Metagenome Family F056889

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056889
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	41 residues
Representative Sequence	MKNLSHEEQITLILIGIAIGIGIGFVLKTFVDTYYLVGSLP
Number of Associated Samples	105
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.66 %
% of genes near scaffold ends (potentially truncated)	16.79 %
% of genes from short scaffolds (< 2000 bps)	89.78 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (45.985 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (44.526 % of family members)
Environment Ontology (ENVO)	Unclassified (84.672 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.080 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.83% β-sheet: 0.00% Coil/Unstructured: 52.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF01521	Fe-S_biosyn	11.68
PF00578	AhpC-TSA	5.84
PF02412	TSP_3	4.38
PF03851	UvdE	3.65
PF08534	Redoxin	2.19
PF03819	MazG	1.46
PF02562	PhoH	0.73
PF00085	Thioredoxin	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	11.68
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	11.68
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	3.65
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.73
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.59 %
Unclassified	root	N/A	12.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.55 %
Viruses	superkingdom	All Organisms → Viruses	35.04 %
Unclassified	root	N/A	12.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.04 %
Unclassified	root	N/A	12.41 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	6.57 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.04 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	29.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.14 %
Unclassified	root	N/A	12.41 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	6.57 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.73 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.04 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	29.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.41 %
Unclassified	root	N/A	12.41 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	6.57 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.04 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	29.20 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	12.41 %
Unclassified	root	N/A	12.41 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	6.57 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.04 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	29.20 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	12.41 %
Unclassified	root	N/A	12.41 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	6.57 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.04 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	29.20 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	12.41 %
Unclassified	root	N/A	12.41 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	6.57 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.04 %
bacterium TMED198	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	29.20 %
Rhodospirillaceae bacterium TMED8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	12.41 %
Unclassified	root	N/A	12.41 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	6.57 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10064752	All Organisms → Viruses → Predicted Viral	1353	Open in IMG/M
3300000115\|DelMOSum2011_c10072134	All Organisms → Viruses → Predicted Viral	1239	Open in IMG/M
3300000117\|DelMOWin2010_c10011320	All Organisms → cellular organisms → Bacteria	5014	Open in IMG/M
3300000168\|LPjun09P1210mDRAFT_c1004852	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1190	Open in IMG/M
3300001450\|JGI24006J15134_10043488	All Organisms → Viruses → Predicted Viral	1885	Open in IMG/M
3300002483\|JGI25132J35274_1008896	All Organisms → Viruses → Predicted Viral	2494	Open in IMG/M
3300002488\|JGI25128J35275_1040369	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1045	Open in IMG/M
3300002514\|JGI25133J35611_10137195	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	683	Open in IMG/M
3300005057\|Ga0068511_1106474	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	503	Open in IMG/M
3300005430\|Ga0066849_10084015	All Organisms → Viruses → Predicted Viral	1270	Open in IMG/M
3300005430\|Ga0066849_10130977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	991	Open in IMG/M
3300005430\|Ga0066849_10407113	Not Available	512	Open in IMG/M
3300005523\|Ga0066865_10052148	All Organisms → Viruses → Predicted Viral	1422	Open in IMG/M
3300005934\|Ga0066377_10020758	All Organisms → Viruses → Predicted Viral	1755	Open in IMG/M
3300006166\|Ga0066836_10212366	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1150	Open in IMG/M
3300006190\|Ga0075446_10051937	All Organisms → Viruses → Predicted Viral	1268	Open in IMG/M
3300006565\|Ga0100228_1185293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	764	Open in IMG/M
3300006735\|Ga0098038_1027384	All Organisms → Viruses → Predicted Viral	2140	Open in IMG/M
3300006735\|Ga0098038_1147161	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	787	Open in IMG/M
3300006735\|Ga0098038_1254512	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	554	Open in IMG/M
3300006737\|Ga0098037_1080342	All Organisms → Viruses → Predicted Viral	1145	Open in IMG/M
3300006738\|Ga0098035_1142962	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	816	Open in IMG/M
3300006749\|Ga0098042_1051382	All Organisms → Viruses → Predicted Viral	1117	Open in IMG/M
3300006751\|Ga0098040_1029674	All Organisms → Viruses → Predicted Viral	1749	Open in IMG/M
3300006752\|Ga0098048_1232394	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	541	Open in IMG/M
3300006753\|Ga0098039_1014336	All Organisms → Viruses → Predicted Viral	2883	Open in IMG/M
3300006754\|Ga0098044_1117826	All Organisms → Viruses → Predicted Viral	1080	Open in IMG/M
3300006754\|Ga0098044_1183729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	828	Open in IMG/M
3300006754\|Ga0098044_1193797	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	801	Open in IMG/M
3300006789\|Ga0098054_1111500	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300006789\|Ga0098054_1167325	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	808	Open in IMG/M
3300006789\|Ga0098054_1325936	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006793\|Ga0098055_1111929	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1062	Open in IMG/M
3300006802\|Ga0070749_10385174	Not Available	775	Open in IMG/M
3300006868\|Ga0075481_10347455	Not Available	513	Open in IMG/M
3300006916\|Ga0070750_10278166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	720	Open in IMG/M
3300006922\|Ga0098045_1010377	All Organisms → Viruses → Predicted Viral	2651	Open in IMG/M
3300006923\|Ga0098053_1033385	All Organisms → Viruses → Predicted Viral	1089	Open in IMG/M
3300006929\|Ga0098036_1064734	All Organisms → Viruses → Predicted Viral	1129	Open in IMG/M
3300006929\|Ga0098036_1110963	Not Available	842	Open in IMG/M
3300006929\|Ga0098036_1282784	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	500	Open in IMG/M
3300007543\|Ga0102853_1081954	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	592	Open in IMG/M
3300007963\|Ga0110931_1206609	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	586	Open in IMG/M
3300008050\|Ga0098052_1331901	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	571	Open in IMG/M
3300009071\|Ga0115566_10071240	All Organisms → Viruses → Predicted Viral	2295	Open in IMG/M
3300009172\|Ga0114995_10553131	Not Available	629	Open in IMG/M
3300009418\|Ga0114908_1176326	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	674	Open in IMG/M
3300009420\|Ga0114994_10104380	All Organisms → Viruses → Predicted Viral	1928	Open in IMG/M
3300009428\|Ga0114915_1107422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	824	Open in IMG/M
3300009481\|Ga0114932_10755057	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	565	Open in IMG/M
3300009550\|Ga0115013_10881183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	626	Open in IMG/M
3300009593\|Ga0115011_10118958	All Organisms → Viruses → Predicted Viral	1887	Open in IMG/M
3300009593\|Ga0115011_11422437	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	609	Open in IMG/M
3300009790\|Ga0115012_10844144	Not Available	745	Open in IMG/M
3300009790\|Ga0115012_11632421	Not Available	559	Open in IMG/M
3300010151\|Ga0098061_1053017	All Organisms → Viruses → Predicted Viral	1575	Open in IMG/M
3300011252\|Ga0151674_1083467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	602	Open in IMG/M
3300012920\|Ga0160423_10648960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	714	Open in IMG/M
3300012928\|Ga0163110_10230120	All Organisms → Viruses → Predicted Viral	1327	Open in IMG/M
3300012928\|Ga0163110_10296698	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1181	Open in IMG/M
3300012954\|Ga0163111_11133044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	761	Open in IMG/M
3300017702\|Ga0181374_1064544	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300017705\|Ga0181372_1021761	All Organisms → Viruses → Predicted Viral	1096	Open in IMG/M
3300017705\|Ga0181372_1031087	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	904	Open in IMG/M
3300017706\|Ga0181377_1073053	Not Available	621	Open in IMG/M
3300017708\|Ga0181369_1060600	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	832	Open in IMG/M
3300017709\|Ga0181387_1010567	All Organisms → Viruses → Predicted Viral	1787	Open in IMG/M
3300017709\|Ga0181387_1033420	All Organisms → Viruses → Predicted Viral	1011	Open in IMG/M
3300017729\|Ga0181396_1118016	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	546	Open in IMG/M
3300017731\|Ga0181416_1108524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	663	Open in IMG/M
3300017741\|Ga0181421_1074814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	888	Open in IMG/M
3300017757\|Ga0181420_1031349	All Organisms → Viruses → Predicted Viral	1745	Open in IMG/M
3300017757\|Ga0181420_1034097	All Organisms → Viruses → Predicted Viral	1664	Open in IMG/M
3300017757\|Ga0181420_1156927	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	676	Open in IMG/M
3300017770\|Ga0187217_1215413	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	633	Open in IMG/M
3300017772\|Ga0181430_1097018	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	880	Open in IMG/M
3300017775\|Ga0181432_1017401	All Organisms → Viruses → Predicted Viral	1826	Open in IMG/M
3300017775\|Ga0181432_1025541	All Organisms → Viruses → Predicted Viral	1555	Open in IMG/M
3300017775\|Ga0181432_1034606	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1368	Open in IMG/M
3300017775\|Ga0181432_1057805	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1097	Open in IMG/M
3300017775\|Ga0181432_1089354	Not Available	908	Open in IMG/M
3300017775\|Ga0181432_1101672	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	856	Open in IMG/M
3300017775\|Ga0181432_1126749	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	774	Open in IMG/M
3300017775\|Ga0181432_1156016	Not Available	703	Open in IMG/M
3300017775\|Ga0181432_1216685	Not Available	601	Open in IMG/M
3300017775\|Ga0181432_1271951	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	536	Open in IMG/M
3300017775\|Ga0181432_1288137	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	520	Open in IMG/M
3300017775\|Ga0181432_1295800	Not Available	513	Open in IMG/M
3300017952\|Ga0181583_10647715	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	632	Open in IMG/M
3300017962\|Ga0181581_10667923	Not Available	627	Open in IMG/M
3300020165\|Ga0206125_10013580	Not Available	5416	Open in IMG/M
3300020169\|Ga0206127_1032694	All Organisms → Viruses → Predicted Viral	2951	Open in IMG/M
3300020247\|Ga0211654_1001426	All Organisms → Viruses → Predicted Viral	4350	Open in IMG/M
3300020312\|Ga0211542_1013457	All Organisms → Viruses → Predicted Viral	1868	Open in IMG/M
3300020347\|Ga0211504_1062992	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	866	Open in IMG/M
3300020377\|Ga0211647_10098989	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1004	Open in IMG/M
3300020378\|Ga0211527_10043368	All Organisms → Viruses → Predicted Viral	1432	Open in IMG/M
3300020379\|Ga0211652_10058394	All Organisms → Viruses → Predicted Viral	1157	Open in IMG/M
3300020404\|Ga0211659_10089253	All Organisms → Viruses → Predicted Viral	1429	Open in IMG/M
3300020405\|Ga0211496_10079516	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1187	Open in IMG/M
3300020408\|Ga0211651_10071309	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1482	Open in IMG/M
3300020414\|Ga0211523_10073778	All Organisms → Viruses → Predicted Viral	1452	Open in IMG/M
3300020421\|Ga0211653_10069881	All Organisms → Viruses → Predicted Viral	1574	Open in IMG/M
3300020436\|Ga0211708_10217165	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	770	Open in IMG/M
3300020445\|Ga0211564_10387148	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	687	Open in IMG/M
3300020449\|Ga0211642_10510893	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	515	Open in IMG/M
3300020451\|Ga0211473_10101985	All Organisms → Viruses → Predicted Viral	1466	Open in IMG/M
3300020457\|Ga0211643_10235607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	899	Open in IMG/M
3300020462\|Ga0211546_10492066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	618	Open in IMG/M
3300020462\|Ga0211546_10574593	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	568	Open in IMG/M
3300020470\|Ga0211543_10610908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	511	Open in IMG/M
3300020474\|Ga0211547_10344031	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	754	Open in IMG/M
3300021368\|Ga0213860_10424207	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	574	Open in IMG/M
3300021375\|Ga0213869_10292648	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	697	Open in IMG/M
3300024346\|Ga0244775_10099744	All Organisms → Viruses → Predicted Viral	2470	Open in IMG/M
3300025071\|Ga0207896_1068422	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	556	Open in IMG/M
3300025084\|Ga0208298_1074948	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	634	Open in IMG/M
3300025096\|Ga0208011_1018100	All Organisms → Viruses → Predicted Viral	1841	Open in IMG/M
3300025097\|Ga0208010_1129414	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	503	Open in IMG/M
3300025112\|Ga0209349_1072456	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	1027	Open in IMG/M
3300025132\|Ga0209232_1028691	All Organisms → Viruses → Predicted Viral	2140	Open in IMG/M
3300025133\|Ga0208299_1078711	All Organisms → Viruses → Predicted Viral	1163	Open in IMG/M
3300025133\|Ga0208299_1104146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	954	Open in IMG/M
3300025151\|Ga0209645_1024845	All Organisms → Viruses → Predicted Viral	2250	Open in IMG/M
3300025751\|Ga0208150_1039440	Not Available	1634	Open in IMG/M
3300026257\|Ga0208407_1113310	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	847	Open in IMG/M
3300026257\|Ga0208407_1127577	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED198	786	Open in IMG/M
3300026260\|Ga0208408_1117523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	771	Open in IMG/M
3300026321\|Ga0208764_10093027	All Organisms → Viruses → Predicted Viral	1565	Open in IMG/M
3300027779\|Ga0209709_10207307	Not Available	906	Open in IMG/M
3300027859\|Ga0209503_10058475	Not Available	1767	Open in IMG/M
3300028192\|Ga0257107_1097989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	877	Open in IMG/M
3300029319\|Ga0183748_1012595	All Organisms → Viruses → Predicted Viral	3390	Open in IMG/M
3300029448\|Ga0183755_1006384	All Organisms → cellular organisms → Bacteria	5266	Open in IMG/M
3300031851\|Ga0315320_10628624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium TMED8	701	Open in IMG/M
3300032032\|Ga0315327_10170866	All Organisms → Viruses → Predicted Viral	1360	Open in IMG/M
3300032073\|Ga0315315_10199772	All Organisms → Viruses → Predicted Viral	1866	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	51.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.52%
Strait	Environmental → Aquatic → Marine → Strait	16.06%
Coastal	Environmental → Aquatic → Marine → Coastal	5.11%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.38%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.19%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.19%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	47.45%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.52%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	16.06%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.11%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.38%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.19%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.46%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.73%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	44.53%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	16.79%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	16.06%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.92%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.92%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.19%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.19%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.46%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.46%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.46%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.73%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	0.73%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.73%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.73%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.73%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.73%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000168	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 10m	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007543	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300011252	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeate	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020247	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556048-ERR598962)	Environmental	Open in IMG/M
3300020312	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020378	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020408	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025084	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental	Open in IMG/M
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_100647525	3300000115	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKAFLDTYYLLQNL*
DelMOSum2011_100721345	3300000115	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKVFVDSYIIIERLPL*
DelMOWin2010_100113207	3300000117	Marine	MKNLSNEEQITLILIGIAIGIGLGFLIKVFIDTHILLQNF*
LPjun09P1210mDRAFT_10048524	3300000168	Marine	MKNLSHEEQITLILIGIAIGVGIGFVLKVFVDSYIII
JGI24006J15134_100434882	3300001450	Marine	MKNLSSEEQITLILIGIAIGVAIGFVLKTFVDTYYLLGSLP*
JGI25132J35274_10088963	3300002483	Marine	MKNLSNEEQITLILIGIAIGXGXGFLIKVFIXTHILLQNI*
JGI25128J35275_10403694	3300002488	Marine	MKNLSNEEQITLILIGIAIGIGVGFLIKVFIDTHILLQNF*
JGI25133J35611_101371952	3300002514	Marine	MKNLSSEEQITXIVIGIAIGVAVGFVLKTFVDTYYLVGSLP*
Ga0068511_11064741	3300005057	Marine Water	MKNLSNEEQVTLILIGIAIGIGIGFLIKVFIDTHILLQNI*
Ga0066849_100840152	3300005430	Marine	MKNLSSEEQITLIVIGIAIGVAVGFVLKTFVDTYYLVGSLP*
Ga0066849_101309773	3300005430	Marine	MKNLSHEEQITLIVIGIAIGIAIGFVLKTFVDTYYLVGSLPL*
Ga0066849_104071132	3300005430	Marine	MKNLSHEEQITLIVIGIAIGIAIGFVLKTFVDTYYLLGSLPL*
Ga0066865_100521483	3300005523	Marine	EEQITLIVIGIAIGIAVGFVLKTFIDTYYLIGSLPLLEN
Ga0066377_100207585	3300005934	Marine	MKNLSNEEQITLILIGIAIGIGIGFLIKVFVDTHILLQNF*
Ga0066836_102123664	3300006166	Marine	MKNLSSEEQITLIVIGIAIGIAIGFVLKTFVDTYYLVGSLP*
Ga0075446_100519373	3300006190	Marine	MSNQEEMISYILIGVAIGIAIGFLLKVFVDTYKLVESLPI*
Ga0100228_11852932	3300006565	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKTFVDTYYLVGSLPL*
Ga0098038_10273842	3300006735	Marine	MKNLSHEEQITLILIGIAIGIGIGFILKTFVDTYYLVGSLP*
Ga0098038_11471612	3300006735	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKVFLDTYYLLQNL*
Ga0098038_12545123	3300006735	Marine	MKNLSNEEQITLIVIGIAIGIAVGFVLKTFIDTYYLLGSLPL*
Ga0098037_10803422	3300006737	Marine	MKNLSHEEQITLILIGIAIGIGIGFILKTFVDTYYLVGSLP**
Ga0098035_11429623	3300006738	Marine	MKQMNSEEQITLIVIGIAIGIAIGFVLKTFVDTYYLIGSLP*
Ga0098042_10513821	3300006749	Marine	EQITLILIGIAIGIGIGFILKTFVDTYYLVGSLP**
Ga0098040_10296742	3300006751	Marine	MKNLSHEEQITLIVIGIAIGVAVGFVLKTFVDTYYLVGSLPL*
Ga0098048_12323942	3300006752	Marine	MKNLSNEEQITLILIGIAIGIGVGFLIKVFIDTHILLQNI*
Ga0098039_10143361	3300006753	Marine	SEEQITLIVIGIAIGVAIGFVLKAIVDTYDLVRSLPI**
Ga0098044_11178264	3300006754	Marine	MKQMNSEEQITLIVIGIAIGIAIGFVLKTFVDTYYLI
Ga0098044_11837291	3300006754	Marine	KLSMKQMNSEEQITLIVIGIAIGIAIGFVLKTFVDTYYLIGSLP*
Ga0098044_11937972	3300006754	Marine	MKQMNSEEEITLIVIGIAIGIAIGFVLKAVVDTYDLVRSLPI*
Ga0098054_11115003	3300006789	Marine	MKNLSSEEQITLIVIGIAIGVAVGFVLKTFVDTYYLVGSLP**
Ga0098054_11673253	3300006789	Marine	MKNLSHEEQITLILIGIAIGIGIGFILKVFLDTYYLLQNL*
Ga0098054_13259362	3300006789	Marine	MKQLNSEEQITLIVIGIAIGVAIGFVLKAVVDTYDLVRSLPI*
Ga0098055_11119293	3300006793	Marine	MKNLSHEEQVALILIGIAIGIGIGFVLKVFLDTYYLLQNL*
Ga0070749_103851742	3300006802	Aqueous	MKNLSNEEQITLILIGIAIGIGIGFLIKVFIDTHILLQNF*
Ga0075481_103474552	3300006868	Aqueous	NMKNLSNEEQITLILIGIAIGIGIGFLIKVFIDTHILLQNF*
Ga0070750_102781662	3300006916	Aqueous	LNMKNLSHEEQITLILIGIAIGIGIGFVLKVFVDSYIIIERLPL*
Ga0098045_10103772	3300006922	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKSFVDTYYLLQNL*
Ga0098053_10333852	3300006923	Marine	MKNLSSEEQITLIVIGIAIGVAVGFVLKTFVDTYYLLGSLPLLEN
Ga0098036_10647341	3300006929	Marine	MKQMNSEEQITLIVIGIAIGVAVGFVLKTFVDTYYLVGSLP**
Ga0098036_11109632	3300006929	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKTFVDTYYLLGSLPL*
Ga0098036_12827842	3300006929	Marine	MKNLSHEEQITLILIGIAIGIAIGFVLKTFVDTYYLVGSLPL*
Ga0102853_10819542	3300007543	Estuarine	MKNLSHEEQITLILICIAIGIGIGFVLKVFLDTYYLLQNL*
Ga0110931_12066091	3300007963	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKSFVDTYY
Ga0098052_13319012	3300008050	Marine	MNKITDNEDMISYILIGIAIGIAIGFVLKAVVDTYDLVRSLPI*
Ga0115566_100712402	3300009071	Pelagic Marine	MKNLSHEEQVTLILIGIAIGIGIGFVLKVFLDTYYLLQNL*
Ga0114995_105531312	3300009172	Marine	MKNLNHEEQITLILIGIAIGIGIGFVLKVFVDTYIIIQGLPV*
Ga0114908_11763262	3300009418	Deep Ocean	MKQEEIIEYICIGIAIGIAIGFVLKAIIDTYDLVWSLPL*
Ga0114994_101043805	3300009420	Marine	MKNLNHEEQITLILIGIAIGIGIGFVSKVFLDSYVIIQGLPA*
Ga0114915_11074222	3300009428	Deep Ocean	MKNLSHEEQITLILIGIAIGIGIGFVLKVFVDSYIIIEGLPL*
Ga0114932_107550572	3300009481	Deep Subsurface	MKQLDSEEQITLIVIGIAIGIAIGFVLKAVVDTYDLVRSLPI*
Ga0115013_108811831	3300009550	Marine	MKNLSHEEQITLVVIGIAIGIAIGFVLKTFVDTYYLVGSLPL*
Ga0115011_101189583	3300009593	Marine	MKNLSSEEQITLVVIGIAIGIAIGFVLKTFVDTYYLVGSLPL*
Ga0115011_114224372	3300009593	Marine	MRNLSHEEQITLIVIGIAIGIAVGFVLKTFIDTYYLLGSLPL*
Ga0115012_108441442	3300009790	Marine	MKNLSNEEQITLILIGIAIGIGIGFLIKVFIDTHILLQNI*
Ga0115012_116324212	3300009790	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKTFVDTYYLIGSLPL*
Ga0098061_10530172	3300010151	Marine	MNSEEQITLIVIGIAIGIAIGFVLKTFVDTYYLIGSLP*
Ga0151674_10834671	3300011252	Marine	MKNLSHEEQITLILIGIAIGIAIGFVLKTFVDTYYLLGSLPL*
Ga0160423_106489602	3300012920	Surface Seawater	MKNLNSEEQITLILIGIAIGIGIGFLIKVFIDTHILLQNF*
Ga0163110_102301203	3300012928	Surface Seawater	MKNLSHEEQITLILIGIAIGIGIGFILKTFVDTYYLLGSLPL*
Ga0163110_102966983	3300012928	Surface Seawater	MKNLSHEEQITLILIGIAIGIGIGFILKTFVDTYYLIGSLPQ*
Ga0163111_111330442	3300012954	Surface Seawater	MRNLSHEEQITLIVIGIAIGIAVGFVLKTFIDTYYLVGSLPL*
Ga0181374_10645442	3300017702	Marine	MNSEEQITLIVIGIAIGIAIGFVLKTFVDTYDLVRSLPI
Ga0181372_10217612	3300017705	Marine	MKQLDSEEQITLIVIGIAIGIAIGFVLKTFVDTYYLIGSLP
Ga0181372_10310873	3300017705	Marine	MKNLSHEEQITLILIGIAIGIAIGFVLKTFVDTYYLVGSLPL
Ga0181377_10730531	3300017706	Marine	LSHEEQITLILIGIAIGIGIGFVLKVFLDTYYLLQNL
Ga0181369_10606003	3300017708	Marine	MKNLSNEEQITLILIGIAIGIGVGFLIKVFIDTHILLQNI
Ga0181387_10105673	3300017709	Seawater	MKNLSSEEQITLILIGITIGIAIGFVLKAFVDTYYLVGSLP
Ga0181387_10334201	3300017709	Seawater	MKNLSHEEQITLILICIAIGIGIGFVLKVFLDTYYLLQNL
Ga0181396_11180162	3300017729	Seawater	MKNLSHDEQITLIVIGIAIGIAIGFVLKTFVDTYYLVGSLP
Ga0181416_11085242	3300017731	Seawater	MKNLSHEEQITLILIGIAIGVGIGFVLKVFVDSYIIIERLPL
Ga0181421_10748142	3300017741	Seawater	MKNLSHDEQITLIVIGIAIGIAIGFVLKTFVDTYYLVGSLPX
Ga0181420_10313491	3300017757	Seawater	MNSEEQITLIVIGIAIGIAIGFVLKVIVDTYDLVGSLPI
Ga0181420_10340971	3300017757	Seawater	LNMKNLSHDEQITLIVIGIAIGIAIGFVLKVYIDTYILIEGLPL
Ga0181420_11569273	3300017757	Seawater	MKNLSHDEQITLIVIGIAIGIAIGFVLKTFVDTYYLVGSLPL
Ga0187217_12154131	3300017770	Seawater	MKNLSSEEQITLILIGITIGIAIGFVLKAFVDTYYL
Ga0181430_10970184	3300017772	Seawater	MKNLSHEEQITLILIGIAIGIGIGFILKVFLDTYYLLQNL
Ga0181432_10174015	3300017775	Seawater	MNNMNQHETMISYILVGIAIGIAIGFLLKVFVDTYNLVESLPI
Ga0181432_10255412	3300017775	Seawater	MNKITDHEDMITYIIIGIAIGIAIGFVLKAFVDTYIILGNFPI
Ga0181432_10346066	3300017775	Seawater	MKQEEIIEYICIGIAIGIAIGFVLKAIIDTYDLVWSLPI
Ga0181432_10578052	3300017775	Seawater	MSNMSQHEDMITYIIIGIAIGIAIGFVLKAFVDTYIILGNFPI
Ga0181432_10893543	3300017775	Seawater	MNKITDNEDMISYILIGIAIGIAIGFVLKAFVDTYDLVRSFPI
Ga0181432_11016722	3300017775	Seawater	MSNMNQHEDMISYILIGVAIGIAIGFLLKVFVDTYNLVESLPI
Ga0181432_11267491	3300017775	Seawater	ISMNKITDNEDMISYILIGVAIGIAIGFVLKAFVDTYDIVRSFPI
Ga0181432_11560163	3300017775	Seawater	MKHEEIIEYITIGIAIGIAIGFVLKAIIDTYDLVWSLPI
Ga0181432_12166852	3300017775	Seawater	MKQEEKIEYIVIGIAIGIAIGFVLKVIIDTYNIVGSLPI
Ga0181432_12719512	3300017775	Seawater	MLGRRMMPNEEKVEYIVIGIAIGIAIGFVLKAILDTYDLVWSLPIX
Ga0181432_12881372	3300017775	Seawater	MNKITDNEDMISYILIGVAIGIAIGFVLKAIVDTYDLVRSLPI
Ga0181432_12958002	3300017775	Seawater	MNKITDNEDMISYILIGVAIGIAIGFVLKAVVDTYDLVRSLPI
Ga0181583_106477151	3300017952	Salt Marsh	MKNLSNEEQITLILIGIAIGIGIGFLIKVFIDTHILLQNF
Ga0181581_106679232	3300017962	Salt Marsh	MKNLSNEEQITLILIGIAIGIGLGFLIKVFIDTHILLQNF
Ga0206125_100135804	3300020165	Seawater	MKNLSHEEQITLILIGIAIGIGIGFVLKVFVDSYIIIERLPL
Ga0206127_10326943	3300020169	Seawater	MKNLSSEEQITLILIGIAIGIGIGFVLKVFVDSYIIIERLPL
Ga0211654_100142612	3300020247	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKVFLDTYYLLQNL
Ga0211542_10134574	3300020312	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKTFVDTYYLVGSLPL
Ga0211504_10629922	3300020347	Marine	MKNLSHEEQVTLILIGIAIGIGIGFVLKAFLDTYYLLQNL
Ga0211647_100989893	3300020377	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKTFVDTYYLVGSLP
Ga0211527_100433682	3300020378	Marine	EQITLILIGIAIGIGIGFVLKTFVDTYYLVGSLPLXLKNX
Ga0211652_100583941	3300020379	Marine	QITLIVIGIAIGIAVGFVLKTFIDTYYLLGSLPLXLEN
Ga0211659_100892532	3300020404	Marine	MKNLSNEEQITLIVIGIAIGIAVGFVLKTFIDTYYLLGSLPL
Ga0211496_100795164	3300020405	Marine	MKNLSHEEQITLILIGIAIGIGIGFILKTFVDTYYLIGS
Ga0211651_100713092	3300020408	Marine	MKNLSNEEQITLILIGIAIGIGIGFLIKVFIDTHILLQNI
Ga0211523_100737785	3300020414	Marine	MKNLSNEEQITLILIGIAIGIGIGFLIKVFIDTHILLQN
Ga0211653_100698813	3300020421	Marine	MKNLSNEEQITLIVIGIAIGIAVGFVLKTFIDTYYLLGSLPLXLKN
Ga0211708_102171653	3300020436	Marine	MKNLNSEEQITLILIGIAIGIGIGFLIKAFIDTHILLQNF
Ga0211564_103871482	3300020445	Marine	MKNLSSEEQITLIVIGIAIGIAIGFVLKTFVDTYYLIGSLPL
Ga0211642_105108932	3300020449	Marine	MNKITDNEDMISYILIGIAIGIAIGFVLKAIVDTYDLVRSLPI
Ga0211473_101019853	3300020451	Marine	MKNLSHEEQITLILIGIAIGIAIGFVLKTFVDTYYLLGSLPL
Ga0211643_102356073	3300020457	Marine	MKNLSHEEQITLILIGIAIGIGIGFILKTFVDTYYLVGSLP
Ga0211546_104920661	3300020462	Marine	MKNLSSEEQITLILIGIAIGIAIGFVLKTFVDTYYLLGSLPL
Ga0211546_105745933	3300020462	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKTFVDTYYLV
Ga0211543_106109081	3300020470	Marine	LSHEEQITLILIGIAIGIGIGFVLKTFVDTYYLVGSLPLXLKNX
Ga0211547_103440313	3300020474	Marine	MKNLSSEEQITLILIGIAIGVAIGFVLKTFVDTYYLVGSLPL
Ga0213860_104242073	3300021368	Seawater	MKNLSSEEQITLILIGIAIGIVIGFVLKTFVDTYYLIGSLPL
Ga0213869_102926483	3300021375	Seawater	MKNLSHEEQITLILIGIAIGIGIGFVLKAFLDTYYLLQNL
Ga0244775_100997447	3300024346	Estuarine	MKNLSHEEQITLILIGIAIGVGIGFVLKVFVDSYIIIEGLPL
Ga0207896_10684222	3300025071	Marine	MKNLSSEEQITLILIGIAIGVAIGFVLKTFVDTYYLLGSLP
Ga0208298_10749482	3300025084	Marine	MKNLSHEEQITLILIGIAIGIAIGFVLKTFIDTYYLLGSLPL
Ga0208011_10181004	3300025096	Marine	MKQMNSEEQITLIVIGIAIGIAIGFVLKTFVDTYYLIGSLP
Ga0208010_11294143	3300025097	Marine	MKQMNSEEQITLIVIGIAIGIAIGFVLKAVVDTYDLVRSLPI
Ga0209349_10724563	3300025112	Marine	MKQMNSEEQITLIVIGIAIGIAIGFVLKVIVDTYDLVRSLPI
Ga0209232_10286916	3300025132	Marine	MKNLSSEEQITLVVIGIAIGIAIGFVLKTFVDTYYLVGSLPL
Ga0208299_10787113	3300025133	Marine	MNSEEEITLIVIGIAIGIAIGFVLKAVVDTYDLVRSLPI
Ga0208299_11041461	3300025133	Marine	MKNLSSEEQITLIVIGIAIGVAVGFVLKTFVDTYYLVGSLPX
Ga0209645_10248452	3300025151	Marine	MRNLSHEEQITLIVIGIAIGIAVGFVLKTFIDTYYLLGSLPL
Ga0208150_10394401	3300025751	Aqueous	RLNMKNLSNEEQITLILIGIAIGIGIGFLIKVFIDTHILLQNF
Ga0208407_11133102	3300026257	Marine	MKNLSHEEQITLIVIGIAIGIAIGFVLKTFVDTYYLVGSLPL
Ga0208407_11275772	3300026257	Marine	MKNLSSEEQITLIVIGIAIGVAVGFVLKTFVDTYYLVGSLP
Ga0208408_11175232	3300026260	Marine	MKNLSHEEQITLIVIGIAIGIAIGFVLKTFVDTYYLVGSLPLXLEN
Ga0208764_100930275	3300026321	Marine	MKNLSSEEQITLIVIGIAIGIAIGFVLKTFVDTYYLVGSLP
Ga0209709_102073073	3300027779	Marine	MKNLNHEEQITLILIGIAIGIGIGFVSKVFLDSYVIIQGLPA
Ga0209503_100584751	3300027859	Marine	MKNLSHEEQITLILIGIAIGIGIGFVLKTFLDTYYLLQNL
Ga0257107_10979891	3300028192	Marine	MSNMNQHEDMITSILIGVGIGIGIGFVLKVFIDTYI
Ga0183748_10125957	3300029319	Marine	MKNLSHEEQITLILIGIAIGIGIGFILKTFVDTYYLVGSLPL
Ga0183755_100638411	3300029448	Marine	MKNLSHEEQITLILIGIAIGIGVGFVLKVFLDTYTMIEGLPL
Ga0315320_106286242	3300031851	Seawater	EEQITLILIGIAIGVAIGFVLKTFVDTYYLVGSLPX
Ga0315327_101708661	3300032032	Seawater	SMKNLSHDEQITLIVIGIAIGIAIGFVLKTFVDTYYLVGSLPX
Ga0315315_101997722	3300032073	Seawater	MKNLSHEEQITLILIGIAIGIGIGFVLKTFVDTYYLIGSLPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056889

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences