Metagenome / Metatranscriptome Family F056842

Basic Information
Family ID	F056842
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	76 residues
Representative Sequence	VRAIGGGGLGMLVFLQRWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYISSSEEMRALLAYANSGYALAA
Number of Associated Samples	124
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.89 %
% of genes near scaffold ends (potentially truncated)	87.59 %
% of genes from short scaffolds (< 2000 bps)	85.40 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Bacteria (81.752 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.168 % of family members)
Environment Ontology (ENVO)	Unclassified (23.358 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.905 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.37% β-sheet: 8.08% Coil/Unstructured: 54.55%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00072	Response_reg	5.11
PF01165	Ribosomal_S21	2.19
PF13519	VWA_2	1.46
PF04972	BON	1.46
PF13924	Lipocalin_5	0.73
PF00857	Isochorismatase	0.73
PF11199	DUF2891	0.73
PF13007	LZ_Tnp_IS66	0.73
PF01544	CorA	0.73
PF03707	MHYT	0.73
PF16640	Big_3_5	0.73
PF00589	Phage_integrase	0.73
PF13431	TPR_17	0.73
PF13466	STAS_2	0.73
PF13545	HTH_Crp_2	0.73
PF05977	MFS_3	0.73
PF05717	TnpB_IS66	0.73
PF00534	Glycos_transf_1	0.73
PF01979	Amidohydro_1	0.73
PF06210	DUF1003	0.73
PF00092	VWA	0.73
PF05532	CsbD	0.73
PF00756	Esterase	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	2.19
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.73
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.73
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.73
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.73
COG3300	MHYT domain, NO-binding membrane sensor	Signal transduction mechanisms [T]	0.73
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.73
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.73
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.73

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.75 %
Unclassified	root	N/A	18.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.75 %
Unclassified	root	N/A	18.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.75 %
Unclassified	root	N/A	18.25 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	70.80 %
Unclassified	root	N/A	18.25 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.01 %
Unclassified	root	N/A	18.25 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.38 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.01 %
Unclassified	root	N/A	18.25 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.92 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.01 %
Unclassified	root	N/A	18.25 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.19 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.73 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.73 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.01 %
Unclassified	root	N/A	18.25 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.19 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.73 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.01 %
Unclassified	root	N/A	18.25 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.19 %
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	0.73 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.01 %
Unclassified	root	N/A	18.25 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.19 %
Desulfovibrio vulgaris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → Desulfovibrio vulgaris	0.73 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103651124	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300001131\|JGI12631J13338_1020641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300002245\|JGIcombinedJ26739_100230873	All Organisms → cellular organisms → Bacteria → Acidobacteria	1741	Open in IMG/M
3300005329\|Ga0070683_100322284	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300005330\|Ga0070690_100909748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300005338\|Ga0068868_101384767	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005338\|Ga0068868_102378558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300005434\|Ga0070709_11258879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005544\|Ga0070686_101245016	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300005546\|Ga0070696_101142629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300005610\|Ga0070763_10370051	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300005610\|Ga0070763_10880090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio → Desulfovibrio vulgaris	532	Open in IMG/M
3300005617\|Ga0068859_100069804	All Organisms → cellular organisms → Bacteria	3549	Open in IMG/M
3300005618\|Ga0068864_101492775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300005921\|Ga0070766_10022820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3341	Open in IMG/M
3300005950\|Ga0066787_10082316	Not Available	663	Open in IMG/M
3300005952\|Ga0080026_10007218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2593	Open in IMG/M
3300005995\|Ga0066790_10020511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2888	Open in IMG/M
3300006028\|Ga0070717_10723744	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300006041\|Ga0075023_100160230	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300006173\|Ga0070716_100330691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300006176\|Ga0070765_100821288	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300006358\|Ga0068871_100867819	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300006640\|Ga0075527_10054940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300006642\|Ga0075521_10509740	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300006893\|Ga0073928_10434743	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300006893\|Ga0073928_10600105	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300006931\|Ga0097620_100069798	All Organisms → cellular organisms → Bacteria	3549	Open in IMG/M
3300009038\|Ga0099829_10569909	Not Available	941	Open in IMG/M
3300009093\|Ga0105240_11103366	Not Available	844	Open in IMG/M
3300009098\|Ga0105245_10039360	All Organisms → cellular organisms → Bacteria → Acidobacteria	4208	Open in IMG/M
3300009098\|Ga0105245_12487068	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300009177\|Ga0105248_12719969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300009552\|Ga0116138_1144092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300009762\|Ga0116130_1223975	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300010373\|Ga0134128_10162474	All Organisms → cellular organisms → Bacteria → Acidobacteria	2524	Open in IMG/M
3300011120\|Ga0150983_10951848	All Organisms → cellular organisms → Bacteria → Acidobacteria	1166	Open in IMG/M
3300012004\|Ga0120134_1068367	Not Available	637	Open in IMG/M
3300012207\|Ga0137381_11643344	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300012469\|Ga0150984_116763560	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300012955\|Ga0164298_10507467	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300012957\|Ga0164303_10088998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1496	Open in IMG/M
3300012986\|Ga0164304_10143141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1495	Open in IMG/M
3300013296\|Ga0157374_10092032	All Organisms → cellular organisms → Bacteria	2893	Open in IMG/M
3300013297\|Ga0157378_10026602	All Organisms → cellular organisms → Bacteria	5098	Open in IMG/M
3300013297\|Ga0157378_11150328	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300014058\|Ga0120149_1160346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300014164\|Ga0181532_10549581	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300014169\|Ga0181531_10456778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300014489\|Ga0182018_10068453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2127	Open in IMG/M
3300014501\|Ga0182024_10655243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1304	Open in IMG/M
3300016750\|Ga0181505_10634234	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300017948\|Ga0187847_10097041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1629	Open in IMG/M
3300018004\|Ga0187865_1181675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300018006\|Ga0187804_10399115	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300018009\|Ga0187884_10273828	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300018025\|Ga0187885_10527509	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300018034\|Ga0187863_10054019	All Organisms → cellular organisms → Bacteria → Acidobacteria	2292	Open in IMG/M
3300018038\|Ga0187855_10449052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300018038\|Ga0187855_10658931	Not Available	610	Open in IMG/M
3300018043\|Ga0187887_10903434	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300019888\|Ga0193751_1241973	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300020021\|Ga0193726_1036888	All Organisms → cellular organisms → Bacteria → Acidobacteria	2392	Open in IMG/M
3300020579\|Ga0210407_10019617	All Organisms → cellular organisms → Bacteria → Acidobacteria	5021	Open in IMG/M
3300020580\|Ga0210403_10175754	All Organisms → cellular organisms → Bacteria → Acidobacteria	1755	Open in IMG/M
3300020582\|Ga0210395_11053765	Not Available	601	Open in IMG/M
3300021168\|Ga0210406_10509594	Not Available	950	Open in IMG/M
3300021171\|Ga0210405_11150925	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300021180\|Ga0210396_11155170	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300021181\|Ga0210388_10957740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300021401\|Ga0210393_11117568	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300021403\|Ga0210397_10675115	Not Available	793	Open in IMG/M
3300021404\|Ga0210389_10286534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1290	Open in IMG/M
3300021407\|Ga0210383_10082272	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2697	Open in IMG/M
3300021407\|Ga0210383_11309804	Not Available	605	Open in IMG/M
3300021420\|Ga0210394_10002497	All Organisms → cellular organisms → Bacteria	25067	Open in IMG/M
3300021420\|Ga0210394_10378184	Not Available	1245	Open in IMG/M
3300021432\|Ga0210384_10881218	Not Available	795	Open in IMG/M
3300021432\|Ga0210384_11667790	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300021433\|Ga0210391_11579990	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300021474\|Ga0210390_10540305	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300021474\|Ga0210390_10899807	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300021478\|Ga0210402_10941434	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300021479\|Ga0210410_10234433	Not Available	1645	Open in IMG/M
3300021479\|Ga0210410_10728470	All Organisms → cellular organisms → Bacteria → Acidobacteria	874	Open in IMG/M
3300021479\|Ga0210410_11303896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300022507\|Ga0222729_1009590	Not Available	992	Open in IMG/M
3300022531\|Ga0242660_1173643	Not Available	578	Open in IMG/M
3300022722\|Ga0242657_1029214	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300022731\|Ga0224563_1026270	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300025404\|Ga0208936_1017937	Not Available	902	Open in IMG/M
3300025509\|Ga0208848_1066213	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300025854\|Ga0209176_10104277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300025898\|Ga0207692_10336380	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300025923\|Ga0207681_10300173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300025949\|Ga0207667_10627230	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300025972\|Ga0207668_10627845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300025986\|Ga0207658_11881694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300026035\|Ga0207703_11657598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300026041\|Ga0207639_10275169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300026217\|Ga0209871_1072093	Not Available	665	Open in IMG/M
3300026217\|Ga0209871_1118475	Not Available	518	Open in IMG/M
3300026294\|Ga0209839_10126274	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300026467\|Ga0257154_1059418	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300026469\|Ga0257169_1085908	Not Available	516	Open in IMG/M
3300026508\|Ga0257161_1090705	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300027334\|Ga0209529_1028379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300027432\|Ga0209421_1113635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300027545\|Ga0209008_1030828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1247	Open in IMG/M
3300027567\|Ga0209115_1000302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6695	Open in IMG/M
3300027889\|Ga0209380_10678649	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300027895\|Ga0209624_10271068	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300027910\|Ga0209583_10192260	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300028047\|Ga0209526_10525647	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300028380\|Ga0268265_11997894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300028800\|Ga0265338_10350640	Not Available	1061	Open in IMG/M
3300029923\|Ga0311347_10315661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300030014\|Ga0302175_10061871	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300030047\|Ga0302286_10486911	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300030049\|Ga0302191_10016243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3824	Open in IMG/M
3300030763\|Ga0265763_1050791	Not Available	522	Open in IMG/M
3300030885\|Ga0265743_101655	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300031232\|Ga0302323_102960367	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300031234\|Ga0302325_10949975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300031708\|Ga0310686_103964194	All Organisms → cellular organisms → Bacteria → Acidobacteria	7993	Open in IMG/M
3300031823\|Ga0307478_10515236	All Organisms → cellular organisms → Bacteria → Acidobacteria	997	Open in IMG/M
3300031938\|Ga0308175_102750368	Not Available	550	Open in IMG/M
3300032421\|Ga0310812_10410548	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300032515\|Ga0348332_10179270	All Organisms → cellular organisms → Bacteria → Acidobacteria	1422	Open in IMG/M
3300033412\|Ga0310810_11172319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300033475\|Ga0310811_10917848	Not Available	786	Open in IMG/M
3300033545\|Ga0316214_1014997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300033547\|Ga0316212_1012916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1186	Open in IMG/M
3300033888\|Ga0334792_134267	Not Available	645	Open in IMG/M
3300034644\|Ga0370548_101867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.48%
Host-Associated	Host-Associated	17.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.61%
Plants	Host-Associated → Plants	17.52%
Aquatic	Environmental → Aquatic	13.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.77%
Freshwater	Environmental → Aquatic → Freshwater	10.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.57%
Peat	Environmental → Terrestrial → Peat	5.11%
Roots	Host-Associated → Plants → Roots	2.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.46%
Sediment	Environmental → Aquatic → Sediment	1.46%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.15%
Loam	Environmental → Terrestrial → Soil → Loam	16.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.65%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.46%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.11%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.19%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.73%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.73%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.30%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.92%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.19%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.46%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.46%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.46%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.73%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.73%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.73%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.73%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030885	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1036511241	3300000955	Soil	KLREAVTSQTDARIIVLELSEVRAIGGGGLGMLAFLQRWAREHNIRFLLFHPSKAVESQLKHARSIAEFYIASLEEMRALLAYANSRYALAA*
JGI12631J13338_10206411	3300001131	Forest Soil	EAVTSLTDARIVVLELSEVSAIGGGGFGMLVFLQRWARENNIRFLLFNPSELVLSALKRARSIAEFYIPSFEEMMALLAYASSRYAIAA*
JGIcombinedJ26739_1002308734	3300002245	Forest Soil	AYKLLEAVTSLTDARIVVLELSEVSAIGGGGFGMLVFLQRWARENNIRFLLFNPSESVLSVLKRATSIAEFYIPSFEEMMALLAYAKNRYALAA*
Ga0070683_1003222841	3300005329	Corn Rhizosphere	RIVVLELSEVHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAV*
Ga0070690_1009097481	3300005330	Switchgrass Rhizosphere	VHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSQSVRDGLKRARSISKFYIATMDEMMALLAYSNSRYALAA*
Ga0068868_1013847672	3300005338	Miscanthus Rhizosphere	VHAIEGGGLGTLVFLRRWALEHNILLAFNPSKSVRDGLKRASDLEVYIATMDEMMALLAYANSRYALA
Ga0068868_1023785581	3300005338	Miscanthus Rhizosphere	HAIEGGGLGMLVFLRRWARDHNIRFLLFNPSKAVRNGLKRARSISEFYIPTMDEMVALLAYASSRHAQVA*
Ga0070709_112588791	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LELSEVHAIEGGGLGMLVFLRRWARDHNIRFLLFNPSKAVRNGLKRARSISEFYIPSMDEMVALLAYASSRHAQAA*
Ga0070686_1012450161	3300005544	Switchgrass Rhizosphere	MTLREKLGFDSYRQTLLSREVHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA*
Ga0070696_1011426292	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA*
Ga0070763_103700512	3300005610	Soil	EIGGDGLGMLVFLQRWAREHNIRFLLFHPSKSVQNKLQHARSIAEFYITSLEEMKALLAYANSRFAMAV*
Ga0070763_108800901	3300005610	Soil	YKLRETVTSQTDARIIVLELSEVRVIGGGGLGMLAFLQRWAREHNIRFLLFHPSKEVERQLKHAKPIAEFYVASLEEMRALLAYANSRYAQAA*
Ga0068859_1000698045	3300005617	Switchgrass Rhizosphere	VHAIEGGGLGTLVFLRRWALEHNILLAFNPSKSVRDGLKRASDLEFYIATMDEMMALLAYANSRYALAA*
Ga0068864_1014927751	3300005618	Switchgrass Rhizosphere	SREVHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA*
Ga0070766_100228201	3300005921	Soil	SEVRALGGGGFGMLVFLQRWALERNIRFLLFHPSKSVQSKLEHARSIAEFYIASVGEMRALLAYANSRHALAV*
Ga0066787_100823162	3300005950	Soil	MLVFLRRWAREHNIRFLLFDPSKSVQKKLNGARSTAEFYIPSFEEMMALMACANSRYALAA*
Ga0080026_100072185	3300005952	Permafrost Soil	RIVVLELSEVRAIGGGGLGMLAFLQSWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYIASLEEMRALLAYANSRYALAA*
Ga0066790_100205111	3300005995	Soil	KLREAVTSQTEARIVVLELSDVRAIGGGGLGMLAFLQGWASEHNIRFLLFHPSKSVQNKLKRARSIAEFYIASLEEMRALLAYANSRYALAA*
Ga0070717_107237441	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GGIGMLAFLQRWAREHNIRFLLFHPSKAVESQLKHARSIAEFYIASLEEMRALLAYANSRYALAA*
Ga0075023_1001602303	3300006041	Watersheds	VVLELSEVHAIEGGGLGMLVFLQQWAREHNIRFMLFDPSKCVRDGLKRVRAISEFYIPTLDDMMALLTYADSQYAAA*
Ga0070716_1003306913	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GGGLGMLAFLQRWARERNIRFLLFHPSKSVQNKLKRARSIAEFYIASVEEMRALLAYANSRYPLVA*
Ga0070765_1008212883	3300006176	Soil	VVLELSEVSEIGGDGLGMLVFLQRWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYITSLEEMKALLAYANSRFALAV*
Ga0068871_1008678191	3300006358	Miscanthus Rhizosphere	LGMLVFLRRWARDHNIRFLLFNPSKAVRNGLKRARSISEFYIPTMDEMVALLAYASSRHAQVA*
Ga0075527_100549403	3300006640	Arctic Peat Soil	GGGGLGMLVFLQRWARENNIRFLLFNPSESVQSALKRARSIAEFYIPSFEEMMALLAYANSRYALAA*
Ga0075521_105097401	3300006642	Arctic Peat Soil	LSEVRAMGGVGLGMLVFLRRWAREHDIRFLLFNPSKCVQSELERARSTAEFYIPSLEEMMALLAYANSRYALAA*
Ga0073928_104347431	3300006893	Iron-Sulfur Acid Spring	EGVTSQTDARIVVLELSEVSAIGGDGLGMLVFLQRWAREHNIRFLLFHPSKSVQNTLKRARSIAGFYITSPEEMKALLAYANSRFALAA*
Ga0073928_106001051	3300006893	Iron-Sulfur Acid Spring	DARIVVLELSEVRAIGGGGLDMLVFLQGWAREHNIRFLLFHPSTAVQNKLKRARSIAQFYITSLEEMRALLAYANSRYAQAA*
Ga0097620_1000697982	3300006931	Switchgrass Rhizosphere	VHAIEGGGLGTLVFLRRWALEHNILLAFNPSKSVRDGLKRASDLEVYIATMDEMMALLAYANSRYALAA*
Ga0099829_105699093	3300009038	Vadose Zone Soil	LQRWARDHNIRFMLFDPSKCVRDGLKRIRAISEFYIPTLDDMTALLTYADSRYAAA*
Ga0105240_111033662	3300009093	Corn Rhizosphere	LGMLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA*
Ga0105245_100393601	3300009098	Miscanthus Rhizosphere	AIEGGGLGMLVFLRRWARDHNIRFLLFNPSKAVRNGLKRARSISEFYIPTMDEMVALLAYASSRHAQVA*
Ga0105245_124870682	3300009098	Miscanthus Rhizosphere	GMLIFLRRWARDHNIRFLLLNPSKSVRYGLKRIKAISEFYIPSTEEMAALVVYASSRQALAA*
Ga0105248_127199691	3300009177	Switchgrass Rhizosphere	MLIFLQRWARDHNIRFLLFNPSKSVRNGLKRARSISEFYIPTMEEMMALLAYANSRYAIAA*
Ga0116138_11440921	3300009552	Peatland	VRAIGGGGLGMLVFLQRWAREHNIRFLLFHPSTAVQNKLKRARSIAEFHIASSDEIRAILAYANSRYSLAA*
Ga0116130_12239751	3300009762	Peatland	VTSQSDARIIVVELSEVRAIGGGGLGMLAFLQRWAREHNIRFLLFHPSKAVESQLKHAGSIAEFYIASLEEMRALLAYANSRYALAA*
Ga0134128_101624744	3300010373	Terrestrial Soil	GGLGMLVFLRRWARDHNIRFLLFNPSKAVRNGLKRARSISEFYIPTMDEMVALLAYASSRHAQFA*
Ga0150983_109518483	3300011120	Forest Soil	IVVLELSEVSEIGGDGLGMLVFLQRWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYITSLEEMKALLAYANSRFALAV*
Ga0120134_10683671	3300012004	Permafrost	VHAIEGGGLSMLVYLKRWTREHNIRFLLFNPSKAVRNGLKRARSMSEFYIATIDEMAALMVYANSRYALTG*
Ga0137381_116433441	3300012207	Vadose Zone Soil	QTDAQIIVLELSEVRAIGGGGLGMLAFLQRWAREHNIRFLLFHPSKAVESRLKHARSIAEFYIASLEEMRALLAYANSRYALAA*
Ga0150984_1167635602	3300012469	Avena Fatua Rhizosphere	VVLELSEVNAIEGGGLGMLVSLQRWARDHNIRFLLFNPSKSVRNGLKRADSISEFYIPSMEQMMALLAYASSRYAIAA*
Ga0164298_105074672	3300012955	Soil	QTDARIVVLELSEVHAIEGGGLGMLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA*
Ga0164303_100889982	3300012957	Soil	VHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAV*
Ga0164304_101431412	3300012986	Soil	HAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA*
Ga0157374_100920324	3300013296	Miscanthus Rhizosphere	EVHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAV*
Ga0157378_100266027	3300013297	Miscanthus Rhizosphere	EGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA*
Ga0157378_111503281	3300013297	Miscanthus Rhizosphere	MLVFLRRWARDHNIRFLLFNPSKAVRNGLKRARSISEFYIPTMDEMVALLAYASSRHAQVA*
Ga0120149_11603461	3300014058	Permafrost	VLELSEVHAIEGGGLGMLVYLKRWARDHNIRFLLFNPSKAVRNGLKRARSISEFYIPTIDEMTALMVYANSRYALTG*
Ga0181532_105495811	3300014164	Bog	GGGGLGMLVFLQRWARENDIRFLLFNPSESVQSALKRARSIAEFYIPSFEEMMALLAYANSRYALAA*
Ga0181531_104567782	3300014169	Bog	SEVRAIGGGGLGMLVFLRRWAREHNTRFLLFHPSKAVQSKLEQARSITEFYISSSEEMKALLAYANSRYSPAA*
Ga0182018_100684531	3300014489	Palsa	LYRETAAYKLREAVTSQTDAEIVVLELSEVRAIGGGGLGMLVFLQRWAREHKVRFLLFHPSMSVLSRLKRARSIAKFYIASSEEIRAILAYANSRYSLAA*
Ga0182024_106552431	3300014501	Permafrost	RIVVLELSEVRAIGGGGLGMLVFLQRWAREHSIRFLLFHPSMSVRNRLERARSIAEFYISSSEEMRALVAYANSRYSLAA*
Ga0181505_106342341	3300016750	Peatland	GGGGLGMLVFLQRWARENDIRFLLFNPSESVQSALKRARSIAEFYIPSFEEMMALLAYANSRYALAA
Ga0187847_100970411	3300017948	Peatland	IVVLELSKVSAVGEGGVGMLVFLQRWARKKNIRFLLFNPSESVQSALRCARSIAEFYIPSFEEMMALLAYANSRYAQAA
Ga0187865_11816752	3300018004	Peatland	GLGMLVFLQRWALEHNIRFLLFHPSMSVQNKLRRARSIAEFYISSSEEMRALLAYANRRYSLAA
Ga0187804_103991151	3300018006	Freshwater Sediment	GGGLGMLVSLQRWAGEHNIRFLLFHPSKSVQNKLKRARSIAQFYITSLEEMRALLAYANSRYARAA
Ga0187884_102738282	3300018009	Peatland	QTDARIVVLELSEVRAIGGGGLGMLVFLQRWAREHNIRFLLFHPSMSVQNKLRRARSIAEFYISSSEEMRALLAYANRRYSLAA
Ga0187885_105275091	3300018025	Peatland	GLGMLVFLRRWAREHDIRFLLFNPSKSVRTRLKRARSTVEFYIPSLEEMRALLVYATSRYALAA
Ga0187863_100540194	3300018034	Peatland	GESVTSQTDARIVVLELSEVRAIGGGGLGMLVFLQRWAREHNIRFLLFHPSKSVQSRLKRARSIAEFYIPSLEEMRALLAYANRRYALAA
Ga0187855_104490521	3300018038	Peatland	VRAIGGGGLGMLVFLQRWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYISSSEEMRALLAYANSGYALAA
Ga0187855_106589312	3300018038	Peatland	DARIVVLELSEVSAIGGGGFGMLVFLQRWARENNIRFLLFNPSASVQSALKRARSIAEFYIPSFEEMMALVSYANSRYALAA
Ga0187887_109034341	3300018043	Peatland	AIGGGGLGMLVFLQRWAREHKIRFLLFHPSMSVLNRLKRVRSIAGFYIASSEEISAVLAYANRRYALAA
Ga0193751_12419732	3300019888	Soil	GMLVFLRRWARDHNIRFLLFNPSKSVRNGLKRIRSISEFYIPSMDEMTALLIYASSRHALAA
Ga0193726_10368881	3300020021	Soil	LSEVHAIEGGGLGMLVFLQRWARNRNIRFLLFNPSESVRNGLKRARSISEFYFPTIDEMMALLAYASSRYALAA
Ga0210407_100196171	3300020579	Soil	TDARIVVLELSEVHAIEGGGLGMLVFLRRWARDHDIRFLLFNPSKSVRSGLKRIRPISEFYIPTMDEMMALLAYASSRHALAA
Ga0210403_101757545	3300020580	Soil	GGFGMLVFLQRWAREHNIRFLLFHPSKSVQSKLENARSIAEFYIASLEEMKAILAYANSRYGLAA
Ga0210395_110537651	3300020582	Soil	VLEISEVRVIGGGGLGMLAFLQRWSRQQNIRFLLFHPSKEVERQLKDAKSIAEFHIASLEEMRALLAYANNRHALAA
Ga0210406_105095943	3300021168	Soil	IGGGGLGMLVFLQRWAQEHNIRFVLFHPSKAVEGQLKHARSIAEFYISSSAEMRALLAYANNRCALAA
Ga0210405_111509251	3300021171	Soil	LELSEVRAIGGGGLGMLAFLQRWAQEHNIRFLLFHPSRAVESRLKHARSIAEFYIASLEEMKALLAYASGRYALAA
Ga0210396_111551701	3300021180	Soil	REAVISQTDARIVVLELSEVRALGGGGFGMLVFLQRWAREHNIRFLLFHPSKSVRSKLENARSIAEFYIASSEEIRAILAYANSRCSLAA
Ga0210388_109577401	3300021181	Soil	SEVRALGGGGFGMLVFLQRWALERNIRFLLFHPSKSVQSKLEHARSIAEFYIASVGEMRALLAYANSRHALAV
Ga0210393_111175681	3300021401	Soil	SAIGGGGFGMLVFLQRWARENNIRFLLFNPTESVSSALRRARSIGEFYIPSFEEIRALLAYANSRNAIAA
Ga0210397_106751152	3300021403	Soil	KLRDAVTSQTEARIIVLEISEVRVIGGGGLGMLAFLQRWSRQQNIRFLLFHPSKEVERQLKDAKSIAEFHIASLEEMRALLAYANNRHALAA
Ga0210389_102865341	3300021404	Soil	SADKLREGVTSQTSARIVVLELSEVSAIGGDGLGMLVFLQRWARENNIRFLLFHPSKSVQNKLKRARSIAEFYITSLEEMKALLAYANSRFALAV
Ga0210383_100822721	3300021407	Soil	GGGSFGMLVFLQRWAREHNIRFLLFHPSKSVQSKLENARSIAQFYIASLEEMNAILAYANSRYGVAA
Ga0210383_113098041	3300021407	Soil	TAQTDARIVVLELSEVRAIGGGGLGMLVFLQGWAREHNIRFLLFHPSTAVQSKLKRVRSVAEFYITSLEEMKALLAYANSRCALAA
Ga0210394_1000249715	3300021420	Soil	MREAVTSQTDVRIVVLELSEVRAIGGGGLGMLVFLQRWAREHKVRFLLFHPSMSVLTRLKHARSIAEFYIASSEEIRAILAYANSRYSLALLTAS
Ga0210394_103781841	3300021420	Soil	TAQTDARIVVLELSEVRAIGGGGLGMLVFLQGWAREHNIRFLLFHPSTAVQSKLKRVRSVAEFYITSLEEMKALLAYANSRYALTA
Ga0210384_108812181	3300021432	Soil	AVTAQTDARIVVLELSEVRAIGGGGLGMLVFLQGWAREHNIRFLLFHPSTAVQSKLKRVRSVAEFYITSLEEMKALLAYANSRHAVAA
Ga0210384_116677901	3300021432	Soil	VVLELSEVRAIEGGGLGMLVFLQQWAREHNIRFMLFDPSKCVRDGLKRVRAISEFYIPTLDDMMALLTYAGSQYAAA
Ga0210391_115799901	3300021433	Soil	GLGMLAFLQRWAREHNIRFLLFHPSKEVERQLKHAKPIAEFYVASLEEMRALLAYANSRYAQAA
Ga0210390_105403051	3300021474	Soil	ARIVVLELSEVRAIGGGGLDMLVFLQGWAREHNIRFLLFHPSTAVQNKLKRARSIAQFYITSLDEMRALLAYANSRYAQAA
Ga0210390_108998072	3300021474	Soil	ELSEVSEIGGDGLGMLVFLQRWAREHNIRFLLFHPSKSVQNKLQHARSIAEFYITSLEEMKALLAYANSRFAMAV
Ga0210402_109414342	3300021478	Soil	TDARIVVLELSEVRALGGGGFGMLVFLQQWAQEHGIRFLLFHPSESVQSKLENARSIAEFYIASSGEMRALLAYANSRYGLAS
Ga0210410_102344333	3300021479	Soil	LVFLQRWAREHNIRFLLFHPSKPVQSKLENARSIAQFYIASLEEMGALLAYANSRYALAV
Ga0210410_107284703	3300021479	Soil	NARIVVLELSEVSAIGGDGLGMLVFLQRWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYITSLEEMKALLAYANSRFALAV
Ga0210410_113038961	3300021479	Soil	AIEGGGLGMLVFLRRWARDHNIRFLLFNPSKAVRNGLKRARSISEFYIPTMDEMMALLAYASSRHALAA
Ga0222729_10095901	3300022507	Soil	RALVGGGFGMLAFLQRWAREHNIRFLLFHPSKPVQSKLENARSIAQFYIASLEEMGALLAYANSRYALAV
Ga0242660_11736431	3300022531	Soil	VTAQTDARIVVLELSEVRAIGGGGLGMLVFLQGWAREHNIRFLLFHPSTAVQSKLKRVRSVAEFYITSLDEMKALLAYANSRHAVAA
Ga0242657_10292142	3300022722	Soil	VLELSEVRALGGGGFGMLVFLQRWAREHNIRFLLFHPSKPVQSKLENARSIAQFYIASLEEMGALLAYANSRYALAV
Ga0224563_10262702	3300022731	Soil	SAYKLREAVISQTDARIVVLELSEVRALGGGGFGMLVFLQRWAREHNIRFLLFHPSKSVRSKLENARSIAEFYIASSEEIRAILAYANSRCSLAA
Ga0208936_10179371	3300025404	Peatland	MLVFLRRWAREHNIRFLLFDPSKSVQKKLNGARSTAEFYIPSFEEMMALLACANSRYALA
Ga0208848_10662132	3300025509	Arctic Peat Soil	VVLELSEVRAIGGGGVGMLVFLQRWAREHNIRFLLFHPSKSVLSKLKRARSLAEFYISSSAEMSALLAYANSRYALAA
Ga0209176_101042771	3300025854	Arctic Peat Soil	GGLGMLVFLQRWARENNIRFLLFNPSESVQSALKRARSIAEFYIPSFEEMMALLAYANSRYALAA
Ga0207692_103363802	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ARIIVVELSEVRTIAGGGLGMLAFLQRWAREHNIRFLLFHPSKTVESQLKHARSIAEFYISSLEEMRALLAYANSRYALAA
Ga0207681_103001732	3300025923	Switchgrass Rhizosphere	VHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA
Ga0207667_106272301	3300025949	Corn Rhizosphere	REVHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAV
Ga0207668_106278451	3300025972	Switchgrass Rhizosphere	QTLLSREVHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA
Ga0207658_118816941	3300025986	Switchgrass Rhizosphere	GLGMLVFLRRWARDHNIRFLLFNPSKAVRNGLKRARSISEFYIPTMDEMVALLAYASSRHAQVA
Ga0207703_116575981	3300026035	Switchgrass Rhizosphere	REVHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA
Ga0207639_102751691	3300026041	Corn Rhizosphere	LLSREVHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA
Ga0209871_10720931	3300026217	Permafrost Soil	EAVTSQTDARIVVLELSEVRAIGGGGLGMLAFLQRWARKHNIRFLLFHPSKSVQNKLKRARSIAEFYIASLEEMKALLAYANNRYPLAS
Ga0209871_11184751	3300026217	Permafrost Soil	IVVLELSEVRAIGGGGLGMLAFLQSWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYIASLEEMRALLAYANSRYALAA
Ga0209839_101262742	3300026294	Soil	GLGMLVFLQRWARDHNIRFLLFNPSKSVRDRLKRARSIAEFYIPTLDEMRALLAYAKSRYALVA
Ga0257154_10594181	3300026467	Soil	ELSEVSAIGGDGLGMLVFLQRWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYIASLEEMRALLVYANSRYALAA
Ga0257169_10859082	3300026469	Soil	REAVTSLTDARIVVLELSEVSALGGGGFGMLVFLQRWARENNIRFLLFNPSESVHSALKRARSIAEFYIPSFEEMMALLAYANSRYALAA
Ga0257161_10907051	3300026508	Soil	YKLRKVVTSLTDARIVVLELLEVSAIGGGGLGMLVFLQRWARENNIRFLLFNPSESILRAIKRARSIAEFYIPSSEEMMALLAYAKSRYAIAA
Ga0209529_10283791	3300027334	Forest Soil	AIGGGGFGMLVFLQRWARENNIRFLLFNPSELVLSALKRARSIAEFYIPSFEEMMALLAYASSRYAIAA
Ga0209421_11136351	3300027432	Forest Soil	GLGMLVFLRRWARDHNIRFLLFNPSKSVRNGLKRARSISEFYIPTMDEMMALLAYASSRHALAA
Ga0209008_10308281	3300027545	Forest Soil	FLQRWAREHNIRFLLFHPSKSVQNKLRRARSIAEFYIPSLEEMKALLAYANSRFALAA
Ga0209115_10003021	3300027567	Forest Soil	TSQTNARIVVLELSEVSEIGGDGLGMLVFLQRWARQHNIRFLLFHPSKSVQNKLRHARSIAEFYIPSLEEMKALLAYANSRFALAV
Ga0209380_106786491	3300027889	Soil	AVTSQTEARIVVVELSEVRAIGGGGLGMLVFLRRWAREHNIRFLLFHPSKAVQSKLEHARSMTEFYISSSEEMKALLAYANSRYSPAA
Ga0209624_102710683	3300027895	Forest Soil	TSQTNARIVVLELSEVSEIGGDGLGMLVFLQRWAREHNIRFLLFHPSKSVQNTLKRARSIAEFYITSLEEMKALLAYANSRFAMAV
Ga0209006_108631981	3300027908	Forest Soil	FLQRWARQHNIRFLLFHPSKSVQNKLRHARSIAEFYIPSLEEMKALLAYANSRFALAV
Ga0209583_101922601	3300027910	Watersheds	RIVVLELSEVHAIEGGGLGMLVFLQQWAREHNIRFMLFDPSKCVRDGLKRVRAISEFYIPTLDDMMALLTYADSQYAAA
Ga0209526_105256471	3300028047	Forest Soil	VFLQRWARENNIRFLLFNPSESVQRALKRARSIAEFYIPSFEEMMALLACANSRYALAA
Ga0268265_119978941	3300028380	Switchgrass Rhizosphere	GGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA
Ga0265338_103506401	3300028800	Rhizosphere	IVATPASPIKIVELREAVTSQTDARIVVLELSEVRAIGRGALGMLVFLQRWARDHNIRFLLFHPSKAVEVELKHARSIADFYSSSSAEMRALLAYANSRYALAA
Ga0311347_103156613	3300029923	Fen	VGLGMLVFLRRWAREHDIRFLLFNPSKCVQSELERARSTAEFYIPSLEEMMALLAYANSRYALAA
Ga0302175_100618711	3300030014	Fen	VFLQRWAREHNIRFLLFNPSKSVLNRLKRAGSFAEFYIPSLEEIRAVLAYANSRYALAA
Ga0302286_104869111	3300030047	Fen	VVLELSEVHAIGGGGLGMLVFLQRWAREHNIRFMLFNPSKSVQSGLERTRSIAEFYIPSLEEMMALLAYANSRYALAA
Ga0302191_100162431	3300030049	Bog	SGVSAIGGFGFGVLVFLRQWAREHNIRFLVSDPSNPVQSRLSRARSTAEFYVPSFEEMMARVAFASSRYALAA
Ga0265763_10507911	3300030763	Soil	LAFLQRWAREHSIRFLLFHPSTSVQNELKRARSISKFYIASLEEMKALLAYANSRYALAA
Ga0265743_1016552	3300030885	Soil	RIVVLELSEVRAIGGGGLDMLVFLQGWAREHNIRFLLFHPSTAVQNKLKRASSIAQFYITSLEEMRALLAYANSRYAQAA
Ga0302323_1029603672	3300031232	Fen	ELSEVHAIGGGGLGMLVFLQRWAREHNIRFLLFHPSKSVQSRLKSARSIAEFYISSSAEMRALLAYANSRYALAS
Ga0302325_109499752	3300031234	Palsa	VEAIEGGGLGMLVFLQRWARNHNIRFLLFNPSKAVRSRLKRAKSIAKIYVATLEEMMALVVYAHGRYARVA
Ga0310686_10396419416	3300031708	Soil	VTSQTDARIVVLELSEVSEIGGDGLGMLVFLQRWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYITSLEEMKALLAYANSRFALAV
Ga0307474_103333491	3300031718	Hardwood Forest Soil	FLQRWAREHNIRFLLFHPSKSVQNKLKRARSIAEFYITSLEEMKALLAYANSRFALAV
Ga0307478_105152361	3300031823	Hardwood Forest Soil	KLREAVISQTDARIVVLELSEVRAIGGGGLGMLVFLQRWAREHKVRFLLFHPSMSVRSRLKRARSIAEFYISSSDEIMALLAYANSRYSLAA
Ga0308175_1027503682	3300031938	Soil	LELSEVRAIGGGGLGMLESLQRWSREQNIRFLLFHPSKAVECRLQHARSIADFYIASPEEMRALLAYANSRYAFAA
Ga0310812_104105481	3300032421	Soil	VHAIEGGGLSTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLAYANSRYALAA
Ga0348332_101792704	3300032515	Plant Litter	REAVTSQTEARIVVVELSEVRAIGGGGLGMLVFLRRWAREHNIRFLLFHPSKAVQSKLEHARSITEFYISSSEEMKALLAYANSRYSPAA
Ga0310810_111723191	3300033412	Soil	VHAIEGGGLGTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIDTMDEMMALLAYANGRYALAA
Ga0310811_109178482	3300033475	Soil	LRAPWMSLREKLGLDSYRQTLLSREVHAIEGGGLSTLVFLRRWALEHNIRFLLFNPSKSVRDGLKRARSISKFYIATMDEMMALLEYANSRYALAA
Ga0316214_10149971	3300033545	Roots	EVRALGGGGFGMLVFLQRWAREHNIRFLLFHPSKSVRSKLENARSIAEFYIASSEEIRAILAYANSRCSLAA
Ga0316212_10129161	3300033547	Roots	TSLADARIVVLELSEVSALGEGGLGMLVFLQRWARDNHIRFLLFNPSESVQGALERARSIARFYIPSFEEMMALLAYANSRYAVAA
Ga0334792_134267_364_639	3300033888	Soil	LREAVTSQTEARIVVVELSEVRAIGGGGLGMLAFLQGWAREHNIRFLLFHPSKSVQNKLKRTRSIAAFYIASLEEMRALLAYANSRYALAA
Ga0370548_101867_2_223	3300034644	Soil	SEVHAIEGGGLGMLVFLRRWARDHNIRFLLFNPSKAVRNALKRARSISEFYIPTMDEMVALLAYASSRHALAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056842

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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