Metagenome Family F056841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056841
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	63 residues
Representative Sequence	METEITFLGGRVETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Number of Associated Samples	111
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.26 %
% of genes near scaffold ends (potentially truncated)	35.77 %
% of genes from short scaffolds (< 2000 bps)	82.48 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.482 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.438 % of family members)
Environment Ontology (ENVO)	Unclassified (31.387 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.146 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.26% β-sheet: 45.65% Coil/Unstructured: 51.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
e.60.1.1: Thermophilic metalloprotease (M29)	d2ayia1	2ayi	0.62457
e.60.1.1: Thermophilic metalloprotease (M29)	d1zjca1	1zjc	0.62102
b.38.1.2: Pleiotropic translational regulator Hfq	d2ylba_	2ylb	0.61715
c.3.1.5: FAD/NAD-linked reductases, N-terminal and central domains	d3dk9a2	3dk9	0.59334
e.52.1.0: automated matches	d4wera1	4wer	0.58952

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF02627	CMD	29.20
PF09278	MerR-DNA-bind	16.79
PF13411	MerR_1	10.22
PF00456	Transketolase_N	8.76
PF08327	AHSA1	8.76
PF02780	Transketolase_C	2.92
PF02779	Transket_pyr	2.19
PF09754	PAC2	1.46
PF12730	ABC2_membrane_4	0.73
PF01381	HTH_3	0.73
PF00196	GerE	0.73
PF13302	Acetyltransf_3	0.73
PF00224	PK	0.73
PF16701	Ad_Cy_reg	0.73
PF12840	HTH_20	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	29.20
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	29.20
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	16.79
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	8.76
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	8.76
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.48 %
Unclassified	root	N/A	17.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.48 %
Unclassified	root	N/A	17.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.48 %
Unclassified	root	N/A	17.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.91 %
Unclassified	root	N/A	17.52 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	5.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.45 %
Unclassified	root	N/A	17.52 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	5.11 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.73 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.88 %
Unclassified	root	N/A	17.52 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	5.11 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	37.23 %
Unclassified	root	N/A	17.52 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	5.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.73 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.23 %
Unclassified	root	N/A	17.52 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	5.11 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.23 %
Unclassified	root	N/A	17.52 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	5.11 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.23 %
Unclassified	root	N/A	17.52 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	5.11 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.23 %
Unclassified	root	N/A	17.52 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	5.11 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_12154741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300001686\|C688J18823_10002808	All Organisms → cellular organisms → Bacteria	10949	Open in IMG/M
3300002243\|C687J29039_10265234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300002568\|C688J35102_119855870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300003319\|soilL2_10048617	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300004020\|Ga0055440_10001465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3351	Open in IMG/M
3300004081\|Ga0063454_100163507	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300004114\|Ga0062593_100094566	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300004114\|Ga0062593_100144364	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300004114\|Ga0062593_102610634	Not Available	574	Open in IMG/M
3300004156\|Ga0062589_100362207	All Organisms → cellular organisms → Bacteria → Proteobacteria	1157	Open in IMG/M
3300004157\|Ga0062590_100126724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1690	Open in IMG/M
3300004463\|Ga0063356_100256178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2126	Open in IMG/M
3300004463\|Ga0063356_100648787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1439	Open in IMG/M
3300004463\|Ga0063356_104503385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300004479\|Ga0062595_100859999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300004479\|Ga0062595_102674129	Not Available	502	Open in IMG/M
3300004643\|Ga0062591_100609851	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300004779\|Ga0062380_10356887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300005184\|Ga0066671_10093160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1653	Open in IMG/M
3300005204\|Ga0068997_10080996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300005329\|Ga0070683_101591124	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005332\|Ga0066388_106277876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300005332\|Ga0066388_107567689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300005334\|Ga0068869_100172723	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300005336\|Ga0070680_101143141	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300005341\|Ga0070691_10014337	All Organisms → cellular organisms → Bacteria	3634	Open in IMG/M
3300005341\|Ga0070691_10292788	Not Available	887	Open in IMG/M
3300005347\|Ga0070668_100710497	Not Available	887	Open in IMG/M
3300005438\|Ga0070701_11047198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300005526\|Ga0073909_10680445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300005564\|Ga0070664_101440676	All Organisms → cellular organisms → Bacteria → Spirochaetes	651	Open in IMG/M
3300005578\|Ga0068854_101614936	Not Available	591	Open in IMG/M
3300005587\|Ga0066654_10251298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	932	Open in IMG/M
3300005615\|Ga0070702_100133661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1571	Open in IMG/M
3300005713\|Ga0066905_100349647	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1181	Open in IMG/M
3300005764\|Ga0066903_101863093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1151	Open in IMG/M
3300005764\|Ga0066903_103251162	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300005836\|Ga0074470_10651446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15688	Open in IMG/M
3300006046\|Ga0066652_100841716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	877	Open in IMG/M
3300006173\|Ga0070716_100346470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300006173\|Ga0070716_101683028	Not Available	523	Open in IMG/M
3300006794\|Ga0066658_10009605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3533	Open in IMG/M
3300006904\|Ga0075424_102509375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300009036\|Ga0105244_10546736	Not Available	533	Open in IMG/M
3300009098\|Ga0105245_10014057	All Organisms → cellular organisms → Bacteria	6973	Open in IMG/M
3300009148\|Ga0105243_10590737	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300009148\|Ga0105243_11806734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300009176\|Ga0105242_10028358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4456	Open in IMG/M
3300009176\|Ga0105242_11266624	Not Available	759	Open in IMG/M
3300010359\|Ga0126376_11387223	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300010391\|Ga0136847_12236643	All Organisms → cellular organisms → Bacteria	7338	Open in IMG/M
3300010400\|Ga0134122_10303670	Not Available	1371	Open in IMG/M
3300012212\|Ga0150985_100180650	All Organisms → cellular organisms → Bacteria	2613	Open in IMG/M
3300012469\|Ga0150984_112568790	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300012487\|Ga0157321_1021204	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012884\|Ga0157300_1061593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300012904\|Ga0157282_10159279	All Organisms → cellular organisms → Bacteria → Spirochaetes	695	Open in IMG/M
3300012908\|Ga0157286_10119607	Not Available	801	Open in IMG/M
3300012913\|Ga0157298_10081328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	832	Open in IMG/M
3300012951\|Ga0164300_10029390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2001	Open in IMG/M
3300012951\|Ga0164300_10765928	All Organisms → cellular organisms → Bacteria → Spirochaetes	594	Open in IMG/M
3300012955\|Ga0164298_10887410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300012957\|Ga0164303_10300012	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300012958\|Ga0164299_10411314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300012960\|Ga0164301_10159091	Not Available	1392	Open in IMG/M
3300012960\|Ga0164301_11381595	Not Available	575	Open in IMG/M
3300012960\|Ga0164301_11523554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300012985\|Ga0164308_10232644	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300012987\|Ga0164307_10981164	Not Available	686	Open in IMG/M
3300013296\|Ga0157374_10897344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300013308\|Ga0157375_12387270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300015258\|Ga0180093_1040860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1023	Open in IMG/M
3300015371\|Ga0132258_10474841	All Organisms → cellular organisms → Bacteria	3122	Open in IMG/M
3300015373\|Ga0132257_100481713	All Organisms → cellular organisms → Bacteria → Proteobacteria	1519	Open in IMG/M
3300018433\|Ga0066667_12093754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300018466\|Ga0190268_12156405	Not Available	519	Open in IMG/M
3300018476\|Ga0190274_11346896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300019356\|Ga0173481_10018757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2076	Open in IMG/M
3300019356\|Ga0173481_10149828	Not Available	961	Open in IMG/M
3300019356\|Ga0173481_10449056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300021082\|Ga0210380_10069113	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300021445\|Ga0182009_10183267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300022756\|Ga0222622_11240789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300022756\|Ga0222622_11474328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300023071\|Ga0247752_1077835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300024055\|Ga0247794_10029192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1420	Open in IMG/M
3300025313\|Ga0209431_10236306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1440	Open in IMG/M
3300025538\|Ga0210132_1001382	All Organisms → cellular organisms → Bacteria	2969	Open in IMG/M
3300025885\|Ga0207653_10381190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300025907\|Ga0207645_10018968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4517	Open in IMG/M
3300025907\|Ga0207645_10979883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300025908\|Ga0207643_10100839	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300025921\|Ga0207652_11769999	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300025924\|Ga0207694_10333462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1253	Open in IMG/M
3300025924\|Ga0207694_11599033	Not Available	549	Open in IMG/M
3300025927\|Ga0207687_10017166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4759	Open in IMG/M
3300025933\|Ga0207706_10951884	All Organisms → cellular organisms → Bacteria → Spirochaetes	723	Open in IMG/M
3300025934\|Ga0207686_10070212	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300025934\|Ga0207686_10641823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300025940\|Ga0207691_10757920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300025942\|Ga0207689_10963207	Not Available	720	Open in IMG/M
3300025945\|Ga0207679_11535581	All Organisms → cellular organisms → Bacteria → Spirochaetes	610	Open in IMG/M
3300025972\|Ga0207668_11329784	Not Available	647	Open in IMG/M
3300026035\|Ga0207703_10104246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2409	Open in IMG/M
3300026035\|Ga0207703_10125381	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300026067\|Ga0207678_10527607	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300026078\|Ga0207702_12120170	Not Available	552	Open in IMG/M
3300026089\|Ga0207648_11886267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300026118\|Ga0207675_100610493	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300026118\|Ga0207675_100897235	All Organisms → cellular organisms → Bacteria → Spirochaetes	903	Open in IMG/M
3300026325\|Ga0209152_10005003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4853	Open in IMG/M
3300027695\|Ga0209966_1157087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300028589\|Ga0247818_10981452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300028790\|Ga0307283_10257609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300028802\|Ga0307503_10035473	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300028802\|Ga0307503_10035727	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300028809\|Ga0247824_10886136	Not Available	557	Open in IMG/M
3300028880\|Ga0307300_10134693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	768	Open in IMG/M
3300030336\|Ga0247826_11071373	Not Available	643	Open in IMG/M
3300031170\|Ga0307498_10228437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300031200\|Ga0307496_10062913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300031366\|Ga0307506_10012167	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1936	Open in IMG/M
3300031366\|Ga0307506_10168345	All Organisms → cellular organisms → Bacteria → Spirochaetes	782	Open in IMG/M
3300031366\|Ga0307506_10204466	Not Available	727	Open in IMG/M
3300031720\|Ga0307469_11383826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300031834\|Ga0315290_10077275	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300031854\|Ga0310904_10087071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1679	Open in IMG/M
3300031908\|Ga0310900_10681958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300031938\|Ga0308175_100785895	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300031939\|Ga0308174_11669168	Not Available	547	Open in IMG/M
3300031949\|Ga0214473_10219679	All Organisms → cellular organisms → Bacteria	2193	Open in IMG/M
3300031949\|Ga0214473_11527976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300031995\|Ga0307409_101323027	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300032013\|Ga0310906_10026729	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300033233\|Ga0334722_11069298	Not Available	567	Open in IMG/M
3300034147\|Ga0364925_0096585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1045	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.61%
Host-Associated	Host-Associated	31.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.85%
Plants	Host-Associated → Plants	31.39%
Aquatic	Environmental → Aquatic	8.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.14%
Freshwater	Environmental → Aquatic → Freshwater	3.65%
Sediment	Environmental → Aquatic → Sediment	2.92%
Marine	Environmental → Aquatic → Marine	2.19%
Floodplain	Environmental → Terrestrial → Floodplain	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.53%
Loam	Environmental → Terrestrial → Soil → Loam	14.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.92%
Lake	Environmental → Aquatic → Freshwater → Lake	2.19%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.19%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.30%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.19%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.19%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.19%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.46%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.73%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.19%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.19%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.73%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.73%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.73%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_121547411	3300000891	Soil	METKITFLGGRVETFDPSSEIKFTPHGVEVLSRDADDVVRVLFPWGQIERVTQ
C688J18823_100028085	3300001686	Soil	METEIAFVGGRVETFPQTADIKLTQFGVEVMERDGDDAVRVLFPWGQIEKLTQRGSAVAAVYTW*
C687J29039_102652342	3300002243	Soil	METEITFLGGRVETFDQSVTIKMTQYGVEALSTQGEEAVRVLFPWAQIEKITQHGANVAAIYTY*
C688J35102_1198558701	3300002568	Soil	METEITFLGGRVEMFPQTAEIKLTQFGIEVMERDGDDAVRVLFPWGQIEKLTQRGSAVAAVYTW*
soilL2_100486173	3300003319	Sugarcane Root And Bulk Soil	METEISFVNGSVETFSQDMDIKMTPYGVEVVSRDGDEGVRVLFPWAQIEKVTQRGANVSAVYTY*
Ga0055440_100014654	3300004020	Natural And Restored Wetlands	METEITFLGGRVESFRPPMEIKMTSFGVEVLSHQGEDSVKVLFPWGQIEKVTQRGVHVSAVYTS*
Ga0063454_1001635072	3300004081	Soil	METEIMFVGGRVETFPQTAEIKLTQFGVEVLERDGDDAVRVLFPWGQIEKVTQRGAAVAAVYTW*
Ga0062593_1000945663	3300004114	Soil	METKITFVGGRIETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY*
Ga0062593_1001443643	3300004114	Soil	VETEITFVGGKVETFDHSVDIKLTQHGLEALSRDGDDAVRVLFPWGQIERVTQRGAAVAAVYTW*
Ga0062593_1026106342	3300004114	Soil	METEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW*
Ga0062589_1003622072	3300004156	Soil	METEITFLGGRVETFPQTADIKLTQFGLEVMERDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW*
Ga0062590_1001267241	3300004157	Soil	METKITFVGGRIETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAA
Ga0063356_1002561783	3300004463	Arabidopsis Thaliana Rhizosphere	VETEITFVGGRAEIFDPSIDIKLTQFGIEVLSRDGDDAVRVLFPWAQIEKVTQRGAAVAAVYTW*
Ga0063356_1006487873	3300004463	Arabidopsis Thaliana Rhizosphere	METEITFLGGRVQAFPPTAEIKLTQFGIEVLERDGDDAVRVLFPWGQIEKLAQRGAAVAAVYTW*
Ga0063356_1045033851	3300004463	Arabidopsis Thaliana Rhizosphere	METKITFLGGRVETFDPSSEIKFTPHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY*
Ga0062595_1008599992	3300004479	Soil	METEITFLGGRVETFPQTAEIKLTQFGIEVMQRDGDDAVRVLFPWNQIEKLTQRGSAVAAVYTW*
Ga0062595_1026741291	3300004479	Soil	METEITFLGGRMETFAQTAEIKLTQFGVEVLQRDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW*
Ga0062591_1006098512	3300004643	Soil	METEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAIYTW*
Ga0062380_103568872	3300004779	Wetland Sediment	MDTEITFVGGRVESFPPTMEIKMTAFGIEVLSVEGEDSVRVLFPWAQIEKVTQRGATVSAIYKY*
Ga0066671_100931601	3300005184	Soil	METEITFLGGRVETFGATAEIKMTQFGIEVMQRDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW*
Ga0068997_100809962	3300005204	Natural And Restored Wetlands	METEITFIGGRVESFSPSMEIKMTPYGVEVLSREGEDSVRVLFPWAQIEKVTQRGATVAAIYTY*
Ga0070683_1015911242	3300005329	Corn Rhizosphere	METEITFLGGRAETFDPSSEIKLTQHGVEVMSRDGDDVVRVLFPWGQIERVTQRGAAVSAVYTY*
Ga0066388_1062778761	3300005332	Tropical Forest Soil	METEITFLGGRVETFPQTADIKLTQFGIEVMERDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW*
Ga0066388_1075676891	3300005332	Tropical Forest Soil	METEIMFLGGRVQTFPQSAEIKLTQFGIEVLERDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW*
Ga0068869_1001727233	3300005334	Miscanthus Rhizosphere	METEITFLGGRMETFPPTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW*
Ga0070680_1011431412	3300005336	Corn Rhizosphere	METEITFLGGRMETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW*
Ga0070691_100143374	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	METEITFLGGRIETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW*
Ga0070691_102927881	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	EITFVGGKVETFDHSVDIKLTQFGLEALSRDGDDAVRVLFPWGQIEKVTQRGAAVAAVYTW*
Ga0070668_1007104972	3300005347	Switchgrass Rhizosphere	METEITFLGGRIETFPLTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW*
Ga0070701_110471981	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VETEITFVGGKVETFDHSVDIKLTQFGLEALSRDGDDAVRVLFPWGQIEKVTQRGAAVAAVYTW*
Ga0073909_106804452	3300005526	Surface Soil	METQITFLGGRVETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY*
Ga0070664_1014406761	3300005564	Corn Rhizosphere	ETKITFVGGRIETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY*
Ga0068854_1016149361	3300005578	Corn Rhizosphere	YWGFGPLRSGRGGTVETEITFVGGKVETFDHSVDIKLTQFGLEALSRDGDDAVRVLFPWGQIEKVTQRGAAVAAVYTW*
Ga0066654_102512982	3300005587	Soil	METEITFLGGRMETFAQTAEIKLTQFGVEVMQRDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW*
Ga0070702_1001336614	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VETEITFVGGRAETFDPSIDIKLTQFGIEVLSRDGDDAVRVLFPWAQIEKVTQRGAAVAAVYTW*
Ga0066905_1003496473	3300005713	Tropical Forest Soil	METEITFLGGRVETFPQTADIKLTQFGIEVMERDGDEAVRVLFPWGQIEKVTQRGSAVAAVYTW*
Ga0066903_1018630933	3300005764	Tropical Forest Soil	METELTFLGGRVETFPQTAEIKLTQFGVEVMQRDGDDAVRVLFPWNQIEKVTQRGSAVAAVYTW*
Ga0066903_1032511621	3300005764	Tropical Forest Soil	ITFLGGRAETFPQTAEIKLTQFGIEVLQRDGDDAVRVLFPWNQIEKVTQRGSAVAAVYTW
Ga0074470_106514467	3300005836	Sediment (Intertidal)	METEITFLGGRVETFEASTEIKLTQYGVQVEVREADDLMRVLFPWAQIERITQRGPAISAAYTY*
Ga0066652_1008417162	3300006046	Soil	METEITFLGGRVEMFGATAEIKMTQFGIEVMQRDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW*
Ga0070716_1003464703	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	METEITFLGGRVETFPQTAEIKMTQFGLEVLQRDGDDAVRVLFPWSQIEKVTQRGSAVAAVYTW*
Ga0070716_1016830282	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GRVETFPQTAEIKLTQFGIEVMQRDGDDAVRVLFPWNQIEKLTQRGSAVAAVYTW*
Ga0066658_100096053	3300006794	Soil	LPAGGSIETEITFLGGRVDTFGATAEIKMTQFGIEVMQRDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW*
Ga0075424_1025093752	3300006904	Populus Rhizosphere	METEITFLGGRVETFPQTAEIKLTQFGIEVMQRDGDDAVRVLFPWNQIEKLT
Ga0105244_105467362	3300009036	Miscanthus Rhizosphere	ITFLGGRVETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0105245_1001405712	3300009098	Miscanthus Rhizosphere	EITFLGGRMETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGSAVAAVYTW*
Ga0105243_105907373	3300009148	Miscanthus Rhizosphere	VGGSMETEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW*
Ga0105243_118067341	3300009148	Miscanthus Rhizosphere	METEITFLGGRAETFDPSSEIKLTQHGVEVMSRDGDDVVRVLFPWGQIERVTQRGAAVSAVYT
Ga0105242_100283588	3300009176	Miscanthus Rhizosphere	METEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGA
Ga0105242_112666242	3300009176	Miscanthus Rhizosphere	METEITFLGGRVETFPQTAEIKLTQFGVEVMQRDGDDAVRVLFPWNQIEKLTQRGSAVAAVYTW*
Ga0126376_113872232	3300010359	Tropical Forest Soil	METEITFLGGRAETFPQTAEIKLTQFGVEVLQRDGDDAVRVLFPWNQIEKLTQRGSAVAAVYTW*
Ga0136847_122366437	3300010391	Freshwater Sediment	METEITFLGGRVERFEASTDIKLTQYGLQVEVRDADDLTRVLFPWGQIERITQRGPAVSAVYTY*
Ga0134122_103036702	3300010400	Terrestrial Soil	METEIAFLGGRIETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW*
Ga0150985_1001806501	3300012212	Avena Fatua Rhizosphere	DGRSPAGGSMETEIMFVGGRVETFPQTAEIKLTQFGVEVLERDGDDAVRVLFPWGQIEKVTQRGAAVAAVYTW*
Ga0150984_1125687903	3300012469	Avena Fatua Rhizosphere	DGRSPAGGSMETEIMFVGGRVETFPQTAEIRLTQFGVEVLERDGDDAVRVLFPWGQIEKVTQRGAAVAAVYTW*
Ga0157321_10212042	3300012487	Arabidopsis Rhizosphere	EITFLGGRIETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGSAVAAVYTW*
Ga0157300_10615932	3300012884	Soil	METKITFVGGRIETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSA
Ga0157282_101592791	3300012904	Soil	METKITFVGGRIETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAIYTY*
Ga0157286_101196073	3300012908	Soil	GRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW*
Ga0157298_100813283	3300012913	Soil	METKITFVGGRIETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVT
Ga0164300_100293902	3300012951	Soil	METEITFLGGRVETVPQTAEIKMTQFGLEVLQRDGDVAVRVLFPWGQIEKVSQRGSAVAAVYTW*
Ga0164300_107659282	3300012951	Soil	METEITFLGGRVETFDPATEIKMTPYGVEVLSRDAEDVVRVLFPWAQIERVTQRGAAISAVYTY*
Ga0164298_108874101	3300012955	Soil	METEITFLGGRVQAFPQTAEIKLTQFGIEVLERDGDDAVRVLFPWGQIEKLAQRGAAV
Ga0164303_103000122	3300012957	Soil	METEITFLGGRVETFHQTAEIKLTQFGLEVMQRDGDDAVRVLFPWGQIEKVSQRGSAVAAVYTW*
Ga0164299_104113143	3300012958	Soil	METEITFLGGRVETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQH
Ga0164301_101590913	3300012960	Soil	METEITFLGGRVETFPQTAEIKMTQFGLEVLQRDGDDAVRVLFPWGQIEKVSQRGSAVAAVYTW*
Ga0164301_113815952	3300012960	Soil	SMETEITCLGGRVHAFPQTAESKLTQFGIEVLERDGDDAVRVLFPWGQIEKLAQRGAAVAAVYTW*
Ga0164301_115235542	3300012960	Soil	METEITFLGGRVETFPQTAEIKLTQFGLEVMQRDGDDACRVVFPLNQIEKVTQRGSAVAAVYTW*
Ga0164308_102326441	3300012985	Soil	METEITFLGGRVETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKLTQRGSAVAAVYTW*
Ga0164307_109811642	3300012987	Soil	SMETEITFLGGRVQAFPQTAEIKLTQFGIEVLERDGDDAVRVLFPWGQIEKLAQRGAAVAAVYTW*
Ga0157374_108973441	3300013296	Miscanthus Rhizosphere	METEITFLGGRVETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQ
Ga0157375_123872702	3300013308	Miscanthus Rhizosphere	METEITFLGGRAETFDPSSEIKLTQHGVEVLSRDGDDVVRVLFPWGQIERVTQRGAAVSAVYTY*
Ga0180093_10408603	3300015258	Soil	METEITFVGGRVETFDESSGIRLTDHGVEVVSRSEEGGSIRVLFPWAQIERMTQRGADVSSIYTY*
Ga0132258_104748413	3300015371	Arabidopsis Rhizosphere	METEITFLGGRVETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGSAVAAVYTW*
Ga0132257_1004817132	3300015373	Arabidopsis Rhizosphere	METEITFLGGRVETFPQTAEIKLTQFGIEVMQRDGDDAVGVLFPWNQIEKLTQRGSAVAAVYTW*
Ga0066667_120937541	3300018433	Grasslands Soil	METEITFLGGRMETFAQTAEIKLTQFGVEVMQRDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW
Ga0190268_121564051	3300018466	Soil	METEITFVGGRAETFDPSVDIKLTQFGIEVLSRDADEAVRVLFPWAQIEKVTQRGAAVAAVYTW
Ga0190274_113468962	3300018476	Soil	METQITFLGGRVETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0173481_100187573	3300019356	Soil	METKITFVGGRIETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0173481_101498282	3300019356	Soil	GRGGTVETEITFVGGKVETFDHSVDIKLTQHGLEALSRDGDDAVRVLFPWGQIERVTQRGAAVAAVYTW
Ga0173481_104490562	3300019356	Soil	METEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0210380_100691134	3300021082	Groundwater Sediment	METEITFVGGRVETFDPTSEIKLTQHGLEVVSRDADDIVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0182009_101832673	3300021445	Soil	METEITFVGGRIEEFPQTAEIKLTQFGVEVMQRDGEDAVRVLFPWGQIEKVTQRGSAVAAVYTW
Ga0222622_112407892	3300022756	Groundwater Sediment	METKITFVGGRVETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0222622_114743282	3300022756	Groundwater Sediment	METEITFVGGRIENFDQSAEIKMTPFGVEIILRTEEEPVRVLFPWAQIEKITQRGATVS
Ga0247752_10778352	3300023071	Soil	TESSQSGGPMETKITFVGGRIETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0247794_100291922	3300024055	Soil	METEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYIW
Ga0209431_102363063	3300025313	Soil	METEITFLGGRVETFDQSVTIKMTQYGVEALSTQGEEAVRVLFPWAQIEKITQHGANVAAIYTY
Ga0210132_10013824	3300025538	Natural And Restored Wetlands	METEITFLGGRVESFRPPMEIKMTSFGVEVLSHQGEDSVKVLFPWGQIEKVTQRGVHVSAVYTS
Ga0207653_103811902	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	METEITFLGGRVETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207645_100189688	3300025907	Miscanthus Rhizosphere	METEITFLGGRIETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207645_109798832	3300025907	Miscanthus Rhizosphere	VETEITFVGGKVETFDHSVDIKLTQFGLEALSRDGDDAVRVLFPWGQIEKVTQRGAAVAAVYTW
Ga0207643_101008394	3300025908	Miscanthus Rhizosphere	METEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGVAVAAVYTW
Ga0207652_117699991	3300025921	Corn Rhizosphere	GGSMETEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207694_103334623	3300025924	Corn Rhizosphere	METEITFLGGRMETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVY
Ga0207694_115990332	3300025924	Corn Rhizosphere	GGMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207687_100171662	3300025927	Miscanthus Rhizosphere	METEITFLGGRVETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGSAVAAVYTW
Ga0207706_109518842	3300025933	Corn Rhizosphere	METEITFLGGRAETFDPSSEIKLTQHGVEVMSRDGDDVVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0207686_100702124	3300025934	Miscanthus Rhizosphere	LGTFGRGRTGWPGAYWSFGPLRSGRGGTVETEITFVGGKVETFDHSVDIKLTQFGLEALSRDGDDAVRVLFPWGQIEKVTQRGAAVAAVYTW
Ga0207686_106418233	3300025934	Miscanthus Rhizosphere	VETEITFVGGKVETFDHSVDIKLTQFGLEALSRDGDDAVRVLFPWGQIEKVTQ
Ga0207691_107579202	3300025940	Miscanthus Rhizosphere	METEITFLGGRMETFPPTADIKLTQFGLEVKQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207689_109632071	3300025942	Miscanthus Rhizosphere	ETFPPTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGSAVAAVYTW
Ga0207679_115355811	3300025945	Corn Rhizosphere	SGGPMETKITFVGGRIETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0207668_113297841	3300025972	Switchgrass Rhizosphere	METEITFLGGRIETFPLTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207703_101042465	3300026035	Switchgrass Rhizosphere	METEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAV
Ga0207703_101253811	3300026035	Switchgrass Rhizosphere	METFAPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207678_105276073	3300026067	Corn Rhizosphere	GGRMETFPQTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207702_121201701	3300026078	Corn Rhizosphere	GCSSPVGGSMETEITFLGGRMETFPPTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207648_118862671	3300026089	Miscanthus Rhizosphere	METEITFPGGRVETFPQTAEIKLTQFGIEVMQRDGDDAVRVLFPWNQIEKLTQRGSAVAAVYTW
Ga0207675_1006104931	3300026118	Switchgrass Rhizosphere	TEITFLGGRMETFPPTAEIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0207675_1008972352	3300026118	Switchgrass Rhizosphere	METQITFLGGRVETFDPSSEIKLTQHGVEVMSRDGDDVVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0209152_100050039	3300026325	Soil	METEITFLGGRVETFGATAEIKMTQFGIEVMQRDGDDAVRVLFPWGQIEKVTQRGSAVAAVYTW
Ga0209966_11570872	3300027695	Arabidopsis Thaliana Rhizosphere	VETEITFVGGKVETFDHSVDIKLTQHGLEALSRDGDDAVRVLFPWGQIERVTQRGAAVAAVYTW
Ga0247818_109814522	3300028589	Soil	METEITFLGGRTETFPPSMDIKFTQFGVEVLSRDGEEAVRVLFPWAQIEKITQRGASVSAVYTY
Ga0307283_102576091	3300028790	Soil	METEITFLGGRMETFPQTAEIKLNQYGVEVMQRDGDDAVRVLFPWNQIEKVTQRGLAVAA
Ga0307503_100354734	3300028802	Soil	METEITFLGGRVETFDPSSEIKLTQHGVEVVSRDADDIVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0307503_100357272	3300028802	Soil	METEITFVGGRVETFDVSCEIKLTPHGLEVLSRDAEDVVRVLFPWGQIERVTQRGPAISAVYTY
Ga0247824_108861361	3300028809	Soil	MRAGCSSPVGGSMETEITFLGGRIETFPLTADIKLTQFGLEVMQRDGDDAVRVLFPWNQIEKVTQRGAAVAAVYTW
Ga0307300_101346933	3300028880	Soil	RVETFDPSSEIKFTQHGVEVLSRDADDVVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0247826_110713731	3300030336	Soil	METEITFLGGRVQTFPQTAEIKLTQFGIEVLERDGDDAVRVLFPWGQIEKLAQRGAAVAAVYTW
Ga0307498_102284372	3300031170	Soil	METEITFLGGRVETFDPASEIKMTPYGVEVLSRDAEDVVRVLFPWAQIERVTQRGAAISAVYTY
Ga0307496_100629131	3300031200	Soil	METEITFLGGRVETFDPSSEIKLTQHGVEVVSRDADDIVRVLFPWGQIERVTQRGAAISAVYTY
Ga0307506_100121673	3300031366	Soil	METEITFVSGRVETFDESSGIKLTDHGVEVVSRSDEGSIRVLFPWAQIERMTQRGADVSSIYTY
Ga0307506_101683452	3300031366	Soil	METQITFLGGRVETFDPASEIKFTPHGVEVMSRDADDIVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0307506_102044662	3300031366	Soil	METEITFLGGRVQTFPQTADIKLTQFGLEVLERDGDEAVRVLFPWGQIEKVSQRGAAVAAVYTW
Ga0307469_113838262	3300031720	Hardwood Forest Soil	METEITFLGGRVQSFPQTAEIKLTQFGIEVLERDGDDAVRVLFPWGQIEKLAQRGAAVAAVYTW
Ga0315290_100772751	3300031834	Sediment	METEITFVSGRVETFDESSGIRLTDHGVEVVSRSDEGGSIRVLFPWAQIERMTQRGADVSSIYTY
Ga0310904_100870713	3300031854	Soil	METEITFLGGRAETFDPSSEIKLTQHGVEVLSRDGDDVVRVLFPWGQIERVTQRGAAVSAVYTY
Ga0310900_106819581	3300031908	Soil	METEITFLGGRAETFDPSSEIKLTQHGVEVMSRDGDDVVRVLFPWGQIERVTQ
Ga0308175_1007858953	3300031938	Soil	METEITFLGGRMETFPQTAEIKLTQHGVEVLQRDGDDAVRVLFPWGQIEKLTQRGSAVAAVYTW
Ga0308174_116691681	3300031939	Soil	LGGRMETFPQTAEIKLTQHGVEVLQRDGDDAVRVLFPWGQIEKLTQRGSAVAAVYTW
Ga0214473_102196793	3300031949	Soil	MDTEITFVGGRAETFPPSMDIKMTPYGVEVLSHEGEDSVRVLFPWPQIEKITQRGATVSAIYTY
Ga0214473_115279761	3300031949	Soil	METEITFLGGRVETFDQSVTIKMTQYGVEALSTQGEEAVRVLFPWAQIEKIT
Ga0307409_1013230272	3300031995	Rhizosphere	VETEITFVGGKAETFDASIEVKLTQFGVEVLSRDGDDAVRVLFPWGQIEKITQRGAAIAAVYTW
Ga0310906_100267292	3300032013	Soil	METEITFLGGRAETFDPSSEIKLTQHGVEVLSRDGDDVVRVLFPWGQIERITQRGAAVSAVYTY
Ga0334722_110692981	3300033233	Sediment	GALRHWGGPMETEITFVGGRVETFDASTDIKLTQYGLQVEVRDADDLTRVLFPWGQIERITQRGPAVSAAYTY
Ga0364925_0096585_632_829	3300034147	Sediment	METEITFVGGRVETFDESSGIRLTDHGVEVVSRSEEGGSIRVLFPWAQIERMTQRGADVSSIYTY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056841

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences