Metagenome Family F057176

Overview

Basic Information

• Family ID: F057176
• Family Type: Metagenome
• Number of Sequences: 136
• Average Sequence Length: 43 residues
• Representative Sequence: MNDEQGQAIRNELKRFAGDLNLSDEQKTKLHERLAFAAGRLH
• Number of Associated Samples: 79
• Number of Associated Scaffolds: 136

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 90.44 %
• % of genes near scaffold ends (potentially truncated): 99.26 %
• % of genes from short scaffolds (< 2000 bps): 91.91 %
• Associated GOLD sequencing projects: 68
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (77.206 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.441 % of family members)
• Environment Ontology (ENVO): Unclassified (52.941 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (70.588 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 50.00%
  β-sheet: 0.00%
  Coil/Unstructured: 50.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF04226	Transgly_assoc	2.94
PF01594	AI-2E_transport	2.21
PF04367	DUF502	1.47
PF04264	YceI	1.47
PF14023	DUF4239	1.47
PF14534	DUF4440	1.47
PF00691	OmpA	1.47
PF07366	SnoaL	0.74
PF10518	TAT_signal	0.74
PF07478	Dala_Dala_lig_C	0.74
PF02796	HTH_7	0.74
PF02656	DUF202	0.74
PF06415	iPGM_N	0.74
PF02563	Poly_export	0.74
PF03992	ABM	0.74
PF03544	TonB_C	0.74
PF00011	HSP20	0.74
PF03279	Lip_A_acyltrans	0.74
PF07992	Pyr_redox_2	0.74
PF13474	SnoaL_3	0.74
PF05239	PRC	0.74
PF00072	Response_reg	0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.94
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	2.21
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	1.47
COG2928	Uncharacterized membrane protein	Function unknown [S]	1.47
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG0696	Phosphoglycerate mutase (BPG-independent), AlkP superfamily	Carbohydrate transport and metabolism [G]	0.74
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.74
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.74
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.74
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.74
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.74

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.21 %
Unclassified	root	N/A	22.79 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.21 %
Unclassified	root	N/A	22.79 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.21 %
Unclassified	root	N/A	22.79 %

Level 4

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	52.21 %
Unclassified	root	N/A	22.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.47 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.47 %

Level 5

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	52.21 %
Unclassified	root	N/A	22.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.94 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.47 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Level 6

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	47.79 %
Unclassified	root	N/A	22.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.47 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.47 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.74 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.74 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.74 %

Level 7

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	47.79 %
Unclassified	root	N/A	22.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	1.47 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.74 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.74 %

Level 8

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	47.79 %
Unclassified	root	N/A	22.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	1.47 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.74 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.74 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %

Level 9

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	47.79 %
Unclassified	root	N/A	22.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1.47 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.74 %
Dyella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella soli	0.74 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %

Level 10

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	47.79 %
Unclassified	root	N/A	22.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.74 %
Niastella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella	0.74 %
Dyella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella soli	0.74 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %

Level 11

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	47.79 %
Unclassified	root	N/A	22.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.74 %
Niastella caeni	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella caeni	0.74 %
Dyella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella soli	0.74 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2170459009|GA8DASG01CMPQB	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520
2170459011|GKWS7RC01EZH3G	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515
2189573000|GPBTN7E01CC5QF	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534
3300000579|AP72_2010_repI_A01DRAFT_1043641	All Organisms → cellular organisms → Bacteria	650
3300000893|AP72_2010_repI_A001DRAFT_1014160	All Organisms → cellular organisms → Bacteria	1343
3300002128|JGI24036J26619_10109772	All Organisms → cellular organisms → Bacteria	566
3300005093|Ga0062594_101473343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696
3300005289|Ga0065704_10682289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569
3300005294|Ga0065705_10849913	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591
3300005332|Ga0066388_102070811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1023
3300005332|Ga0066388_105048176	All Organisms → cellular organisms → Bacteria	670
3300005364|Ga0070673_101624576	All Organisms → cellular organisms → Bacteria	611
3300005713|Ga0066905_101734177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574
3300005764|Ga0066903_100693023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1793
3300005764|Ga0066903_100719035	All Organisms → cellular organisms → Bacteria	1765
3300005764|Ga0066903_101535209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1259
3300005764|Ga0066903_105026237	Not Available	701
3300005764|Ga0066903_105587930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662
3300005764|Ga0066903_106964168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586
3300006852|Ga0075433_10517717	All Organisms → cellular organisms → Bacteria	1049
3300006871|Ga0075434_100580125	All Organisms → cellular organisms → Bacteria	1141
3300006871|Ga0075434_101301636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738
3300009012|Ga0066710_100907637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1356
3300009147|Ga0114129_10295366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2161
3300010043|Ga0126380_10853011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	751
3300010046|Ga0126384_11205591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698
3300010329|Ga0134111_10177849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	853
3300010358|Ga0126370_12642812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503
3300010361|Ga0126378_12741147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563
3300010366|Ga0126379_10724813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1089
3300010366|Ga0126379_12923331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572
3300010375|Ga0105239_12141382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650
3300010376|Ga0126381_100390725	All Organisms → cellular organisms → Bacteria	1935
3300010376|Ga0126381_103567292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610
3300010376|Ga0126381_104404581	Not Available	544
3300010398|Ga0126383_12042606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	660
3300010398|Ga0126383_12412961	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella caeni	611
3300010868|Ga0124844_1031159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1705
3300012204|Ga0137374_10004067	All Organisms → cellular organisms → Bacteria	17393
3300012948|Ga0126375_10845022	All Organisms → cellular organisms → Bacteria	730
3300012948|Ga0126375_12116381	Not Available	500
3300013307|Ga0157372_11026510	All Organisms → cellular organisms → Bacteria	955
3300015371|Ga0132258_13866185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1019
3300015373|Ga0132257_104596953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502
3300015374|Ga0132255_101562337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	999
3300015374|Ga0132255_103537894	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664
3300016270|Ga0182036_10545875	Not Available	923
3300016270|Ga0182036_10779437	Not Available	778
3300016270|Ga0182036_11035988	Not Available	677
3300016270|Ga0182036_11232203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623
3300016294|Ga0182041_10352306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1238
3300016294|Ga0182041_10964579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	769
3300016294|Ga0182041_11098846	Not Available	722
3300016319|Ga0182033_10109236	All Organisms → cellular organisms → Bacteria	2053
3300016319|Ga0182033_10658080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	914
3300016319|Ga0182033_10800196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831
3300016319|Ga0182033_11263375	All Organisms → cellular organisms → Bacteria	663
3300016319|Ga0182033_12103280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515
3300016341|Ga0182035_10462627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1077
3300016341|Ga0182035_11323063	Not Available	645
3300016341|Ga0182035_11629026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582
3300016357|Ga0182032_11130961	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672
3300016371|Ga0182034_10220119	All Organisms → cellular organisms → Bacteria	1480
3300016371|Ga0182034_10521078	Not Available	994
3300016371|Ga0182034_10974931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	731
3300016371|Ga0182034_11568608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578
3300016387|Ga0182040_11278147	Not Available	619
3300016387|Ga0182040_11295760	Not Available	615
3300016387|Ga0182040_11442943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583
3300016404|Ga0182037_10133479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1846
3300016404|Ga0182037_10290650	Not Available	1309
3300016404|Ga0182037_10912376	Not Available	762
3300016404|Ga0182037_11634696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573
3300016422|Ga0182039_10184972	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1648
3300016422|Ga0182039_11348803	Not Available	647
3300016445|Ga0182038_10543775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	996
3300016445|Ga0182038_11836739	Not Available	547
3300017654|Ga0134069_1250389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616
3300017656|Ga0134112_10422686	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554
3300017657|Ga0134074_1156605	All Organisms → cellular organisms → Bacteria	798
3300017792|Ga0163161_10623522	All Organisms → cellular organisms → Bacteria	891
3300018051|Ga0184620_10350413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501
3300019362|Ga0173479_10712930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543
3300025315|Ga0207697_10407644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604
3300025972|Ga0207668_11018169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	741
3300025981|Ga0207640_11508733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604
3300026530|Ga0209807_1116746	All Organisms → cellular organisms → Bacteria	1108
3300027019|Ga0207857_1037350	Not Available	753
3300027045|Ga0207726_1040436	Not Available	641
3300027680|Ga0207826_1001220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	7332
3300027680|Ga0207826_1007129	All Organisms → cellular organisms → Bacteria	3027
3300027703|Ga0207862_1058699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1159
3300031057|Ga0170834_102503320	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2124
3300031446|Ga0170820_14553282	All Organisms → cellular organisms → Bacteria	1042
3300031446|Ga0170820_16449392	Not Available	1810
3300031682|Ga0318560_10616148	Not Available	588
3300031719|Ga0306917_10055631	All Organisms → cellular organisms → Bacteria	2681
3300031719|Ga0306917_11177576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → Dyella soli	595
3300031719|Ga0306917_11475644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523
3300031736|Ga0318501_10593461	Not Available	608
3300031736|Ga0318501_10609064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600
3300031744|Ga0306918_11024088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641
3300031771|Ga0318546_11258128	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520
3300031833|Ga0310917_10352458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	999
3300031879|Ga0306919_11230498	Not Available	568
3300031880|Ga0318544_10363230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563
3300031890|Ga0306925_10203929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2133
3300031890|Ga0306925_10310260	Not Available	1696
3300031890|Ga0306925_10369249	Not Available	1540
3300031890|Ga0306925_11054611	Not Available	825
3300031890|Ga0306925_11707434	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607
3300031890|Ga0306925_11865280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573
3300031910|Ga0306923_11530637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696
3300031910|Ga0306923_12145674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562
3300031912|Ga0306921_10083997	All Organisms → cellular organisms → Bacteria	3670
3300031912|Ga0306921_10589049	All Organisms → cellular organisms → Bacteria	1287
3300031912|Ga0306921_11152279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866
3300031912|Ga0306921_11401770	Not Available	768
3300031941|Ga0310912_10994786	Not Available	643
3300031942|Ga0310916_10642116	All Organisms → cellular organisms → Bacteria → Proteobacteria	900
3300031942|Ga0310916_10971074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	710
3300031945|Ga0310913_10194784	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1414
3300031945|Ga0310913_10631792	Not Available	759
3300031946|Ga0310910_11318760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557
3300031946|Ga0310910_11547274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508
3300031954|Ga0306926_10835409	All Organisms → cellular organisms → Bacteria	1108
3300031954|Ga0306926_11799287	Not Available	695
3300032001|Ga0306922_10204717	All Organisms → cellular organisms → Bacteria	2118
3300032001|Ga0306922_12130509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	543
3300032001|Ga0306922_12262839	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522
3300032001|Ga0306922_12414395	Not Available	501
3300032042|Ga0318545_10166022	Not Available	787
3300032261|Ga0306920_101127486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136
3300033289|Ga0310914_10089053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2632
3300033289|Ga0310914_10577755	Not Available	1014
3300033289|Ga0310914_11743451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Plants	Host-Associated → Plants	11.76%
Aquatic	Environmental → Aquatic	0.74%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.88%
Sediment	Environmental → Aquatic → Sediment	0.74%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.47%
Loam	Environmental → Terrestrial → Soil → Loam	11.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.74%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.94%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental
3300027019	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes)	Environmental
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_12195310	2170459009	Grass Soil	MIRDELKRFAGDINLSDEQKTKLHERLAFAAGRLFEYKKS
F64_02133020	2170459011	Grass Soil	MNDEQGQAIRNELKRFAGDLNLSDEQKTKLHERLAFAAGRLH
N55_10169790	2189573000	Grass Soil	MGISDEQGQAIRNELKRFAGDMNLSDEQKTKLHERLAFAAGRLFE
AP72_2010_repI_A01DRAFT_10436411	3300000579	Forest Soil	MNDEQAQAIRSELRRIAGDLNLSDEQKTKLHERMAFAAG
AP72_2010_repI_A001DRAFT_10141601	3300000893	Forest Soil	MNDEQAQAIRSELRRIAGDLNLSDEQKTKLHERMAFAAGRLFEYKKSH
JGI24036J26619_101097721	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAA
Ga0062594_1014733431	3300005093	Soil	MNEEQAQALGNELKRFAGDLNLSDEQKTKLRERLAFAAGRLHEY
Ga0065704_106822891	3300005289	Switchgrass Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLFE
Ga0065705_108499132	3300005294	Switchgrass Rhizosphere	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHE
Ga0066388_1020708111	3300005332	Tropical Forest Soil	MDISTEQGQMIRDEIKRFAGDINLSDEQKTKLHERLAFAA
Ga0066388_1050481761	3300005332	Tropical Forest Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERLVFAAGRLHEY
Ga0070673_1016245762	3300005364	Switchgrass Rhizosphere	MNDEQGQAIRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSNP
Ga0066905_1017341771	3300005713	Tropical Forest Soil	MTDEQAQAIGSELKRIAGDLNLSDEQKTKLRERMAFAAGRLHEYKKSHP
Ga0066903_1006930235	3300005764	Tropical Forest Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHPD
Ga0066903_1007190354	3300005764	Tropical Forest Soil	MNDEQAQAIGNELRRIGGELNLSDEQKTKLRERMAFA
Ga0066903_1015352091	3300005764	Tropical Forest Soil	MNDEQAQAVRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLYEYKKSH
Ga0066903_1050262371	3300005764	Tropical Forest Soil	MNDEQAQMIGNELKRIGGELNLSDEQKTKLRERLAFAA
Ga0066903_1055879302	3300005764	Tropical Forest Soil	MSLSPEQGQAIREALTRFAGDMNLSDEQKTKLHERLAF
Ga0066903_1069641683	3300005764	Tropical Forest Soil	MNLSDEQSQAIKNELKRFAGDINLSDEQKTKLHERLAFAAGRLHE
Ga0075433_105177171	3300006852	Populus Rhizosphere	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAA
Ga0075434_1005801251	3300006871	Populus Rhizosphere	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERMAFA
Ga0075434_1013016361	3300006871	Populus Rhizosphere	MNDEQGQAIRNELKRIAGDLNLSDEQKTKLHERMAFAAG
Ga0066710_1009076373	3300009012	Grasslands Soil	MSISEEQGQMIRNELKRFAGDINLSDEQKTKLHERLAFA
Ga0114129_102953663	3300009147	Populus Rhizosphere	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYK
Ga0126380_108530111	3300010043	Tropical Forest Soil	MNLTAEQAEAIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEYKKSHPN*
Ga0126384_112055913	3300010046	Tropical Forest Soil	MNDEQAQAIRNELKRFAGDINLSDEQKTKLHERLAFAAGRLHEYK
Ga0134111_101778492	3300010329	Grasslands Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEY
Ga0126370_126428122	3300010358	Tropical Forest Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRL
Ga0126378_127411471	3300010361	Tropical Forest Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKAKLHERMAFAAGRLHE
Ga0126379_107248134	3300010366	Tropical Forest Soil	MNDEQAQAIRNELKRIGGNLNLSDEQKTKLHERMAFAAGRLHEYKK
Ga0126379_129233311	3300010366	Tropical Forest Soil	MSLSDEQGQAIRNELKRFAGDMNLSDEQKTKLHERLAFAAGRLHE
Ga0105239_121413823	3300010375	Corn Rhizosphere	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLH
Ga0126381_1003907251	3300010376	Tropical Forest Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLFE
Ga0126381_1035672921	3300010376	Tropical Forest Soil	MNDEQGQAIRDELKRFAGDLNLSDEQKTKLHERMA
Ga0126381_1044045811	3300010376	Tropical Forest Soil	MNLTAEQVEGIKNELKRFGGDLNLSDEQKAKLHER
Ga0126383_120426061	3300010398	Tropical Forest Soil	MSLSPEQGQAIREALTRFAGDMNLSDEQKTKLHDRLA
Ga0126383_124129611	3300010398	Tropical Forest Soil	MSLTAEQAEAIKNELKRFAGDLNLSDEQKTKLHER
Ga0124844_10311593	3300010868	Tropical Forest Soil	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKK
Ga0137374_1000406720	3300012204	Vadose Zone Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERLAFAAGRLHEYKKSHP
Ga0126375_108450221	3300012948	Tropical Forest Soil	MNDEQGQAIRNELKRIGGELNLSDEQKAKLHERMAFAAGRLH
Ga0126375_121163811	3300012948	Tropical Forest Soil	MNLTEEQGLAIRNELKRIGGELNLSDEQKAKLHERLTVAAGR
Ga0157372_110265103	3300013307	Corn Rhizosphere	MGISDEQGQMIGNELKRFAGDINLSDEQKTKLHERLAFAAGRLF
Ga0132258_138661851	3300015371	Arabidopsis Rhizosphere	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLA
Ga0132257_1045969531	3300015373	Arabidopsis Rhizosphere	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRL
Ga0132255_1015623371	3300015374	Arabidopsis Rhizosphere	MNDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRL
Ga0132255_1035378942	3300015374	Arabidopsis Rhizosphere	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKS
Ga0182036_105458751	3300016270	Soil	MNLTAEQVEGIKSELKRIGGNLNLSDEQKTKLHERLTSAAEKLHEYKQ
Ga0182036_107794371	3300016270	Soil	MNLTAEQVEGIKSELKRIGGELNLSDEQKTKLHERLTSAAEKLHEYKQSH
Ga0182036_110359881	3300016270	Soil	MSLTAEQAEAIRNELKRIAVILNLSDEQKTKLHEHLN
Ga0182036_112322032	3300016270	Soil	MNLTAEQVDAIKNELKRIAGDLNLSDEQKTKLHERLASAAEKLHEYKKSHPNV
Ga0182041_103523061	3300016294	Soil	MSLSVEQAEAIKNELKRFAGDLNLSDEQKTKLHERLASAAEK
Ga0182041_109645793	3300016294	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKAKLHERMAFAAGRLHEY
Ga0182041_110988461	3300016294	Soil	MSLTAEQAEAIRNELKRIAVILNLSDEQKTKLHEHLNSAAESLHTEYQG
Ga0182033_101092361	3300016319	Soil	MNLTAEQVEGIKSELKRIGGDLKLSDEQKTKLHERLAFAAGRLHEYKKSH
Ga0182033_106580801	3300016319	Soil	MSLSAEQVEGIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEYK
Ga0182033_108001961	3300016319	Soil	MNLTAEQVEAIKNELKRIAGDLNLSDEQKTKLHERLASAAEKL
Ga0182033_112633752	3300016319	Soil	MSLTIEQGETIRNELRRFAGDLNLSDEQKTKLHEQLAFAAGRLHEYKKSHP
Ga0182033_121032802	3300016319	Soil	MSISVEQGQAIRNELKRIAGDLNLSDEQKTKLHEQMAFAAGRL
Ga0182035_104626271	3300016341	Soil	MNDEQAQAIRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLH
Ga0182035_113230631	3300016341	Soil	MSLTAEQAEAIKSELKRIGGELNLSDEQKTKLHERLTS
Ga0182035_116290261	3300016341	Soil	MSLTAEQVDVIKNEIKRIGGDLNLSDEQKTKLHERLASAAEKLHEYKASHPN
Ga0182032_111309612	3300016357	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYK
Ga0182034_102201191	3300016371	Soil	MSLSAEQVEGIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLH
Ga0182034_105210781	3300016371	Soil	MSLSIEQAEAIKNELKRFAGDLNLSDEQKTKLHERLA
Ga0182034_109749312	3300016371	Soil	MNDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKS
Ga0182034_115686082	3300016371	Soil	VGLSVEQAEAIKNELKRFAGDLNLSDEQKTKLHERLASAAE
Ga0182040_112781471	3300016387	Soil	MNLTAEQVDGIKSELKRIGGDLNLSDEQKTKLHERLTSAAEKLHEYKQ
Ga0182040_112957601	3300016387	Soil	MSLSAEQVEGIKNELKRIGGDLNLSDEQKTKLHERLASAAEKLHEYKKSHPNVT
Ga0182040_114429431	3300016387	Soil	MSLTAEQVEAIKNELKRIAGDLNLSDEQKTKLHERLASAAEKLHEYKKSHPN
Ga0182037_101334793	3300016404	Soil	MNDEQAQAIGSELKRIAGDLNLSDEQKTKLRERLVFAAGRLHEYKKSHPG
Ga0182037_102906502	3300016404	Soil	MSLTAEQADAIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEY
Ga0182037_109123761	3300016404	Soil	MNLTAEQVEGIKSELKRIGGELNLSDEQKTKLHERLTSAAEK
Ga0182037_116346962	3300016404	Soil	MNDEQAQAIRNELKRIGGELNLSDEQKTKLHERMAFAAG
Ga0182039_101849721	3300016422	Soil	MNLTAEQVEGIKNELKRFAGDLNLSDEQKAKLHERLTSAAEKLHEYKKSHP
Ga0182039_113488031	3300016422	Soil	MNLTAEQVDGIKSELKRIGGELKLSDEQKTKLHERLT
Ga0182038_105437752	3300016445	Soil	MSLSVEQVEGIKNELKRFAGDLNLSDEQKTKLHERLASAAEKL
Ga0182038_118367391	3300016445	Soil	MSLTAEQAEAIKSELKRIGGDLNLSDEQKTKLHERLASAAEKLHEYK
Ga0134069_12503891	3300017654	Grasslands Soil	MSISEEQGQMIRNELKRFAGDINLSDEQKTKLHER
Ga0134112_104226861	3300017656	Grasslands Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERLAFAAGRLYEYKKSH
Ga0134074_11566052	3300017657	Grasslands Soil	MNDEQAQAIRNELKRFAGDLNLSDEQKTKLHERLAFAAGRLFEYKKSHPE
Ga0163161_106235221	3300017792	Switchgrass Rhizosphere	MNDEQGQAIRNELKRFAGDINLSDEQKTRLHERLAFAAGRLFEYKKSH
Ga0184620_103504132	3300018051	Groundwater Sediment	MGISDEQGQMIGNELKRFAGDINLSDEQRTRLHERLAFA
Ga0173479_107129301	3300019362	Soil	MNEEQAQALRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLH
Ga0207697_104076442	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRL
Ga0207668_110181691	3300025972	Switchgrass Rhizosphere	MGISDEQGQMIGNELRRFAGDINLSDEQQTKLHERLAFAAGR
Ga0207640_115087331	3300025981	Corn Rhizosphere	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHARLAFAAGRL
Ga0209807_11167463	3300026530	Soil	MNDEEGKAIRHELKRFAGDLNLSDEQKIKLHERMAFAAGRLHEYK
Ga0207857_10373502	3300027019	Tropical Forest Soil	MSLSAEQGQMIRNELKRFAGDLHLSDEQKSKLHEQ
Ga0207726_10404361	3300027045	Tropical Forest Soil	MSLTAEQAEAIKNELKRIAGDLNLSDEQKTKLHERLTSAADKLHEYKKSHP
Ga0207826_10012201	3300027680	Tropical Forest Soil	MSLTAEQAEAIKNELKRIAGDLNLSDEQKTKLHERL
Ga0207826_10071291	3300027680	Tropical Forest Soil	MSLSAEQAEAIKNELKRIAGDLNLSDEQKTKLHERL
Ga0207862_10586993	3300027703	Tropical Forest Soil	MNLSAEQTEAIKSELKRFAGDLNLSDEQKTKLHERLTSAAEKLHE
Ga0170834_1025033201	3300031057	Forest Soil	MSFSEEQGQAIRNELKRFAGDINLSDEQRTKLHERL
Ga0170820_145532821	3300031446	Forest Soil	MGISDEQGQMIGNELKRFAGDINLSDEQKTRLHERL
Ga0170820_164493921	3300031446	Forest Soil	MGISDEQGQMIGNELRRFAGDINLSDEQKTKLHERLAFAAGRLF
Ga0318560_106161481	3300031682	Soil	MNLTPEQVDGIKSELKRIGGELNLSDEQKTKLHERLTSAA
Ga0306917_100556314	3300031719	Soil	MNEEQGQAIRNELKRFARDLNLSDEQKTKLHERMAFAAGRLHEYKKSH
Ga0306917_111775761	3300031719	Soil	MSLSAEQVEGIKNELKRFAGDLNLSDEQKTKLHERLASAAEK
Ga0306917_114756441	3300031719	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAA
Ga0318501_105934613	3300031736	Soil	MSLTDEQVEAIKNELKRIAGDLNLSDEQKTKLHERLTSAADKLH
Ga0318501_106090641	3300031736	Soil	MSLTDEQAGAIKNELKRIAGDLNLSDEQKTKLHERLA
Ga0306918_110240881	3300031744	Soil	MNDEQAQAIGSELKRIAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHP
Ga0318546_112581282	3300031771	Soil	MSLSAEQVEGIKNELKRIGGDLNLSDEQKTKLHERLASA
Ga0310917_103524581	3300031833	Soil	MNDEQGQAIRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSH
Ga0306919_112304981	3300031879	Soil	MSLSAEQVEGIKNELKRIGGDLNLSDEQKTKLHERLASAAEKLHEYKKS
Ga0318544_103632301	3300031880	Soil	MNLSAEQTEAIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEYKKS
Ga0306925_102039294	3300031890	Soil	MNDEQAQALGNELKRFAGDLNLSDEQKTKLRERLAFAAGR
Ga0306925_103102602	3300031890	Soil	MNLTAEQVEGIKSELKRIGGELNLSDEQKTKLHERLTSAAEKL
Ga0306925_103692491	3300031890	Soil	MNLTAEQVDGIKSELKRIGGDLNLSDEQKTKLHERLTSAAEKLHE
Ga0306925_110546111	3300031890	Soil	MSLTAEQAEAIKSELKRIGGELNLSDEQKTKLHERLTSAA
Ga0306925_117074342	3300031890	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKAKLHERMA
Ga0306925_118652801	3300031890	Soil	MNLTAEQAEAIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEYKKSHP
Ga0306923_115306371	3300031910	Soil	MSLSAEQVEGIKNELKRIGGDLNLSDEQKTKLHERLASAAEKLH
Ga0306923_121456742	3300031910	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKK
Ga0306921_100839976	3300031912	Soil	MNEEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAG
Ga0306921_105890491	3300031912	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKAKLHERMAFAAG
Ga0306921_111522792	3300031912	Soil	MSISVEQGQAIRNELKRIAGDLNLSDEQKTKLHEQMAFAAG
Ga0306921_114017701	3300031912	Soil	MNLTAEQVEGIKSELKRIGGELNLSDEQKTKLHERLTSAAEKLH
Ga0310912_109947862	3300031941	Soil	MNLTPEQVEGIKSELKRFAGDLNLSDEQKAKLHERLASAAEKLN
Ga0310916_106421161	3300031942	Soil	MSLSAEQVEGIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEY
Ga0310916_109710741	3300031942	Soil	MNLTAEQAEAIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEY
Ga0310913_101947841	3300031945	Soil	MSLSAEQVEGIKNELKRFAGDLNLSDEQKTKLHER
Ga0310913_106317921	3300031945	Soil	MSLSAEQVEGIKNELKRIGGDLNLSDEQKTKLHDRLASAA
Ga0310910_113187602	3300031946	Soil	MNEEQGQAIRNELKRFARDLNLSDEQKTKLHERMAFAA
Ga0310910_115472741	3300031946	Soil	MTDEQGQAIRNELKRFAGDLNLSDEQKTKLHERMAFAAGRLHEYKKSHP
Ga0306926_108354092	3300031954	Soil	MLSDEQGQAIRNELKRFAGDINLSDEQKTKLHERLAF
Ga0306926_117992872	3300031954	Soil	MSLTAEQADAIKNELKRFAGDLNLSDEQKTKLHERLAS
Ga0306922_102047171	3300032001	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAFAAGR
Ga0306922_121305091	3300032001	Soil	MSLTAEQVDGIKNELKRIGGDLNLSDEQKTKLHERMAAAA
Ga0306922_122628391	3300032001	Soil	MDISTEQGQMIRDELKRFAGDINLSDEQKTKLHERLAFAA
Ga0306922_124143951	3300032001	Soil	MNLTAEQVEGIKSELKRIGGNLNLSDEQKTKLHERLTSAAEKLH
Ga0318545_101660221	3300032042	Soil	MSLTDEQVEAIKNELKRIAGDLNLSDEQKTKLHERLTSAADKLHEYKKSHP
Ga0306920_1011274862	3300032261	Soil	MNLTAEQVDAIKNELKRIAGDLNLSDEQKTKLHERLASAAEKLHEYKK
Ga0310914_100890531	3300033289	Soil	MNDEQAQALRNEIKRFAGDLNLSDEQKTKLHERMAF
Ga0310914_105777553	3300033289	Soil	MNLTPEQVEGIKSELKRIGGDLNLSDEQKAKLHERLASAAEKL
Ga0310914_117434511	3300033289	Soil	MNLSAEQTEAIKNELKRFAGDLNLSDEQKTKLHERLASAAEKLHEY