Metagenome Family F056884

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056884
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	90 residues
Representative Sequence	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Number of Associated Samples	109
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	53.28 %
% of genes near scaffold ends (potentially truncated)	26.28 %
% of genes from short scaffolds (< 2000 bps)	72.99 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (100.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.898 % of family members)
Environment Ontology (ENVO)	Unclassified (43.066 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.985 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.26% β-sheet: 24.35% Coil/Unstructured: 57.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00300	His_Phos_1	27.01
PF00149	Metallophos	24.82
PF02426	MIase	2.92
PF05235	CHAD	2.92
PF07452	CHRD	2.19
PF08240	ADH_N	0.73
PF13460	NAD_binding_10	0.73
PF00296	Bac_luciferase	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	2.92
COG4829	Muconolactone delta-isomerase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.92
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	2.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	63.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	63.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	60.58 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	1.46 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	60.58 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	0.73 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	60.58 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	0.73 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918002\|contig04758	All Organisms → cellular organisms → Archaea	1517	Open in IMG/M
2162886007\|SwRhRL2b_contig_722483	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1195	Open in IMG/M
2228664021\|ICCgaii200_c0895323	All Organisms → cellular organisms → Archaea	3520	Open in IMG/M
3300000787\|JGI11643J11755_11840309	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1810	Open in IMG/M
3300000881\|JGI10215J12807_1143495	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	723	Open in IMG/M
3300000891\|JGI10214J12806_10953203	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	657	Open in IMG/M
3300001431\|F14TB_103017140	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	511	Open in IMG/M
3300003987\|Ga0055471_10168407	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	674	Open in IMG/M
3300003997\|Ga0055466_10134046	All Organisms → cellular organisms → Archaea	698	Open in IMG/M
3300004114\|Ga0062593_101482341	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	730	Open in IMG/M
3300004156\|Ga0062589_100725313	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	887	Open in IMG/M
3300004463\|Ga0063356_106166257	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	514	Open in IMG/M
3300004480\|Ga0062592_100852362	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	815	Open in IMG/M
3300004643\|Ga0062591_100185168	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1507	Open in IMG/M
3300005289\|Ga0065704_10002064	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	5956	Open in IMG/M
3300005289\|Ga0065704_10232056	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1040	Open in IMG/M
3300005294\|Ga0065705_10000600	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1587	Open in IMG/M
3300005328\|Ga0070676_10044282	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2590	Open in IMG/M
3300005336\|Ga0070680_100058119	All Organisms → cellular organisms → Archaea	3163	Open in IMG/M
3300005343\|Ga0070687_100299754	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1019	Open in IMG/M
3300005345\|Ga0070692_10019689	All Organisms → cellular organisms → Archaea	3261	Open in IMG/M
3300005353\|Ga0070669_101333951	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	622	Open in IMG/M
3300005440\|Ga0070705_100093625	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1879	Open in IMG/M
3300005441\|Ga0070700_100496747	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	938	Open in IMG/M
3300005457\|Ga0070662_100793554	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	805	Open in IMG/M
3300005536\|Ga0070697_100198427	All Organisms → cellular organisms → Archaea	1705	Open in IMG/M
3300005719\|Ga0068861_102099859	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	565	Open in IMG/M
3300006049\|Ga0075417_10066446	All Organisms → cellular organisms → Archaea	1588	Open in IMG/M
3300006169\|Ga0082029_1135093	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	587	Open in IMG/M
3300006169\|Ga0082029_1514036	All Organisms → cellular organisms → Archaea	2397	Open in IMG/M
3300006844\|Ga0075428_100290327	All Organisms → cellular organisms → Archaea	1759	Open in IMG/M
3300006844\|Ga0075428_100620196	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1154	Open in IMG/M
3300006844\|Ga0075428_102683754	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	508	Open in IMG/M
3300006845\|Ga0075421_100226432	All Organisms → cellular organisms → Archaea	2301	Open in IMG/M
3300006845\|Ga0075421_100713228	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1164	Open in IMG/M
3300006845\|Ga0075421_101875296	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	642	Open in IMG/M
3300006845\|Ga0075421_102299889	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	566	Open in IMG/M
3300006846\|Ga0075430_100172879	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1797	Open in IMG/M
3300006847\|Ga0075431_100122919	All Organisms → cellular organisms → Archaea	2678	Open in IMG/M
3300006847\|Ga0075431_100349623	All Organisms → cellular organisms → Archaea	1486	Open in IMG/M
3300006853\|Ga0075420_100318925	All Organisms → cellular organisms → Archaea	1346	Open in IMG/M
3300006880\|Ga0075429_100759313	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	849	Open in IMG/M
3300006969\|Ga0075419_10028528	All Organisms → cellular organisms → Archaea	3457	Open in IMG/M
3300006969\|Ga0075419_10643849	All Organisms → cellular organisms → Archaea	747	Open in IMG/M
3300006969\|Ga0075419_11195885	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	561	Open in IMG/M
3300009081\|Ga0105098_10014749	All Organisms → cellular organisms → Archaea	2925	Open in IMG/M
3300009094\|Ga0111539_12716910	All Organisms → cellular organisms → Archaea	574	Open in IMG/M
3300009100\|Ga0075418_10106710	All Organisms → cellular organisms → Archaea	2974	Open in IMG/M
3300009100\|Ga0075418_11151154	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	840	Open in IMG/M
3300009146\|Ga0105091_10461357	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	640	Open in IMG/M
3300009147\|Ga0114129_10308917	All Organisms → cellular organisms → Archaea	2105	Open in IMG/M
3300009147\|Ga0114129_10685828	All Organisms → cellular organisms → Archaea	1318	Open in IMG/M
3300009147\|Ga0114129_11606902	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	796	Open in IMG/M
3300009156\|Ga0111538_12742481	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	617	Open in IMG/M
3300009553\|Ga0105249_10776430	All Organisms → cellular organisms → Archaea	1021	Open in IMG/M
3300010403\|Ga0134123_10060914	All Organisms → cellular organisms → Archaea	2873	Open in IMG/M
3300012883\|Ga0157281_1000534	All Organisms → cellular organisms → Archaea	2596	Open in IMG/M
3300012885\|Ga0157287_1023939	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	820	Open in IMG/M
3300012891\|Ga0157305_10085939	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	750	Open in IMG/M
3300012897\|Ga0157285_10006196	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2211	Open in IMG/M
3300012900\|Ga0157292_10082841	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	926	Open in IMG/M
3300012901\|Ga0157288_10048110	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	979	Open in IMG/M
3300012903\|Ga0157289_10280669	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	580	Open in IMG/M
3300012904\|Ga0157282_10120123	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	763	Open in IMG/M
3300012905\|Ga0157296_10009571	All Organisms → cellular organisms → Archaea	1622	Open in IMG/M
3300012906\|Ga0157295_10378197	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	521	Open in IMG/M
3300012909\|Ga0157290_10081412	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	915	Open in IMG/M
3300012913\|Ga0157298_10307919	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	565	Open in IMG/M
3300012914\|Ga0157297_10013300	All Organisms → cellular organisms → Archaea	1724	Open in IMG/M
3300012914\|Ga0157297_10026198	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1354	Open in IMG/M
3300012916\|Ga0157310_10157514	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	790	Open in IMG/M
3300013096\|Ga0157307_1006099	All Organisms → cellular organisms → Archaea	1775	Open in IMG/M
3300013096\|Ga0157307_1012379	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1332	Open in IMG/M
3300013102\|Ga0157371_10328696	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1110	Open in IMG/M
3300015077\|Ga0173483_10006953	All Organisms → cellular organisms → Archaea	3805	Open in IMG/M
3300015201\|Ga0173478_10001673	All Organisms → cellular organisms → Archaea	4659	Open in IMG/M
3300015371\|Ga0132258_10137897	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	5830	Open in IMG/M
3300015372\|Ga0132256_100169099	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2211	Open in IMG/M
3300015374\|Ga0132255_100760741	All Organisms → cellular organisms → Archaea	1442	Open in IMG/M
3300018051\|Ga0184620_10290542	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	551	Open in IMG/M
3300018076\|Ga0184609_10186407	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	964	Open in IMG/M
3300018466\|Ga0190268_11528900	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	582	Open in IMG/M
3300019356\|Ga0173481_10078076	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1217	Open in IMG/M
3300019362\|Ga0173479_10195058	All Organisms → cellular organisms → Archaea	849	Open in IMG/M
3300019362\|Ga0173479_10327298	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	710	Open in IMG/M
3300019362\|Ga0173479_10391575	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	667	Open in IMG/M
3300019884\|Ga0193741_1000620	All Organisms → cellular organisms → Archaea	10589	Open in IMG/M
3300019884\|Ga0193741_1007496	All Organisms → cellular organisms → Archaea	2896	Open in IMG/M
3300019997\|Ga0193711_1003590	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1916	Open in IMG/M
3300020003\|Ga0193739_1000092	All Organisms → cellular organisms → Archaea	22005	Open in IMG/M
3300020003\|Ga0193739_1004177	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	3919	Open in IMG/M
3300021073\|Ga0210378_10396437	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	512	Open in IMG/M
3300021972\|Ga0193737_1032703	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	743	Open in IMG/M
3300022694\|Ga0222623_10157383	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	884	Open in IMG/M
3300022737\|Ga0247747_1001327	All Organisms → cellular organisms → Archaea	2465	Open in IMG/M
3300022737\|Ga0247747_1010737	All Organisms → cellular organisms → Archaea	930	Open in IMG/M
3300022915\|Ga0247790_10115023	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	672	Open in IMG/M
3300023073\|Ga0247744_1089121	All Organisms → cellular organisms → Archaea	543	Open in IMG/M
3300023168\|Ga0247748_1030069	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	784	Open in IMG/M
3300023261\|Ga0247796_1022139	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	995	Open in IMG/M
3300025559\|Ga0210087_1004729	All Organisms → cellular organisms → Archaea	3129	Open in IMG/M
3300025893\|Ga0207682_10103810	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1245	Open in IMG/M
3300025904\|Ga0207647_10013071	All Organisms → cellular organisms → Archaea	5768	Open in IMG/M
3300025917\|Ga0207660_10145959	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1813	Open in IMG/M
3300025933\|Ga0207706_10168286	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1926	Open in IMG/M
3300025945\|Ga0207679_11867290	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	548	Open in IMG/M
3300026075\|Ga0207708_10039206	All Organisms → cellular organisms → Archaea	3609	Open in IMG/M
3300026075\|Ga0207708_10039534	All Organisms → cellular organisms → Archaea	3594	Open in IMG/M
3300026116\|Ga0207674_10125752	All Organisms → cellular organisms → Archaea	2530	Open in IMG/M
3300027462\|Ga0210000_1003633	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2226	Open in IMG/M
3300027471\|Ga0209995_1022617	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1044	Open in IMG/M
3300027665\|Ga0209983_1004475	All Organisms → cellular organisms → Archaea	2937	Open in IMG/M
3300027722\|Ga0209819_10161151	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	784	Open in IMG/M
3300027876\|Ga0209974_10019506	All Organisms → cellular organisms → Archaea	2248	Open in IMG/M
3300027880\|Ga0209481_10071660	All Organisms → cellular organisms → Archaea	1639	Open in IMG/M
3300027880\|Ga0209481_10155436	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1131	Open in IMG/M
3300027880\|Ga0209481_10452507	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	661	Open in IMG/M
3300027907\|Ga0207428_10502563	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	880	Open in IMG/M
3300027909\|Ga0209382_10141907	All Organisms → cellular organisms → Archaea	2789	Open in IMG/M
3300027909\|Ga0209382_11245990	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	758	Open in IMG/M
3300027956\|Ga0209820_1158446	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	627	Open in IMG/M
3300031538\|Ga0310888_10037375	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	2192	Open in IMG/M
3300031538\|Ga0310888_10837125	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	571	Open in IMG/M
3300031547\|Ga0310887_10073609	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1614	Open in IMG/M
3300031547\|Ga0310887_10124040	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1317	Open in IMG/M
3300031847\|Ga0310907_10013849	All Organisms → cellular organisms → Archaea	2577	Open in IMG/M
3300031847\|Ga0310907_10041120	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1737	Open in IMG/M
3300031858\|Ga0310892_10201732	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1196	Open in IMG/M
3300031892\|Ga0310893_10181569	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	837	Open in IMG/M
3300031908\|Ga0310900_10047302	All Organisms → cellular organisms → Archaea	2502	Open in IMG/M
3300031940\|Ga0310901_10000697	All Organisms → cellular organisms → Archaea	6473	Open in IMG/M
3300031940\|Ga0310901_10022268	All Organisms → cellular organisms → Archaea	1851	Open in IMG/M
3300031944\|Ga0310884_10602235	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	656	Open in IMG/M
3300032017\|Ga0310899_10035977	All Organisms → cellular organisms → Archaea	1726	Open in IMG/M
3300032075\|Ga0310890_11083408	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	648	Open in IMG/M
3300032179\|Ga0310889_10217202	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	891	Open in IMG/M
3300032180\|Ga0307471_101416547	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	855	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.77%
Host-Associated	Host-Associated	37.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.74%
Plants	Host-Associated → Plants	37.23%
Aquatic	Environmental → Aquatic	8.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.49%
Freshwater	Environmental → Aquatic → Freshwater	3.65%
Marine	Environmental → Aquatic → Marine	2.19%
Sediment	Environmental → Aquatic → Sediment	2.19%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.63%
Loam	Environmental → Terrestrial → Soil → Loam	8.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.19%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.73%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	2.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.19%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.46%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.46%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.73%
Rhizosphere And Bulk Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Rhizosphere And Bulk Soil	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918002	Rhizosphere and bulk soil microbial communities from the Great Lakes - Sample MSB1	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MSB1_00113200	2140918002	Rhizosphere And Bulk Soil	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERL
SwRhRL2b_0762.00001200	2162886007	Switchgrass Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
ICCgaii200_08953233	2228664021	Soil	LEYCTQNRSEPNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMDNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
JGI11643J11755_118403092	3300000787	Soil	LEYCTQNRSEPNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMDNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
JGI10215J12807_11434952	3300000881	Soil	MKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
JGI10214J12806_109532032	3300000891	Soil	MKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPIDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
F14TB_1030171401	3300001431	Soil	GVGINLEYCTQNRSESNLDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0055471_101684071	3300003987	Natural And Restored Wetlands	LEYRTQKRSVSNIDLIRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMNNGIRYYYVEIQCDDRNFMINALGSEAERLFKAVNSNSE*
Ga0055466_101340462	3300003997	Natural And Restored Wetlands	LEYRTQKRSVSNIDLIRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMNNGIRYYYVEIQCDDRNFMINALGSE
Ga0062593_1014823412	3300004114	Soil	VILTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0062589_1007253131	3300004156	Soil	RDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0063356_1061662571	3300004463	Arabidopsis Thaliana Rhizosphere	MKQNIASGINLEDKDQKPSISNIDLRGDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCYEGNFIINAHGSEAERLFKAVHSISE*
Ga0062592_1008523621	3300004480	Soil	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0062591_1001851682	3300004643	Soil	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0065704_100020647	3300005289	Switchgrass Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLREKKYHFTVVPKDIMYMRNGIRYYYVEIQCDDRNFMVNAYGSEAERLFKAVNSIME*
Ga0065704_102320561	3300005289	Switchgrass Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0065705_100006001	3300005294	Switchgrass Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYXFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAYGSEAERLFKAVNSIME*
Ga0070676_100442822	3300005328	Miscanthus Rhizosphere	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE*
Ga0070680_1000581192	3300005336	Corn Rhizosphere	VILTKYVTSYGDGITLEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0070687_1002997541	3300005343	Switchgrass Rhizosphere	IGDGINLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE*
Ga0070692_100196894	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LEYCTQNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYSMVNAHGSEAEILFKAVNSITE*
Ga0070669_1013339512	3300005353	Switchgrass Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDKNFMVNAYGSEAERLFKAVNSNPK*
Ga0070705_1000936251	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VILTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYCYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0070700_1004967471	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDKNFMVNAYGSEAERLFKAVNSN
Ga0070662_1007935542	3300005457	Corn Rhizosphere	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAYGSEAERLFKAVNSITE*
Ga0070697_1001984272	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LEHCTQKRSVSNIDLTGDLQLITIEDLIPQLRDKEYHFTVVRKDIMYMHNGVRYYYVEIQCDDSNFMINAIGSDAERLFKAVNFNTE*
Ga0068861_1020998591	3300005719	Switchgrass Rhizosphere	IRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0075417_100664462	3300006049	Populus Rhizosphere	MTQDMVSRKNLEYKAQKSNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRHYYIEIQCDDGNFVVNAHGSEAERLFKAVHSISE*
Ga0082029_11350932	3300006169	Termite Nest	LEYKTQRPNISNINLTRDLQPITIEDLIPQLRDKEYHFTIVPKDLMHLNNGIRHYYVEIQCEDGNLVVNAHGSEAERLFKAVHSISE*
Ga0082029_15140363	3300006169	Termite Nest	MKQNIVSGNKFGIQDSETHISSIDLTLDLKPITIEDLVPQLRDKEYHFTVVPKDLMHLNNGIRHYYVEIQCDDGNFVVNAHGSEAERLFKAVHSISE*
Ga0075428_1002903272	3300006844	Populus Rhizosphere	LEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHFTVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0075428_1006201963	3300006844	Populus Rhizosphere	INLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKNIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLFKAVHSISE*
Ga0075428_1026837542	3300006844	Populus Rhizosphere	MKQNIASGINLEDKDQKPSISNTDLRWDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCDEGNFIINAHGSEAERLFKVVHSIPE*
Ga0075421_1002264322	3300006845	Populus Rhizosphere	MKQYIVSGINLEYKSQKPNISSIDLTRDLQPITIEDLVPQLRDKEYHFSVVPKDIMHMNNGIRHYYVEIQYDDGNFMINAYGSEAERLFKVVHSISE*
Ga0075421_1007132281	3300006845	Populus Rhizosphere	TVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLLKPSILFLNNNP*
Ga0075421_1018752961	3300006845	Populus Rhizosphere	LEYKSQKPNISSIDLTRDIQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRYYYVEIQCDDGNLVVNAHGSEAERLFKAVHSISE*
Ga0075421_1022998892	3300006845	Populus Rhizosphere	MTQNMVSKKNLEYKAQKSNISSIDLTRDLEPITIEDLVLQLRDKEYHFTVVPKDIMYMNNGIRHYYVEIQCDDRNFVVNAHGIEAERLFKAVHSISE*
Ga0075430_1001728792	3300006846	Populus Rhizosphere	MAQNTVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKNIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLFKAVHSISE*
Ga0075431_1001229193	3300006847	Populus Rhizosphere	LEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHITVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0075431_1003496232	3300006847	Populus Rhizosphere	MTQDMVSRKNLEYKAQKSNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGVRHYYVEIQCDEGNFVVNAHGSEAERLFKAVHSISE*
Ga0075420_1003189252	3300006853	Populus Rhizosphere	LVYKSQKPNISSIDLTRDIQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRYYYVEIQCDDGNLVVNAHGSEAERLFKAVHSISE*
Ga0075429_1007593131	3300006880	Populus Rhizosphere	VGINLEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHFTVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0075419_100285285	3300006969	Populus Rhizosphere	MAQNTVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKNIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLLKPSILFLNNNP*
Ga0075419_106438492	3300006969	Populus Rhizosphere	LTRDLQPITIEDLVPQLRDKEYHFSVVPKEIMHMNNGIRHYYVEIQYDDGNFMINAYGSEAERLFKVVHSISE*
Ga0075419_111958852	3300006969	Populus Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYTHNGIRYYYVEMQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0105098_100147492	3300009081	Freshwater Sediment	MKQNIVSRINLEYKTQKPNIFSIDLTRDLQPITIEDLVPQLRGKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGSEAERLFKAVHSISE*
Ga0111539_127169102	3300009094	Populus Rhizosphere	MTQDMVSRKNLEYKAQKSNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGVRHYYVEIQCDEGNFVVNA
Ga0075418_101067104	3300009100	Populus Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQRDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0075418_111511541	3300009100	Populus Rhizosphere	YKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHFTVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0105091_104613572	3300009146	Freshwater Sediment	MKQNIVSRINLEYKTQKPNIFSIDLTRDLQPITIEDLVPQLRGKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGSDRQYIHSFQV*
Ga0114129_103089172	3300009147	Populus Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNVHGSEAERLFKAVNSITE*
Ga0114129_106858282	3300009147	Populus Rhizosphere	VGINLEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHITVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE*
Ga0114129_116069021	3300009147	Populus Rhizosphere	MAQNTVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLFKAVHSISE*
Ga0111538_127424812	3300009156	Populus Rhizosphere	GDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVVIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0105249_107764301	3300009553	Switchgrass Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLREKKYHFTVVPKDIMYMRNGIRYYYVEIRCEVRNLREIAFGSEVEG*
Ga0134123_100609143	3300010403	Terrestrial Soil	VILTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQFRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE*
Ga0157281_10005344	3300012883	Soil	MKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFNVNAHGSEAERLFKVIQSILE*
Ga0157287_10239392	3300012885	Soil	MNLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0157305_100859392	3300012891	Soil	MKQNIASGINLEDKDQKPSISNIDLRGDLQSITFEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0157285_100061961	3300012897	Soil	MKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDVGNFIVNAHGSEAERLFKIIQSISE*
Ga0157292_100828411	3300012900	Soil	MKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0157288_100481102	3300012901	Soil	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDRYFMVNAHGSEAEILFKAVNSITE*
Ga0157289_102806691	3300012903	Soil	PSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0157282_101201231	3300012904	Soil	MKQNIASGINLEDRAQKPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSILE*
Ga0157296_100095711	3300012905	Soil	MKQNIASGINLEDRAQKSSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVLPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE*
Ga0157295_103781972	3300012906	Soil	GVGINLEYCTHNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0157290_100814121	3300012909	Soil	SGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIRSISE*
Ga0157298_103079191	3300012913	Soil	MKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAER
Ga0157297_100133003	3300012914	Soil	MKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE*
Ga0157297_100261984	3300012914	Soil	IDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0157310_101575141	3300012916	Soil	MKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE*
Ga0157307_10060991	3300013096	Soil	LEYCTHNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE*
Ga0157307_10123791	3300013096	Soil	MKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKFIQSISE*
Ga0157371_103286961	3300013102	Corn Rhizosphere	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMFMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE*
Ga0173483_100069533	3300015077	Soil	MKQNIASGINLEDRAQKSSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0173478_100016733	3300015201	Soil	MKQNIASGINLEDRAQKPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE*
Ga0132258_101378976	3300015371	Arabidopsis Rhizosphere	LEYCTQKRSVSNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0132256_1001690992	3300015372	Arabidopsis Rhizosphere	LEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE*
Ga0132255_1007607413	3300015374	Arabidopsis Rhizosphere	LEYCTQKRSVSNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDSNFMINANGS
Ga0184620_102905422	3300018051	Groundwater Sediment	TKSDIAAGISLEYHAQKRNISNNDLARNLQLITIEDLIPQLRHKEYQFTVVPKDIMYMHNGMRYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPE
Ga0184609_101864071	3300018076	Groundwater Sediment	ISLEYHAQKRNISNNDLTRNLQLITIEDLIPQLRHKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPE
Ga0190268_115289001	3300018466	Soil	MKQNIGSGINLEYKSQKPHISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGTRHHYVEIQCDDGNFVVNAHGNEAERLFKAVHSISE
Ga0173481_100780762	3300019356	Soil	CIGVGINLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0173479_101950582	3300019362	Soil	VLLTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANG
Ga0173479_103272981	3300019362	Soil	LEYCTHNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0173479_103915752	3300019362	Soil	MKQNIASGINLEDRAQKSSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE
Ga0193741_10006203	3300019884	Soil	MNQSIASGIDSERRTQIISIEDLYPQLRNKQYYFTVVPGDIMHMHNGIKYYYVEIQCDGKNFLINAYGNMAERLFKAVHSTHQ
Ga0193741_10074963	3300019884	Soil	MKQNIGGGINLEYKSQKPNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGNEAERLFKAVHSISE
Ga0193711_10035904	3300019997	Soil	LEYCTQKRSVTDINSTRDLQLITIEDLIPQLRDKEYHFTVIPKDIMYMRNGIRYYYVEIQCDDRYFMVNAHGSDAERLFKAVNSNPK
Ga0193739_100009218	3300020003	Soil	MMKQNIGDRINLEYRTQKRNISNIDLSRDLQLSTIEDLIPQLRDKEYHFTVVPKDIMYMHNGISYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPQ
Ga0193739_10041773	3300020003	Soil	MDSTHDLQQITIEDLLPQLRNMQYHFTVVPEEIMYMGSGIKYYYVEIQSDDKNFMINAHGSEAERLFKAVHSIP
Ga0210378_103964371	3300021073	Groundwater Sediment	NDLTRNLQLITIEDLIPQLRHKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPE
Ga0193737_10327031	3300021972	Soil	MMKQNIGGTINLEYRTQKRNISNIDLIRDLQLITIEDLIPQIRDKEYHFTVVPKDIMYMHNGISYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPQ
Ga0222623_101573831	3300022694	Groundwater Sediment	LEYHAQKRNISNNDLTRNLQLITIENLIPQLRHKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDGNFMVNAHGSDAERLFKAVNSNPEYTPFKEPNMLFYASMICKL
Ga0247747_10013274	3300022737	Soil	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0247747_10107372	3300022737	Soil	MKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE
Ga0247790_101150232	3300022915	Soil	MKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE
Ga0247744_10891211	3300023073	Soil	MKQNIASGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVN
Ga0247748_10300692	3300023168	Soil	LEDRAQRPSISNIDLLRDLHPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKIIQSISE
Ga0247796_10221391	3300023261	Soil	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0210087_10047291	3300025559	Natural And Restored Wetlands	LEYRTQKRSVSNIDLIRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMNNGIRYYYVEIQCDDRNFMINALGSEAERLFKAVNSNSE
Ga0207682_101038102	3300025893	Miscanthus Rhizosphere	LEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0207647_100130714	3300025904	Corn Rhizosphere	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE
Ga0207660_101459592	3300025917	Corn Rhizosphere	VILTKYVTSYGDGITLEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0207706_101682861	3300025933	Corn Rhizosphere	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAYGSEAERLFKAVNSITE
Ga0207679_118672901	3300025945	Corn Rhizosphere	GVGMNLEYCTQNRSESNLDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0207708_100392064	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDKNFMVNAYGSEAERLFKAVNSIME
Ga0207708_100395343	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VILTKYVTSYGDGITLEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0207674_101257523	3300026116	Corn Rhizosphere	LEYCTQNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAQRLFKAVNSITE
Ga0210000_10036332	3300027462	Arabidopsis Thaliana Rhizosphere	LEYCTQNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0209995_10226172	3300027471	Arabidopsis Thaliana Rhizosphere	LEYCTQNRSESNIDLTRDLQLITSEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYSMVNAHGSEAEILFKAVNSITE
Ga0209983_10044752	3300027665	Arabidopsis Thaliana Rhizosphere	MKQNITSGINLEDRAQRPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE
Ga0209819_101611512	3300027722	Freshwater Sediment	MKQNIVSRINLEYKTQKPNIFSIDLTRDLQPITIEDLVPQLRGKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGSEAERLFKAVHSISE
Ga0209974_100195062	3300027876	Arabidopsis Thaliana Rhizosphere	MKQNIASGINLEDRAQKSSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIQSISE
Ga0209481_100716602	3300027880	Populus Rhizosphere	VGINLEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHITVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE
Ga0209481_101554361	3300027880	Populus Rhizosphere	MTQDMVSRKNLEYKAQKSNISSIDLTRDLQPITIEDLVPQLRDKEYHFTVVPKDIMHMNNGVRHYYVEIQCDEGNFVVNAHGSEAERLFKAVHSISE
Ga0209481_104525072	3300027880	Populus Rhizosphere	MAQNTVSGINLEYKTQKPNISSIDSTRDLQPITIEDLVPQLRDKEYHFTVVPKNIMHMNNGIRHYYVEIQCDDGNLVLNAHGSEAERLFKAVHSISE
Ga0207428_105025632	3300027907	Populus Rhizosphere	MKQNIASGINLEDKDQKPSISNTDLRWDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCDEGNFIINAHGSEAERLFKVVHSIPE
Ga0209382_101419072	3300027909	Populus Rhizosphere	LEYKTQKPNISSIDLTRDLQPITIEDLVPQLREKEYHITVVPKDIMHLNNGIRHYYVEIQCEDGNFVVNAHGSEAERLFKAVHSISE
Ga0209382_112459901	3300027909	Populus Rhizosphere	MKQYIVSGINLEYKSQKPNISSIDLTRDLQPITIEDLVPQLRDKEYHFSVVPKDIMHMNNGIRHYYVEIQYDDGNFMINAYGSEAERLFKVVHSISE
Ga0209820_11584462	3300027956	Freshwater Sediment	LEHKTQKPNIFSIDLTRDLQPITIEDLVPQLRGKEYHFTVVPKDIMHMNNGIRHYYVEIQCDDGNFVVNAHGSEAERLFKAVHSISE
Ga0310888_100373753	3300031538	Soil	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDTEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEA
Ga0310888_108371252	3300031538	Soil	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGS
Ga0310887_100736093	3300031547	Soil	MKQNIASGINLEDKDQKPSISNIDLRGDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCYEGNFIINAHGSEAERLFKA
Ga0310887_101240402	3300031547	Soil	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDTEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310907_100138493	3300031847	Soil	MKQNIASGINLEDRAQKPSISNIDLLRDLQPTTIEDLVPQLREKEYQFTVVPKDIMHLNNGIKYYYVEIQCDEGNFIVNAHGSEAERLFKVIRSISE
Ga0310907_100411202	3300031847	Soil	LEYCTQKRSVSNIDLIKDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNLMINANGSNAERLFKAVNSITE
Ga0310892_102017322	3300031858	Soil	LEYCSQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310893_101815692	3300031892	Soil	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDSNFMINANGSDAERLFKAVNSITE
Ga0310900_100473023	3300031908	Soil	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310901_100006971	3300031940	Soil	LEYCTQKRSVSNIDLIRDPQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGVRYYYVEIQCDDSNFMINANGSDAERLFKA
Ga0310901_100222681	3300031940	Soil	QCIGVGINLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYHFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310884_106022352	3300031944	Soil	LEYCTQNRSESNIDLTRDLQLITIEDLIPQLREKKYHFTVVPKDIMYMRNGIRYYYVEIQCDDRNFMVNAYGSEAERLFKAVNSNPK
Ga0310899_100359771	3300032017	Soil	QCIGVGINLEYCTQNRSESNIDLTRDLQLITIEDLIPQLRDKEYQFTVVPKDIMYMHNGIRYYYVEIQCDDRYFMVNAHGSEAERLFKAVNSITE
Ga0310890_110834082	3300032075	Soil	MKQNIASGINLEDKDQKPSISNTDLRGDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCYEGNFIINAHGSEAERLFKVVHSIPE
Ga0310889_102172022	3300032179	Soil	MKQNIASGINLEDKDQKPSISNIDLRGDLQSITFEDLVPQLREKEYQFSVVPKDIMYMRNGIRYYYIEIQCDEGNFIINAHGSEAERLFKVVHSIPE
Ga0307471_1014165472	3300032180	Hardwood Forest Soil	LEYCTQKRNVTNIDLTRDPQLITIEDLIPQLRDKEYRFTIVPKEIMYMHNGIRYYYVEIQCDDGNYMVNAHGSDAERLFKAVNSNPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056884

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences