\|Ga0307277_10055856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1615	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.85%
Aquatic	Environmental → Aquatic	5.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.12%
Sediment	Environmental → Aquatic → Sediment	2.94%
Freshwater	Environmental → Aquatic → Freshwater	2.21%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.24%
Sand	Environmental → Terrestrial → Soil → Sand	4.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.21%
Loam	Environmental → Terrestrial → Soil → Loam	1.47%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	29.41%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	11.03%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.47%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	11.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.88%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.47%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL16A1W_102957991	3300000887	Permafrost	VVEIAPRYDGRILEAVRALDDRTESMAEISRRVGVAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRKILLESYYDFMQSRVVDAYDVAERIREAGR*
JGI10216J12902_1062175603	3300000956	Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRHIVAHREAEDAERARREEIRKILLDAYYDFMQSRVVDAYEVAERIREAGR*
JGI10216J12902_1100087473	3300000956	Soil	MAEISRRVGAAAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIARIWADVYFDVYRGKRVDAYDVADRIREAGT*
JGI10216J12902_1114208723	3300000956	Soil	VWIAPRYDSRILLAVRALDDRTQPMAEIARRVGAAAAELGLPKPSYVHLRRLILSHREEEDADRRRAEEIRQIAADVYLDLNRGRRVDVYDVEDRIRGAGR*
A1565W1_108207982	3300001536	Permafrost	MAEISRRVGIAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQVLYDAHYDFMRSRVVDAYDVAERIREAG
A10PFW1_104227261	3300001538	Permafrost	MVEIAPRYDGRILEAVRALDDRTESMAEISRRVGVAATQLGLPKPSYVHLRRYIVAHREEEDAERARREAIRKILLDAYYDFMQSRVVDAYDVADRIREAGR*
P5cmW16_10363413	3300001664	Permafrost	MAEISRRVGAAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRRILYDTYYDFMRSRVVNAYDVADRIREAGR*
Ga0062593_1007886052	3300004114	Soil	MAEISRRVGIAAAQLGLPKPSYVHVRRYIVAHREEEDAERARREEIRKILWDAYYDFMQSRVVDAYEVADRIREAGR*
Ga0062589_1011105882	3300004156	Soil	MAEISRRVGIAAAQLGLPKPSYVHVRRYIVAHREEEDAERARREEIRKILWDAYYDFMQSRVVDAYEIADRIREAGR
Ga0062590_1019777382	3300004157	Soil	MAEISRRVGIAAAQLGLPKPSYVHVRRYIVAHREEEDAERARREEIRKILWDAYYDFMQSRVVDAYEIADRIREA
Ga0066679_103880751	3300005176	Soil	VVELAPRYDRRILEAVRALDDRGEPMAEISRRVGVAAAQMGLPKPSYVHLRRYIVAQREEEDAERARREEIRRILADAYFDAMQSRVVNPYDVAERIREAGR*
Ga0066678_100169916	3300005181	Soil	MAEISRRVGAAAAEFGLPKPSYVHLRRLIVAHREEEDAERRRREEIRQILGEVYLDLHRGRVVNAYDVADRIREAGR*
Ga0066678_102298131	3300005181	Soil	VGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDLHRGRVVNAYDVADRIREAGR*
Ga0066686_103237822	3300005446	Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRFIVAHREEEDAERARREEIRRILYDAYYDVMRSRVVDAYDIADRIREAGR*
Ga0066682_103567072	3300005450	Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRRVLLDAYYDFMQSRVVDAYDVAERIREAGR*
Ga0070699_1000323925	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAEISRRIGVAAAQLGLPKPSYVHLRRYIVTHREEEDAERARRDEIRQILCDAYYDFMRSRVVDAYDVAERIREAGR*
Ga0066701_102419982	3300005552	Soil	MVEIAPRYDRRILEAVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHLRRFIVAHREEEDGERARREEIRRILYDAYYDVLRSRVVDAYDIADRIREAGR*
Ga0066695_100879062	3300005553	Soil	MAEISRRVGAAAAEFGLPKPSYVHLRRLIVAHREEEDAERKRREEIRQILGEVYLDLHRGRVVNAYDVADRIREAGR*
Ga0066695_103171663	3300005553	Soil	VWIAPRYDSRILVAVRALDDRTQPMAEIARRVGVAAAELGLPKPSYVHLRRLILAYREEEDADRRRAGEIRQIAADVYLDLNRGRRVDVYDVEDRIREAGR*
Ga0066695_105407922	3300005553	Soil	MAPRYDRRILEAVRALDDRTESISEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRRILLDAYYDFMQSRVVDAYDVAERIREAGR*
Ga0066692_108995101	3300005555	Soil	GFGLHKPSYVHVRRIILAHREEEDAERRRREEIRRILADVYLDMLGSRVVDPYEIAERIREAGR*
Ga0066707_107928822	3300005556	Soil	LEAVRALDDRAESIAEISRRVGVAGAQLGLPKPSYVHLRRYIVAQREEEDAERARRDEIRQIFYDAYYDFMRSRVVDAYDIADRIREAGR*
Ga0066698_106014302	3300005558	Soil	VVEIAPRYDRRILDAVRALDDRTESMAEISRRVGLAAAQLGLPKPSYVHVRRYIVAHREEEDAERARRDEIRQILYDAYYDFMRSRVVNAYDVAERIREAGR*
Ga0066698_109676602	3300005558	Soil	GLPKPSYVHLRRLIVAHREEEDAERKRREEIRQILGEVYLDLHRGRVVNAYDVADRIREAGR*
Ga0066700_104736201	3300005559	Soil	HEVGTVGCGRSGDPRFVVEIAPRYDPRILEAARALDDRGESMAEISRRVGIAAAQMGLPKPSYVHLRRYIVARREEEDAEHARREEIRGILVDAYFDAMQSRVVNAYEIAERIREAGR*
Ga0066700_108788871	3300005559	Soil	VVELAPRYDRRILEAVRALDDRGEPMAEISRRVGVAAAQMGLPKPSYVHLRRYIVAQREEEDAVRARREEIRRILLDAYFDAMQSRVVNPYDIAERIREAGR*
Ga0066670_104671102	3300005560	Soil	VVQIAPRYDPQILLAVRALDDRAEPMAEISRRVGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDLYRGRVVNAYDVADRIREAGR*
Ga0066699_108958151	3300005561	Soil	VVQIAPRYDPQILLAVRALDDRAEPMAEISRRVGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDL
Ga0066694_103626633	3300005574	Soil	ISRRVGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDLHRGRVVNAYDVADRIREAGR*
Ga0066706_114623551	3300005598	Soil	TQPMAEISRRVGAAAAEFGLPKPSYVHLRRLIVAHREEEDAERRRREEIRQILGEVYLDLHRGRVVNAYDVADRIREAGR*
Ga0066656_100513773	3300006034	Soil	VVEIAPRYDRRILEAVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHLRRFIVAHREEEDGERARREEIRRILYDAYYDVMRSRVVDAYDIAERIREAGR*
Ga0066656_102719432	3300006034	Soil	MDDKPTSISAVRALDDRTQPMAEIARRVGAAAAELGLPKPSYVHLRRLILSHREEEDADRRRAEEIRQIAADVYLDLNRGRRVDVYDVEDRIREAGR*
Ga0066656_109481951	3300006034	Soil	VGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEFVGSWGEAYLDLHRGRVVNAYDVADRIREAGR*
Ga0066659_118790632	3300006797	Soil	DDRAESIAEIARRVGVAAAQLGLPKPSYVHLRRYIMAQREEEDAERARREEIRQIFYDAYYDFMRSRVVDAYDIADRIREAGR*
Ga0066710_1000350884	3300009012	Grasslands Soil	MAEISRRIGAAAAEFGLPKPSYVHLRRLIVAHREEEDAERRRHEEIRQILGEVYLDLHRGRVVNAYDVADRIREAGR
Ga0066710_1006171602	3300009012	Grasslands Soil	MAEISRRVGTAAVELGLYKPSYPHLRRFIVAHREEEDAERRRREEILRILGDVYLDLNRARVVNAYDVAERIREAGR
Ga0066710_1009565102	3300009012	Grasslands Soil	VVQIAPRYDPQILLAVRALDDRAEPMAEISRRVGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDLHRGRVVNAYDVADRIREAGR
Ga0066710_1018470762	3300009012	Grasslands Soil	PLYDRSQPMAEIARRVGAPAAELGLPKASDVHLPRLILSRREEEDADRRRAEGIRQIAADVYLDLNRGRRVDVYDVEDRIREAGR
Ga0099829_100225717	3300009038	Vadose Zone Soil	LEAVRALDDRTESMAEISRRVGFAAAQFGLPKPSYVHLRRYIVAHRENEDFERARRAEIRRIFADVHFDVMRGKVVDAYEVAERIREAGR*
Ga0099827_1000015631	3300009090	Vadose Zone Soil	VVEIAPRYDRRILEAVRALDDRTEFMAEISRRVGVAAAQLGLPKPSYVHLRRFIVAYREEEDAERARREEIRRILYDAYYDVLRSRVVDAYDVAERIREAGR*
Ga0099827_105665062	3300009090	Vadose Zone Soil	MAPRYDPWILHAVRALDDRAESMAEISRRVGTAALELGLYKPSYVHMRRFIVAYREEEDAERTRREEILRVLGDVYLDLNRARVVNAYDVAE
Ga0099827_105763782	3300009090	Vadose Zone Soil	VVEIAPRYDCRILEAVRALDDRAESMAEISRRVGVAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRVVDAYDIAERIREAGR*
Ga0066709_1001027924	3300009137	Grasslands Soil	MVEIAPRYDLRILEAVRALDDRAESIAEIARRVGVAAAQLGLPKPSYVHLRRYIMAQREEEDAERARREEIRQIFYDAYYDFMRSRVVDAYDIADRIREAGR*
Ga0066709_1011876133	3300009137	Grasslands Soil	VVEIAPRYDRRILEAVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHLRRFIVAHREEEDGERARREEIRRVLYDAYYDVMRSRVVDAYDIADRIREAGR*
Ga0066709_1025095771	3300009137	Grasslands Soil	ALDDRAEPMAEISRRVGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDLHRGRVVNAYDVADRIREAGR*
Ga0105056_10428472	3300009801	Groundwater Sand	MVALAPRYDHRILEAVRALDDRSEPMAEISRRVGAAATAWGLHRPSYVHLRRLIVAHREREDAERVRREEILRILGDVYLDMYRGRLVNAYDVADRIREVRR*
Ga0105072_10157821	3300009818	Groundwater Sand	MVALAPRYDRRILEAVRALDDRSEPMAEISRRVGAAATAWGLHRPSYVHLRRLIVAHREREDAERVRREEILRILGDVYLDMYRGRLVNAYDVADRIREVRR*
Ga0105058_10041123	3300009837	Groundwater Sand	MVALAPRYDRRILEAVRALDDRSEPMAEISRRVGAAATAWGLHRPSYVHLRRLIVAHREREDAERVRRDEILRILGDVYLDMYRGRLVNAYDVADRIREVRR*
Ga0134080_100727572	3300010333	Grasslands Soil	VWIAPRYDSRILVAVRALDDRTQPMAEIARRVGAAAAELGLPKPSYVHLRRLILAHREEGDADRRRAGEIRQIAADVYLDLNRGRRVDVYDVEDRIREAGR*
Ga0134080_103538572	3300010333	Grasslands Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRRILLDAYYDFMQSRVVDAYDVAERIREAGR*
Ga0134063_103260263	3300010335	Grasslands Soil	AVRALDDRAEPMAEISRRVGAAAAELGLPKPSYVHLRRLIVAHREEEDAERRRHEEIRQILGEVYLDLHRGRVVNAYDVADRIREAGR*
Ga0134063_107294852	3300010335	Grasslands Soil	VEIAPRYDPRILEAVRALDDRAESIAEISRRVGVAAAQLGLPKPSYVHLRRYIMAQREEEDAERARREEIRQIFYDAYYDFMRSRVVDAYDIADRIREAGR*
Ga0137392_105381091	3300011269	Vadose Zone Soil	IAPRYDRRILEAVRALDDRAESMAEISRRVGVAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRVVNAYEIAERIREAGR*
Ga0137391_101136495	3300011270	Vadose Zone Soil	MAEISRRVGVAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRVVNAYEIAERIREAGR*
Ga0137393_113373482	3300011271	Vadose Zone Soil	MAEISRRIGVAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRVVNAYEIAERIREAGR*
Ga0120157_10459733	3300011994	Permafrost	VVEIAPRYDRRILEAVRALDDRAESMAEISRRVGIAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRVVDAYDVAERIREAGR*
Ga0120114_10334891	3300011998	Permafrost	VVEIAPRYDRRILEAVRALDDRAESMAEISRRVGAAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRRILYDTYYDFMRSRVVNAYDVADRIREAGR*
Ga0120148_10460461	3300011999	Permafrost	VRVVEIAPRYDGRILEAVRALDDRTESMAEISRRVGGGAAGLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRKILLESYYDFMQSRVVDAYDVAERIREAGR*
Ga0120134_10549691	3300012004	Permafrost	MAEISRRVGVAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRRILYDAYYDFMRSRVVDAYDVAERIREAGR*
Ga0120174_11105672	3300012008	Permafrost	VVEIAPRYDGRILEAVRALDDRTESMAEISRRVGVAAAELGLPNPSYVHLRRYIVAHREEEDAERARRDEIRKILLESYYDFMQSRVVDAYDVAERIREAGR*
Ga0120152_11908752	3300012011	Permafrost	VVEIAPRYDRRILEAVRALDDRTESMAEVSRRVGVAAAQLGLPKPSYVHLRRFIVAHREEEDAERARREEIRRILYDAYYDVMQSRVVDAYDIAERIRDAGR*
Ga0137389_104809091	3300012096	Vadose Zone Soil	AVRALDDRTESMAEISRRVGFAAAQFGLPKPSYVHLRRYIVAHRENEDFERARRAEIRRIFADVHFDVMRGKVVDAYEVAERIREAGR*
Ga0137383_111924071	3300012199	Vadose Zone Soil	GSRRPRGDAAHVVEIAPRYDRRILEAVRALDDRAESMAEISRRVGAAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQIFYDAHYDFMRSRVVDAYDVAERIREAGR*
Ga0137382_103457482	3300012200	Vadose Zone Soil	VVEIAPRYDRRILEAVRALDDRAESMAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIREILYDAYYDFMRSRVVDAYDVAERIREAGR*
Ga0137365_100145767	3300012201	Vadose Zone Soil	VVEIAPRYDRRILEAVWALDDRAESMAEISRRVGVTAAQLGLPKPSYVHLRRYIVARREEEDAQRARRDEIRQILYDAYYDFMRSRVVDAYDVAERIREAGR*
Ga0137374_1000091319	3300012204	Vadose Zone Soil	VVEIAPRYDGRILEAVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHIRRHILAHRKEEDAERARRDEIRKILLDAYYDFMQSRVVDAYDVAERIREAGR*
Ga0137374_100418433	3300012204	Vadose Zone Soil	MAEVTRRVGVAAAQMGLPKPSYVHLRRYIVAMREEEDAQRARREEIRQILVDAYFDAMQSRVVNAYDIAQRIREAGR*
Ga0137381_101292934	3300012207	Vadose Zone Soil	VVEIAPRYDRRIRETVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHLRRFIVAYREEEDAERARREEIRRILYDAYYDVMRSRVVDAYDIADRIREVGR*
Ga0137376_113384312	3300012208	Vadose Zone Soil	SRRVGAAAAEFGLPKPSYVHLRRLIVAHRDDEDAERRRREEIRKILGDVYFDLYRGRRVNAYDVADRIREAGR*
Ga0137376_113605121	3300012208	Vadose Zone Soil	IAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIREILYDAYYDFMRSRVVDAYDVAERIREAGR*
Ga0137379_100711176	3300012209	Vadose Zone Soil	VVEIAPRYDRRILEAVRALDDRAESMAEISRRVGAAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQIFYDAHYDFMRSRVVDAYDVAERIREAGR*
Ga0137378_101245304	3300012210	Vadose Zone Soil	VVEIAPRYDPRILEAVRALDDRAESIAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQIFYDAHYDFMRSRVVDAYDVAERIREAGR*
Ga0137377_106665792	3300012211	Vadose Zone Soil	MVEIAPRYDPRILEAVRALDDRAESIAEISRRVGVAAAQLGLPKPSYVHLRRRIVAHREEEDAERARRDEIREILYDAYYDFMRSRVVDAYDVAERIREAGR*
Ga0137370_104442102	3300012285	Vadose Zone Soil	VRALDDRTESMAEISRRVGTAAIELGLYKPSYAHLRRFIVAHREEEDAERRRREEILRILGDVYLDLNRARVVNAYV
Ga0137370_109374321	3300012285	Vadose Zone Soil	VVEIAPRYDRRILEAVRALDDRAESMAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIREILYDAYYDFMRSRVVDAYDIADRIREAGR*
Ga0137387_102741702	3300012349	Vadose Zone Soil	VVEIAPRYDRRILEAVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHLRRFIVAHREEEDGERARREEIRRILYDAYYDIMRSRVVDAYDVAERIREAGR*
Ga0137372_105041393	3300012350	Vadose Zone Soil	GLPKPSYVHLRRFIVAHRGEEDAERARREEILRILSDAYYDIMRSRVVDAYDVAERIREAGR*
Ga0137369_100031002	3300012355	Vadose Zone Soil	VVEIAPRYDGRILEAVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHIRRHILAHREEEDAERARRDEIRKILLDAYYDFMQSRVVDAYDVAERIREAGR*
Ga0137369_104562022	3300012355	Vadose Zone Soil	VVEIAPRYDARIRDAVRALDDRAEAMTEISRRVEAASPPSGCTKPSYVHLRRIIVAHREEEDAESRRREEIRRILGDIYLDMYRGRVVDPWDVTQRIREAGR*
Ga0137371_104551292	3300012356	Vadose Zone Soil	VVPIAPRYDAQILVLIRALDDRSESMAEISRRVGSAAVEMGLYKPSYVHLRRFIVSYREEEDAERRRREEILRILSDVYMDLNRARVVNAYDVAERIREAGR*
Ga0137368_104686972	3300012358	Vadose Zone Soil	MAEISRRVGSAAVEMGLYKPSYVHLRRFIVSYREEQDAERRRREEILRILGDVYLDLNRARVVNAYDVAERIREA
Ga0137385_111647152	3300012359	Vadose Zone Soil	QLGLQKPSYVHLRRSIGAPRGEEDTERARREEIRRILSDAYYDIMRSRVVDAYDVAERIREAGR*
Ga0137375_109395811	3300012360	Vadose Zone Soil	DARIRDAVRALDDRAESMAEISRRVGAAAAQLGLPKPSYVHLRRIIVAHREEEDAESRRREEIRRILGDIYLDMYRGRVVDPWDVTQRIREAGR*
Ga0137361_110273982	3300012362	Vadose Zone Soil	VVEIAPRYDPRILEAVRALDDRAESIAEIARRVGVAAAQLGLPKPSYVHLRRYIVAQREEEDAERARRDEIRQIFYDAYYDFMRSRVVDAYDIAERIREAGR*
Ga0137404_101081542	3300012929	Vadose Zone Soil	VVEIAPRYDRRILEAVRALDDRAESMAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAYYDFMRSRVVDAYDVAERIREAGR*
Ga0137407_110031862	3300012930	Vadose Zone Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAYYDFMRSRVVDAYDIAERIREAGR*
Ga0162652_1000408871	3300012941	Soil	PRRARSDAARVVEIAPRYDRRILEAVRALDDRTESMAEISRRVGVAAMQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRKILWDAYYDFMQSRVVDAYEVADRIREAGR*
Ga0120154_11575971	3300013501	Permafrost	VVEIAPRYDRRILEAVRALDDRQESMAEIARRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAYYDFMRSRVVDAYDVAERIREAGR*
Ga0120179_10361092	3300013763	Permafrost	VVEIAPRYDRRILEAVRALDDRAESMAEISRRVGVAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRVVDAYDVAERIREAGR*
Ga0120155_10112831	3300013768	Permafrost	ISRRVGVAATQLGLPKPSYVHLRRYIVAHREEEDAERARREAIRKILLDAYYDFMQSRVVDAYDVADRIREAGR*
Ga0120155_11941732	3300013768	Permafrost	VVEIAPRYDRRVVEAVRALDDRTESMAEISRRVGVAVAQLGLPKPSYVHLRRYIVAHRQEEDAERARRDDIRRILYDAYLDFMQSRVVDAYEIAERIREAGR*
Ga0120149_10239001	3300014058	Permafrost	MAEISRRVGIAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIPQILYDAHYDFMRSRVVDAYDVAERIREAGR*
Ga0134081_103228341	3300014150	Grasslands Soil	PRYDPQILLAVRALDDRAEPMAEISRRVGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDLHRGRVVNAYDVADRIREAGR*
Ga0134078_103788022	3300014157	Grasslands Soil	MDDRPTSISAVRALDDRTQPMAEIARRVGAAAAELGLPKPSYVHLRRLILSHREEEDADRRRPGEIRQIAADVYLDLNRGRRVDVYDVEDRIREAGR*
Ga0134073_101710161	3300015356	Grasslands Soil	VVEIAPRYDRRILEAVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHLRRFIVAHREEEDGERARREEIRRILYDAYYDVMRSRVVDAYDVAERIREAGR*
Ga0134072_103588412	3300015357	Grasslands Soil	VVQIAPRYDPQILLAVRALDDRAEPMAEISRRVGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDLHRGRVVNAYDVADRIREAGR*
Ga0134089_104664061	3300015358	Grasslands Soil	VVEIAPRYDRRILEAVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHLRRFIVADREEEDGERARREEIRRILYDAYYDVMRSRVVDAYDIAERIREAGR*
Ga0134085_105506272	3300015359	Grasslands Soil	VVQIAPRYDPQILLAVRALDDRTQPMAEISRRIGAAAAEFGLPKPSYVHLRRLIVAHREEEDAERRRHEEIRQILGEVYLDLHRGRVVNAYDVADRIREAGR*
Ga0184638_100008710	3300018052	Groundwater Sediment	MAEISRRVGVTAARFGLPKPSYVHVRRFILAHRERENAEAARRAEIREILMEAYLDMYRGRVVDAYEVADRIRDAGP
Ga0184623_102112822	3300018056	Groundwater Sediment	MAEISRRVGVTAARFGLPKPSYVHVRRFILAHREREDAEAARRAEIRGILMDAYLDMYRGRVVDAYEVADRIRDAGH
Ga0184618_102475092	3300018071	Groundwater Sediment	MVEIAPRYDPRIREAVRALDDRSVSMAEVSRRVGVAAAQLGLPKPSYVHLRRYIADHRAEEDAERARREEILRILADVYVDMLRSRVVNAYDVADRIREAGR
Ga0184612_104431272	3300018078	Groundwater Sediment	GLPKPSYVHVRRFILAHRERENAEAARRAEIREILMEAYLDMYRGRVVDAYEVADRTRDAGR
Ga0066667_101392343	3300018433	Grasslands Soil	VVQIAPRYDPQILLAVSALDDRAEPMAEISRRVGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDLHRGRVVNAYDVADRIREAGR
Ga0184643_10782112	3300019255	Groundwater Sediment	MVEIAPRYDPRIREAVRALDDRSVSMAEVSRRVGVAAAHLGLPKPSYVHLRRYIADHRAEEDAERARREEILRILADVYVDMLRSRVVNAYDVADRIREAGR
Ga0193721_10358112	3300020018	Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRVVDAYDIAERIREAGR
Ga0210378_102113751	3300021073	Groundwater Sediment	GVTAARFGLPKPSYVHVRRFILAHRERENAEAARRAEIREILMEAYLDMYRGRVVDAYEVADRTRDAGR
Ga0210382_104494151	3300021080	Groundwater Sediment	MAEISRRVGLAAAQLGLPKPSYVQLRRYIVAHREEEDAERARRDEIRKILLDAYYDFMQSRVVDAYDVAERIREAGR
Ga0193719_102574612	3300021344	Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDTERARRDEIRQILYDAHSDFMRSRIVDAYDIAERIREAGR
Ga0207693_106578342	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VVEIAPRYDPRILEAVRALDDRGEPMAEIARRVGRVAAELGLPKPSYVHLRRYIIELREEQDAARERRREIADILLDTYVDDPDATAATAF
Ga0209801_11316952	3300026326	Soil	MAEISRRVGAAAAEFGLPKPSYVHLRRLIVAHREEEDAERRRREEIRQILGEVYLDLHRGRVVNAYDVADRIREAGR
Ga0209159_12199911	3300026343	Soil	VGVAAAELGLPKPSYVHLRRLILAYREEEDADRRRAGEIRQIAADVYLDLNRGRRVDVYDVEDRIREAGR
Ga0209690_11450723	3300026524	Soil	RILEAVCALDDRTESMAEISRRVGVAAAQLGLPKPSYVHLRRFIVAHREEEDGERARREEIRRILYDAYYDVLRSRVVDAYDIADRIREAGR
Ga0209805_13938621	3300026542	Soil	VVQIAPRYDPQILLAVRALDDRAEPMAEISRRVGATAAELGLPKPSYVHLRRLIVAHREEEDAERRRREEIRRILGEAYLDLHRGRV
Ga0209474_102523442	3300026550	Soil	MTRRSSWRFALSQPMAEISRRVGAAAAEFGLPKPSYVHLRRLIVAHREEEDAERRRREEIRQILGEVYLDLHRGRVVNAYDVADRIREAGR
Ga0209896_10312742	3300027006	Groundwater Sand	MVALAPRYDHRILEAVRALDDRSEPMAEISRRVGAAATAWGLHRPSYVHLRRLIVAHREREDAERVRREEILRILGDVYLDMYRGRLVNAYDVADRIREVRR
Ga0209887_100036912	3300027561	Groundwater Sand	MAEISRRVGAAATAWGLHRPSYVHLRRLIVAHREREDAERVRREEILRILGDVYLDMYRGRLVNAYDVADRIREVRR
Ga0209874_10019074	3300027577	Groundwater Sand	MAEISRRVGAAATAWGLHRPSYVHLRRLIVAHREREDAERVRRDEILRILGDVYLDMYRGRLVNAYDVADRIREVRR
Ga0209689_13847131	3300027748	Soil	LEAARALDDRGESMAEISRRVGIAAAQMGLPKPSYVHLRRYIVARREEEDAEHARREEIRGILVDAYFDAMQSRVVNAYEIAERIREAGR
Ga0209180_100150381	3300027846	Vadose Zone Soil	LEAVRALDDRTESMAEISRRVGFAAAQFGLPKPSYVHLRRYIVAHRENEDFERARRAEIRRIFADVHFDVMRGKVVDAYEVAERIREAGR
Ga0209590_100120135	3300027882	Vadose Zone Soil	MAETCRRVGAAAAVLGLPKPSYVHLRRFIVAHREEEDAERRRREEIRRILGDAYVDLYRGRVVNAYDVADRIGEAGR
Ga0209590_101407762	3300027882	Vadose Zone Soil	MAEISRRVGVAAAELGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRVVDAYDIAERIREAGR
Ga0209590_102132241	3300027882	Vadose Zone Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRFIVAYREEEDAERARREEIRRILYDAYYDVLRSRVVDAYDV
Ga0307298_101698262	3300028717	Soil	VVEIAPRYDRRILETVRALDDRTESMAEISRRVGVAVAQLGLPKPSYVHLRRYIVAHRQEEDAERARRDEIRRILYDAYLDFMQSRVVDAYEIAERIREAGR
Ga0307307_101997131	3300028718	Soil	RVGVAVAQLGLPKPSYVHLRRYIVAHRQEEDAERARRDEIRRILYDAYLDFMQSRVVDAYEVAERIREAGR
Ga0307282_101510482	3300028784	Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDTERARRDEIRQILYDAHYDFMRSRIVDAYDIAERIREAGR
Ga0307323_101820292	3300028787	Soil	PRYDRRILESVRALDDRTESMAEISRRVGVAVAQLGLPKPSYVHLRRYIVAHRLEADAERARRDEIRRILYDAYLDFMQSRVVDAYEIAERIREAGR
Ga0307290_100639453	3300028791	Soil	MAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRIVDAYDIAERIREAGR
Ga0307299_103837332	3300028793	Soil	ALDDRTESMAEISRRVGLAAAQLGLPKPSYVHLRRYIVAHREEEDAEKARRDEIRKILLDAYYDFMQSRVIDAYDVGNRIREAGR
Ga0307287_103500852	3300028796	Soil	RSGSDAPRVVEIAPRYDRRILESVRALDDRTESMAEISRRVGVAVAQLGLPKPSYVHLRRYIVAHRQEEDAERARRDEIRRILYDAYLDFMQSRVVDAYEIAERIREAGR
Ga0307305_102340541	3300028807	Soil	SMAEISRRVGVAVAQLGLPKPSYVHLRRYIVAHRQEEDAERARRDEIRRILYDAYLDFMQSRVVDAYEIAERIREAGR
Ga0307310_102864542	3300028824	Soil	ATNCFRYEVATERSRARSDAASVVEIAPRYDGRILDAVRALDDRTESMAEISRRVGVAAAQLGLPKPSYVHLRRYIVAHRQEEDAERARRDEIRKILWDAYYDFMQSRVVDAYEVAERIREAGR
Ga0307310_103198832	3300028824	Soil	DRTESMAEISRRVGVAVAQLGLPKPSYVHLRRYIVAHRQEEDAERARRDEIRRILYDAYLDFMQSRVVDAYEVAERIREAGR
Ga0307312_103350392	3300028828	Soil	VVEIAPRYDRRILESVRALDDRTESMAEISRRVGVAVAQLGLPKPSYVHLRRYIVAHRQEEDAERARRDEIRRILYDAYLDFMQSRVVDAYEIAERIREAGR
Ga0307312_104350242	3300028828	Soil	MAEISRRVGVAAGQLGLPKPSYVHLRRFIVAHREEEDAERARREEIRRILYDAYYDAMRSRVVDAYDIAERIREAGR
Ga0307278_100361895	3300028878	Soil	ARSDAARVVEIAPRYDRRILEAVRALDDRTESMAEISRRVGVVAAQLGLPKPSYVHLRRYIVAHREQKDAERARRDEIRKILLDAYYDFMQSRVVDAYDVAERIREAGR
Ga0307277_100558561	3300028881	Soil	MAEISRRVGAAAAQLGLPKPSYVHLRRYIVAHREEEDAERARRDEIRQILYDAHYDFMRSRVVDAYDIAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057217

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences