Metagenome Family F056930

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056930
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	51 residues
Representative Sequence	TAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR
Number of Associated Samples	94
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	83.94 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.241 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.905 % of family members)
Environment Ontology (ENVO)	Unclassified (48.175 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.044 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.27% β-sheet: 0.00% Coil/Unstructured: 72.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00106	adh_short	5.11
PF07238	PilZ	2.92
PF02321	OEP	2.92
PF04255	DUF433	2.19
PF04909	Amidohydro_2	2.19
PF01872	RibD_C	2.19
PF07690	MFS_1	2.19
PF01590	GAF	1.46
PF13185	GAF_2	1.46
PF00083	Sugar_tr	1.46
PF01842	ACT	1.46
PF13466	STAS_2	1.46
PF00107	ADH_zinc_N	1.46
PF02954	HTH_8	0.73
PF07485	DUF1529	0.73
PF00378	ECH_1	0.73
PF04932	Wzy_C	0.73
PF01850	PIN	0.73
PF01161	PBP	0.73
PF01904	DUF72	0.73
PF07589	PEP-CTERM	0.73
PF13424	TPR_12	0.73
PF02678	Pirin	0.73
PF07366	SnoaL	0.73
PF07732	Cu-oxidase_3	0.73
PF00561	Abhydrolase_1	0.73
PF00557	Peptidase_M24	0.73
PF00665	rve	0.73
PF00486	Trans_reg_C	0.73
PF00440	TetR_N	0.73
PF14330	DUF4387	0.73
PF06649	DUF1161	0.73
PF07228	SpoIIE	0.73
PF05139	Erythro_esteras	0.73
PF08281	Sigma70_r4_2	0.73
PF03551	PadR	0.73
PF00873	ACR_tran	0.73
PF02812	ELFV_dehydrog_N	0.73
PF00719	Pyrophosphatase	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	5.84
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.19
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	2.19
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.19
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.73
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.73
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.73
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.73
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.73
COG2312	Erythromycin esterase homolog	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.73
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.73
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.73
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.73
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.73
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.73
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.73
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.73

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.24 %
Unclassified	root	N/A	8.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.24 %
Unclassified	root	N/A	8.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.24 %
Unclassified	root	N/A	8.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.12 %
Unclassified	root	N/A	8.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.92 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.72 %
Unclassified	root	N/A	8.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.72 %
Unclassified	root	N/A	8.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.11 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.72 %
Unclassified	root	N/A	8.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.11 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.72 %
Unclassified	root	N/A	8.76 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.73 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.72 %
Unclassified	root	N/A	8.76 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.73 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.72 %
Unclassified	root	N/A	8.76 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.73 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12270603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300001145\|JGI12682J13319_1017487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300002245\|JGIcombinedJ26739_100315969	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300002245\|JGIcombinedJ26739_100403551	Not Available	1246	Open in IMG/M
3300002907\|JGI25613J43889_10010730	All Organisms → cellular organisms → Bacteria → Acidobacteria	2541	Open in IMG/M
3300002914\|JGI25617J43924_10076015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1225	Open in IMG/M
3300002914\|JGI25617J43924_10080180	Not Available	1186	Open in IMG/M
3300002917\|JGI25616J43925_10235789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300005167\|Ga0066672_10612583	Not Available	705	Open in IMG/M
3300005435\|Ga0070714_102292805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005436\|Ga0070713_101688824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300005437\|Ga0070710_11410344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300005439\|Ga0070711_100372420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300005467\|Ga0070706_100885669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300005471\|Ga0070698_100875055	Not Available	844	Open in IMG/M
3300005536\|Ga0070697_100549449	Not Available	1013	Open in IMG/M
3300005536\|Ga0070697_100735015	Not Available	872	Open in IMG/M
3300005568\|Ga0066703_10356873	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300005586\|Ga0066691_10582154	Not Available	666	Open in IMG/M
3300005610\|Ga0070763_10837702	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005718\|Ga0068866_11469029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	500	Open in IMG/M
3300006028\|Ga0070717_10569123	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300006163\|Ga0070715_10553507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300006173\|Ga0070716_101409424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006176\|Ga0070765_102037881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300007255\|Ga0099791_10087939	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300007265\|Ga0099794_10017499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	3196	Open in IMG/M
3300007265\|Ga0099794_10474757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300009038\|Ga0099829_10670192	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300009143\|Ga0099792_10486723	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300010159\|Ga0099796_10240592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300010403\|Ga0134123_10945696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300011269\|Ga0137392_10808172	Not Available	774	Open in IMG/M
3300011269\|Ga0137392_11526185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300011270\|Ga0137391_10415034	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300011271\|Ga0137393_10066955	All Organisms → cellular organisms → Bacteria	2854	Open in IMG/M
3300011271\|Ga0137393_10161884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1875	Open in IMG/M
3300012096\|Ga0137389_10027497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4085	Open in IMG/M
3300012200\|Ga0137382_11109074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300012202\|Ga0137363_10013861	All Organisms → cellular organisms → Bacteria	5242	Open in IMG/M
3300012202\|Ga0137363_11103468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300012203\|Ga0137399_10286675	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300012203\|Ga0137399_10333361	All Organisms → cellular organisms → Bacteria → Acidobacteria	1258	Open in IMG/M
3300012203\|Ga0137399_10512379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300012203\|Ga0137399_10565893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300012205\|Ga0137362_10127496	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300012205\|Ga0137362_10499473	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300012205\|Ga0137362_10642537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300012205\|Ga0137362_11401394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300012361\|Ga0137360_10002683	All Organisms → cellular organisms → Bacteria → Proteobacteria	10655	Open in IMG/M
3300012361\|Ga0137360_10515226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300012361\|Ga0137360_10519145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300012361\|Ga0137360_10571503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300012361\|Ga0137360_11621000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300012362\|Ga0137361_10059302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3193	Open in IMG/M
3300012362\|Ga0137361_10223944	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300012362\|Ga0137361_10906955	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300012363\|Ga0137390_10261867	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300012582\|Ga0137358_10796952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300012683\|Ga0137398_10349848	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300012683\|Ga0137398_10398497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300012917\|Ga0137395_10552177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300012917\|Ga0137395_10768797	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300012918\|Ga0137396_10448115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300012918\|Ga0137396_10471239	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300012918\|Ga0137396_10508167	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300012922\|Ga0137394_11417317	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012923\|Ga0137359_10177239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1903	Open in IMG/M
3300012925\|Ga0137419_10620546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300012925\|Ga0137419_10624395	Not Available	868	Open in IMG/M
3300012925\|Ga0137419_11051713	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300012925\|Ga0137419_11889969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300012927\|Ga0137416_10076306	All Organisms → cellular organisms → Bacteria → Acidobacteria	2449	Open in IMG/M
3300012927\|Ga0137416_10791889	Not Available	838	Open in IMG/M
3300012927\|Ga0137416_11024527	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300015051\|Ga0137414_1064460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300015052\|Ga0137411_1333006	All Organisms → cellular organisms → Bacteria → Acidobacteria	1494	Open in IMG/M
3300015054\|Ga0137420_1109759	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300015054\|Ga0137420_1357532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300015241\|Ga0137418_10238820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1549	Open in IMG/M
3300015242\|Ga0137412_10027977	All Organisms → cellular organisms → Bacteria	4602	Open in IMG/M
3300015245\|Ga0137409_10000906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	32531	Open in IMG/M
3300015245\|Ga0137409_10004020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15548	Open in IMG/M
3300015245\|Ga0137409_10116570	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300020140\|Ga0179590_1206472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300020170\|Ga0179594_10335299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300020199\|Ga0179592_10283037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300020579\|Ga0210407_10122161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1993	Open in IMG/M
3300020579\|Ga0210407_10653291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300020579\|Ga0210407_10716512	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300020579\|Ga0210407_10734591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300020580\|Ga0210403_10109570	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300020581\|Ga0210399_10420527	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300021168\|Ga0210406_10964827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300021170\|Ga0210400_10323549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300021171\|Ga0210405_10829297	Not Available	707	Open in IMG/M
3300021403\|Ga0210397_11538355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300021405\|Ga0210387_10114701	All Organisms → cellular organisms → Bacteria	2269	Open in IMG/M
3300021420\|Ga0210394_10922288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300021420\|Ga0210394_11405898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300021432\|Ga0210384_10301596	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300021478\|Ga0210402_10158588	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300021479\|Ga0210410_10264372	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300021479\|Ga0210410_10358731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1307	Open in IMG/M
3300021559\|Ga0210409_11176457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300025899\|Ga0207642_10485196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300025905\|Ga0207685_10411951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300025928\|Ga0207700_11659227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300025929\|Ga0207664_11562994	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300025939\|Ga0207665_10922790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300025939\|Ga0207665_11259254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300026320\|Ga0209131_1151656	Not Available	1170	Open in IMG/M
3300026490\|Ga0257153_1018326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1426	Open in IMG/M
3300026532\|Ga0209160_1138252	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300026551\|Ga0209648_10843540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300026552\|Ga0209577_10145615	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300027061\|Ga0209729_1050593	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027381\|Ga0208983_1070362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300027439\|Ga0209332_1025756	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300027610\|Ga0209528_1147314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300027635\|Ga0209625_1135639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300027903\|Ga0209488_10080765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2419	Open in IMG/M
3300027903\|Ga0209488_10281724	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300028047\|Ga0209526_10000672	All Organisms → cellular organisms → Bacteria → Proteobacteria	22420	Open in IMG/M
3300028047\|Ga0209526_10430232	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300028536\|Ga0137415_10022136	All Organisms → cellular organisms → Bacteria → Acidobacteria	6287	Open in IMG/M
3300028536\|Ga0137415_10067090	All Organisms → cellular organisms → Bacteria	3453	Open in IMG/M
3300028536\|Ga0137415_10092552	All Organisms → cellular organisms → Bacteria → Acidobacteria	2878	Open in IMG/M
3300028536\|Ga0137415_10150656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2162	Open in IMG/M
3300031057\|Ga0170834_111475455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300031122\|Ga0170822_15486663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	823	Open in IMG/M
3300031718\|Ga0307474_11643161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300031823\|Ga0307478_11200693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300031962\|Ga0307479_10270687	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300031962\|Ga0307479_10461404	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300032174\|Ga0307470_11177744	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300032180\|Ga0307471_102962226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.54%
Host-Associated	Host-Associated	1.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.54%
Plants	Host-Associated → Plants	1.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.10%
Loam	Environmental → Terrestrial → Soil → Loam	20.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.46%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001145	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_122706032	3300000789	Soil	LGAGAAQASASMAIGFGYFGAAKRICDAFIAKGSNVDLPLNTPIWLRFDSNDQTVAREIP
JGI12682J13319_10174871	3300001145	Forest Soil	FGLLGAGAAQASAGTAIGFGYFGAAKKLYSAFIAKGSNVELPAYTPIVLRLESSDPSVAVATP*
JGIcombinedJ26739_1003159692	3300002245	Forest Soil	QASAGTAIGFGYFGAAKKLYSAFIAKGSSVELPAYTPIALRLDSSEPSLAVATP*
JGIcombinedJ26739_1004035514	3300002245	Forest Soil	FGAAKRLCDAFITKGSNVELPVNTPIFLRLDSGDPWVALTTR*
JGI25613J43889_100107301	3300002907	Grasslands Soil	YFGAAKRLCDAFITKGSNVELPVHTPILVRLDSDDPTVARATP*
JGI25617J43924_100760152	3300002914	Grasslands Soil	AKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
JGI25617J43924_100801803	3300002914	Grasslands Soil	ASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
JGI25616J43925_102357892	3300002917	Grasslands Soil	GYFGAAKRLCDAFITKGSNVELPVHTPIFLRLDSSDPSVARATP*
Ga0066672_106125831	3300005167	Soil	FGAAKRLCDAFITKGSSVELPVNTPIFLRLDSSDPSVALATR*
Ga0070714_1022928052	3300005435	Agricultural Soil	IGFGYFGAAKRFCDAFITKGANVELPVNTPIVLRLDSDDPAVALATR*
Ga0070713_1016888241	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GTAIGFGYFGAAKRFCDAFITKGANVELPVNTPIVLRLDSDDPAVALATR*
Ga0070710_114103442	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SAGTAIGFGYFGAAKRFCDAFITKGANVELPVNTPIVLRLDSDDPAVALATR*
Ga0070711_1003724201	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LGAGAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVDTPIFLRLDSSNTSVALTTR
Ga0070706_1008856693	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	FGAAKRLCDAFITKGSNVELPVNTPIVLRLDSDATSAALATR*
Ga0070698_1008750552	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ASAGTAIGFGYFGAAKRLCDAFITKGSNVELPLNTPIFLRLDSNDPSLALATR*
Ga0070697_1005494491	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GAAKRLCDAFITKGSNVELPVNTPIFLRLNSNDPSVAQAAR*
Ga0070697_1007350151	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPLNTPIFLRLDSNDPSLALATR*
Ga0066703_103568733	3300005568	Soil	LGAGAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSSDPSVALATR
Ga0066691_105821542	3300005586	Soil	LCDAFITKGSNVELPVNTPIFLRLDSSDPSVALATR*
Ga0070763_108377021	3300005610	Soil	TAIGFGYFGAAKKLCDAFITKGSNVELPVNTPIVLRLDSDAPSVALATR*
Ga0068866_114690291	3300005718	Miscanthus Rhizosphere	GLLGAGAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSSDPSVALTTR*
Ga0070717_105691231	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TAIGFGYFGAAKRLCDAFITKGSNVELPVNTPILLRLDFNDPSVARATQ*
Ga0070715_105535071	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	YFGAAKRFCDAFITKGANVELPVNTPIVLRLDSDDPAVALATR*
Ga0070716_1014094241	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIALRLDSEDPAVALATR*
Ga0070765_1020378811	3300006176	Soil	AIGFGYFGAAKRLCDAFITKGSNVELPVNTPIALRLDSDDPSVALATR*
Ga0099791_100879392	3300007255	Vadose Zone Soil	GAGAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
Ga0099794_100174991	3300007265	Vadose Zone Soil	DAFIAKGSNVELPVNTPIFLRLDSDDPSVALATR*
Ga0099794_104747572	3300007265	Vadose Zone Soil	FGYLGAAKRLCDAFIAKGSNVELPVNTPIFLRLDSNDPSVALATP*
Ga0099829_106701921	3300009038	Vadose Zone Soil	QASAGTAIGFGYFGAAKRLCDAFITKGSNVELPLNTPIFLRLDSNDPSVALATR*
Ga0099792_104867231	3300009143	Vadose Zone Soil	QASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
Ga0099796_102405922	3300010159	Vadose Zone Soil	GAAKRLCDAFITKGSNVELPVNTPILLRLDSDDPSVALATR*
Ga0134123_109456961	3300010403	Terrestrial Soil	GLLGAGAAQASAGAAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSSDPSVALTTR*
Ga0137392_108081722	3300011269	Vadose Zone Soil	GAAQASAGTAIGFGYFGAAKKLCDAFLTKGSNVELPAHTPIFLRLDSNNPTLAFATP*
Ga0137392_115261852	3300011269	Vadose Zone Soil	GLLGAGAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
Ga0137391_104150341	3300011270	Vadose Zone Soil	QASVGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPILLRLDFNDPSVARATL*
Ga0137393_100669552	3300011271	Vadose Zone Soil	RLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
Ga0137393_101618842	3300011271	Vadose Zone Soil	FGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALVTQ*
Ga0137389_100274974	3300012096	Vadose Zone Soil	FGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
Ga0137382_111090741	3300012200	Vadose Zone Soil	GAGAAQASVGTAIGFGYFGAAKGLCNAFITKGSNVELPVNTPIFLRLDSGDPSVALATR*
Ga0137363_100138616	3300012202	Vadose Zone Soil	AAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPAVALATR*
Ga0137363_111034682	3300012202	Vadose Zone Soil	GFGYFGAAKGLCNAFITKGSNVELPANTPIFLRLDSGDPSVALATR*
Ga0137399_102866753	3300012203	Vadose Zone Soil	YFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNNPSVALATR*
Ga0137399_103333611	3300012203	Vadose Zone Soil	TAIGFGYFGAAKRLCDAFITKGSNVELPVNTPILLRLDSDDPSIALAAR*
Ga0137399_105123791	3300012203	Vadose Zone Soil	RLCDAFITKGSNVELPVNTPIFLRLDSNDPTVALVTR*
Ga0137399_105658931	3300012203	Vadose Zone Soil	IGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALVTR*
Ga0137362_101274963	3300012205	Vadose Zone Soil	AGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFVRLDSIDPMLSLETR*
Ga0137362_104994733	3300012205	Vadose Zone Soil	FGLLGAGAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSSDPSVALATR*
Ga0137362_106425372	3300012205	Vadose Zone Soil	GAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIVLRLDSDATSVALATR*
Ga0137362_114013941	3300012205	Vadose Zone Soil	GTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPTVALETR*
Ga0137360_100026839	3300012361	Vadose Zone Soil	AQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFVRLDSIDPMVSLETR*
Ga0137360_105152262	3300012361	Vadose Zone Soil	GYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPTVALETR*
Ga0137360_105191451	3300012361	Vadose Zone Soil	AIGFGYFGAAKRLCDAFITKGSNVELPVHTPILVRLDSDDPTVARATP*
Ga0137360_105715032	3300012361	Vadose Zone Soil	GLLGAGAAQASVGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPILLRLDPDDPAVALATR*
Ga0137360_116210001	3300012361	Vadose Zone Soil	GYFGAAKGLCNAFITKGSNVELPANTPIFLRLDSGDPSVALATR*
Ga0137361_100593022	3300012362	Vadose Zone Soil	AGAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLHLDSNDPTVALETR*
Ga0137361_102239442	3300012362	Vadose Zone Soil	AGAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNAPSVALATR*
Ga0137361_109069551	3300012362	Vadose Zone Soil	RLCDAFITKGSNVELPVNTPIFLRLDSNDPAVALATR*
Ga0137390_102618671	3300012363	Vadose Zone Soil	FGAAKRLCDAFITKGSNVELPVNTPILLRLDFNDPSVARATL*
Ga0137358_107969522	3300012582	Vadose Zone Soil	GTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPAVALATR*
Ga0137398_103498481	3300012683	Vadose Zone Soil	YFGAAKRLCDAFITKGSNVELPVNTPILLRLDPDDPSVALATR*
Ga0137398_103984971	3300012683	Vadose Zone Soil	GFGYFGAAKRLCDAFITKGSNVELPVNTPILLRLDSDDPSVALATR*
Ga0137395_105521772	3300012917	Vadose Zone Soil	LCDAFITNGSNVELPVNPPVFLRLDSNDPSVALATR*
Ga0137395_107687973	3300012917	Vadose Zone Soil	TAIGFGYFGAAKRLCDAFITKGSNVELPVNTPISLRLDSNDPSVALATR*
Ga0137396_104481152	3300012918	Vadose Zone Soil	AGTAIGFGYFGAAKRLCEAFITKGSNVELPVNTPIFLHLDSNDPTVALETR*
Ga0137396_104712392	3300012918	Vadose Zone Soil	AQASAGTAIGFGYFGAAKRLCDAFIAKGSNVELPVNTPIFLRLDSNDPSVALATR*
Ga0137396_105081672	3300012918	Vadose Zone Soil	CDAFITKGSNVELPVNTPIFLRLDSNDPTVALETR*
Ga0137394_114173172	3300012922	Vadose Zone Soil	AGAAQASVGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPILLRLDPDDPSVALATR*
Ga0137359_101772394	3300012923	Vadose Zone Soil	AGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
Ga0137419_106205461	3300012925	Vadose Zone Soil	LGAGPAQASAGTVIGFGYLGAAQRLCDALITKGSNVELPVNTPIFLRLDSNDPAAALATR
Ga0137419_106243952	3300012925	Vadose Zone Soil	GLLGAGAAQASAGTAIGFGYFGAARRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
Ga0137419_110517131	3300012925	Vadose Zone Soil	IGFGYLGAAKRLCDAFITKGSNVELPVNTPILLRLDSDDPSVALATR*
Ga0137419_118899692	3300012925	Vadose Zone Soil	GFGLLGAGAAQASVGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPILLRLDPDDPALALATR*
Ga0137416_100763061	3300012927	Vadose Zone Soil	TAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR*
Ga0137416_107918891	3300012927	Vadose Zone Soil	FGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPR*
Ga0137416_110245272	3300012927	Vadose Zone Soil	AGAAQASVGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPILLRLDPDDPAVALATR*
Ga0137414_10644601	3300015051	Vadose Zone Soil	KRLCDAFITKGSNVELPVNTPILLRLDSDDPSVALVATR*
Ga0137411_13330061	3300015052	Vadose Zone Soil	LGAGAAQASVGTAIGFGYFGAAKRLCNAFVTKGSNVELPVNTPILLRLDSDDSSVALATR
Ga0137420_11097591	3300015054	Vadose Zone Soil	GYFGAAKRLCDVFVTKGSNVELPVNTPILLRLDSDDSSVALATR*
Ga0137420_13575321	3300015054	Vadose Zone Soil	AAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIVLRLDSDATSAALATR*
Ga0137418_102388203	3300015241	Vadose Zone Soil	TAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPTVALVTR*
Ga0137412_100279775	3300015242	Vadose Zone Soil	GLLGAGAAQASGGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPISLRLDSSDPSVALATR*
Ga0137409_100009061	3300015245	Vadose Zone Soil	GAAARICDAFIAKGSNVDLPANTPIFLRLDSSDPSVALATR*
Ga0137409_100040201	3300015245	Vadose Zone Soil	YFGAAKRLCDAFITKGSNVELPVNTPIFLQLDSNDSTVALETR*
Ga0137409_101165701	3300015245	Vadose Zone Soil	YFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPTVALETR*
Ga0179590_12064721	3300020140	Vadose Zone Soil	GAGAAQASAGTAIGFGYFGAARRLCDAFLTKGANVELPVNTPIFLRLDSDDPAVALAAQ
Ga0179594_103352992	3300020170	Vadose Zone Soil	AGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPTVALETR
Ga0179592_102830371	3300020199	Vadose Zone Soil	FGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPTVALVTR
Ga0210407_101221613	3300020579	Soil	AIGFGYFGAAKRLCDAFITKGSNVELPVNTPIVLRLDSDAIPVALATR
Ga0210407_106532911	3300020579	Soil	GAAQASASTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNESSVASAAR
Ga0210407_107165121	3300020579	Soil	AAQASATTAIGFGYFGAAKKLCDAFITKGSNVELLVNTPIVLRLDSDAPSVALATR
Ga0210407_107345912	3300020579	Soil	SVGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPAVALATR
Ga0210403_101095701	3300020580	Soil	GFGLLGAGAAQASVGTAIGFGYFGAAKRLCNAFITKGSNVELPAHTPIFLRLDSNDSSLAVATR
Ga0210399_104205272	3300020581	Soil	GTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSDDSSVALAAR
Ga0210406_109648271	3300021168	Soil	GLLGAGAAQASASTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPILLRLDDASVARATL
Ga0210400_103235493	3300021170	Soil	GFGLVGAGAAQASAATAIGFGYFGAAKRLCDAFITKGSNVELPVHTPILVRLDSDDPSVARATP
Ga0210405_108292971	3300021171	Soil	RLCDAFITKGSNVELPVHTPILVRLDSDDPTVALETR
Ga0210397_115383551	3300021403	Soil	TAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIALRLDSNDPSVALATR
Ga0210387_101147011	3300021405	Soil	RKGFGLLGAGAAQASVGTAIGFGYFGAAKRLCNAFITKGSNVELPAHTPIFLRLDSNDSSLAVATR
Ga0210394_109222881	3300021420	Soil	TAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSDDPSVALASP
Ga0210394_114058981	3300021420	Soil	IGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSAALATR
Ga0210384_103015962	3300021432	Soil	VGTSIGFGYFGAAKRLCSAFITKGSNVELPVNTPIFLRMDSSDRSLALAAQ
Ga0210402_101585881	3300021478	Soil	AGAAQASVGTAIGFGYFGAAKKLCNAFLTKGSNVELPTHTPIFLRLDSNNPTLALATP
Ga0210410_102643723	3300021479	Soil	AGAAQASASTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIALRLDSNDPSVALATR
Ga0210410_103587311	3300021479	Soil	FGAAKRICDAFITKGSNVELPVHTPIFLRMDSNDPSLARATP
Ga0210409_111764571	3300021559	Soil	AAQASAGAAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSAALATR
Ga0207642_104851961	3300025899	Miscanthus Rhizosphere	GYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSSDPSVALTTR
Ga0207685_104119511	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	QASAGTAIGFGYFGAAKRFCDAFITKGANVELPVNTPIVLRLDSDDPAVALATR
Ga0207700_116592271	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GTAIGFGYFGAAKRFCDAFITKGANVELPVNTPIVLRLDSDDPAVALATR
Ga0207664_115629942	3300025929	Agricultural Soil	AGAAQASASTAIGFGYFGAAKKLCDAFITRGSNVELPVNTPIVLRLDSDAIPVALVTP
Ga0207665_109227901	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSSDPSVALTTR
Ga0207665_112592541	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	SLLGAGAAQASASTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIALRLDSEDPAVALATR
Ga0209131_11516561	3300026320	Grasslands Soil	FGLLGAGAAQASVGTAIGFGYFGAAKRLCNAFLTKGSNVELPAHTPIFLRLDSNNPTLALATP
Ga0257153_10183261	3300026490	Soil	AAQASASTAIGFGYFGAAKTLYDAFITKGSNVELPVNTPIVLRLDSDATSVALATR
Ga0209160_11382521	3300026532	Soil	GLLGAGAAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSSDPSVALATR
Ga0209648_108435401	3300026551	Grasslands Soil	GLLGAGAAQASAGTAIGFGYFGAEKRLCDAFITKGSNVELPVNTPIFLRLDSDDPSVALATR
Ga0209577_101456152	3300026552	Soil	FGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR
Ga0209729_10505931	3300027061	Forest Soil	GAGAAQASVSTSIGLGYFGAAKRLCSAFITKGSNVELPVNTPIFLRMDSSDRSVALAAQ
Ga0208983_10703621	3300027381	Forest Soil	AIGFGYFGAARRLCDAFITKGSNVELPVHTPIFLRLDSSDPSVALATR
Ga0209332_10257562	3300027439	Forest Soil	AAQASAGTAIGFGYFGAAKKLYSAFIAKGSSVELPAYTPIVLRLNSSDTSAAMATP
Ga0209528_11473141	3300027610	Forest Soil	ASASTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIALRLESDDPSVALATR
Ga0209625_11356391	3300027635	Forest Soil	AAIGFGYFGAAKRIYDAFVAKGSNVDLPLNTPISLRIDSNDPTVAREIP
Ga0209488_100807651	3300027903	Vadose Zone Soil	AKRLCDAFITKGSNVELPVNTPILLRLDPDDPSVALATR
Ga0209488_102817241	3300027903	Vadose Zone Soil	AAKRLCDAFITKGSNVELPVNTPILLRLDPDDPSVALATR
Ga0209526_1000067220	3300028047	Forest Soil	NGFGLLGAGAAQASAGTAIGFGYFGAAKKLYSAFIAKGSDVELPAYTPIFLRLDSSDPSAAFATR
Ga0209526_104302321	3300028047	Forest Soil	ASAGTAIGFGYFGAAKKLYSAFIAKGSSVELPAYTPIALRLDSSEPSLAVATP
Ga0137415_100221361	3300028536	Vadose Zone Soil	AAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLHLDSNDPTVALETR
Ga0137415_100670905	3300028536	Vadose Zone Soil	AAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPANTPFFLRLDSNDSSVALGTR
Ga0137415_100925525	3300028536	Vadose Zone Soil	LGAGAAQASVGTAIGFGYFGAAKRLCDAFITKGSNVELPVHTPILVRLDSDDPTVARATP
Ga0137415_101506563	3300028536	Vadose Zone Soil	AAQASAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDSNDPSVALATR
Ga0170834_1114754552	3300031057	Forest Soil	GLLGAGAAQASASTAIGFGYFGAAKRLYDSFITKGSNVDLPLNTPISLRIDSNDPTVAREIP
Ga0170822_154866631	3300031122	Forest Soil	GYFGAAKKLCDAFITKGSNVDLPLDTPISLRIDSNDPTVAREIP
Ga0307474_116431611	3300031718	Hardwood Forest Soil	FGYFGAAVRLCDAFITKGSNVELPVNTPLFLRLDPDATSTALAAR
Ga0307478_112006932	3300031823	Hardwood Forest Soil	ASAGTAIGFGYFGAAKRICDAFITKGSNVELPVNTPILVRLDSEDTSIASATR
Ga0307479_102706873	3300031962	Hardwood Forest Soil	LGAGAAQASASTAIGFGYFGAAKRLCDAFITKGANVELPVNTPISLRLDSNDSTVALATR
Ga0307479_104614041	3300031962	Hardwood Forest Soil	SAGTAIGFGYFGAAKRLCDAFITKGSNVELPVNTPIVLRMDSDDPSVAVATR
Ga0307470_111777441	3300032174	Hardwood Forest Soil	ASVGTAIGFGYFGAAKRLYNAFLTKGSNVELPAYTPISLRLDSSNSTVAVAGR
Ga0307471_1029622261	3300032180	Hardwood Forest Soil	SAATAVGFGYFGAAKRLCDAFITKGSNVELPVNTPIFLRLDFNDPSVALATR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056930

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences