Metagenome / Metatranscriptome Family F056819

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056819
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	83 residues
Representative Sequence	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR
Number of Associated Samples	102
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.85 %
% of genes near scaffold ends (potentially truncated)	33.58 %
% of genes from short scaffolds (< 2000 bps)	85.40 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.533 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.248 % of family members)
Environment Ontology (ENVO)	Unclassified (24.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.095 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.36% β-sheet: 0.00% Coil/Unstructured: 43.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF12244	DUF3606	4.38
PF02082	Rrf2	2.92
PF04588	HIG_1_N	2.92
PF03466	LysR_substrate	2.92
PF09955	DUF2189	1.46
PF01527	HTH_Tnp_1	0.73
PF08734	GYD	0.73
PF07690	MFS_1	0.73
PF02643	DUF192	0.73
PF01972	SDH_sah	0.73
PF07883	Cupin_2	0.73
PF09339	HTH_IclR	0.73
PF02518	HATPase_c	0.73
PF13560	HTH_31	0.73
PF11159	DUF2939	0.73
PF00044	Gp_dh_N	0.73
PF00005	ABC_tran	0.73
PF00589	Phage_integrase	0.73
PF13975	gag-asp_proteas	0.73
PF01694	Rhomboid	0.73
PF13586	DDE_Tnp_1_2	0.73
PF01243	Putative_PNPOx	0.73
PF04392	ABC_sub_bind	0.73
PF00582	Usp	0.73
PF03401	TctC	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	2.92
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	2.92
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	2.92
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	2.92
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	2.92
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	2.92
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	2.92
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	2.92
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.46
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.73
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	0.73
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.73
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.73
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
All Organisms	root	All Organisms	28.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
cellular organisms	root	All Organisms → cellular organisms	28.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.44 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.52 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.95 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.46 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.30 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.46 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	0.73 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.73 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.38 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.46 %
Rhodoligotrophos	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos	0.73 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.73 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.73 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.46 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.73 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.73 %
Rhodoligotrophos appendicifer	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos appendicifer	0.73 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.73 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.53 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.46 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.73 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.73 %
Rhodoligotrophos appendicifer	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos appendicifer	0.73 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.73 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10068348	Not Available	902	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1020824	Not Available	1234	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10014105	Not Available	1927	Open in IMG/M
3300004152\|Ga0062386_100046405	Not Available	3263	Open in IMG/M
3300004633\|Ga0066395_10166521	Not Available	1129	Open in IMG/M
3300004633\|Ga0066395_10192900	Not Available	1062	Open in IMG/M
3300005542\|Ga0070732_10568882	Not Available	688	Open in IMG/M
3300005554\|Ga0066661_10295612	Not Available	998	Open in IMG/M
3300005556\|Ga0066707_10705929	Not Available	632	Open in IMG/M
3300005574\|Ga0066694_10449623	Not Available	603	Open in IMG/M
3300005764\|Ga0066903_102749761	Not Available	955	Open in IMG/M
3300006041\|Ga0075023_100543362	Not Available	531	Open in IMG/M
3300006047\|Ga0075024_100339834	Not Available	747	Open in IMG/M
3300006049\|Ga0075417_10114425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1233	Open in IMG/M
3300006052\|Ga0075029_100838973	Not Available	627	Open in IMG/M
3300006057\|Ga0075026_100479690	Not Available	713	Open in IMG/M
3300006059\|Ga0075017_100908027	Not Available	684	Open in IMG/M
3300006086\|Ga0075019_10199798	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1183	Open in IMG/M
3300006086\|Ga0075019_10794017	Not Available	603	Open in IMG/M
3300006174\|Ga0075014_100093255	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1390	Open in IMG/M
3300006174\|Ga0075014_100125030	Not Available	1229	Open in IMG/M
3300006175\|Ga0070712_101077918	Not Available	697	Open in IMG/M
3300006800\|Ga0066660_11050719	Not Available	650	Open in IMG/M
3300006804\|Ga0079221_10508448	Not Available	784	Open in IMG/M
3300006854\|Ga0075425_100006717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12093	Open in IMG/M
3300006854\|Ga0075425_102692182	Not Available	548	Open in IMG/M
3300006871\|Ga0075434_101006242	Not Available	847	Open in IMG/M
3300006871\|Ga0075434_101639310	Not Available	651	Open in IMG/M
3300006880\|Ga0075429_100380106	Not Available	1236	Open in IMG/M
3300006893\|Ga0073928_10002389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32473	Open in IMG/M
3300006893\|Ga0073928_10056107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3511	Open in IMG/M
3300006903\|Ga0075426_10844741	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300006914\|Ga0075436_100251890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1258	Open in IMG/M
3300006914\|Ga0075436_100673818	Not Available	765	Open in IMG/M
3300006969\|Ga0075419_10525894	Not Available	824	Open in IMG/M
3300007076\|Ga0075435_101174098	Not Available	671	Open in IMG/M
3300007076\|Ga0075435_101684054	Not Available	556	Open in IMG/M
3300009094\|Ga0111539_11710816	Not Available	729	Open in IMG/M
3300009156\|Ga0111538_14157044	Not Available	500	Open in IMG/M
3300010358\|Ga0126370_10104554	Not Available	1967	Open in IMG/M
3300010358\|Ga0126370_10429493	Not Available	1095	Open in IMG/M
3300010359\|Ga0126376_11775018	Not Available	654	Open in IMG/M
3300010360\|Ga0126372_10492817	Not Available	1148	Open in IMG/M
3300010360\|Ga0126372_10617744	Not Available	1043	Open in IMG/M
3300010360\|Ga0126372_11045026	Not Available	831	Open in IMG/M
3300010361\|Ga0126378_10920724	Not Available	980	Open in IMG/M
3300010366\|Ga0126379_10279839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1662	Open in IMG/M
3300010376\|Ga0126381_101797109	Not Available	885	Open in IMG/M
3300010376\|Ga0126381_102284705	Not Available	777	Open in IMG/M
3300010379\|Ga0136449_100556915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1969	Open in IMG/M
3300011000\|Ga0138513_100072258	Not Available	532	Open in IMG/M
3300012198\|Ga0137364_10623124	Not Available	813	Open in IMG/M
3300012198\|Ga0137364_10691577	Not Available	770	Open in IMG/M
3300012198\|Ga0137364_11331739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	534	Open in IMG/M
3300012201\|Ga0137365_10240486	Not Available	1348	Open in IMG/M
3300012201\|Ga0137365_10587373	Not Available	817	Open in IMG/M
3300012206\|Ga0137380_10410971	Not Available	1201	Open in IMG/M
3300012207\|Ga0137381_10115574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2287	Open in IMG/M
3300012208\|Ga0137376_11033559	Not Available	703	Open in IMG/M
3300012209\|Ga0137379_10134139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2379	Open in IMG/M
3300012210\|Ga0137378_10164482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2060	Open in IMG/M
3300012211\|Ga0137377_10305087	Not Available	1526	Open in IMG/M
3300012211\|Ga0137377_11833797	Not Available	525	Open in IMG/M
3300012285\|Ga0137370_10187603	Not Available	1209	Open in IMG/M
3300012349\|Ga0137387_10077273	Not Available	2282	Open in IMG/M
3300012353\|Ga0137367_11077434	Not Available	544	Open in IMG/M
3300012355\|Ga0137369_10175941	Not Available	1676	Open in IMG/M
3300012356\|Ga0137371_10439550	Not Available	1010	Open in IMG/M
3300012359\|Ga0137385_10575334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300012971\|Ga0126369_10503783	Not Available	1269	Open in IMG/M
3300016270\|Ga0182036_11466238	Not Available	572	Open in IMG/M
3300016341\|Ga0182035_10516749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300016371\|Ga0182034_11706179	Not Available	554	Open in IMG/M
3300016387\|Ga0182040_10937027	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300016445\|Ga0182038_11469038	Not Available	612	Open in IMG/M
3300017930\|Ga0187825_10082399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1105	Open in IMG/M
3300017936\|Ga0187821_10046140	Not Available	1557	Open in IMG/M
3300017961\|Ga0187778_10879500	Not Available	615	Open in IMG/M
3300017974\|Ga0187777_10032932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	3326	Open in IMG/M
3300017974\|Ga0187777_10261938	Not Available	1175	Open in IMG/M
3300018058\|Ga0187766_10026203	All Organisms → cellular organisms → Bacteria	3361	Open in IMG/M
3300018058\|Ga0187766_10035418	All Organisms → cellular organisms → Bacteria → Proteobacteria	2906	Open in IMG/M
3300018081\|Ga0184625_10065849	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300018086\|Ga0187769_10031195	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300018468\|Ga0066662_11142388	Not Available	782	Open in IMG/M
3300021170\|Ga0210400_10555717	Not Available	947	Open in IMG/M
3300021432\|Ga0210384_10148850	Not Available	2101	Open in IMG/M
3300021432\|Ga0210384_10926169	Not Available	772	Open in IMG/M
3300021560\|Ga0126371_10156566	All Organisms → cellular organisms → Bacteria → Proteobacteria	2344	Open in IMG/M
3300021560\|Ga0126371_10274453	Not Available	1807	Open in IMG/M
3300021560\|Ga0126371_10856904	Not Available	1053	Open in IMG/M
3300022557\|Ga0212123_10028973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5781	Open in IMG/M
3300022557\|Ga0212123_10137583	Not Available	1908	Open in IMG/M
3300024225\|Ga0224572_1013681	Not Available	1547	Open in IMG/M
3300025915\|Ga0207693_10246940	Not Available	1401	Open in IMG/M
3300027743\|Ga0209593_10120488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	955	Open in IMG/M
3300027812\|Ga0209656_10420302	Not Available	596	Open in IMG/M
3300027824\|Ga0209040_10277116	Not Available	828	Open in IMG/M
3300027873\|Ga0209814_10124183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1102	Open in IMG/M
3300027874\|Ga0209465_10065853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1751	Open in IMG/M
3300027910\|Ga0209583_10738922	Not Available	517	Open in IMG/M
3300027911\|Ga0209698_11160017	Not Available	570	Open in IMG/M
3300027915\|Ga0209069_10187364	Not Available	1048	Open in IMG/M
3300027915\|Ga0209069_10945326	Not Available	525	Open in IMG/M
3300028719\|Ga0307301_10133605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300029636\|Ga0222749_10845455	Not Available	500	Open in IMG/M
3300031474\|Ga0170818_105031918	Not Available	532	Open in IMG/M
3300031545\|Ga0318541_10832702	Not Available	515	Open in IMG/M
3300031573\|Ga0310915_10047865	All Organisms → cellular organisms → Bacteria	2749	Open in IMG/M
3300031573\|Ga0310915_10786481	Not Available	670	Open in IMG/M
3300031719\|Ga0306917_11272981	Not Available	570	Open in IMG/M
3300031724\|Ga0318500_10414850	Not Available	671	Open in IMG/M
3300031744\|Ga0306918_11558969	Not Available	504	Open in IMG/M
3300031833\|Ga0310917_10051144	All Organisms → cellular organisms → Bacteria	2539	Open in IMG/M
3300031879\|Ga0306919_11191004	Not Available	579	Open in IMG/M
3300031890\|Ga0306925_10179365	All Organisms → cellular organisms → Bacteria → Proteobacteria	2281	Open in IMG/M
3300031890\|Ga0306925_10594924	Not Available	1169	Open in IMG/M
3300031910\|Ga0306923_11062045	Not Available	875	Open in IMG/M
3300031912\|Ga0306921_10801894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300031912\|Ga0306921_12360608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	556	Open in IMG/M
3300031912\|Ga0306921_12652025	Not Available	516	Open in IMG/M
3300031941\|Ga0310912_10679448	Not Available	799	Open in IMG/M
3300031954\|Ga0306926_10367056	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300031954\|Ga0306926_10471589	Not Available	1545	Open in IMG/M
3300031954\|Ga0306926_11638689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos appendicifer	737	Open in IMG/M
3300031954\|Ga0306926_11989784	Not Available	654	Open in IMG/M
3300032065\|Ga0318513_10438504	Not Available	638	Open in IMG/M
3300032066\|Ga0318514_10528881	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300032076\|Ga0306924_10067852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3974	Open in IMG/M
3300032076\|Ga0306924_12147152	Not Available	571	Open in IMG/M
3300032160\|Ga0311301_10471735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1877	Open in IMG/M
3300032261\|Ga0306920_101702465	Not Available	893	Open in IMG/M
3300032261\|Ga0306920_102026479	Not Available	805	Open in IMG/M
3300032261\|Ga0306920_102237105	Not Available	759	Open in IMG/M
3300032261\|Ga0306920_103213995	Not Available	611	Open in IMG/M
3300033290\|Ga0318519_11083132	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.32%
Host-Associated	Host-Associated	11.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.80%
Aquatic	Environmental → Aquatic	17.52%
Plants	Host-Associated → Plants	11.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.68%
Sediment	Environmental → Aquatic → Sediment	10.22%
Freshwater	Environmental → Aquatic → Freshwater	4.38%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.92%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.38%
Loam	Environmental → Terrestrial → Soil → Loam	4.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.65%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.22%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.19%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.22%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	9.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.38%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.73%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100683481	3300000597	Forest Soil	VFAGGVLKMQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKR
AF_2010_repII_A100DRAFT_10208241	3300000655	Forest Soil	RAVFAGGVLKMQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTIRVRHG*
AF_2010_repII_A001DRAFT_100141053	3300000793	Forest Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTIRVRHG*
Ga0062386_1000464055	3300004152	Bog Forest Soil	VFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPFKRASSDFPTTIRMR*
Ga0066395_101665211	3300004633	Tropical Forest Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGSGETAIAKFFALFWGWADYTPKDWSSAPYKRA
Ga0066395_101929002	3300004633	Tropical Forest Soil	AVFLIARRGYWCYPQRVFDEARGSGETATAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTIRVRHG*
Ga0070732_105688821	3300005542	Surface Soil	MQTLLVDLILAAAVGAVFLIARRPKTPIAVVYWDYASRLSGKARGISMAKFFALFWGWADYNPKDWSSAPYKRERPRLREKITYRVG*
Ga0066661_102956123	3300005554	Soil	MQTLFVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0066707_107059291	3300005556	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGRSRETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0066694_104496231	3300005574	Soil	MQTLLVDLILAAAVGAVFLIARRPKTPIAVPYWDYAQRLSGKARGSSEETAMGKFFALFWGWADYDPKDWSSAPYKR
Ga0066903_1027497612	3300005764	Tropical Forest Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDESRGISGRNGNFAKFFALFWGWADYTPKDWSNAPYKRASSHSSTTIRMRH*
Ga0075023_1005433621	3300006041	Watersheds	VFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0075024_1003398341	3300006047	Watersheds	MQTLLVNLIFFAVVGAVFLIARRSKNWRYVPRLSGKTGGISGETALASFFALFWGWADYNPM
Ga0075417_101144252	3300006049	Populus Rhizosphere	MRCLKMQTLLVDLILAAAVAVVFLIARRSKNWGYVLRLSGKTGSTLANFFALFWGWADYNPKDWSSAPYKRGYGDERRRSTIVYR*
Ga0075029_1008389732	3300006052	Watersheds	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYKPKDWSNAPYKRASSDFPTTIRMR*
Ga0075026_1004796902	3300006057	Watersheds	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0075017_1009080271	3300006059	Watersheds	MQTLLVDLILAAAVGAVFLIARRPNTPIAVLYSDYASRLSGKAPGISMAKFSALFWGWADYKPKDWSSAPYKRERPRRSEKITYRTG*
Ga0075019_101997983	3300006086	Watersheds	MQTLLVNLIFFSVVGAVFLIARRSKNWGYVPRLSGKTGGISGETALASFFALFWGWADYNPKDWSSAPYKRGYAS*
Ga0075019_107940171	3300006086	Watersheds	VFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYKPKDWSNAPYKRASSDFPTTIRMR*
Ga0075014_1000932554	3300006174	Watersheds	MQTLLVNLIFFAVVGAVFLIARRSKNWGYVPRLSGKTGGISGETALASFFALFWGWADYNPKDWSSAPYKRGYGDERRRTTIVYR*
Ga0075014_1001250301	3300006174	Watersheds	GYAQRLSDKAHGISGETAIAKFFALFWGWADYKPKDWSNAPYKRASSDFPTTIRMR*
Ga0070712_1010779182	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YRAVFAGGVLKMQTLFVALILAAVVAAVFLIARRGYWGYAQRLSDKAHGLSGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFSTTIRMR*
Ga0066660_110507192	3300006800	Soil	MQTLFVALILAAVVGAVFLIARRGYWGYAQRLSDKAQGISGETAIAKFFALFWGWADYNPKDWSSAPYKRASS
Ga0079221_105084481	3300006804	Agricultural Soil	QEKARPLQTLLVNLIFFAVVGAVFLIARRSKNWGYVPRLSGKTGGISGETALASFFALFWGWADYNPQDWSSAPYKRGYGDERRHLQLYTARQAM*
Ga0075425_1000067172	3300006854	Populus Rhizosphere	MQTLLVDLILAAAVAVVFLIARRSKNWGYVLRLSGKTGSTLANFFALFWGWADYNPKDWSSAPYKRGYGDERRRSTIVYR*
Ga0075425_1026921821	3300006854	Populus Rhizosphere	MQTLLVDLILAAAVGVVFLIARRSKNWGYVPRLSGKTVGTLANFFALFWGWADYNPKDWSSAPFKRGYGD
Ga0075434_1010062422	3300006871	Populus Rhizosphere	MQTLLVDLILAAAVAVVFLIARRSKNWGYVLRLSGKTGSTLANFFALFWGWADYNPKDWSSAPYK
Ga0075434_1016393102	3300006871	Populus Rhizosphere	MRCLKMQTLLVDLILAAAVGVVFLIARRSKNWGYVPRLSGKTVGTLANFFALFWGWADYNPKDWSSAPFKRGYGDERRRSKIVYR*
Ga0075429_1003801062	3300006880	Populus Rhizosphere	MQTLLVDLILAAAVGVVFLIARQSKNWGYMPRLSQRGGISAGESALAKFFALFWGWADYNPKDWSSASYKRGYGDERRRSTIKYR*
Ga0073928_1000238934	3300006893	Iron-Sulfur Acid Spring	MQTLLVDLILAAAVAAVFLIALRPKTPIAVLYGDYTHRRSGKARGISGETAMAKFFALFWGWADYNPKDWSSAPYKRGYAS*
Ga0073928_100561072	3300006893	Iron-Sulfur Acid Spring	MQTLLVDLTLAAVAGAVFLIARRSKNWGYMPRLSGKTGGISVGETAIAKFFALFWGWADYTPKDWSNAPYKREHSAGRASSVSYRSA*
Ga0075426_108447411	3300006903	Populus Rhizosphere	MQTLLVDLILAAAVAVVFLIARRSKNWGYVLRLSGKTGSTLANFFALFWGWADYNPKDWSSAPFKRGYGDERRRSKIVYR*
Ga0075436_1002518902	3300006914	Populus Rhizosphere	MQTLLVDLILAAAAVGVGFLIARQSKNWGYMPRFSRKRDGISAGESALANFFALFWGWADYNPKDWSSASYKRGYGDERRRSTIKYR*
Ga0075436_1006738181	3300006914	Populus Rhizosphere	MRSRQEKARPLQTLLVNLIFFAVVGAVFLIARRSKNWGYVPRLSGKTGGISGETALASFFALFWGWADYNPKDWSSAPFKRGYGDERRRSTIVYR*
Ga0075419_105258942	3300006969	Populus Rhizosphere	NRPRVLKIQTLLVDLILAAAVGVVFLIARQSKNWGYMPRLSQRGGISAGESALAKFFALFWGWADYNPKDWSSASYKRGYGDERRRSTIKYR*
Ga0075435_1011740981	3300007076	Populus Rhizosphere	MQTLLVDLILAAAVAVVFLIARRSKNWGYVLRLSGKTGSTLANFFALFWGWADYNPKDWSSAPYKRGYGDERRHLQLYTARQAM*
Ga0075435_1016840541	3300007076	Populus Rhizosphere	MQTLLVDLILAAAVGVVFLIARRSKNWGYVPRLSGKTVGTLANFFALFWGWADYNPKDWSSAPFKRGYGDERR
Ga0111539_117108161	3300009094	Populus Rhizosphere	MQTLLVDLILAAAVAVVFLIARRSKNWGYVLRLSGKTGSTLANFFALFWGWADYNPKDWSSAPFKRGYGDERRRSTIVYR*
Ga0111538_141570441	3300009156	Populus Rhizosphere	MRCLKMQTLLVDLILAAAVGVVFLIARRSKNWGYVPRLSGKTVGTLANFFALFWGWADYNPKDWSSASYKRGYGDERRRSTIVYR*
Ga0126370_101045545	3300010358	Tropical Forest Soil	VFAGGVLKMQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETATAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTIRVRHG*
Ga0126370_104294932	3300010358	Tropical Forest Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFALFWGWADYTPKDWSSAPYKRAASDFPTTIRMRH*
Ga0126376_117750181	3300010359	Tropical Forest Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGSGETAIAKFFALFWGSADYTPKDWSSAPYKRAASDFPTTIRMRH*
Ga0126372_104928174	3300010360	Tropical Forest Soil	MLSILVALILTAVVGAVFLIARRGYWGYPQRVSDEARSISGETGLVFALFWGWADYTPKDWSNAVYKRGSSDFPKTIRIRH*
Ga0126372_106177441	3300010360	Tropical Forest Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETATAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTIRVRHG*
Ga0126372_110450262	3300010360	Tropical Forest Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGSGETAIAKFFALFWGWADYTPKDWSSAPYKRAASDFPTTIRMRH*
Ga0126378_109207242	3300010361	Tropical Forest Soil	MQTSLVALILATVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPY
Ga0126379_102798392	3300010366	Tropical Forest Soil	MQSLLVALILTAVVGAVFLIARRGYWGYPQRVSDEARSISGETGLAKFFALFWGWADYTPKDWSNAVYKRGSSDFPKTIRIRH*
Ga0126381_1017971091	3300010376	Tropical Forest Soil	MQTSLVALILATVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTIRVRHG*
Ga0126381_1022847051	3300010376	Tropical Forest Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFALFWGWADYTPKDWSSAPYKRAASDFPTTIRMRH*
Ga0136449_1005569155	3300010379	Peatlands Soil	MQTLLVDLILAAAVGAVFLIARRPNTPIAVLYSDYASRLSGKAPGISMAKFSALFWGWADYKSKDWSSAPYKRERPRRSEKITYRTG*
Ga0138513_1000722581	3300011000	Soil	MRCLKMQTVLLDLILAAAVGVVFLIARRSKNWGYVPRLSGKTVGTLANFFALFWGWADYNPKDWSSAPYKRGYGDERRRSTIVYR*
Ga0137364_106231242	3300012198	Vadose Zone Soil	VGAVFLIARRGYWGHAQRLSDKAHGISGETAIAKFFALFWGWADYSPKDWSSAPYKRASSDFPTTIRMR*
Ga0137364_106915771	3300012198	Vadose Zone Soil	ILAAVVGAVFLIARRGYWGYAQRLSDKAHGLSGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0137364_113317391	3300012198	Vadose Zone Soil	MQTLLVAVILAVVVGAVFLIARRGYWGYPQRLSDNSDKARGIFGQTAIAKFFALFWGWADYTPKDWSNAPYKRASLDSPKTIRMRHQ*
Ga0137365_102404861	3300012201	Vadose Zone Soil	MSLRERTLLRAGNNPAVFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWDWADYNPKDWSSAPYKRASSDFPTTIQMR*
Ga0137365_105873732	3300012201	Vadose Zone Soil	MQTLLVDLILAAAVGAVFLIARRPKTPIAVPYWDYAQRLSGKARGISGETAMAKFFALFWGWADYNPKDWSSAPYK*
Ga0137380_104109711	3300012206	Vadose Zone Soil	MSLRERTPLRAGNNPAVFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWDWADYNPKDWSS
Ga0137381_101155744	3300012207	Vadose Zone Soil	MSLRERTLLRAGNNPAVFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0137376_110335592	3300012208	Vadose Zone Soil	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGLSGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0137379_101341394	3300012209	Vadose Zone Soil	MSLRERTPLRAGNNPAVFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGHAQRLSDKAHGISGETAIAKFFALFWDWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0137378_101644821	3300012210	Vadose Zone Soil	MSLRERTPLRAGNNPAVFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWDWADYNPKDWSSAPYKRASSDFSTTIRMR*
Ga0137377_103050873	3300012211	Vadose Zone Soil	MQTLLVAVILAVVVGAVFLIARRGYWGYPQRLSDNSDKARGIFGQTAIAKFFALFWGWADYTPKDWSNAPYKRASSDSPKTIRMRQQ*
Ga0137377_118337971	3300012211	Vadose Zone Soil	VAVRTDLKPPAPEGRAATPWAGNNPAVFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWDWADYNPKDWSSAPYKRASSDFPTTIRMR
Ga0137370_101876031	3300012285	Vadose Zone Soil	AGNNPAVVAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGLSGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0137387_100772735	3300012349	Vadose Zone Soil	MSLRERTPLRAGNNPAVFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWDWADYNPEDWSSAPYKRASSDFPTTIRMR*
Ga0137367_110774341	3300012353	Vadose Zone Soil	MQTLLVDLILAAAVGAVFLIARRPKTPIAVLYWDYAQRPSGKARGISGETAMAKFFALFWGWADYNPKDWSSAPYKRGYAS*
Ga0137369_101759412	3300012355	Vadose Zone Soil	MQTLLVDLILAAAVGAVFLIARRPKTPIAVPYWDYAQRLSGKARGISGETAMAKFFALFWGWADYNPKDWSSAPYKRGYAS*
Ga0137371_104395501	3300012356	Vadose Zone Soil	MSLRERTPLRAGNNPAVFAGGVLKMQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWDWADYNPKDWSSAPYKRASSDFPTTIRMR*
Ga0137385_105753341	3300012359	Vadose Zone Soil	ILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFSTTIRMR*
Ga0126369_105037831	3300012971	Tropical Forest Soil	IGDYRAVFAGGVLKMQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTIRVRHG*
Ga0182036_114662382	3300016270	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYSQRLSDKAGGSGEREIAKFFALFWGWADYTPKDWSNAPYKRASKDFSKTIRVRH
Ga0182035_105167492	3300016341	Soil	MPTLLVDLILAAAVGAVFLIALRPKTPIAVLYRDYAQRLSGKGRGIPGETALAKFYRLFWGWADYNPKDWSNAPYKRGYADQPKR
Ga0182034_117061791	3300016371	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDKAGGSGERAIAKFFALFWGWADYTPKDWSSAPYKRAFSDSSTTIRMRH
Ga0182040_109370272	3300016387	Soil	MQSLLVALILAAVVGAVFLIARRGYWGYPQRLSDEARSISGETAIAKFFALFWGWADYTPKDWSSAPYKRASSGFSTTIRMRHG
Ga0182038_114690381	3300016445	Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTIRVRHG
Ga0187825_100823991	3300017930	Freshwater Sediment	MRTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISVETAIAKFFALFCGWADYNPKDWSSAPFKRASSDFPTTIRMR
Ga0187821_100461403	3300017936	Freshwater Sediment	MQTLLVALILAAVVGAIFLIARRGYWGYARRLSDKAHGISVETAIAKFFALFCGWADYNPKDWSSAPFKRASSDFPTTIRMR
Ga0187778_108795001	3300017961	Tropical Peatland	MQPLLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGISGETAMAKFFRLFWGWADYTPKDWSSAPYKRAYSD
Ga0187777_100329322	3300017974	Tropical Peatland	MQTLLVDLILVAALGAIFLIARRGYWNYARPLSDNASGTANFFGSFWGWADYKPKDWSSAPYKRASSNSPKTIRMRHH
Ga0187777_102619383	3300017974	Tropical Peatland	MQPLLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGISGETAMAKFFRLFWGWADYTPKDWSSAPYKRAYSDFPKTIRMHH
Ga0187766_100262032	3300018058	Tropical Peatland	MQPLLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGIFGETAMAKFFRLFWGWADYTPKDWSSAPYKRAYSDFPKTIRMHH
Ga0187766_100354182	3300018058	Tropical Peatland	MQTLLVDLILVAALGAIFLIARRGYWNYARPLSDNASGTANFFGSFWGWADYKPKDWSSASYKRASLNSPKTIRMRHH
Ga0184625_100658493	3300018081	Groundwater Sediment	MRCLKMQTLLVDLILAAAVGVVFLIARRSKNWGYVPRLSGKTVGTLANFFALFWGWADYNPKDWSSAPFKRGYGDERRRSKIVYR
Ga0187769_100311957	3300018086	Tropical Peatland	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDEARVISGQAAMAKFFALFWGWADYTPKDWSNAPYKRASSDFPRTIRTRQG
Ga0066662_111423882	3300018468	Grasslands Soil	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISRETAIAKFFALFWGWADYKPKDWSNAPYKRASSDFPTTIRMRHW
Ga0210400_105557172	3300021170	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGLSGETAIAKFFALFWGWADYNPKDWSNAPYKRASSDFPTTIRMR
Ga0210384_101488504	3300021432	Soil	MQTLLVDLTLAAVAGAVFLIARRSKNWGYMPRLSGKTGGISVGETAIAKFFALFWGWADYTPKDWSNAPYKREHSAGRASSVSYGSA
Ga0210384_109261692	3300021432	Soil	MQTLFVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGLSGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFSTTIRMR
Ga0126371_101565664	3300021560	Tropical Forest Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKRAFLD
Ga0126371_102744535	3300021560	Tropical Forest Soil	VLKMQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTIRVRHG
Ga0126371_108569041	3300021560	Tropical Forest Soil	VFAGGVLKMQTSLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGSGETAIAKFFALFWGWADYTPKDWSSAPYKRAASDFPTTIRMRH
Ga0212123_100289732	3300022557	Iron-Sulfur Acid Spring	MQTLLVDLILAAAVAAVFLIALRPKTPIAVLYGDYTHRRSGKARGISGETAMAKFFALFWGWADYNPKDWSSAPYKRGYAS
Ga0212123_101375833	3300022557	Iron-Sulfur Acid Spring	MQTLLVDLTLAAVAGAVFLIARRSKNWGYMPRLSGKTGGISVGETAIAKFFALFWGWADYTPKDWSNAPYKREHSAGRASSVSYRSA
Ga0224572_10136813	3300024225	Rhizosphere	MQTLLVDLILAAAVGAVFLIARRPNTPIAVLYSDYASRLSGKVPGISMAKFSALFWGWADYKPKDWSSAPYKRERPRRSEKITYRTG
Ga0207693_102469401	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGLSGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFSTTIRMR
Ga0209593_101204883	3300027743	Freshwater Sediment	MQTLLVDLILAAAVGVVFLIARRSKNWGYLPRLSGKTVGRLANFFALFWGWADYNPKDWSSAPF
Ga0209656_104203021	3300027812	Bog Forest Soil	MQTLLVDLILAAGVGAVFLIALRSKNWGYVPRLSGKTGETALSNFFALFWGWADYNPKDWSSAPYKRGYGDERRR
Ga0209040_102771162	3300027824	Bog Forest Soil	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPFKRASSDFPTTIRMR
Ga0209814_101241832	3300027873	Populus Rhizosphere	MRCLKMQTLLVDLILAAAVAVVFLIARRSKNWGYVLRLSGKTGSTLANFFALFWGWADYNPKDWSSAPYKRGYGDERRRSTIVYR
Ga0209465_100658531	3300027874	Tropical Forest Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGSGETAIAKFFALFWGWADYTPKDWSSAPYKRASSDFPTTIRMRH
Ga0209583_107389222	3300027910	Watersheds	MQTLLVALILAAIVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR
Ga0209698_111600171	3300027911	Watersheds	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFPTTIRMR
Ga0209069_101873642	3300027915	Watersheds	MQTLLVNLIFFAVVGAVFLIARRSKNWRYVPRLSGKTGGISGETALASFFALFWGWADYNPMDWSSAPYKRGYGDERRRSTIVYR
Ga0209069_109453262	3300027915	Watersheds	MQTLLVALILAAVVGAVFLIARRGYWGYAQRLSDKAHGISGETAIAKFFALFWGWADYKPKDWSSAPYKRASSDFST
Ga0307301_101336052	3300028719	Soil	MQTLLVDLILAAAVGVVFLIARRSKNWGYVPRLSGKTGDTLANFFALFWGWADYSPKNWSSAPYKRGYGDERRRSTIVYR
Ga0222749_108454552	3300029636	Soil	LKMQTLFVALILAAVVAAVFLIARRGYWGYAQRLSDKAHGLSGETAIAKFFALFWGWADYNPKDWSSAPYKRASSDFSTTIRMR
Ga0170818_1050319182	3300031474	Forest Soil	MQTLLVDLILAAGVGAIFLIALRSKNWGYVPRLSGKTGETALSNFFALFWGWADYNPKDWSSAPYKRGYGDERRRSTIVYR
Ga0318541_108327021	3300031545	Soil	RITSARRCADVVWRRCLKMQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDKAGGSGETAIAKFFALFWGWADYTPKDWSSAPYKRAFSDSSTTIRMRHG
Ga0310915_100478653	3300031573	Soil	MQTLLILAAVVGAAFLIARRGYWGYPQRLSDEARGSGETAMARFFALFWSWADYAPKDWSSASYKRTSFFPTTIRMRHG
Ga0310915_107864812	3300031573	Soil	MQSLLVALILAAVVGAVFLIARRGYWGYPQRISDEARSISGETGLAKFFALFWGWADYTPKDWSNAPYKRGSSDFPKTIRIRH
Ga0306917_112729812	3300031719	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDKAGGSGETAIAKFFALFWGWADYTPKDWSSAPYKRAFSDSSTTIRMRHG
Ga0318500_104148501	3300031724	Soil	MQTSLVALILTAVVGAVFLIARRGYWGYAQRLSDEARGSGETAIAKFFALFWGWADYTPKDWSSAPYKRAASDFPTTIRMRH
Ga0306918_115589692	3300031744	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDEARSISGETPIAKFFALFWGWADYTPKDWSSAPYKRASSGFSTTIRMRHG
Ga0310917_100511443	3300031833	Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRLSDKAGGSGETAIAKFFALFWGWADYTPKDWSSAPYKRASSGFSTTIRMRHG
Ga0306919_111910041	3300031879	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDEARSISGETPIAKFFALFWGWADYTPKDWSSAPYKRASSDFSTTIRMRHG
Ga0306925_101793655	3300031890	Soil	MPTLLVDLILAVAVGAVFLIARRPKTPIAVLYRDYVQRLSGKARGFPGETALAKFYRLFWGWAAYN
Ga0306925_105949241	3300031890	Soil	VFAGGVLKMQTSLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGSGETAIAKFFALFWGWADYTPKDWSNAPYKRASKDFSKTIRVRH
Ga0306923_100825032	3300031910	Soil	MPTLLVDLILAAAVGAVFLIALRPKTPIAVLYRDYAQRLSGKARPLSGKVRGIPGETALAKFYRLFWGWADYNPKDWSNAPYKRGYADQPKR
Ga0306923_110620452	3300031910	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDKAGGSGERAIAKFFALFWGWADYTPKDWSSAPYKRAFSDSSTTIRMRHG
Ga0306921_108018942	3300031912	Soil	LIALRPKTPIAVLYRDYAQRLSGKARPLSGKVRGIPGETALAKFYRLFWGWADYNPKDWSNAPYKRGYADQPKR
Ga0306921_123606082	3300031912	Soil	MQTLVIVAAVMGAAFLIARRGYWGYPQRFSDEAHGSRETGMARFFASFWGWADYTPQDWSSAPYKRAFSDFS
Ga0306921_126520251	3300031912	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDEARSISGETPIAKFFALFWGWADYTPKDWSSAPYKRASSGF
Ga0310912_106794482	3300031941	Soil	MQSLLVALILAAVVGAVFLIARRGYWGYQQRVSDEARSISGETGLAKFFALFWGWADYTPKDWSNAPYKRGSSDFPKTIRIRH
Ga0306926_103670562	3300031954	Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKRASSGFSTTIRMRHG
Ga0306926_104715891	3300031954	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYSQRLSDKTGGSGQTAIATFFALFWGWADYTPKDWSSAPYKRAFSDSSTTIRMRHG
Ga0306926_116386891	3300031954	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDEARSISGETPIAKFFALFWGWADYTPKDWSSAPYK
Ga0306926_119897841	3300031954	Soil	MQTSLVALILTAVVGAVFLIARRGYWGYAQRLSDEARGSGETAIAKFFALFWGWADYTPKDWSSAPYKRASSDFPTTIRMR
Ga0318513_104385041	3300032065	Soil	MQTWLVALILAAAVGAVFLIARRGYWGYPQRLSDEARGSGETAMARFFALFWSWADYAPKDWSSASYKRTSFFPTTIRMRHG
Ga0318514_105288811	3300032066	Soil	SLLVALILAAVVGAVFLIARRGYWGYQQRVSDEARSISGETPIAKFFALFWGWADYTPKDWSSAPYKRASSDFSTTIRMRHG
Ga0306924_100678527	3300032076	Soil	MPTLLVDLILAAAVGAVFLIALRPKTPIAVLYRDYAQRLSGKARPLSGKVRGIPGETALAKFYRLFWGWADYNPKDWS
Ga0306924_121471522	3300032076	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYSQRLSDKAGGSGETAIAKFFALFWGWADYTPKDWSSAPYKRAFSDSSTTIRMRHG
Ga0311301_104717355	3300032160	Peatlands Soil	MQTLLVDLILAAAVGAVFLIARRPNTPIAVLYSDYASRLSGKAPGISMAKFSALFWGWADYKSKDWSSAPYKRERPRRSEKITYRTG
Ga0306920_1017024651	3300032261	Soil	MQTLLVALILAAVVGAVFLIARRGYWGYPQRLSDKAGGSGERAIAKFFALFWGWADYTPKDWSSAPYKRAF
Ga0306920_1020264791	3300032261	Soil	MPTLLVDLILAVAVGAVFLIARRPKTPIAVLYRDYVQRLSGKARGFPGETALAKFYRFFWGW
Ga0306920_1022371052	3300032261	Soil	MQTSLVALILAAVVGAVFLIARRGYWGYPQRVSDEARGSGETAIAKFFAWFWGWADYTPKDWSSAPYKRAFLDSSKTI
Ga0306920_1032139952	3300032261	Soil	RFGDYRAVFAGGVLKMQTSLVALILAAVVGAVFLIARRGYWGYPQRLSDEARGSGETAIAKFFALFWGWADYTPKDWSSAPYKRAASDFPTTIRMRH
Ga0318519_110831322	3300033290	Soil	LVALILAAVVGVVFLIARRGYWGYPQRLSDEARSISGETPIAKFFALFWGWADYTPKDWSSAPYKRAFSDSSTTIRMRHG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056819

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences