Metagenome / Metatranscriptome Family F056866

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056866
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	79 residues
Representative Sequence	LLALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTLLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLH
Number of Associated Samples	121
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.92 %
% of genes near scaffold ends (potentially truncated)	94.16 %
% of genes from short scaffolds (< 2000 bps)	89.78 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.620 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.139 % of family members)
Environment Ontology (ENVO)	Unclassified (22.628 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.985 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.50% β-sheet: 11.21% Coil/Unstructured: 67.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00296	Bac_luciferase	43.80
PF13193	AMP-binding_C	6.57
PF00550	PP-binding	3.65
PF00496	SBP_bac_5	2.92
PF13432	TPR_16	2.19
PF08448	PAS_4	2.19
PF13602	ADH_zinc_N_2	1.46
PF01833	TIG	1.46
PF13428	TPR_14	1.46
PF02894	GFO_IDH_MocA_C	0.73
PF12697	Abhydrolase_6	0.73
PF08240	ADH_N	0.73
PF02518	HATPase_c	0.73
PF09099	Qn_am_d_aIII	0.73
PF00076	RRM_1	0.73
PF08450	SGL	0.73
PF13801	Metal_resist	0.73
PF12680	SnoaL_2	0.73
PF02567	PhzC-PhzF	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	43.80
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.73
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.73
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.73
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.62 %
Unclassified	root	N/A	4.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.62 %
Unclassified	root	N/A	4.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.62 %
Unclassified	root	N/A	4.38 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	45.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.76 %
Unclassified	root	N/A	4.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.73 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	45.26 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.11 %
Unclassified	root	N/A	4.38 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.73 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	45.26 %
Unclassified	root	N/A	4.38 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.46 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.73 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	41.61 %
Unclassified	root	N/A	4.38 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.46 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	40.88 %
Unclassified	root	N/A	4.38 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.46 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	0.73 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0597272	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
2228664022\|INPgaii200_c1201488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	986	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0735839	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300000550\|F24TB_11138904	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300000550\|F24TB_11138905	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300000559\|F14TC_100414513	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10083206	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	800	Open in IMG/M
3300000787\|JGI11643J11755_11633434	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300000891\|JGI10214J12806_12472276	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300000955\|JGI1027J12803_102807275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	843	Open in IMG/M
3300000955\|JGI1027J12803_107493150	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300000956\|JGI10216J12902_120676365	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	844	Open in IMG/M
3300001431\|F14TB_101069062	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300004281\|Ga0066397_10105126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	597	Open in IMG/M
3300004479\|Ga0062595_101025057	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300004633\|Ga0066395_10608868	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	641	Open in IMG/M
3300005167\|Ga0066672_10346721	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005187\|Ga0066675_10748984	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005289\|Ga0065704_10231897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300005295\|Ga0065707_10050798	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300005295\|Ga0065707_10170701	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300005295\|Ga0065707_10319051	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300005332\|Ga0066388_104099249	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	743	Open in IMG/M
3300005336\|Ga0070680_100341686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1272	Open in IMG/M
3300005344\|Ga0070661_101564726	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005353\|Ga0070669_100132618	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300005364\|Ga0070673_101075796	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005441\|Ga0070700_101353194	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005467\|Ga0070706_100729477	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	918	Open in IMG/M
3300005526\|Ga0073909_10012458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2620	Open in IMG/M
3300005545\|Ga0070695_101808370	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005561\|Ga0066699_10232909	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300005576\|Ga0066708_10290499	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1046	Open in IMG/M
3300005764\|Ga0066903_104969046	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005876\|Ga0075300_1040702	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300006172\|Ga0075018_10330525	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	759	Open in IMG/M
3300006844\|Ga0075428_101501944	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300006852\|Ga0075433_10577637	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	987	Open in IMG/M
3300006854\|Ga0075425_100240231	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300006904\|Ga0075424_101837724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	640	Open in IMG/M
3300007076\|Ga0075435_100068775	All Organisms → cellular organisms → Bacteria	2886	Open in IMG/M
3300009148\|Ga0105243_11816650	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300009156\|Ga0111538_13141867	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300009177\|Ga0105248_13362389	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300009792\|Ga0126374_10276455	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300010046\|Ga0126384_10239970	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300010046\|Ga0126384_10383867	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1181	Open in IMG/M
3300010047\|Ga0126382_10884087	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	771	Open in IMG/M
3300010047\|Ga0126382_11444748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	630	Open in IMG/M
3300010047\|Ga0126382_12392333	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010303\|Ga0134082_10206069	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300010321\|Ga0134067_10176683	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	774	Open in IMG/M
3300010360\|Ga0126372_10125991	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300010360\|Ga0126372_12619089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300010362\|Ga0126377_11210120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	826	Open in IMG/M
3300010362\|Ga0126377_12241793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	622	Open in IMG/M
3300010362\|Ga0126377_12450743	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300010397\|Ga0134124_10104816	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2466	Open in IMG/M
3300010400\|Ga0134122_11045853	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	804	Open in IMG/M
3300012202\|Ga0137363_10451160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1076	Open in IMG/M
3300012203\|Ga0137399_11223995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300012207\|Ga0137381_10213480	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1673	Open in IMG/M
3300012410\|Ga0134060_1270012	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300012512\|Ga0157327_1073554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	535	Open in IMG/M
3300012896\|Ga0157303_10279307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300012912\|Ga0157306_10072376	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300012971\|Ga0126369_12589359	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300012986\|Ga0164304_10132278	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1544	Open in IMG/M
3300013297\|Ga0157378_10706050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1028	Open in IMG/M
3300014154\|Ga0134075_10176780	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300014881\|Ga0180094_1077335	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	743	Open in IMG/M
3300015052\|Ga0137411_1165313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1303	Open in IMG/M
3300015259\|Ga0180085_1253454	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300015359\|Ga0134085_10626373	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300015372\|Ga0132256_103711265	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300015373\|Ga0132257_100291354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1959	Open in IMG/M
3300015373\|Ga0132257_100333605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1829	Open in IMG/M
3300015374\|Ga0132255_100227340	All Organisms → cellular organisms → Bacteria	2655	Open in IMG/M
3300016357\|Ga0182032_11611152	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300016371\|Ga0182034_11249583	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	647	Open in IMG/M
3300016404\|Ga0182037_11286694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300016445\|Ga0182038_10882480	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	787	Open in IMG/M
3300017659\|Ga0134083_10123877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1033	Open in IMG/M
3300017944\|Ga0187786_10320974	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300018029\|Ga0187787_10002597	All Organisms → cellular organisms → Bacteria	3991	Open in IMG/M
3300018058\|Ga0187766_10728972	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300018058\|Ga0187766_11420597	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300018060\|Ga0187765_10349903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	899	Open in IMG/M
3300018431\|Ga0066655_10772253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300018468\|Ga0066662_11582441	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300019789\|Ga0137408_1051514	All Organisms → cellular organisms → Bacteria	3638	Open in IMG/M
3300025941\|Ga0207711_10362408	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300026035\|Ga0207703_11620286	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300026313\|Ga0209761_1236954	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	743	Open in IMG/M
3300026334\|Ga0209377_1306310	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300026523\|Ga0209808_1103530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1198	Open in IMG/M
3300026550\|Ga0209474_10111382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1828	Open in IMG/M
3300027277\|Ga0209846_1051260	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027909\|Ga0209382_10444273	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300027950\|Ga0209885_1030911	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300027961\|Ga0209853_1149001	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	567	Open in IMG/M
3300031545\|Ga0318541_10296472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	901	Open in IMG/M
3300031564\|Ga0318573_10240986	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	963	Open in IMG/M
3300031679\|Ga0318561_10757057	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031680\|Ga0318574_10112375	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1521	Open in IMG/M
3300031720\|Ga0307469_10968452	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	792	Open in IMG/M
3300031720\|Ga0307469_12374943	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031740\|Ga0307468_101154522	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300031771\|Ga0318546_10021720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3682	Open in IMG/M
3300031795\|Ga0318557_10282146	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	762	Open in IMG/M
3300031819\|Ga0318568_10327947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	951	Open in IMG/M
3300031820\|Ga0307473_10726137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	700	Open in IMG/M
3300031847\|Ga0310907_10324509	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	782	Open in IMG/M
3300031892\|Ga0310893_10414672	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300031894\|Ga0318522_10212831	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300031947\|Ga0310909_10173407	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1783	Open in IMG/M
3300031947\|Ga0310909_10210489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1618	Open in IMG/M
3300031965\|Ga0326597_10831284	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300032017\|Ga0310899_10357092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M
3300032044\|Ga0318558_10128808	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1205	Open in IMG/M
3300032052\|Ga0318506_10076054	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1401	Open in IMG/M
3300032054\|Ga0318570_10447836	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300032174\|Ga0307470_11171265	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	622	Open in IMG/M
3300032180\|Ga0307471_101407575	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300032205\|Ga0307472_102280562	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300032205\|Ga0307472_102573632	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300032211\|Ga0310896_10075146	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1445	Open in IMG/M
3300032261\|Ga0306920_100451075	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300032782\|Ga0335082_11051914	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300033289\|Ga0310914_10800404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	841	Open in IMG/M
3300033290\|Ga0318519_10447958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	773	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.21%
Host-Associated	Host-Associated	16.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.02%
Plants	Host-Associated → Plants	16.79%
Aquatic	Environmental → Aquatic	2.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.38%
Sediment	Environmental → Aquatic → Sediment	2.19%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.49%
Loam	Environmental → Terrestrial → Soil → Loam	8.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.19%
Sand	Environmental → Terrestrial → Soil → Sand	2.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.19%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.19%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.19%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.73%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027950	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_05972722	2228664021	Soil	VLKPGVRRLPLRGADLVLMAHHPRWKGVGLGHNTLLVVECDGPIESDRVARAWDRFLDVCPWPAARLRRP
INPgaii200_12014883	2228664022	Soil	MPSLRLLPRRMRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERITRAWDRFLDVCPWPAARL
ICChiseqgaiiDRAFT_07358391	3300000033	Soil	VXKPGVRRLPLRGADLVLMAHHPRWKGVGLGHNTLLVVECDGPIESDRVARAWDRFLDVCPWPAARLRRPFPWGKLHWTAGARASL
F24TB_111389042	3300000550	Soil	MPILSLRPRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERMERALDRFLDVCPW
F24TB_111389051	3300000550	Soil	MPTLSLLPRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERMERALDRLLDVCPWPAARLRRPFPWGK
F14TC_1004145132	3300000559	Soil	VLKPGVRRLPLRGADLVLMAHHPRWKGVGLGHNTLLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGDRA
AF_2010_repII_A1DRAFT_100832061	3300000597	Forest Soil	VPALNRHVRRLPLRGADLVLLAHHPRWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWA
JGI11643J11755_116334341	3300000787	Soil	VLKPGVRRLPLRGADLVLMAHHPRWKGVGLGHNTLLVVECDGPIESDRVARAWDRFLDVCPWP
JGI10214J12806_124722761	3300000891	Soil	VRRLPLRGADVVLMAHHPRWNGVGLGHNTILVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGK
JGI1027J12803_1028072752	3300000955	Soil	VPTLNRDVRRLPLRGADLVLLARHPRWKGVGLDHNTMLVVECDGPIAPERITRAWDRFLDVCPWPAARLRRPFPWGKLHWAAGTR
JGI1027J12803_1074931502	3300000955	Soil	VRRLPLRGADVVLMAHHPRWNGVGLGHNTILVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAA
JGI10216J12902_1206763652	3300000956	Soil	MPALKRHVRRLPLRGADLVLLAHHPRWKGVGLGHNTMLVVECDGPIASDRIARAWDRFLDVCPWPAARLRRPFPWG
F14TB_1010690621	3300001431	Soil	VFKPGVRRLPLRGADLVLMAHHPRWNGVGLGHNTILVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGDRA
Ga0066397_101051261	3300004281	Tropical Forest Soil	MPTLSLLPRRVRRLPLRGADLVLMARHPLWKGIGLSSNTALVVECDGPIAPERMERALDRLLDVCPWPAA
Ga0062595_1010250572	3300004479	Soil	VMRAACPPTVPDVSALRGGVRRLPLRGADLVLMARHPRWKGTGLNNNTLLAIELDGPIAPQRITRALDRLLDVCPWPAA
Ga0066395_106088682	3300004633	Tropical Forest Soil	MRNGHVRRLPLRGADLVLMAHHPRWKGVRLGHNTMLVVECDGPIESNRIERAWDRFLDACPWPASRLRRPFPWGKLYWAAG
Ga0066672_103467211	3300005167	Soil	VPALKRDVRRLPLRGADLVLLARHPRWKGLGLDHNTMLVVECDGPIDPDRITRAWDRFLDVCPWPAAR
Ga0066675_107489841	3300005187	Soil	VRTRRLPLRGADLVLMAMHCLWRDAKVSHNTILVVQCDGPIEPERTRRAIDRLLDLCPWPASRLRRP
Ga0065704_102318972	3300005289	Switchgrass Rhizosphere	VFKPGVRRLPLRGADLVLMAHHPRWKGVGLGHNTLLVVECDGPIESDRIARAWDRFLDVCPWPAA
Ga0065707_100507981	3300005295	Switchgrass Rhizosphere	VRRLPLRGADLVLMARHPRWKGTGLNNNTLLAIELDGPVASERITRALDRLLDVCPWPAARLRRPFPWGRLHWAAG
Ga0065707_101707011	3300005295	Switchgrass Rhizosphere	MPILSLRPRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERVERALDRFLDVCPWPA
Ga0065707_103190512	3300005295	Switchgrass Rhizosphere	VFKPGVRRLPLRGADLVLMAHHPRWKGVGLGHNTLLVVECDGPIESDRIARAWDRFLDVCPWP
Ga0066388_1040992492	3300005332	Tropical Forest Soil	VPGRNRRVRRLALRGADLVLLAHHPQWQGVGLGHNTLLVVECDGLLDAERIARAWDRLLDVCPWPAARLRRPFPWGKLHWA
Ga0070680_1003416862	3300005336	Corn Rhizosphere	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGRIDASRITRAWDRFLDVCPWPSARLTRPFPWGKLHW
Ga0070661_1015647262	3300005344	Corn Rhizosphere	VRRLSLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGRLDADRITRAWDRFLDVCPWPAARLQRPFPWGKLHWVAGARGTLERPPL
Ga0070669_1001326184	3300005353	Switchgrass Rhizosphere	MPILSLRPRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERMERALDRFLDVCPWPAARLRRPFPWGKLH
Ga0070673_1010757961	3300005364	Switchgrass Rhizosphere	VRRLPLRGADLVLMARHPRWKGTGLNNNTLLAIELDGPVASERITRALDRLLDVCPWPAARLRRPFPWGRLHWAAGPRETL
Ga0070700_1013531941	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPILSLRPRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERMERALDRFLDVCPWPAARLRRPFPW
Ga0070706_1007294771	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VAALKRDVRRLPLRGADLVLLARHPRWKGVGLDHNTMLVVECDGPIDSERIGRAWDRFLDVCPWPAARLRRPFPWGKLHWAAGSRETLSRPP
Ga0073909_100124581	3300005526	Surface Soil	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGRIDASRITRAWDRFLDVCPWPSARLTRPFPWGKLHWVAGARETLERPSLRRVTI
Ga0070695_1018083701	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGRIDASRITRAWDRFLDVCPWPSARLTRPFPW
Ga0066699_102329091	3300005561	Soil	MPGRRLPLRGADLVLIAMHSLCKGRDVSSNTLLVVECDGPIAPERIRRTLDRLLDFCPWPAARLRRPFPWGRL
Ga0066708_102904992	3300005576	Soil	VPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTLLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGARE
Ga0066903_1049690462	3300005764	Tropical Forest Soil	VSGLGRGVRRLPLRGADLVLMARDPRWKSGRLSNNTLVAVELDGPVARAQVAHAVERLLDVCPWPAARLRRPFPWGRLHWAAGPRETLSS
Ga0075300_10407022	3300005876	Rice Paddy Soil	MAAKPMSQRARRLPLRGADLVLMARHPRWKDVGLSHNALLVVECDGTVGAERIARALERFLDACPWPAARLRRPFPWGGLEW
Ga0075018_103305252	3300006172	Watersheds	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGRIDANRITSAWDRFLDVCPWPSARLTRPFPWGKLHWV
Ga0075428_1015019441	3300006844	Populus Rhizosphere	MPSLRLLPRRMRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIARERMERALDRLLDVCPWPAARLRRPFPWGKLHWAAGDRAELI
Ga0075433_105776371	3300006852	Populus Rhizosphere	VPALNRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGPIDSTRIARAWDRFLDVC
Ga0075425_1002402311	3300006854	Populus Rhizosphere	MPSLRLLPRRMRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIARERMERALDRLLDVCPWPAARLRRPFPWGKLHWAAGDRAELIRPP
Ga0075425_1006514141	3300006854	Populus Rhizosphere	MPILSLRSRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERVERALDRFLDVCPWPAARLRRPFPWGKLHWAAGDRAELTRPPVRRDTVA
Ga0075429_1016365401	3300006880	Populus Rhizosphere	VPSSKRHVRRLPLRGADLVLLAHHPRWTGVGLGHNTMLVVECDGPIAQERIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGGRETLTRPPLRRITI
Ga0075424_1018377242	3300006904	Populus Rhizosphere	VLLAHHPRWKGVGLGHNTSLVVECDGRLDGDRITRAWDRFLDVCPWPAARLQRPFPWGKLRWVAGTRDTLERPPLRRTTITA
Ga0075435_1000687751	3300007076	Populus Rhizosphere	MRHTRVRRLPLRGADVVLMAQHPRWQGVGLGHNTMLVVECDGLIESDRIERAWDRFLDVCPWPAARLRRPFPWGKLHWAAGPR
Ga0105243_118166502	3300009148	Miscanthus Rhizosphere	MPILSLRPRRVRRLPLRGADLVLMARNPLWKGIGLSSNTSLVVECDGPIAPERMERALDRFLDVCPWPAARLRRR*
Ga0111538_131418671	3300009156	Populus Rhizosphere	MRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIARERMERALDRLLDVCPWPA
Ga0105248_133623892	3300009177	Switchgrass Rhizosphere	MARHPRWKGTGLNNNTLLAIELDGPIAPQRITRALDRLLDVCPWPAARLRRPFPWGRLHWAAGPRETLSR
Ga0126374_102764551	3300009792	Tropical Forest Soil	VLQRGVRRLPLRGADLVLMAHHPRWKGVGLGHNTLLAVECDGPIESERLACAWDRFLDVCPWPAARLRRPFPWGKLHWAAGVRAS
Ga0126384_102399704	3300010046	Tropical Forest Soil	MRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPITRERMERALDRLLDVCPWPAARLRRPFPWGKLHWAAGDRAELTR
Ga0126384_103838672	3300010046	Tropical Forest Soil	VPALTRDVRRLPLRGADLVLLAHHPRWKGVGRDHNTMLVVECDGPLESDRIARAWDRFLDVCPWPAA
Ga0126382_108840871	3300010047	Tropical Forest Soil	MLALKRHVRRLPLRGADLVLLAHHPRWKGVGLGHNTMLVVECDGTIPSDRIAHAWDRFLDVCPWPAARLRRPFPW
Ga0126382_114447482	3300010047	Tropical Forest Soil	LRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERVEQALDRFLDVCPWPAARL
Ga0126382_123923332	3300010047	Tropical Forest Soil	MRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPITRERMERALDRLLDVCPWPAARLRRPFPWG
Ga0134082_102060693	3300010303	Grasslands Soil	MPGRRLPLRGADLVLIAMHSLCKGRDVSSNTLLVVECDGPIAPERIRRALDRLLDFCPWPAARLRRPF
Ga0134067_101766832	3300010321	Grasslands Soil	VAALKRDVRRLPLRGADLVLLARHPRWKGVGLDHNTMLVVECDGPIDPDRITRACDRFLDVCPWPAARLRRPFPWGKLHWAAGSRETLSRPPLRRATI
Ga0126370_115287082	3300010358	Tropical Forest Soil	MAHHPRWKGVGLGHNTLLAVECDGPIESERLACAWDRFLDVCPWPAARLRRPFPWGKLHWAAGVRASLARPPLRRVTIATRAAL
Ga0126372_101259911	3300010360	Tropical Forest Soil	LRGADLVLMARHPLWKGIGLSSNTSLVVECEGPIAPERVEQALDRLLDVCPWPAARLRRPFPWGKLHWAAGDRSALT
Ga0126372_126190892	3300010360	Tropical Forest Soil	VPALNRDVRRLPLRGADLVLLAHHPRWKGVGRNHNTMLVVECDGPIESDRIARAWDRFLDVCPW
Ga0126377_112101202	3300010362	Tropical Forest Soil	MPTLRLLPRHVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIARERMERALDRLLDVCPWPAARLRRPFPWG
Ga0126377_122417932	3300010362	Tropical Forest Soil	MIMPALKRHVRRLPLRGADLVLLAPHPRWKGVGLGHNTMLVVECDGPIASDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWVAGSRQSLERPAVRRAA
Ga0126377_124507431	3300010362	Tropical Forest Soil	MTVPLSKRDVRRLPLRGADLVLLAHHPRWKGVGLDHNTMLVVECDGPIAPERIGCAWDQFLDVCPWPAARLRRPFPWGKLHWAAGARDTLTRPPL
Ga0134124_101048164	3300010397	Terrestrial Soil	VLLAHHPRWKGVGLGHNTSLVVECDGRLDADRITRAWDRLLDVCPWPAARLQRPFPWGKLQWVAGARGTLERPPLRRATITGPGEL
Ga0134122_110458531	3300010400	Terrestrial Soil	MSVPSSKRHVRRLPLRGADLVLLAHHPRWKGVGLGHNTMLVVECDGPIAQERIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGPRDRLVAP
Ga0137363_104511602	3300012202	Vadose Zone Soil	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECEGRIDASRITRAWDRFLDVCPWPS
Ga0137399_112239952	3300012203	Vadose Zone Soil	VPALKRDLRRLPLRGADLVLLAHHPRWKGVGLGHNTLLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWA
Ga0137381_102134801	3300012207	Vadose Zone Soil	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECEGRIDASRITRAWERFLDVCP
Ga0134060_12700122	3300012410	Grasslands Soil	LLALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTLLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLH
Ga0157327_10735541	3300012512	Arabidopsis Rhizosphere	VLLAHHPRWKGVGLGHNTSLVVECDGRLDADRITRAWDRFLDVCPWPAARLQRPFPWGKLHWVAGARDALERPPLRRTTIAAPGEL
Ga0157303_102793072	3300012896	Soil	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGQGHNTSLVVECDGRIDASRITRAWDRFLDVCPWP
Ga0157306_100723761	3300012912	Soil	LRGADLVLMARHPRWKGTGLNNNTLLAIELDGPVASERITRALDRLLDVCPWPAARLRRPFPWGRLHWAAGPRETLRRPL
Ga0126369_125893591	3300012971	Tropical Forest Soil	VPALKRDVRRLPLRGADLVLLAHHPRWKGVGRDHNTMLVVECDGPIESDRLAPAWDRFLDVCP*
Ga0164304_101322781	3300012986	Soil	LPALKRDVRRLPLRGADLVLMAHHPRWKGVGLGHNTSLVVECDGRIDANRITRAWDRFLDVCPWPSARLTRPFP
Ga0157378_107060502	3300013297	Miscanthus Rhizosphere	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGRIDASRITRAWDRFLDVCPWPSARLTRPFPWGKLHWVAGARETLE
Ga0134075_101767801	3300014154	Grasslands Soil	MARHPLWKGVGLSSNTSLVVECDGPIAPERVERALDRFLDVCPWPAARLRRPFPWGKLHWAARGRSELTRPPVRRETIAAREE
Ga0180094_10773351	3300014881	Soil	MARHPCWKGVGASHNTFLVVECDGPIASERITIALNRFLDVCPWPAARLRRPFPWGKLHWVAGPRATLTCPPV
Ga0137411_11653133	3300015052	Vadose Zone Soil	MARHPLWKGVGLSSNTSLVVECDGPIAPERVERALDRFLDVCPWPAARLRRPFPWGKLHWAARGRSELTRPPLRRETVAAREEFAR
Ga0180085_12534541	3300015259	Soil	LRGADLVLMARHPRWKGVGGSHNTLLVVECDGPIASERITIALNRFLDVCPWPAARLRRPFPWGK
Ga0134085_106263732	3300015359	Grasslands Soil	MASRLARRSGSVRVRRLPLRGADLVLLAMQCLWTGAKVSHNTILVVQCDGLLAPARVRRALDRFLECCPWPASRLR
Ga0132256_1037112651	3300015372	Arabidopsis Rhizosphere	MPILSLRSRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERVERALDRFLDVCP
Ga0132257_1002913541	3300015373	Arabidopsis Rhizosphere	MSVLSSKRHVRRLPLRGADLVLLAHHPRWKGVGLGHNTMLVVECDGPIAQERIARAWDRFLDVCPWPAARLRRPFPWGK
Ga0132257_1003336052	3300015373	Arabidopsis Rhizosphere	MMRSTRVRRLPLRGADVVLMAHHPRWQGVGLGHNTMLVVECDGPIESDRVEHAWDRFLDVCPWPA
Ga0132255_1002273401	3300015374	Arabidopsis Rhizosphere	MMRSTRVRRLPLRGADVVLMAHHPRWQGVGLGHNTMLVVECDGPIESDRIEHAWDRFLDVCPWPAARLRRPFPWGRLHWAAG
Ga0182032_116111522	3300016357	Soil	LLCVIQFGWRTCSVLQRGVRRLPLRGADLVLMAHHPRWKGVGLGHNTLLAVECDGPIESERLACAWDRFLDVCPWP
Ga0182034_112495831	3300016371	Soil	MMRNEPVRRLSLRGADVVLMAHHPRWKGVGLGHNTMLVVECDGPLESDRIERAWDRFLDVCPWPAARLRRPFPW
Ga0182037_112866941	3300016404	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCP
Ga0182038_108824801	3300016445	Soil	MRNEPVRRLPLRGADVVLMAHPPRWKGVGLGHNTMLVVECDGPLESDRIERAWDRFLDVCPWPAARLRRPFPWGKLYWAAGPRPSLAR
Ga0134083_101238771	3300017659	Grasslands Soil	MPTLSLLRRNVRRLPLRGADLVLMARHPLWKGVGLSSNTSLVVECDGPIGPERVERALDRFLDVCPWPAARLRRPFPWGKLHWPS
Ga0187786_103209741	3300017944	Tropical Peatland	VRRLRLRGADLVLLARHPGWKGVGLGHNTLLVVECDGLIDADRVGRAWDRFLDVCPWPAARLRRPFPWGKLHWVAGARDALERPPLRRVA
Ga0187787_100025976	3300018029	Tropical Peatland	MAHHPRWTGVGLGHNTLLVVECDGPIESDRIARAWDCFLDVCPWPAARLRRPFPWGKLHWAAGPRASLTRPPLR
Ga0187766_107289722	3300018058	Tropical Peatland	LSAEGPVLARFGASRLALGGADLVLMAMHSPWKGAGRSNNALLVVQLDGRIAPDRVGAALARFLDVCPWPAARLRRFP
Ga0187766_114205971	3300018058	Tropical Peatland	VTSVLLHRARRLPLRGADLVLMAGLRPWKGVRPNPNTLLVVECDGLVPAERITRAVDRLLDVCPWPAARLRRQLPWGRLQWVAGPRATLRRPLVRREVV
Ga0187765_103499031	3300018060	Tropical Peatland	MRNPGVRRLPLRGADVVLMAHHPRWKGVGLGHNTMLVVECDGPLESDRIARAWDRFLDVCPWPAARLRRPFPWGKLYWAAGPRPSLARPPLRRAT
Ga0066655_107722532	3300018431	Grasslands Soil	VAALKRDVRRLPLRGADLVLLARHPRWKGVGLDHNTMLVVECNGPIDAERITRAWDRFLDVCPWPAARLRRPFPWGKLHWAAGSR
Ga0066662_115824411	3300018468	Grasslands Soil	VAALKRDVRRLPLRGADLVLLARHPRWKGVGLDHNTMLVVECDGPIDAERITRAWDRFLDVCPWPAARLRRPFPWGKLHWAAGSRETLSRPPL
Ga0137408_10515141	3300019789	Vadose Zone Soil	MPTLSLLRRNVRRLPLRGADLVLMARHPLWKGVGLSNNTSLVVECDGPIAPERVERALDRFLDVCPWPAARLRRPFP
Ga0207711_103624082	3300025941	Switchgrass Rhizosphere	VRRLPLRGADLVLMARHPRWKGTGLNNNTLLAVELDGPIACQRITRALDRLLDVCPWPAARLRRPFPWGRLHWAAG
Ga0207703_116202861	3300026035	Switchgrass Rhizosphere	VMRPACPPTVPDVRALRRGVRRLPLRGADLVLMARHPRWKGAGLNNNTLLAIELDGPIARQRITRALDRLLDVCPWPAARLRRPFPWGRLHWAAGPRETLRRPL
Ga0209761_12369542	3300026313	Grasslands Soil	LGESRATARRRGVRRLSLRGADLVLMARHPRWKGVGLSHNTLLVVECDGPIASERITRAFDRFLDVCPWPAARLRRFPWGKLHWAAGARQ
Ga0209377_13063102	3300026334	Soil	MPTLSLLRRNVRRLPLRGADLVLMARHPLWKGVGLSSNTSLVVECDGAITPERVERALDRFLDVCPWPAA
Ga0209808_11035302	3300026523	Soil	VPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTLLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGARES
Ga0209474_101113823	3300026550	Soil	VAALKRDVRRLPLRGADLVLLARHPRWKGVGLDHNTMLVVECDGPIDAERITRAWDRFLDVCPWPAARLRRPFPWG
Ga0209846_10512602	3300027277	Groundwater Sand	MARHPRWKGVGLSRNTLLVVECDGPIATERISRALDRFLDVCPWPAARLRRPFPWGKLHWAAGPREVLTRPPLR
Ga0209382_104442734	3300027909	Populus Rhizosphere	MPILSLRPRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERMERALDRFLDVCPWPAARLRRPFPWGKLHWAAGDRAELT
Ga0209885_10309112	3300027950	Groundwater Sand	VHRLALGGPDLVLMARHPRWKATAPSINTLLVVECDGPVPPERIGRALDRFLDVCPWPAARLRRPFPWGKLHWAA
Ga0209853_11490011	3300027961	Groundwater Sand	VSARGRTVRRLALGGPDLVLMARHPRWKAMPPSINTLLVVECDGPVPPERIGRALDRFLDVCPWPAARLRRPF
Ga0318516_101567511	3300031543	Soil	MPGKPRHSRAPVPARNRRVRRLPLRGADLVLLAHHPLWKDVGLGHNTLLIVECDGLLDANRIGRAWDRLLDVCPWPAA
Ga0318541_102964722	3300031545	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPW
Ga0318573_102409861	3300031564	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGARASLARPAVRRRPS
Ga0318561_107570572	3300031679	Soil	MRNEPVRRLSLRGADVVLMAHHPRWKGVGLGHNTMLVVECDGPLESDRIERAWDRFLDVCPWPAARLRRPFPWGKLYWAA
Ga0318574_101123752	3300031680	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGARAS
Ga0307469_109684522	3300031720	Hardwood Forest Soil	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGRIDANHITRAWDRFLDVCPWPSARLTR
Ga0307469_123749432	3300031720	Hardwood Forest Soil	MPTLSLLPRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERMERALDRLLDVCPWPAARLRRPFPW
Ga0307468_1011545221	3300031740	Hardwood Forest Soil	MPTLSLSRRSVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAAERMERALDRLLDVCPWPAARLRRPFPWGKLHWAAGDRSELTR
Ga0318502_106658541	3300031747	Soil	MPGKPRHSRAPVPARNRRVRRLPLRGADLVLLAHHPLWKDVGLGHNTLLIVECDGLLDANRIGRAWDRLL
Ga0318546_100217205	3300031771	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGARASLARPAAQW
Ga0318557_102821461	3300031795	Soil	VPALNRDVRRLLLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLH
Ga0318568_103279471	3300031819	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVC
Ga0307473_107261372	3300031820	Hardwood Forest Soil	MPILSLRPRRVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERMERALDRFLDVCPWPAARLRRPFPWGKLHWAA
Ga0310907_103245092	3300031847	Soil	LPALKRDVRRLPLRGADLVLMAHHPRWKGVGLGHNTSLVVECDGRIDANRITRAWDRFLDVCPWPSARLTRPVPWGKLLWVAGARETL
Ga0310893_104146721	3300031892	Soil	LPALKRDVRRLPLRGADLVLMAHHPRWKGVGLGHNTSLVVECDGRIDANRITRAWDRFLDVCPWPSARLTRPFPWGKLHWVAGARETLERPSLRRVTI
Ga0318522_102128312	3300031894	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAGARASLARPAVRRTT
Ga0310916_103129871	3300031942	Soil	MPGKPRHSRAPVPARNRRVRRLPLRGADLVLLAHHPLWKDVGLGHNTLLIVECDGLLDANRIGR
Ga0310909_101734071	3300031947	Soil	MPGKPRHSRAPVPARNRRVRRLPLRGADLVLLAHHPLWKDVGLGHNTLLIVECDGLLDANRIGRAWDRLLDVCPWPAARLR
Ga0310909_102104891	3300031947	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARL
Ga0326597_108312841	3300031965	Soil	VPGRRLPLRGADLVLIAMQWLWKPAEVSNNTLLVVQCDGPIAPERIRRALDRFLDFCPWPAARLRRAFPW
Ga0310899_103570922	3300032017	Soil	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGRIDANRITRAWDRFLDVCPWPSARLTRPF
Ga0318558_101288081	3300032044	Soil	MPGKPRHSRAPVPARNRRVRRLPLRGADLVLLAHHPLWKDVGLGHNTLLIVECDGLLDANRIGRAWDRLLDVCPWPAARLRRPFPWGKLH
Ga0318506_100760542	3300032052	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLHWAAG
Ga0318570_104478362	3300032054	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPWPAARLRRPFPWGKLH
Ga0307470_111712651	3300032174	Hardwood Forest Soil	LPALKRDVRRLPLRGADLVLLAHHPRWKGVGLGHNTSLVVECDGRIDANRITRAWDRFLDVCPWPSARLTRPFPRGKLHWVAGERETLER
Ga0307471_1014075751	3300032180	Hardwood Forest Soil	MPTLSLLRRNVRRLPLRGADLVLMARHPLWKGIGLSSNTSLVVECDGPIAPERVERALDRFLDVCPWPAARLRRPFPWGKLHWAA
Ga0307472_1022805622	3300032205	Hardwood Forest Soil	VGLGHNTSLVVECDGRIDANRITRAWDRFLDVCPWPSARLTRPFPWGKLHWVAGARETLERPSLRRVTIT
Ga0307472_1025736322	3300032205	Hardwood Forest Soil	MRSARVRRLPLCGADVVLMAQHPRWQGVGLGHNTMLVVECDGPIESDRIERAWDRFLDVCPWPASR
Ga0310896_100751462	3300032211	Soil	LPALKRDVRRLPLRGADLVLMAHHPRWKGVGLGHNTSLVVECDGRIDANRITRAWDRFLDVCPWPSARLTRPFPWGKLHWVAGARETLERPSL
Ga0306920_1004510751	3300032261	Soil	MRNEPVRRLPLRGADVVLMAHHPRWKGVGLGHNTMLVVECDGPLESDRIQRAWDRFLDVCPWPA
Ga0335082_110519141	3300032782	Soil	MPRWPARAPVSPTMRRLPLRGADLVQLATPPRWKSTARSHNTCLVVEFDGAIDPARIGRALDRFLDVCPWPAARLRRPFPWGALHWAAGERDQL
Ga0310914_108004042	3300033289	Soil	MMRNEPVRRLPLRGADVVLMAHHPRWKGVGLGHNTMLVVECDGPLESDRIERAWDRFLDVCPWPAARLRRPFPWGKLYW
Ga0318519_104479581	3300033290	Soil	VPALNRDVRRLPLRGADLVLLAHHPSWKGVGRDHNTMLVVECDGPIESDRIARAWDRFLDVCPW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056866

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences