Metagenome / Metatranscriptome Family F056811

Basic Information
Family ID	F056811
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	47 residues
Representative Sequence	SLYHHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Number of Associated Samples	128
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	2.19 %
% of genes from short scaffolds (< 2000 bps)	1.46 %
Associated GOLD sequencing projects	124
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Unclassified (97.810 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.788 % of family members)
Environment Ontology (ENVO)	Unclassified (24.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.095 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 11.11% Coil/Unstructured: 88.89%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF12694	cpYpsA	6.57
PF00440	TetR_N	3.65
PF03401	TctC	1.46
PF00805	Pentapeptide	1.46
PF13531	SBP_bac_11	1.46
PF11220	DUF3015	1.46
PF06262	Zincin_1	1.46
PF00926	DHBP_synthase	0.73
PF16124	RecQ_Zn_bind	0.73
PF05977	MFS_3	0.73
PF00903	Glyoxalase	0.73
PF03640	Lipoprotein_15	0.73
PF13181	TPR_8	0.73
PF07690	MFS_1	0.73
PF16868	NMT1_3	0.73
PF00486	Trans_reg_C	0.73
PF08241	Methyltransf_11	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.46
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.46
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	1.46
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	0.73
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.73
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.73

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.81 %
All Organisms	root	All Organisms	2.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.81 %
cellular organisms	root	All Organisms → cellular organisms	2.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Scaffold	Taxonomy	Length	IMG/M Link
3300012469\|Ga0150984_119011317	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300017970\|Ga0187783_10059964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2806	Open in IMG/M
3300031573\|Ga0310915_10207039	All Organisms → cellular organisms → Bacteria → Acidobacteria	1373	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.24%
Host-Associated	Host-Associated	8.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.94%
Plants	Host-Associated → Plants	8.03%
Aquatic	Environmental → Aquatic	7.30%
Arthropoda	Host-Associated → Arthropoda	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.57%
Sediment	Environmental → Aquatic → Sediment	5.11%
Freshwater	Environmental → Aquatic → Freshwater	2.19%
Peat	Environmental → Terrestrial → Peat	1.46%
Roots	Host-Associated → Plants → Roots	1.46%
Floodplain	Environmental → Terrestrial → Floodplain	0.73%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.53%
Loam	Environmental → Terrestrial → Soil → Loam	5.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.46%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.73%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.73%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.73%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.73%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.19%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.19%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.73%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.73%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012134	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT142_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_101732411	3300002914	Grasslands Soil	RSSLYHHKGRLYIADAIVLPARGDNDMTTPSRYDQTIRFPPDGRFD*
Ga0062593_1007403472	3300004114	Soil	DREKGGERVRTSIYYNKGRLYLAQAIVLPARGDKDMTVPSRFDQTVRFPPDGRFD*
Ga0066395_109132021	3300004633	Tropical Forest Soil	SLYHHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0066678_109509792	3300005181	Soil	FFSKGRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR*
Ga0066675_113123991	3300005187	Soil	GSRMRSSLFFSKGKLYRADAVVLPARGDKDMTVPSRFDQTIRFPPDGRFPDRVR*
Ga0066686_110265142	3300005446	Soil	SLYYHKGRLYVADAVVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0066681_109378871	3300005451	Soil	SVFYHKGRLYIVDATVLPSRSDKDMTTPSRYDQTIRFPPDGRFD*
Ga0066697_105254441	3300005540	Soil	KGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0070733_110696071	3300005541	Surface Soil	SLYYNKGRLYIAEAVVLPARGDKDMTTPTRFDQTIRFPPDGRFD*
Ga0070732_105744591	3300005542	Surface Soil	KGRLYIADAIVTPARGDKDMTTPSRFDQTIRFPPDGRFD*
Ga0070686_1011366312	3300005544	Switchgrass Rhizosphere	VDKMNGQRVRSSIYYHKGRLYLADATVLPARGDKDMTTPSRFDQTVRFPPDGRFD*
Ga0070665_1006297803	3300005548	Switchgrass Rhizosphere	TSIYYHKGRLYLADATVLPARGDKDMTTPSRFDQTVRFPPDGRFD*
Ga0066695_105648581	3300005553	Soil	RVRSSLYHHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0066707_107706472	3300005556	Soil	VRSSLYYHKGRLYVADAVVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0066670_100974294	3300005560	Soil	GSRVRASLYHHKGRLYIAEAVVLPARGDKDMMTPSRYDQTIRFPPDGRFD*
Ga0066694_104176071	3300005574	Soil	GRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR*
Ga0066903_1090928791	3300005764	Tropical Forest Soil	VVDRTDGSRVRTSLYHHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0075014_1007485762	3300006174	Watersheds	LYIAEAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0075422_104440341	3300006196	Populus Rhizosphere	VVDRMDGSRIRTSLYYSKGRLYRADAIVLPARGDKDMTTPSRFDQTIRFPPDGRFDDTKK
Ga0075021_100943391	3300006354	Watersheds	LVVDRKDGSRVRSSLYYHKGRLYIAEAVVLAARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0074060_117640381	3300006604	Soil	RLYIADAIVLPARGDKDMATPSRYDQTIRFPPDGRFD*
Ga0066653_102715943	3300006791	Soil	ADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR*
Ga0079220_107492902	3300006806	Agricultural Soil	YIAEAAVLPARGDKDMTTPTRFDQTIRFPPDGRFD*
Ga0099793_105746671	3300007258	Vadose Zone Soil	YIADAIVLPARDDKDMTTPSRYDQTIRFPPDGRFD*
Ga0099829_110574712	3300009038	Vadose Zone Soil	ALVVDRMDGSRVRSSLYYHKGRLYITGAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0099827_107052933	3300009090	Vadose Zone Soil	LYIADAIVLPARGDKDMATPSRYDQTIRFPPDGRFD*
Ga0066709_1035229082	3300009137	Grasslands Soil	VVDRSDGSRARTSLYYHRGRLYLADAILLPARGDKDMSVPSRYDQTIRFPPDGRFD*
Ga0111538_104975913	3300009156	Populus Rhizosphere	VDKMNGQSVRTSIYYHKGRLYLADATVLPARGDKDMTTPSRFDQTVRFPPDGRFD*
Ga0105347_15119011	3300009609	Soil	SIYYSKGRLYRADAIVLPARGDKDMTTPSRFDQTIRFPPDGRFPDAKQ*
Ga0116216_106180641	3300009698	Peatlands Soil	RVRSSLYYNKGRLYIADAVVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0126380_101430612	3300010043	Tropical Forest Soil	VDRADGSRVRSSLYHRNGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0123356_133177051	3300010049	Termite Gut	DGTRVRSSLYYHRGRLYIADAIVLPLRGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0127486_10904071	3300010128	Grasslands Soil	LFFSKGRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR*
Ga0127499_10248691	3300010141	Grasslands Soil	LFFSKGRIYRADAIVLPARGDKDMTVPSRFDQTIRFQPDGRFPDKPR*
Ga0126376_101722203	3300010359	Tropical Forest Soil	DRTDGSRVRTSLYHHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0126376_107904091	3300010359	Tropical Forest Soil	RVRTSLYHHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0126372_120098972	3300010360	Tropical Forest Soil	HHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0126377_115922122	3300010362	Tropical Forest Soil	RVRSSLYYHKGRLYIADAVVLPARGDKDMATPSRYDQTIRFPPDGRFD*
Ga0126379_137285801	3300010366	Tropical Forest Soil	LYVADAIVLPARGDRDMTTPSRYDQTIRFPPDGRFD*
Ga0136449_1008919531	3300010379	Peatlands Soil	RVRTSLFYTKGRLYMADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0126350_107602022	3300010880	Boreal Forest Soil	VDRQDGSRVRSSLYYNKGRLYIADAVVLPARGDKDMTTPSRYDQTIRFPPDGRFN*
Ga0150983_130093372	3300011120	Forest Soil	SLYYNKGRLYIAEAAVLPARGDKDMTTPTRFDQTIRFPPDGRFDEAF*
Ga0150983_162605212	3300011120	Forest Soil	MADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0137391_100241761	3300011270	Vadose Zone Soil	GSRVRSSLYHHKGRLYMADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0137424_10632963	3300011412	Soil	YVSKGRLYIADAIVQPARGDKDMTVPSRFDQTIRFPPDGRFD*
Ga0137330_10570521	3300012134	Soil	MDGSRIRTSLYYSKGRLYRADAIVLPARGDKDMTTPSRFDQTIRFPPDGRFPDTKQ*
Ga0137327_11229821	3300012173	Soil	LVVDRMDGSRIRTSLYYSKGRLYRADAIVLPARGDKDMTTPSRFDQTIRFPPDGRFD*
Ga0137388_110776822	3300012189	Vadose Zone Soil	RVRTSLYYNKGRLYLADAIVLPARGDKDMTVPSRFDQTVRFPPDGRFD*
Ga0137383_109190852	3300012199	Vadose Zone Soil	YYNKGRLYLAQAIVLPARGDKDMTVPSRFDQTVRFPPDGRFDK*
Ga0137382_110798212	3300012200	Vadose Zone Soil	DRPDGSRLRSSLFFSKGRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR*
Ga0137363_106220013	3300012202	Vadose Zone Soil	YIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0137363_109021241	3300012202	Vadose Zone Soil	GRLYITGAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0137399_111709862	3300012203	Vadose Zone Soil	RTDGSRVRSSLYHHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0137381_110750871	3300012207	Vadose Zone Soil	VDRVDGSRVRTSLYSHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0137376_104349252	3300012208	Vadose Zone Soil	SLYYHKGRLYLADAIVTPARGDKDMTTPSRFDQTIRFPPDGRFD*
Ga0137376_108707042	3300012208	Vadose Zone Soil	VDRPDGSRLRSSLFFSKGRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR*
Ga0137376_112356212	3300012208	Vadose Zone Soil	LAQAIVLPARGDKDMTVPSRFDQTVRFPPDGRFDK*
Ga0137378_103175091	3300012210	Vadose Zone Soil	SRVRSSLYYHKGRLYITDAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0137371_105964833	3300012356	Vadose Zone Soil	IVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR*
Ga0137360_116105721	3300012361	Vadose Zone Soil	KAPGGLYIAEAMVLAARRDKDMTTPSRYDQTVRFPPGGRFD*
Ga0137390_107855571	3300012363	Vadose Zone Soil	YNKGRLYLADAIVLPARGDKDMTVPSRFDQTVRFPPDGRFD*
Ga0134054_11434922	3300012390	Grasslands Soil	RMRSSLFFSKGRLYRADAIILPTRGDKDMTVPSRFDQTIRFPPDGRFPDRVR*
Ga0134055_11940151	3300012401	Grasslands Soil	RIRSSLFFSRGRLYRADAIVLAARGDKDMTVPSRFDQTIRFPPDGRFPDRVR*
Ga0150984_1136169392	3300012469	Avena Fatua Rhizosphere	VVDREDGSRARTSLYYHKGKLYMADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0150984_1190113171	3300012469	Avena Fatua Rhizosphere	GHLYIAEAIVLPERGDKDMIVPSRFDQTVRFPPDGRFD*
Ga0137394_114178032	3300012922	Vadose Zone Soil	TSLYYNKGRLYLADAIVLPARGDKDMTTPSRFDQTIRFPPDGRFDK*
Ga0137404_120320001	3300012929	Vadose Zone Soil	RTSVFYHKGRLYVVEAIVLPSRSDKDMTTPSRYDQTIRFPPDGRFD*
Ga0137407_116345991	3300012930	Vadose Zone Soil	GRLYIAEAYVTPARGDKDMTTPSRFDQTIRFPPDGRFD*
Ga0137410_109238232	3300012944	Vadose Zone Soil	SSLYHHKGRLYITDAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0164298_110687121	3300012955	Soil	GVTLVVDRENGQRVRTSIYYHKGHLYLADAIVLPARGDKDMTVPSRFDQTVRFPPDGRVD
Ga0126369_125098661	3300012971	Tropical Forest Soil	SSLYHRNGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0134077_101897391	3300012972	Grasslands Soil	RIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR*
Ga0181532_101637753	3300014164	Bog	LVVDRMDGSRVRTSLYYNKGRLYIADAVVLAARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0163163_121663822	3300014325	Switchgrass Rhizosphere	RTSLFFHRSKLYIVDTILLPTRADKDMSIPSRYDQTIRFPPDGRFD*
Ga0157379_118222901	3300014968	Switchgrass Rhizosphere	GSRARTSLYYHKGKLYMADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD*
Ga0167644_10481591	3300015206	Glacier Forefield Soil	SRVRSSLYYHKGRLYIAEAIVLPARGDKDMTTPSRYDMTIRFPPDGHFD*
Ga0180089_11113731	3300015254	Soil	RMDGSRIRTSVFFSKGRLYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFD*
Ga0132256_1037640011	3300015372	Arabidopsis Rhizosphere	QRVRTSIYYHKGHLYLADAIVLPARGDKDMTVPSRFDQTVRFPPDGRFD*
Ga0182033_118470581	3300016319	Soil	GTLDGNRNDGSRVRSSLYHHRGRLYIAEAIVLPARADKDMTTPSRYDQTIRFPPDGRFD
Ga0182032_101820451	3300016357	Soil	NKGRLYIAEAIVLPERGDKDMTTPSRYDQTIRFPPDGRFD
Ga0181515_12940822	3300016730	Peatland	VTLVVDHRDGSRVRSSLYYHKNRLYIAEADVLPARGDKDMTTPSRYDMTIRFPPDGHFD
Ga0134112_101605531	3300017656	Grasslands Soil	GRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR
Ga0187819_106519462	3300017943	Freshwater Sediment	RTSLYYNKGRLYMADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0187783_100599647	3300017970	Tropical Peatland	SLYHHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0187783_110645521	3300017970	Tropical Peatland	RLYIADAIVLPARGSKDMATPSRYDMTIRFPPDGRFD
Ga0187781_108632361	3300017972	Tropical Peatland	SRARSSLYYRKGRLYIADAIVLAARGSKDMATPSRYDMTIRFPPDGRFD
Ga0187781_110594092	3300017972	Tropical Peatland	GRLYIADAMVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0187782_105934343	3300017975	Tropical Peatland	ELDVIDRPDGSRVRDSLFYHRGRLYIAEAMVLPARGDKDMATPSRFDMTIRFPPDGRFD
Ga0066667_106989341	3300018433	Grasslands Soil	ISSLLFFSKGRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR
Ga0066669_124526172	3300018482	Grasslands Soil	YSNKGRLYIADAIVLPARGDKDMATPSRYDQTIRFPPDGRFD
Ga0190264_100635351	3300019377	Soil	RADAIVLPARGDKDMTTPSRFDQTIRFPPDGRFPDTKQ
Ga0193728_13053292	3300019890	Soil	YIAEAVVLPARGDKDMITPSRFDQTIRFPPDGHFD
Ga0210405_107512271	3300021171	Soil	GSRARSSLYYHKGRLYIADAIVLPARGDKDMTTPSRYDMTIRFPPDGRFD
Ga0213875_103465031	3300021388	Plant Roots	SLFYTKGRLYMADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0210394_116862641	3300021420	Soil	VRTSLYYHKGRLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0210392_115128242	3300021475	Soil	YIADATVLPARGDKDMATPSRYDQTIRFPPDGRFD
Ga0242655_102504151	3300022532	Soil	RTSLYYNKGRLYLADAVVTPARGDKDMTTPSRFDQTIRFPPDGRFD
Ga0242662_101496412	3300022533	Soil	YYNKGRLYIAQAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0242657_12212841	3300022722	Soil	KDGSRVRSSLYYHKGRLYIAEAVVLPARGDKDMTTPSRYDMTIRFPPDGHFD
Ga0207664_109206401	3300025929	Agricultural Soil	VRSSLYYHKGRLYIAQAIVLPARGDKDMTTPSRYDMTIRFPPDGHFD
Ga0209472_12364341	3300026323	Soil	DGSRMRSSLFFSKGRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR
Ga0209152_102891971	3300026325	Soil	RSSLFFSKDKLYRADAVVLPARGDKDMTVPSRFDQTIRFPPDGRFPDRVR
Ga0209266_10143906	3300026327	Soil	YRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR
Ga0209802_10100706	3300026328	Soil	RIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR
Ga0209267_12144292	3300026331	Soil	LFFSKGRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR
Ga0209377_12545512	3300026334	Soil	TMVVARPDGSRMRSSLFFSKGRIYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR
Ga0257157_10751762	3300026496	Soil	TDGSRVRSSLYYHKGRLYIADAVVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0208981_11846612	3300027669	Forest Soil	SLYYHKGRLYLADAIVLPARGDKDMTVPSRFDQTVRFPPDGRFD
Ga0209701_102758153	3300027862	Vadose Zone Soil	LFFSKGRLYRADAIVLPARGDKDMTVPSRFDQTIRFPPDGRFPDKPR
Ga0209526_103867521	3300028047	Forest Soil	HHKGRLYIADAIVLPARGDKDMTTPSRCDQTIRFPPDGRFD
Ga0222749_101256223	3300029636	Soil	DRLDGTRVRTSLYYNKGRLYLADAVVTPARGDKDMTTPSRFDQTIRFPPDGRFD
Ga0311356_119375821	3300030617	Palsa	LYIADAIVLAARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0265316_108152551	3300031344	Rhizosphere	RVRTSIYYHKGRMYIADATVLPARGDKDMTVPSRFDQTVRFPPDGRFD
Ga0170818_1044908172	3300031474	Forest Soil	VTLVVDKANGQRVRTSLYYHKERLYLADAIVLPARGDKDMTIPSRFDQTVRFPPDGRFD
Ga0310915_102070391	3300031573	Soil	KGRLYIAEAIVLPERGDKDMTTPSRYDQTIRFPPDGRFD
Ga0318561_101054853	3300031679	Soil	RALSSLYDHKGRLYIAEAIVLAAHGDKDMTMASRYAQTIRFPPDSFD
Ga0265314_101932133	3300031711	Rhizosphere	MYIADATVLPARGDKDMTVPSRFDQTVRFPPDGRFD
Ga0307476_100491514	3300031715	Hardwood Forest Soil	DGTRVRSSLYYHRGRLYIADAIVLSARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0306918_113338652	3300031744	Soil	KGRLYIADAIVTPARGDKDMTTPSRFDQTIRFPPDGRFD
Ga0318546_105425141	3300031771	Soil	YHKGRLYIPEADVLPARGDKDMTTPSRFVQTIRFPPDSFD
Ga0307473_112059411	3300031820	Hardwood Forest Soil	VRTSLYYHKGRLYVADTIVLPARGDLDMSVPSRYDQTIRFPPDGRFD
Ga0318551_106819911	3300031896	Soil	GRLYIAEAIVLPARADKDMTTPSRYDQTIRFPPDGRFD
Ga0318520_110407851	3300031897	Soil	LYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0306923_100662076	3300031910	Soil	VDRKDGSRALSSLYDHKGRLYIAEAIVLPAHGDKDMTMASRYAQTIRFPPDSFD
Ga0310912_107789303	3300031941	Soil	LYYNMGRLYIADATVLPARGDKDMATPSRYDQTIRFPPDGRFD
Ga0310912_108544881	3300031941	Soil	NDGSRLRSSLYHHRGRLYIAEAIVLPARADKDMTTPSRYDQTIRFPPDGRFD
Ga0310913_102112521	3300031945	Soil	KGKLYIAEAVVLPTRGNKDMTIPGRYDQTIRFPPDGRFD
Ga0310909_110297142	3300031947	Soil	TLVVDRNDGSRLRSSLYHHRGRLYIAEAIVLPARADKDMTTPSRYDQTIRFPPDGRFD
Ga0306926_112098491	3300031954	Soil	RLYIADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0306922_112403531	3300032001	Soil	KGKLYIAEAVVLPARGNKDMTIPGRYDQTIRFPPDGRFD
Ga0308173_119150111	3300032074	Soil	YYNKGRLYIAEAIVLPERGDKDMIVPSRFDQTVRFPPDGRFD
Ga0306924_116963771	3300032076	Soil	RVRSSLYHHRGRLYIAEAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0318540_103930951	3300032094	Soil	RVRSSLYHHRGRLYIAEAIVLPARADKDMTTPSRYDQTIRFPPDGRFD
Ga0311301_106703261	3300032160	Peatlands Soil	DRRDGSRVRTSLFYTKGRLYMADAIVLPARGDKDMTTPSRYDQTIRFPPDGRFD
Ga0316628_1031835992	3300033513	Soil	TLVVDRPDGNRVRTSVYYHKGRLYLADAVVTPARGDKDMTTPSRFDQTVRFPPDGRFD
Ga0326723_0404529_2_160	3300034090	Peat Soil	ENGQRVRTSIYYHKGHLYLADAIVLPARGDKDMTTPSRFDQTVRFPPDGRFD
Ga0364925_0420425_8_178	3300034147	Sediment	MDGSRIRTSIYYSKGRLYRADAIVLPARGDKDMTTPSRFDQTIRFPPDGRFPDAKQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056811

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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