Metagenome / Metatranscriptome Family F056814

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056814
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	62 residues
Representative Sequence	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSAQASPISHYGDYLFVADRAGPV
Number of Associated Samples	78
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.88 %
% of genes near scaffold ends (potentially truncated)	43.80 %
% of genes from short scaffolds (< 2000 bps)	86.86 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.453 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.307 % of family members)
Environment Ontology (ENVO)	Unclassified (66.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.394 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 38.81% Coil/Unstructured: 61.19%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF03404	Mo-co_dimer	3.65
PF02582	DUF155	1.46
PF13185	GAF_2	1.46
PF00174	Oxidored_molyb	1.46
PF04367	DUF502	0.73
PF00589	Phage_integrase	0.73
PF17158	MASE4	0.73
PF07040	DUF1326	0.73
PF01569	PAP2	0.73
PF11845	DUF3365	0.73
PF01391	Collagen	0.73
PF08042	PqqA	0.73
PF04392	ABC_sub_bind	0.73
PF00501	AMP-binding	0.73
PF00027	cNMP_binding	0.73
PF09851	SHOCT	0.73
PF13545	HTH_Crp_2	0.73
PF13417	GST_N_3	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1723	Mitochondrial translation protein, Rmd1/RMND1/DUF155 family	Translation, ribosomal structure and biogenesis [J]	1.46
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	1.46
COG3915	Uncharacterized conserved protein	Function unknown [S]	1.46
COG2928	Uncharacterized membrane protein	Function unknown [S]	0.73
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.73
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
All Organisms	root	All Organisms	25.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
cellular organisms	root	All Organisms → cellular organisms	25.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.98 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.87 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.11 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.73 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.46 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.73 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.73 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.46 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.73 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.73 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.73 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.73 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.73 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.73 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.73 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.45 %
Bosea sp. BK604	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BK604	0.73 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.73 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	0.73 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.73 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10020332	Not Available	1823	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10030735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1451	Open in IMG/M
3300005332\|Ga0066388_100934908	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300005332\|Ga0066388_102685018	Not Available	908	Open in IMG/M
3300005363\|Ga0008090_15179481	Not Available	636	Open in IMG/M
3300005436\|Ga0070713_100442497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1219	Open in IMG/M
3300005439\|Ga0070711_100034147	All Organisms → cellular organisms → Bacteria	3392	Open in IMG/M
3300005713\|Ga0066905_102310176	Not Available	503	Open in IMG/M
3300005764\|Ga0066903_104224485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300005764\|Ga0066903_105722585	Not Available	653	Open in IMG/M
3300005764\|Ga0066903_106012566	Not Available	636	Open in IMG/M
3300005764\|Ga0066903_106017327	Not Available	635	Open in IMG/M
3300005764\|Ga0066903_107970604	Not Available	543	Open in IMG/M
3300006047\|Ga0075024_100109181	Not Available	1222	Open in IMG/M
3300006059\|Ga0075017_100818024	Not Available	720	Open in IMG/M
3300006174\|Ga0075014_100529900	Not Available	663	Open in IMG/M
3300009792\|Ga0126374_10222488	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
3300010048\|Ga0126373_10189356	All Organisms → cellular organisms → Bacteria → Proteobacteria	1986	Open in IMG/M
3300010048\|Ga0126373_13248525	Not Available	506	Open in IMG/M
3300010359\|Ga0126376_13053101	Not Available	517	Open in IMG/M
3300010361\|Ga0126378_11361350	Not Available	803	Open in IMG/M
3300010361\|Ga0126378_12340934	Not Available	610	Open in IMG/M
3300010366\|Ga0126379_10393033	Not Available	1432	Open in IMG/M
3300010376\|Ga0126381_101787537	Not Available	887	Open in IMG/M
3300010376\|Ga0126381_104606535	Not Available	531	Open in IMG/M
3300012971\|Ga0126369_12887703	Not Available	563	Open in IMG/M
3300016270\|Ga0182036_10032828	All Organisms → cellular organisms → Bacteria	3107	Open in IMG/M
3300016270\|Ga0182036_10223533	Not Available	1394	Open in IMG/M
3300016270\|Ga0182036_10742991	Not Available	796	Open in IMG/M
3300016270\|Ga0182036_10892039	Not Available	728	Open in IMG/M
3300016270\|Ga0182036_10905150	Not Available	723	Open in IMG/M
3300016294\|Ga0182041_10424639	Not Available	1137	Open in IMG/M
3300016319\|Ga0182033_10171973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1696	Open in IMG/M
3300016319\|Ga0182033_10613344	Not Available	946	Open in IMG/M
3300016319\|Ga0182033_11274551	Not Available	660	Open in IMG/M
3300016319\|Ga0182033_11632525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	583	Open in IMG/M
3300016319\|Ga0182033_11806990	Not Available	555	Open in IMG/M
3300016371\|Ga0182034_10038094	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300016371\|Ga0182034_11137385	Not Available	678	Open in IMG/M
3300016387\|Ga0182040_11198057	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300016404\|Ga0182037_10544281	Not Available	979	Open in IMG/M
3300016404\|Ga0182037_11936412	Not Available	528	Open in IMG/M
3300016404\|Ga0182037_12168062	Not Available	500	Open in IMG/M
3300016422\|Ga0182039_10059508	Not Available	2645	Open in IMG/M
3300016445\|Ga0182038_10469189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1068	Open in IMG/M
3300017924\|Ga0187820_1198294	Not Available	625	Open in IMG/M
3300018001\|Ga0187815_10393961	Not Available	589	Open in IMG/M
3300021420\|Ga0210394_11567801	Not Available	555	Open in IMG/M
3300021560\|Ga0126371_10242826	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300021560\|Ga0126371_10537894	Not Available	1317	Open in IMG/M
3300021560\|Ga0126371_10759461	Not Available	1117	Open in IMG/M
3300021560\|Ga0126371_10826554	Not Available	1072	Open in IMG/M
3300021560\|Ga0126371_11982551	Not Available	700	Open in IMG/M
3300021560\|Ga0126371_12605250	Not Available	613	Open in IMG/M
3300025916\|Ga0207663_10375892	Not Available	1081	Open in IMG/M
3300025928\|Ga0207700_10139882	Not Available	1988	Open in IMG/M
3300027003\|Ga0207722_1024705	Not Available	657	Open in IMG/M
3300027070\|Ga0208365_1022570	Not Available	814	Open in IMG/M
3300027703\|Ga0207862_1122251	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300027703\|Ga0207862_1230095	Not Available	546	Open in IMG/M
3300027874\|Ga0209465_10458694	Not Available	637	Open in IMG/M
3300027910\|Ga0209583_10245391	Not Available	787	Open in IMG/M
3300027915\|Ga0209069_10036367	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2305	Open in IMG/M
3300031057\|Ga0170834_109842004	Not Available	936	Open in IMG/M
3300031543\|Ga0318516_10227409	Not Available	1078	Open in IMG/M
3300031545\|Ga0318541_10031570	Not Available	2628	Open in IMG/M
3300031545\|Ga0318541_10344795	Not Available	832	Open in IMG/M
3300031572\|Ga0318515_10546676	Not Available	617	Open in IMG/M
3300031572\|Ga0318515_10553059	Not Available	613	Open in IMG/M
3300031573\|Ga0310915_10214166	All Organisms → cellular organisms → Bacteria → Proteobacteria	1349	Open in IMG/M
3300031573\|Ga0310915_10256721	Not Available	1230	Open in IMG/M
3300031573\|Ga0310915_10590837	Not Available	787	Open in IMG/M
3300031573\|Ga0310915_10846990	Not Available	642	Open in IMG/M
3300031573\|Ga0310915_11232437	Not Available	517	Open in IMG/M
3300031668\|Ga0318542_10173633	Not Available	1079	Open in IMG/M
3300031681\|Ga0318572_10499405	Not Available	725	Open in IMG/M
3300031682\|Ga0318560_10754765	Not Available	525	Open in IMG/M
3300031719\|Ga0306917_10832960	Not Available	723	Open in IMG/M
3300031719\|Ga0306917_11512171	Not Available	516	Open in IMG/M
3300031744\|Ga0306918_10099408	Not Available	2067	Open in IMG/M
3300031744\|Ga0306918_10195301	Not Available	1522	Open in IMG/M
3300031748\|Ga0318492_10574099	Not Available	601	Open in IMG/M
3300031753\|Ga0307477_10107221	Not Available	1944	Open in IMG/M
3300031770\|Ga0318521_10375855	Not Available	845	Open in IMG/M
3300031770\|Ga0318521_10656476	Not Available	636	Open in IMG/M
3300031770\|Ga0318521_10971445	Not Available	520	Open in IMG/M
3300031771\|Ga0318546_11189935	Not Available	535	Open in IMG/M
3300031777\|Ga0318543_10386670	Not Available	627	Open in IMG/M
3300031792\|Ga0318529_10341687	Not Available	697	Open in IMG/M
3300031805\|Ga0318497_10733442	Not Available	554	Open in IMG/M
3300031831\|Ga0318564_10411036	Not Available	592	Open in IMG/M
3300031833\|Ga0310917_10110729	Not Available	1777	Open in IMG/M
3300031835\|Ga0318517_10505259	Not Available	544	Open in IMG/M
3300031879\|Ga0306919_10292298	Not Available	1235	Open in IMG/M
3300031879\|Ga0306919_10791827	Not Available	729	Open in IMG/M
3300031879\|Ga0306919_11200084	Not Available	576	Open in IMG/M
3300031890\|Ga0306925_10094349	All Organisms → cellular organisms → Bacteria	3179	Open in IMG/M
3300031890\|Ga0306925_10300705	Not Available	1726	Open in IMG/M
3300031890\|Ga0306925_10669441	Not Available	1089	Open in IMG/M
3300031890\|Ga0306925_10712428	Not Available	1049	Open in IMG/M
3300031910\|Ga0306923_10227662	All Organisms → cellular organisms → Bacteria → Proteobacteria	2132	Open in IMG/M
3300031910\|Ga0306923_10360927	Not Available	1656	Open in IMG/M
3300031912\|Ga0306921_10089202	All Organisms → cellular organisms → Bacteria	3559	Open in IMG/M
3300031912\|Ga0306921_10237720	Not Available	2134	Open in IMG/M
3300031912\|Ga0306921_10679487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1185	Open in IMG/M
3300031912\|Ga0306921_10996689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	945	Open in IMG/M
3300031941\|Ga0310912_10016401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4808	Open in IMG/M
3300031941\|Ga0310912_10131916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1870	Open in IMG/M
3300031941\|Ga0310912_10530539	Not Available	917	Open in IMG/M
3300031942\|Ga0310916_10879232	Not Available	752	Open in IMG/M
3300031945\|Ga0310913_10084399	All Organisms → cellular organisms → Bacteria → Proteobacteria	2124	Open in IMG/M
3300031945\|Ga0310913_10368951	Not Available	1017	Open in IMG/M
3300031946\|Ga0310910_10540883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	924	Open in IMG/M
3300031946\|Ga0310910_10906958	Not Available	691	Open in IMG/M
3300031946\|Ga0310910_11483260	Not Available	520	Open in IMG/M
3300031954\|Ga0306926_12697413	Not Available	539	Open in IMG/M
3300032001\|Ga0306922_10962080	Not Available	883	Open in IMG/M
3300032001\|Ga0306922_11080765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300032025\|Ga0318507_10374585	Not Available	620	Open in IMG/M
3300032044\|Ga0318558_10037871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BK604	2076	Open in IMG/M
3300032052\|Ga0318506_10012128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2924	Open in IMG/M
3300032052\|Ga0318506_10555358	Not Available	508	Open in IMG/M
3300032060\|Ga0318505_10270420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300032067\|Ga0318524_10381093	Not Available	734	Open in IMG/M
3300032076\|Ga0306924_11033304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	900	Open in IMG/M
3300032076\|Ga0306924_11528060	Not Available	707	Open in IMG/M
3300032076\|Ga0306924_11700155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300032090\|Ga0318518_10626952	Not Available	548	Open in IMG/M
3300032091\|Ga0318577_10639575	Not Available	505	Open in IMG/M
3300032261\|Ga0306920_100015383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10485	Open in IMG/M
3300032261\|Ga0306920_100399585	All Organisms → cellular organisms → Bacteria → Proteobacteria	2043	Open in IMG/M
3300032261\|Ga0306920_100815938	Not Available	1368	Open in IMG/M
3300032261\|Ga0306920_101407108	Not Available	999	Open in IMG/M
3300033289\|Ga0310914_10593176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300033290\|Ga0318519_10283859	Not Available	966	Open in IMG/M
3300033290\|Ga0318519_11053315	Not Available	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.89%
Aquatic	Environmental → Aquatic	5.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.89%
Sediment	Environmental → Aquatic → Sediment	3.65%
Freshwater	Environmental → Aquatic → Freshwater	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.48%
Loam	Environmental → Terrestrial → Soil → Loam	12.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.46%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.46%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.73%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100203324	3300000597	Forest Soil	MRTLFVAAVGVFALIGVDGWLCIRTMTPGALARSSILNPLIATTSAQASPISHYGDYLFVADRAGPV*
AF_2010_repII_A1DRAFT_100307353	3300000597	Forest Soil	MRTLFVAAVAVLVVISIDGWLCLRTLTPGALARSPTFNPLIATTSAQVSPISHYGDYLFLADRAGPV*
Ga0066388_1009349081	3300005332	Tropical Forest Soil	MRTLFVAVVAVLVVIGIDGWLCLKTMTPGALAGSSAFNSLLATTSAQASPISHHGYLFVADRAGPL*
Ga0066388_1026850181	3300005332	Tropical Forest Soil	MRTLFVAAVAVLVVISIDGWLCLRTLTPGALARSPTFNALIATTSAQGDHLF*
Ga0008090_151794812	3300005363	Tropical Rainforest Soil	MRTLFVAAVAVLVVISIDGWLCLRTLTPGALTRSPTFNPLIVTTGAKASPISHYSGYLFSGYLFLFD*
Ga0070713_1004424971	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLFVAVVAVLVVIGIDGWLCLRTLTPGALARSPNFNPLIVATSAQASPISALW*
Ga0070711_1000341475	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLFVAVVAVLIVIGIDGWLCLRTLTPGALARSPNFNPLIVATSAQASPISDYGDYLFVSDRAGPL*
Ga0066905_1023101761	3300005713	Tropical Forest Soil	MRTLFVAAVAVLVLIGIDGWLCSRTLTPSTLARSSTFNPLIITTAAKASSISHHSDYLF*
Ga0066903_1042244852	3300005764	Tropical Forest Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISHYSDYLFVGVRTGPV*
Ga0066903_1057225851	3300005764	Tropical Forest Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISHYGDYLFAGDRAGPV*
Ga0066903_1060125661	3300005764	Tropical Forest Soil	VRTLLVAAVGVLVVIGIDGWLCLRTLTPGPLVRSPTFNPLIVATSAQASPMSHYGDYP
Ga0066903_1060173272	3300005764	Tropical Forest Soil	MRTLFVAAVGVFVLIGIDAWLCIRTMTPGALVRSSIFNPLIATTSAQASPISHHSDYLFIVDRAGPV*
Ga0066903_1079706041	3300005764	Tropical Forest Soil	MLFVAALAVFVLIGVDAWLCIGTMTPGALARSSIFNPLIATTSAQASPIS
Ga0075024_1001091813	3300006047	Watersheds	MRTLFVAVVAVLVVIGIDGWLCLRTLTAGALARSQNFNPLIVATSAQASPISHYGDYLFVSDRAGPL*
Ga0075017_1008180242	3300006059	Watersheds	MRTLFVAVVAVLVVIGIDRWLCLRTLTPGALARSPNFNPLIVATSAQASPISHYGDYLFVSDRAGPL*
Ga0075014_1005299002	3300006174	Watersheds	MRTLFVAVVAVLVVIGIDGWLCLRTLTPGALARSPNFNPLIVATSAQASPISHYGDYLFVSDRAGPL*
Ga0126374_102224881	3300009792	Tropical Forest Soil	MRTLFVAALAVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISHYGDYLL*
Ga0126373_101893563	3300010048	Tropical Forest Soil	MRTLFVAAVALLVVIGIDGWLCLRTLTLGVLVRSPTFNPLIVTTSAQASPISHYGDYLFVSDRAGRL*
Ga0126373_132485251	3300010048	Tropical Forest Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSVQASPVAHYGDYLFVADRSGPL*
Ga0126376_130531011	3300010359	Tropical Forest Soil	MRTLFVAALAVFVLIGVDAWLCIGTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVADRAGPL*
Ga0126378_113613501	3300010361	Tropical Forest Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVADRAGPVQSSARR*
Ga0126378_123409342	3300010361	Tropical Forest Soil	MSALFVAALAVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQ
Ga0126379_103930332	3300010366	Tropical Forest Soil	MRTLFVAAVGVFALIGVDAWLCIRTMTPGALARSSILNPLIATTSAQASPISHYGDYLFVADRAGPD*
Ga0126381_1017875372	3300010376	Tropical Forest Soil	MRTLFVAAVAVLVLIGIDGWLCSRTLTPGTLARSSTFNPLISTTAAKASSISHHSDYLF*
Ga0126381_1046065351	3300010376	Tropical Forest Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV*
Ga0126369_128877032	3300012971	Tropical Forest Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSILNPLIATTSAQASPISHYGDYLFVADRAGPV*
Ga0182036_100328281	3300016270	Soil	AVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQVSPISHYGDYLFLADRAGPV
Ga0182036_102235331	3300016270	Soil	MRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQA
Ga0182036_107429911	3300016270	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQ
Ga0182036_108920393	3300016270	Soil	MRTLLVAAVGVLVVIGIDGWLCLRTLTPGPLVRSPTFNPSIVTTSAQASPISHYGDYLFVSDGLGRFKIF
Ga0182036_109051501	3300016270	Soil	MRTLFVAAVAVLVVISIDGWLCLRTLTPGALARSPTFNPLIATTSAQVSPISHYGDYLFLADRARPV
Ga0182041_104246391	3300016294	Soil	TLFVAAVAVLVVIGIDGWLCFRTLTPGALARSSTFNPLIATTTSAQASPISHYGDYLFVADRAGAL
Ga0182033_101719731	3300016319	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVADRA
Ga0182033_106133441	3300016319	Soil	GGAMRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV
Ga0182033_112745511	3300016319	Soil	MRTLFVVAVLVVIGIDGWLCLKTMTPGALARSSTFNPLLATTSAQASPISHHSDYLFVAD
Ga0182033_116325251	3300016319	Soil	CRGGAMRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSAQASPISHYGDYLFVADRAGPV
Ga0182033_118069902	3300016319	Soil	MRTLLVAAVGVLVVIGIDGWLCLRTLTPGPLVRSPTFNPLIVTTSAQASPISHYGDYLFVSDR
Ga0182034_100380944	3300016371	Soil	FVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV
Ga0182034_111373853	3300016371	Soil	MRTLFVVAVLVVIGIDGWLCLKTMTPGALARSSTFNPLLATTSAQASPISHHSDYLFV
Ga0182040_111980571	3300016387	Soil	MRFVAAVAVLVVISIDAWLCLRTLTPGALARSPTFNPLIATAGAQVSPISHYGD
Ga0182037_105442812	3300016404	Soil	MRTLFVAAVAALVVIGIDGWLCLRTLTPGALARSSAFNPLIATTSAQASPISHYGDYLFVADRAGPV
Ga0182037_119364121	3300016404	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQA
Ga0182037_121680621	3300016404	Soil	LNARGSAMRTVLVAAVGVLVVIGFDGWLCLRTLTPGPLVRSPTFNPLIVTTSAQALPISHYGDYLFVADRA
Ga0182039_100595083	3300016422	Soil	VAAVGVFVLIGVDTWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV
Ga0182038_104691893	3300016445	Soil	MRTLFVAAVALLVVIGIDGWLCLRTLTLGVLVRSPTFNPLIVTTSAQASPISHHGDYLFVADRAGPL
Ga0187820_11982942	3300017924	Freshwater Sediment	MRTLFVAVVAVLVVIGIDGWLCLRTLTPGALARSPNFNPSIVATSAHASPISHYGDYLFVSDRAGPL
Ga0187815_103939612	3300018001	Freshwater Sediment	VNDRRTKARTLFVAVVAVLVVIGIDGWLCLRTLTPGALARSPNFNPSIVATSAHASPISHYGDYLFVSDRAGPL
Ga0210394_115678011	3300021420	Soil	MRTLFVAVVAVLVVIGIDGWLCLRTLTPGALARSPNFNPLIVATSAQASPISHYGD
Ga0126371_102428262	3300021560	Tropical Forest Soil	MRTLFVAAVAVLVVISIDGWLCLRTLTPGALARSPTFNPLIATTSAQVSPISHYGDYLFLADRAGPV
Ga0126371_105378942	3300021560	Tropical Forest Soil	MRTLFVAAIGVFALIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISHYGDYLFAGDRAGPV
Ga0126371_107594612	3300021560	Tropical Forest Soil	MRTLFVAAVGVFVLIGIDAWLCIRTMTPDALVRSTIFNPLIATTSAQASPISHRSDYLFIVDRTGPV
Ga0126371_108265541	3300021560	Tropical Forest Soil	MRILFVVAVGVFVLIGIDAWLCIRTMTPGALVRSSIFNPLIATTSAQASPISHHSDYLFIVDRAGPV
Ga0126371_119825512	3300021560	Tropical Forest Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSVQASPVAHYGDYLFVADRSGPL
Ga0126371_126052502	3300021560	Tropical Forest Soil	MRTMLVAAVGVLIVIGFDGWLCLRTLTPGPLVRSPTFNPLIVTTSAQALPISHYGDYLFVADRAGPD
Ga0207663_103758921	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLFVAVVAVLIVIGIDGWLCLRTLTPGALARSPNFNPLIVATSAQASPISDYGDYLFVSDRAGPL
Ga0207700_101398823	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRTLFVAVVAVLVVIGIDGWLCLRTLTPGALARSPNFNPLIVATSAQASPISALW
Ga0207722_10247052	3300027003	Tropical Forest Soil	MRTLFVAAVAVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISHYGDYLFVADRAGPL
Ga0208365_10225701	3300027070	Forest Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSPTFNPLIITTSAQPSPISHYLFVSDRAGPL
Ga0207862_11222511	3300027703	Tropical Forest Soil	IECRGGAMRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSAFNPLIATTSAQASPISHYGDYLFVADRAGPL
Ga0207862_12300951	3300027703	Tropical Forest Soil	MRTLFVAAVAVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISHHGDYLFIADRAGPV
Ga0209465_104586942	3300027874	Tropical Forest Soil	MRTLFVAAVGVFVLIGIDAWLCIRTMTPGALARSSIFNPLIATTSAQVSPISHYGDYLFLADRAGPV
Ga0209583_102453912	3300027910	Watersheds	MRTLFVAVVAVLVVIGIDGWLCLRTLTPGALARSPNFNPLIVATSAHASPISHYGDYLFVSDRAGPL
Ga0209069_100363672	3300027915	Watersheds	MRTLFVAVVAVLVVIGIDGWLCLRTLTAGALARSQNFNPLIVATSAQASPISHYGDYLFVSDRAGPL
Ga0170834_1098420042	3300031057	Forest Soil	MRTLFVAVVAVLVVIGIDGWLCLRTLTPGALARSPNFNPLIVVTSAQASPISHYGDYLFVSDRAGPL
Ga0318516_102274092	3300031543	Soil	MRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVAERAGPV
Ga0318541_100315703	3300031545	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVAERAGPV
Ga0318541_103447952	3300031545	Soil	MRTLFVAAVALLVVIGIDGWLCLRTLTLGVLVRSPTFNPLIVTTSAQASPISHY
Ga0318515_105466762	3300031572	Soil	MRTLFVAAVALLVVIGIDGWLCLRTLTLGVLVRSPTFNPLIVTTSAQASPISHYGDYLFVSDRAGRL
Ga0318515_105530592	3300031572	Soil	MRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFV
Ga0310915_102141661	3300031573	Soil	MRTLFVAAVALLVVIGIDGWLCLRTLTLGVLVRSPTFNPLIVTTSARASPISHYGDYLFV
Ga0310915_102567214	3300031573	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSAQASPISHYGDYLFVADRAGPV
Ga0310915_105908372	3300031573	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSAFNPLIATTSAQASPISHYGDYLFVADRAGPL
Ga0310915_108469902	3300031573	Soil	MRTLFVAVVAVLVVIGIDGWLCLKTMTPGALVRSSTFNSLLATTSAQASPISHHGDYLFVADRAGPL
Ga0310915_112324372	3300031573	Soil	MRTLLVAAVGVLVVIGIDGWLCLRTLTPGPLVRSPTFNPLIVTTSAQASPISHYGDYLFVSDRAGRL
Ga0318542_101736332	3300031668	Soil	MRTLFVAAVALLVVIGIDGWLCLRTLTLGVLVRSPTFNPLIVTTSARASPISHYGDYLFVSDRAGRL
Ga0318572_104994052	3300031681	Soil	MRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVADRAGPV
Ga0318560_107547652	3300031682	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVADRAGPV
Ga0306917_108329601	3300031719	Soil	MRTVLVAAVGVLVVIGFDGWLCLRTLTPGPLVRSPTFNPLIVTMSAQASPISHYGDYLFV
Ga0306917_115121711	3300031719	Soil	MRSLLIAALAVFVLIGVDAWLCIRTMTPGALAKSSIFNPLIATTGAQASPISHYGDYLL
Ga0306918_100994082	3300031744	Soil	MRFVAAVAVLVVISIDAWLCLRTLTPGALARSPTFNPLIATAGAQVSPISHYGDYLFVADRAGPV
Ga0306918_101953012	3300031744	Soil	MRMLFFAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVAERAGPV
Ga0318492_105740991	3300031748	Soil	VAVLVVIGIDGWLCLRTLTPGPLVRSPTFNPLIVTTSAQASPISHYGDYLFVSDRAGRL
Ga0307477_101072213	3300031753	Hardwood Forest Soil	MRTLFVAVVAVLVVIGIDGWLCLRTLTPGALARSPNFNPLIVATSAQASPISHYGDYLFVSDRAGPIVFAE
Ga0318521_103758552	3300031770	Soil	MRTLFVAAVALLVVIGIDGWLCLRTLTLGVLVRSPTFNPLIVTTSARASPISHYGD
Ga0318521_106564762	3300031770	Soil	GVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV
Ga0318521_109714452	3300031770	Soil	MRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYG
Ga0318546_111899351	3300031771	Soil	MRTVLVAAVGVLVVIGFDGWLCLRTLTPGPLVRSPTFNPLIVTMSAQASPISHYGDYLFVDERAGPV
Ga0318543_103866702	3300031777	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPN
Ga0318529_103416872	3300031792	Soil	RGGAMRFVAAVAVLVVISIDAWLCLRTLTPGALARSPTFNPLIATAGAQVSPISHYGDYLFVADRAGPV
Ga0318497_107334421	3300031805	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDY
Ga0318564_104110363	3300031831	Soil	AVAVLVVISIDGWLCLRTLTPGALARSPTFNPLIATTSAQVSPISHYGDYLFLADRAGPV
Ga0310917_101107293	3300031833	Soil	MRFVAAVAVLVVISIDGWLCLRTLTPGALARSPTFNPLIATAGAQVSPISHYGDYLFVADRAGPV
Ga0318517_105052592	3300031835	Soil	MRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVADRA
Ga0306919_102922981	3300031879	Soil	MRSLLIAALAVSVLIGVDAWLCIRTMTPGALAKSSIFNPLIATTGAQASPISHYGDYLL
Ga0306919_107918272	3300031879	Soil	MRTLFVAAVAVLVVIGIDGWLCFRTLTPGALARSSTFNPLIATTTSAQASPISHYGDYLFVADRA
Ga0306919_112000841	3300031879	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNS
Ga0306925_100943492	3300031890	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV
Ga0306925_103007052	3300031890	Soil	MRTLFVAAVAVLVVIGIDGWLCFRTLTPGALARSSTFNPLIATTTSAQASPISHYGDYLFVADRAGAL
Ga0306925_106694412	3300031890	Soil	MRTLFVAAVAVLVVIGIDGWPCLRTLTPGAPARSPTFNPLIVTTSAQASPISHYGDYLFVSDGLGRFKIF
Ga0306925_107124282	3300031890	Soil	MRTLFVVAVLVVIGIDGWLCLKTMTPGALARSSTFNPLLATTSAQASPISHHSDYLFVADRAGPL
Ga0306923_102276624	3300031910	Soil	VFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV
Ga0306923_103609272	3300031910	Soil	MRTLLVAAVGVLVVIGIDGWLCLRTLTPGPLVRSPTFNPLIVTTSAQASPISHYGPL
Ga0306921_100892021	3300031912	Soil	MRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQAS
Ga0306921_102377203	3300031912	Soil	MRFVAAVAVLVVISIDAWLCLRTLTPGALTRSPTFNPLIATAGAQVSPISHYGDYLFVADRAGPV
Ga0306921_106794873	3300031912	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGPLVRSPTFNPLIVTTSAQASPISHYGDYLFVSDRAGPV
Ga0306921_109966892	3300031912	Soil	MRTLFVAVVAVLVVIGIDGWLCLKTMTPGALARSSTFNPLLATTSAQASPISHHSDYLFVADRAGPL
Ga0310912_100164013	3300031941	Soil	MRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV
Ga0310912_101319161	3300031941	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLSATTS
Ga0310912_105305391	3300031941	Soil	GGAMRFVAAVAVLVVISIDAWLCLRTLTPGALARSPTFNPLIATAGAQVSPISHYGDYLFVADRAGPV
Ga0310916_108792322	3300031942	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYL
Ga0310913_100843991	3300031945	Soil	MRTLFVAAVALLVVIGIDGWLCLRTLTLGVLVRSPTFNPLIVTTSAQASPISHYGPL
Ga0310913_103689511	3300031945	Soil	FVAAVAVLVVISIDGWLCLRTLTPGALARSPTFNPLIATAGAQVSPISHYGDYLFVADRAGPV
Ga0310910_105408832	3300031946	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSAQASRISHYGDYLFVADRAGPV
Ga0310910_109069581	3300031946	Soil	VAVLVVIGIDGWLCFRTLTPGALARSSTFNPLIATTTSAQASPISHYGDYLFVADRAGAL
Ga0310910_114832601	3300031946	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSAFNPLIATTSAQASP
Ga0306926_102451671	3300031954	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTS
Ga0306926_126974131	3300031954	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSAFNPLIATTSAQASPISHYGDYLFVADRAGPV
Ga0306922_109620803	3300032001	Soil	MRTLFVAAVAVLVVIGIDGWLCFRTLTPGALARSSTFNPLIATTTSAQASPISHYGDYL
Ga0306922_110807651	3300032001	Soil	GGAMRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSAFNPLIATTSAQASPISHYGDYLFVADRAGPV
Ga0318507_103745852	3300032025	Soil	MRTLFVASVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVAER
Ga0318558_100378712	3300032044	Soil	MLTLFVAAVAVLVVISIDGWLCLRTLTPGALARSPTFNPLIATTSAQVSPISHYGDYLFLADRAGPV
Ga0318506_100121281	3300032052	Soil	MRTLFVAAVAVLVVISIDGWLCLRTLTPGALARSPTFNPLIATTSAQVSPIS
Ga0318506_105553582	3300032052	Soil	VAAVALLVVISIDGWLCLRTLTPGALARSPTFNPLIATTSAQVSPISHYGDYLFLADRAGPV
Ga0318505_102704201	3300032060	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSAQASRISHYGDYL
Ga0318524_103810932	3300032067	Soil	VAVLVVISIDGWLCLRTLTPGALARSPTFNPLIATTSAQVSPISHYGDYLFLADRAGPV
Ga0306924_110333042	3300032076	Soil	MRTLLVAAVGMLVVIGIDGWLCLRTLTPGPLVMSPTFNPLIVTTSAQASPISHYGPL
Ga0306924_115280601	3300032076	Soil	VRTLFVAVVAVLVVIGIDGWLCLKTMTPGALVRSSTFNSLLATTSAQASPISHHGDYLFVAD
Ga0306924_117001552	3300032076	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSAQAS
Ga0318518_106269521	3300032090	Soil	VLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV
Ga0318577_106395751	3300032091	Soil	CRGGAMRTLLVAAVGVLVVIGIDGWLCLRTLTPGPLVRSPTFNPLIVTTSAQASPISHYGDYLFVSDRAGRL
Ga0306920_1000153831	3300032261	Soil	VGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPISQYGDYLFVAERAGPV
Ga0306920_1003995853	3300032261	Soil	VGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASPNSQYGDYLFVADRAGPV
Ga0306920_1008159383	3300032261	Soil	MRTLFVAAVGVFVLIGVDAWLCIRTMTPGALARSSIFNPLIATTSAQASP
Ga0306920_1014071082	3300032261	Soil	MRTLLVAAVGVLVVIGIDGWLCLRTLTPGPLVRSPTFNPSIVTTSAQASPISHYGPL
Ga0310914_105931761	3300033289	Soil	MRTLFVAAVAVLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSAQASLISHYGDYLFVADRAGPV
Ga0318519_102838591	3300033290	Soil	FECRGGAMRTLFVAAVAVLVVIGIDGWLCFRTLTPGALARSSTFNPLIATTTSAQASPISHYGDYLFVADRAGAL
Ga0318519_110533151	3300033290	Soil	VLVVIGIDGWLCLRTLTPGALARSSTFNPLIATTSAQASRISHYGDYLFVADRAGPV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056814

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences