Metagenome / Metatranscriptome Family F056779

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056779
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	69 residues
Representative Sequence	MTIGDAGDHDGADQQRLARDLIEVHGNEAPTIARGNARTAALAGQPIVAKSWIRVLSIIQRQQAGEARKI
Number of Associated Samples	106
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.47 %
% of genes near scaffold ends (potentially truncated)	16.06 %
% of genes from short scaffolds (< 2000 bps)	91.24 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.672 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.168 % of family members)
Environment Ontology (ENVO)	Unclassified (31.387 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.555 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.22% β-sheet: 0.00% Coil/Unstructured: 38.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domain	d1fpoa2	1fpo	0.74181
a.205.1.1: Hsp90 co-chaperone CDC37	d1us7b_	1us7	0.7362
a.25.1.4: YciF-like	d2gyqa1	2gyq	0.7285
a.124.1.1: Phospholipase C	d1ca1a1	1ca1	0.72763
a.25.1.0: automated matches	d2c41a_	2c41	0.72738

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF06831	H2TH	8.76
PF00378	ECH_1	4.38
PF01649	Ribosomal_S20p	1.46
PF00118	Cpn60_TCP1	0.73
PF14226	DIOX_N	0.73
PF01209	Ubie_methyltran	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	8.76
COG0268	Ribosomal protein S20	Translation, ribosomal structure and biogenesis [J]	1.46
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.73
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.67 %
Unclassified	root	N/A	15.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.67 %
Unclassified	root	N/A	15.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.67 %
Unclassified	root	N/A	15.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.94 %
Unclassified	root	N/A	15.33 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	66.42 %
Unclassified	root	N/A	15.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.33 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.03 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.03 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	2.19 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.03 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2.19 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0849914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300001661\|JGI12053J15887_10425363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300002245\|JGIcombinedJ26739_100371921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1309	Open in IMG/M
3300002245\|JGIcombinedJ26739_100719574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	877	Open in IMG/M
3300002245\|JGIcombinedJ26739_101319896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300004081\|Ga0063454_101895647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300005167\|Ga0066672_10183684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1327	Open in IMG/M
3300005171\|Ga0066677_10504238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300005175\|Ga0066673_10775979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300005176\|Ga0066679_10184322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1324	Open in IMG/M
3300005177\|Ga0066690_10500984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	817	Open in IMG/M
3300005177\|Ga0066690_10792849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300005177\|Ga0066690_11036061	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300005178\|Ga0066688_10385013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300005179\|Ga0066684_11027035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300005184\|Ga0066671_10175580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270	Open in IMG/M
3300005436\|Ga0070713_101546630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300005440\|Ga0070705_100598659	Not Available	852	Open in IMG/M
3300005445\|Ga0070708_100416797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1266	Open in IMG/M
3300005445\|Ga0070708_102022920	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300005471\|Ga0070698_100683829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300005518\|Ga0070699_100080671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2835	Open in IMG/M
3300005540\|Ga0066697_10269181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300005560\|Ga0066670_10300424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	977	Open in IMG/M
3300005561\|Ga0066699_10370920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1024	Open in IMG/M
3300005566\|Ga0066693_10187564	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300005575\|Ga0066702_10120997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1519	Open in IMG/M
3300005575\|Ga0066702_10658608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	625	Open in IMG/M
3300005575\|Ga0066702_10696430	Not Available	606	Open in IMG/M
3300005586\|Ga0066691_10752039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300005598\|Ga0066706_11101665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300006028\|Ga0070717_10409558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1219	Open in IMG/M
3300006028\|Ga0070717_11229037	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300006031\|Ga0066651_10540209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300006031\|Ga0066651_10603830	Not Available	584	Open in IMG/M
3300006046\|Ga0066652_100567315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1065	Open in IMG/M
3300006046\|Ga0066652_101930087	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300006176\|Ga0070765_100034660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3973	Open in IMG/M
3300006176\|Ga0070765_100209773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1771	Open in IMG/M
3300006796\|Ga0066665_10382957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1156	Open in IMG/M
3300006800\|Ga0066660_10192486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1548	Open in IMG/M
3300006854\|Ga0075425_102443692	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300006953\|Ga0074063_12649008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300007788\|Ga0099795_10011880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2621	Open in IMG/M
3300009012\|Ga0066710_101460220	Not Available	1057	Open in IMG/M
3300009012\|Ga0066710_101816545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300009012\|Ga0066710_101900407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	891	Open in IMG/M
3300009038\|Ga0099829_10948458	Not Available	714	Open in IMG/M
3300009137\|Ga0066709_100020027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	6680	Open in IMG/M
3300009137\|Ga0066709_100171033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2813	Open in IMG/M
3300009143\|Ga0099792_10360168	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300010159\|Ga0099796_10476405	Not Available	558	Open in IMG/M
3300011120\|Ga0150983_11060563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1350	Open in IMG/M
3300011120\|Ga0150983_12530905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1727	Open in IMG/M
3300011269\|Ga0137392_10265580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1414	Open in IMG/M
3300011270\|Ga0137391_10089707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2658	Open in IMG/M
3300012198\|Ga0137364_10563302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300012199\|Ga0137383_10874423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300012200\|Ga0137382_10506028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300012202\|Ga0137363_11598472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300012203\|Ga0137399_10090977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2340	Open in IMG/M
3300012203\|Ga0137399_10286353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1358	Open in IMG/M
3300012204\|Ga0137374_10408343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1077	Open in IMG/M
3300012205\|Ga0137362_10691875	Not Available	876	Open in IMG/M
3300012211\|Ga0137377_10499510	All Organisms → cellular organisms → Bacteria → Proteobacteria	1155	Open in IMG/M
3300012285\|Ga0137370_10120302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1496	Open in IMG/M
3300012285\|Ga0137370_10798164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300012361\|Ga0137360_10437671	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300012362\|Ga0137361_11014679	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300012364\|Ga0134027_1014242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1099	Open in IMG/M
3300012372\|Ga0134037_1179320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1193	Open in IMG/M
3300012469\|Ga0150984_113461124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300012582\|Ga0137358_10194432	All Organisms → cellular organisms → Bacteria → Proteobacteria	1384	Open in IMG/M
3300012582\|Ga0137358_10858472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300012923\|Ga0137359_10598934	Not Available	967	Open in IMG/M
3300012927\|Ga0137416_10894447	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300014157\|Ga0134078_10517481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300014166\|Ga0134079_10455600	Not Available	607	Open in IMG/M
3300015242\|Ga0137412_10549219	Not Available	879	Open in IMG/M
3300015357\|Ga0134072_10342258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300015374\|Ga0132255_104164335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300018431\|Ga0066655_11228982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300018433\|Ga0066667_11417706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300018433\|Ga0066667_12289679	Not Available	505	Open in IMG/M
3300018468\|Ga0066662_10613742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1020	Open in IMG/M
3300018482\|Ga0066669_11291469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300020199\|Ga0179592_10233580	All Organisms → cellular organisms → Bacteria → Proteobacteria	829	Open in IMG/M
3300020583\|Ga0210401_10083999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2995	Open in IMG/M
3300021168\|Ga0210406_10605154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300021170\|Ga0210400_10002679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	16269	Open in IMG/M
3300021478\|Ga0210402_10810601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300021478\|Ga0210402_11119681	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300021559\|Ga0210409_11056303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300022525\|Ga0242656_1056435	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300022712\|Ga0242653_1009950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1165	Open in IMG/M
3300025928\|Ga0207700_11042948	Not Available	731	Open in IMG/M
3300026325\|Ga0209152_10188607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300026335\|Ga0209804_1281282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300026527\|Ga0209059_1162516	Not Available	801	Open in IMG/M
3300026551\|Ga0209648_10200700	All Organisms → cellular organisms → Bacteria → Proteobacteria	1523	Open in IMG/M
3300027605\|Ga0209329_1099249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300027616\|Ga0209106_1014084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1703	Open in IMG/M
3300027669\|Ga0208981_1007701	All Organisms → cellular organisms → Bacteria	2710	Open in IMG/M
3300027738\|Ga0208989_10099067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M
3300027903\|Ga0209488_10159662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1703	Open in IMG/M
3300028047\|Ga0209526_10250966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1210	Open in IMG/M
3300028047\|Ga0209526_10468513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300028536\|Ga0137415_10110188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2601	Open in IMG/M
3300028536\|Ga0137415_11382591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300028906\|Ga0308309_10208552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1614	Open in IMG/M
3300028906\|Ga0308309_11252604	Not Available	638	Open in IMG/M
3300029636\|Ga0222749_10748827	Not Available	535	Open in IMG/M
3300030829\|Ga0308203_1043597	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300030990\|Ga0308178_1009100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1349	Open in IMG/M
3300030991\|Ga0073994_12294936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300030997\|Ga0073997_10010923	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300030997\|Ga0073997_10017053	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300030997\|Ga0073997_10017186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300030997\|Ga0073997_10020700	Not Available	754	Open in IMG/M
3300030998\|Ga0073996_10133372	Not Available	946	Open in IMG/M
3300031022\|Ga0138301_1774378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1248	Open in IMG/M
3300031023\|Ga0073998_10032845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1275	Open in IMG/M
3300031047\|Ga0073995_10004420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1079	Open in IMG/M
3300031047\|Ga0073995_11886226	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300031047\|Ga0073995_12096550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300031057\|Ga0170834_108706644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300031231\|Ga0170824_103785643	Not Available	780	Open in IMG/M
3300031231\|Ga0170824_123815240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300031421\|Ga0308194_10399558	Not Available	501	Open in IMG/M
3300031720\|Ga0307469_10702434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	917	Open in IMG/M
3300031962\|Ga0307479_11122917	All Organisms → cellular organisms → Bacteria → Proteobacteria	752	Open in IMG/M
3300032180\|Ga0307471_100564542	Not Available	1294	Open in IMG/M
3300032180\|Ga0307471_102083233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300034644\|Ga0370548_009236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1311	Open in IMG/M
3300034681\|Ga0370546_009066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1142	Open in IMG/M
3300034681\|Ga0370546_036827	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.81%
Host-Associated	Host-Associated	2.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.81%
Plants	Host-Associated → Plants	2.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.37%
Loam	Environmental → Terrestrial → Soil → Loam	20.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08499142	2228664022	Soil	VTVGDAANYDEADQQRLARDLIEVHGNDAPTIARSNASAAALAGQPNVAKSWIRVLSIIQLQQAGQPGKA
JGI12053J15887_104253632	3300001661	Forest Soil	MTIGDTVDXDGADQQRLARDLIEVHGXEAPAVARGNARTAALAGRPIVAKSWIRVLSIIQRQQAGQPGEV*
JGIcombinedJ26739_1003719213	3300002245	Forest Soil	MMLDDAGNDDGADQQRLAQDLIAVHGNEAPMVARGNARTAALAGQPALAKSWIRVLTIIQRQQAGSSKNI*
JGIcombinedJ26739_1007195742	3300002245	Forest Soil	MTIGGSGDDDGADKLACDLIEVHGNDAPTIARGNARTAALAGQPMLAKSWIRVLSMIQRQQAGAAKDI*
JGIcombinedJ26739_1013198962	3300002245	Forest Soil	MLDGGGDNDGADQQRLARDLIEVHGDEAPTVARGNARTAALAGQRALAKSWIRVLSIIQRYQAG*
Ga0063454_1018956471	3300004081	Soil	MTIGDAGDHDGADQQRLARDLIEVHGDEAPAVARGNARIAALAGQPIVAKSWIRVLSMIQRQQAGEARKI*
Ga0066672_101836843	3300005167	Soil	MVAGAGDDGAADKLARDLIEVHGDEAPTIARGNARTAALAGQPALAKSWIRVLSIIQRQQAGRATDI*
Ga0066677_105042381	3300005171	Soil	MMVGGAGDDGGADKLALDLIEVHGDEAPTIARGNARAAALAGQPMAAKSWIRVLSIIQRQQAGQSAKG*
Ga0066673_107759791	3300005175	Soil	MTIGDTVDRDGADQQRLARDLIEVHGNGAPAVARDNARTAALAGRPIVAKSWIRVLSIIQRQQAGQPGKV*
Ga0066679_101843224	3300005176	Soil	MVGGAGDDGAADKLARDLIEVHGDEAPTIARGNARTAALAGQPALAKSWIRVLSIIQRQQAGRATDI*
Ga0066690_105009842	3300005177	Soil	MTVGDAGDDGGADKLARDLIEVHGGEAPTSARGNARTAALAGQPALAKSWIRVLSIIQRQQAGRATDI*
Ga0066690_107928491	3300005177	Soil	MTIGDAGDGHGVEKLARDLIEVHGDEAPTIARGNARTAALAGQPALAKSWIRVLSIIQRQQADRSKDI*
Ga0066690_110360612	3300005177	Soil	MTIGDAGDDDGADKLARDLIEVHGDEAPMVARGNARTAALAGQPALAKSWIRVLSIIQRQQAG
Ga0066688_103850132	3300005178	Soil	MTIGDAGDHDGADQQRLARDLIEVHGNEAPTIARGNARAAALAGQPIVAKSWIRVLSIIQRQQAAQPGKV*
Ga0066684_110270351	3300005179	Soil	TMTIGDAGDHDGADQQRLARDLIEVHGHEAPAVARGNARTAALAGRPIVAKSWIRVLSIIQRQQAGQPGKV*
Ga0066671_101755801	3300005184	Soil	MMVGGAGDDGGADRLALDLIEVHGDEAPTIARGNARAAALAGQPMAAKSWIRVLSIIQRQQAGQSAKV*
Ga0070713_1015466303	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PMMLDGGGDNDGADQQRLARDLIEVHGDEAPTVARGNARTAALAGQPALAKSWIRVLSIIQRHQAGQSRNI*
Ga0070705_1005986591	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTIGDTAGHDGAEQQRLAHDLIEVHGNEAPVVARGNARAAALAGQPIVAKSWIRVLSIIQLQQAGQPGKV*
Ga0070708_1004167973	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTIGDTAGHDGAEQQRLAHDLIEVHGNEAPVVARGNARAAALAGQPIVAKSWIRVLGIIQLQQASQPEKA*
Ga0070708_1020229202	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTIGGCGDQGGADKLARGLIEVHGNEAPTIARGNARSAALAGQPMLAKSWIRVLSMIQ
Ga0070698_1006838293	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTIGGCADQGGADKLARGLIEVHGNEAPTIARGNARSAALAGQPMLAKSWIRVLSMIQRQQAGQSKDI*
Ga0070699_1000806715	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTIGDTAGHDGAEQQRLAHDLIEVHGNEAPVVARGNARAAALAGQPIVAKSWIRVLGIIQLQQAGQPGKV*
Ga0066697_102691813	3300005540	Soil	MTIGDAGDHDGADQQRLARDLIEVHGNEAPTIARCNASTAALAGQPIVAKSWIRVLSIIQRQQAGEARKV*
Ga0066670_103004241	3300005560	Soil	MTIGDAGDHDGADQQRLARDLIEVHGDEAPAVARGNARTAALAGRPIVAKSWIRVLS
Ga0066699_103709203	3300005561	Soil	MTIGDAGGHDGADQQKLARDLIEVHGNEAPTVARGNARAAALAGQPMAAKSWIRVLSIIQRQQAGQSAKV*
Ga0066693_101875643	3300005566	Soil	MTIGDTVDRDGADQQRLARDLIEVHGHEAPAVARGNARIAALAGQPIVAKSWIRVLSMIQRQQAGEARKI*
Ga0066702_101209971	3300005575	Soil	MTIGDTVDRDGADQQRLARDLIEVHGHEAPAVARGNARTAALAGRPIVAKSWIRVLSIIQRQQAGEARKI*
Ga0066702_106586082	3300005575	Soil	MTIGDTVERDGADQQRLARDLIEVHGKEAPTIARGNARAAALAGQPIVAKSWIRVLSMIQRQQAGEARKI*
Ga0066702_106964302	3300005575	Soil	ADRQRDRGARPAVRSVMVGGAGDDGAADKLARDLIEVHGDEAPTIARGNARTAALAGQPALAKSWIRVLSIIQRQQAGRATDI*
Ga0066691_107520392	3300005586	Soil	MMIGGAGDDDGADKLARDLIEVHGNEAPTIARGNARTAAVAGQPTLAKSWIRVLSIIQRQQAGASKDI*
Ga0066706_111016652	3300005598	Soil	MTIGDAGDGHGVEKLARDLIEVHGDEAATIARGNARTAALAGQPTLAKSWIRVLSIIQRQQAGASEDI*
Ga0070717_104095583	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMLDGGGDNDGAGQQRLARDLIEVHGAEAPTVARGNARTAALAGQPALAKSWIRVLSIIQRHQAGQSRNI*
Ga0070717_112290372	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTIAGSGDDDGADKLARDLIEVHGNDAPTIARGNARTAALAGQPMLAKSWIRVLSMIQRQQTVGQRTSR*
Ga0066651_105402092	3300006031	Soil	MTIGDAGDHDGADQQRLARDLIEVHGNGAPAVARDNARTAALAGRPIVAKSWIRVLSIIQSRARQQAGQPGKV*
Ga0066651_106038302	3300006031	Soil	MTIGDTVDREGADQQRLARDLIEVHGDEAPTIARGNARTAALAGQPIVAKSWIRVLSIIQ
Ga0066652_1005673153	3300006046	Soil	MTIGETVDRDGADQQRLARDLIEVHGNEAPAVARDNARTAALAGRPIVAKSWIRVLSIIQRQQAGQPGKV*
Ga0066652_1019300871	3300006046	Soil	MTIGDTVDDGGADQQRLARDLIEVHGNEAPAVARGNARAAALAGQPIVAKCWIRVLSIIQRQQAGQAGKV*
Ga0070765_1000346602	3300006176	Soil	MTIGGSGDDDGAGKLARDLIEVHGNDAPTIARGNARTAALAGQPMLAKSWIRVLSMIQRQQGVSQRTSR*
Ga0070765_1002097732	3300006176	Soil	MTIGGSGDDDGAVKLARDLIEVHGNDAPTIARGNARTAALAGQPTLAKSWIRVLSMIQRQQVVGQRTSR*
Ga0066665_103829573	3300006796	Soil	MTIGDAGDGHGVEKLARDLIEVHGDEAPTIARGNARTAALAGQPALAKSWIRVLSIIQRQQAGASEDI*
Ga0066660_101924863	3300006800	Soil	MTIGDAGDGHGVEKLARDLIEVHGDEAATIARGNARTAARAGQPALAKSWIRVLSIIQRQQAGRATDI*
Ga0075425_1024436921	3300006854	Populus Rhizosphere	VTISDDRDRDAGDQQRLARDLIEVHGNEAPVVARGNARAAALAGQPIVAKSWIRVLSIIQLQQAGQPGKA*
Ga0074063_126490081	3300006953	Soil	MMLDGDNDAADRQRLAQDLIAVHGNEAPTVARGNARTAALAGQPALAKSWIRVLTIIQRQQAGQSRNI*
Ga0099795_100118802	3300007788	Vadose Zone Soil	MMLGAEDDDGAEQQRLARDLIAVHGNEAPAVARGNARTAALAGQLVLAKSWIRVLSIVQRQQAGQLKNI*
Ga0066710_1014602203	3300009012	Grasslands Soil	ADRQRDRGARSVVRSMTIGGAGDDDGVDKLARDLIEVHGSEAPTVARGNARTAALAGQPALAKSWIRVLSIIQRQQAGASEDI
Ga0066710_1018165453	3300009012	Grasslands Soil	MTMGGDDGKADKLARDLIEVHGNEAPTIARGNARTAALAGQPALAKSWIRVLSTIQRRQAGSPKNVSVQRIP
Ga0066710_1019004073	3300009012	Grasslands Soil	MTIGDAGDHDGADQQRLARDLIEVHGNEAPTIARGNARTAALAGQPIVAKSWIRVLSIIQRQQAGEARKV
Ga0099829_109484582	3300009038	Vadose Zone Soil	MTIGGAGDDDGAEKLARDLIGVHGNEAPTVARGNARAAALAGQPALAKSWIRVFSMIQRQQAGPSKGI*
Ga0066709_1000200274	3300009137	Grasslands Soil	MTIGDAGDHDGADQQRLARDLIEVHGNEAPTIARGNARTAALAGQPIVAKSWIRVLSIIQRQQAGEARKV*
Ga0066709_1001710332	3300009137	Grasslands Soil	MTIGDAGDGHGVEKLARDLIEVHGDEAATIARGNARTAALAGQPTLAKSWIRVLSIIQRQQADRSKDI*
Ga0099792_103601681	3300009143	Vadose Zone Soil	MTIGDTVDRDGADQQRLARDLIEVHGNEAPTIARGNARTAALAGQPIVAKSWIRVLSMIQRQQAGEARKI*
Ga0099796_104764052	3300010159	Vadose Zone Soil	MTIGDTVDRDGADQQRLARDLIEVHGNEAPAVARGNARTAALAGRPIVAKSWIRVLSIIQRQQAGQPGEV*
Ga0150983_110605634	3300011120	Forest Soil	MMLDGGGDNDAADQQRLARDLIEVHGDEAPTVARGNARTAALAGQPALAKSWIRVLSIIQRHQAGQSRNI*
Ga0150983_125309053	3300011120	Forest Soil	MTIRGSVDDDGAVKLARDLIEVHGNDAPTIARGNARTAALAGQPMLAKSWIRVLSMIQRQQGVSQRTSR*
Ga0137392_102655802	3300011269	Vadose Zone Soil	MTIGGAGDDDGVDKLARDLIEVHGDEAPMVARGNARTAALAGQPTLAKSWIRVLSTIQRQAGGSVKGHPGTEIQRSRT*
Ga0137391_100897074	3300011270	Vadose Zone Soil	MTIGGAGDDDGVDKLARDLIEVHGDEAPMVARGNARTAALAGQPTLAKSWIRVLSTIRRQAGGSVKGHPGTEIQRSRT*
Ga0137364_105633022	3300012198	Vadose Zone Soil	MTIGDTVDRDGADQQRLARDLIEVHGNGAPAVARDNARTAALAGRPIVAKSWIRVLSIIQSRARQQAGQPGKV*
Ga0137383_108744232	3300012199	Vadose Zone Soil	MMIGGAGDDDGADKLARDLIEVHGNEAPTIARGNARTAAVAGQPTLAKSWIRVLSVIQRQQAGASKDT*
Ga0137382_105060283	3300012200	Vadose Zone Soil	MTISDTVDRDGADQQRLARDLIEVHGNGAPAVARDNARTAALAGRPIVAKSWIRVLSIIQRQQAGEARKI*
Ga0137363_115984722	3300012202	Vadose Zone Soil	MTIGGAGDEDGADKLARGLIEVHGNEAPTIARGNARSAALASQPMLAKSWIRVLSIIQRQQAGQSRDV*
Ga0137399_100909775	3300012203	Vadose Zone Soil	MMLGAEDDDGAEQQRLARDLIAVHGNEAPAVARGNARTAALAAQLVLAKSWIRVLSIVQRQQAGQLKNI*
Ga0137399_102863534	3300012203	Vadose Zone Soil	MMIGDDDGADKLARDLIEVHGNEAPTIARGNARTAAVAGQPTLAKSWIRVLSIIQRQQAGASKDT*
Ga0137374_104083433	3300012204	Vadose Zone Soil	MTISGVGDDDGADKLARDLIAVHGNEAASVARGNARTAALAGQPALAKSWIRVLSIIQRQQADQSKDT*
Ga0137362_106918751	3300012205	Vadose Zone Soil	MMIGGAGDDDGADKLARDLIEVHGNEAPTIARGNARTAAVAGQPTLAKSWIRVLSIIQRQQAGASKDT*
Ga0137377_104995103	3300012211	Vadose Zone Soil	MTIGGAGDDDGADKLARDLIEVHGNEAPTIARGNARTAAVAGQPTLAKSWIRVLSVIQRQQAGASKDT*
Ga0137370_101203023	3300012285	Vadose Zone Soil	MTIGDTVDRDGADQQRLARDLIEVHGHEAPAVARGNARTAALAGRPIVAKSWIRVLSIIQSRARQQAGQPGKV*
Ga0137370_107981641	3300012285	Vadose Zone Soil	DQQRLARDLIEVHGNEAPTIARGNARTAALAGQPIVAKSWIRVLSIIQRQQAGQPGKV*
Ga0137360_104376713	3300012361	Vadose Zone Soil	MMIGGAGDDDGADKLARDLIEVHGNEAPTIARGNARTAAVAGQPTLAKSWIRVLSIIQRQQAGASKET*
Ga0137361_110146792	3300012362	Vadose Zone Soil	MMIGGAGDDDGADKLARDLIEVHGNEAPTIARGNARTAAVAGQPTLAKSWIRVLSVIQRQQAGASKDR*
Ga0134027_10142423	3300012364	Grasslands Soil	MTIGDTVDRDGADQQRLARDLIEVHGNGAPAVARDNARTAALAGRPIVAKSWIRVLSIIQRQQAGEARKV*
Ga0134037_11793201	3300012372	Grasslands Soil	MTIGDTVDRDGADQQRLARDLIEVHGKEAPTIARGNARAAALAGQPIVAKSWIRVLSIIQRQQAGEARKV*
Ga0150984_1134611243	3300012469	Avena Fatua Rhizosphere	MTIGDAGDHDGADQQRLARDLIEVHGDEAPAVARGNARTAALAGQPIVAKSWIRVLSIIQHQQAGQAGKI*
Ga0137358_101944324	3300012582	Vadose Zone Soil	MTIGGAGDDDAADKLARDLIEVHGNEAPTIARGNARTAAVAGQPTLAKSWIRVLSVIQRQQAGASKDR*
Ga0137358_108584722	3300012582	Vadose Zone Soil	MTIGDTVDRDGADQQRLARDLIEVHGNEAPAVARGNARTAALAGQPIVAKSWVRVLSIIQRQQAGQPGKV*
Ga0137359_105989343	3300012923	Vadose Zone Soil	DGAEQQRLARDLIAVHGNEAPAVARGNARTAALAGQLVLAKSWIRVLSIVQRQQAGQLKNI*
Ga0137413_103903581	3300012924	Vadose Zone Soil	MTGDGPNAQMLARDMIDVHGTEASVVARGNARTAALAGQPDRARSWIRVLGMIQRHQADNRS
Ga0137416_108944472	3300012927	Vadose Zone Soil	MTIGGAGDEDGADKLARGLIEVHGNEAPTIARGNARSAALASQPMLAKSWIRVLSIIQRQQAGQSKDI*
Ga0134078_105174812	3300014157	Grasslands Soil	MTIGDTVDDGGADQQRLARDLIEVHGNGAPAVARDNARTAALAGRPIVAKSWIRVLSIIQSRARQQAGQPGKV*
Ga0134079_104556002	3300014166	Grasslands Soil	MTIGDAGDHDGADQQRLARDLIEVHGDEAPAVARGNARAAALAGQRTIARSWIGVLSIIQRQQAGEARKI*
Ga0137412_105492193	3300015242	Vadose Zone Soil	PMMLGAEDDDGAEQQRLARDLIAVHGNEAPAVARGNARTAALAGQLVLAKSWIRVLSIVQRQQAGQLKNI*
Ga0134072_103422582	3300015357	Grasslands Soil	MTIGDAGDHDGADQQRLARDLIEVHGHEAPAVARGNARTAALAGRPIVAKSWIRVLSIIQRQQAGQPGKV*
Ga0132255_1041643352	3300015374	Arabidopsis Rhizosphere	MTINDADDRDGTDQQKLARDLIEVHGNEAPTIARGNARTAALAGQPIAAKSWIRVLSIIQRQLADQTGKVWMGKV*
Ga0066655_112289822	3300018431	Grasslands Soil	MTIGDTVDREGADQQRLARDLIEVHGNEAPTVARGNARAAALAGQPIVAKSWIGVLSIIQRQQAGEARKI
Ga0066667_114177061	3300018433	Grasslands Soil	MTMGGGDDGRADKLARDLIEVHGNEAPTIARGNARTAALAGQPALAKSWIRVLSTIQRQQAGSPKNVSVQRIP
Ga0066667_122896792	3300018433	Grasslands Soil	MTIGDAGDHDGADQQRLARDLIEVHGNEAPTIARGNARTAALAGQPIVAKSWIRVLSIIQRQQAGEARKI
Ga0066662_106137422	3300018468	Grasslands Soil	MTIGDTVDREGADQQRLARDLIEVHGNEAPTIARGNARTAALAGQPALAKSWIRVLSIIQRKQAGASRDI
Ga0066669_112914692	3300018482	Grasslands Soil	MTIGDTVDRDGADQQRLARDLIEVHGHEAPAVARGNARTAALAGRPIVAKSWIRVLSIIQRQQAGQAGKV
Ga0179592_102335801	3300020199	Vadose Zone Soil	MMLGAEDDDGAEQQRLARDLIAVHGNEAPAVARGNARTAALAGQLVLAKSWIRVLSIVQRQQAGQLKNI
Ga0210401_100839995	3300020583	Soil	MTIGGSGDDDGAGKLARDLIEVHGNDAPTIARGNARTAALAGQPMLAKSWIRVLSMIQRQQGVSQRTSR
Ga0210406_106051543	3300021168	Soil	MTIGGSGDDGGAGKLARDLIEVHGNDAPTIARGNARTAALARQPTLAKSWIRVLSIIQRQLAGASRDI
Ga0210400_1000267910	3300021170	Soil	MMLDGGGDNDGAGQQRLARDLIEVHGAEAPTVARGNARTAALAGQPALAKSWIRVLSIIQRQQAGQSRNI
Ga0210402_108106012	3300021478	Soil	MMLDDAGNDDGADQQRLAQDLIAVHGNEAPTVARGNARTAALAGQPALAKSWIRVLTIIQRQQAGQSRNI
Ga0210402_111196812	3300021478	Soil	MTIGGSGDDGGAGKLARDLIEVHGNDAPTIARGNARTAALARQPTLAKSWIRVLSIIQRQQAGASRDI
Ga0210409_110563032	3300021559	Soil	MTIGGSGDDDGAGKLARDLIEVHGNDAPTIARGNARTAALAGQPTLAKSWIRVLSVIQRQQAVSQGTSR
Ga0242656_10564351	3300022525	Soil	MTIGGSGDDDGAGKLARDLIEVHGNDAPTIARGNARTAALAGQPVLAKSWIRVLSIIQRQQAAQQRNI
Ga0242653_10099503	3300022712	Soil	MTIGGSGDDGGAGKLARDLIEVHGNDAPTIARGNARTAALAGQPTLAKSWIRVLSV
Ga0207700_110429481	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PMMLDGGGDNDGADQQRLARDLIEVHGDEAPTVARGNARTAALAGQPALAKSWIRVLSIIQRHQAGQSRNI
Ga0209152_101886072	3300026325	Soil	MTIGDAGDGHGVEKLARDLIEVHGDEAATIARGNARTAARAGQPALAKSWIRVLSIIQRQQADRSKDI
Ga0209804_12812822	3300026335	Soil	MTIGDAGDGHGVEKLARDLIEVHGDEAPTIARGNARTAALAGQPALAKSWIRVLSIIQRQQADRSKDI
Ga0209059_11625162	3300026527	Soil	MVGGAGDDGAADKLARDLIEVHGDEAPTIVRSNARTAALAGQPALAKSWIRVLSIIQRQQAGRATDI
Ga0209648_102007003	3300026551	Grasslands Soil	MTIDGAGDDGGADKLARGLIEVHGNEAPTIARGNARSAALASQPMLAKSWIRVLSMIQRQQAGQSKDI
Ga0209329_10992493	3300027605	Forest Soil	DGADKLACDLIEVHGNDAPTIARGNARTAALAGQPMLAKSWIRVLSMIQRQQAGAAKDI
Ga0209106_10140845	3300027616	Forest Soil	MMLGAEDDDGAEQQRLARDLIAVHGNEAPAVARGNARTAALAGQLVLAKSWIRVLSIVQRQQASQ
Ga0208981_10077014	3300027669	Forest Soil	MMLGAEDDDEAEQQRLARDLIAVHGNEAPAVARGNARTAALAGQLVLAKSWIRVLSIVQRQQAGQLKNI
Ga0208989_100990671	3300027738	Forest Soil	SPTAKAHCQRHRRPRSAVRPMMLGAEDDDGAEQQRLARDLIAVHGNEAPAVARGNARTAALAGQLVLAKSWIRVLSIVQRQQAGQLKNI
Ga0209488_101596623	3300027903	Vadose Zone Soil	MTIGDTVDRDGADQQRLARDLIEVHGNEAPAVARGNARTAALAGRPIVAKSWIRVLSIIQRQQAGQPGEV
Ga0209526_102509664	3300028047	Forest Soil	MMLDDAGNDDGADQQRLAQDLIAVHGNEAPMVARGNARTAALAGQPALAKSWIRVLTIIQRQQAGSSKNI
Ga0209526_104685132	3300028047	Forest Soil	MTIGGSGDDDGADKLACDLIEVHGNDAPTIARGNARTAALAGQPTLAKSWIRVLSMIQRQQAGAAKDI
Ga0137415_101101885	3300028536	Vadose Zone Soil	MMLGAEDDDGAEQQRLARDLIAVHGNEAPAVARGNARTAALAAQLVLAKSWIRVLSIVQRQQAGQLKNI
Ga0137415_113825912	3300028536	Vadose Zone Soil	MTIGGAGDEDGADKLARGLIEVHGNEAPTIARGNARSAALASQPMLAKSWIRVLSIIQRQQAGQSKDI
Ga0308309_102085521	3300028906	Soil	MTIGGSGDDDGAGKLARDLIEVHGNDAPTIARGNARTAALAGQPMLAKSWIRVLSMIQRQQVVGQRTSR
Ga0308309_112526042	3300028906	Soil	MTIGGSGDDDGAVKLARDLIEVHGNDAPTIARGNARTAALAGQPTLAKSWIRVLSMIQRQQVVGQRTSR
Ga0222749_107488272	3300029636	Soil	MMLDDVGNDDGADRQKLAQDLIAVHGNEAPTVARGNARTAALAGQRALAKSWIRVLSIIQRYQAG
Ga0308203_10435972	3300030829	Soil	MTIADTGDHDGADQQRLARDLIEVHGNEAPTVARGNVRTAALAGQPSVAKSWIRVLSIIQRRQAGQAGKV
Ga0308178_10091003	3300030990	Soil	VTIDDAVDHDAADQQRLARDLMEVHGNEAPTIARGNARTAALAGQPIVAKSWIRVLSIIQRQQAGEARKV
Ga0073994_122949362	3300030991	Soil	MMLDGGGDNDGAGQQRLAQDLIAVHGNEAPTVARENARTAALAGQPALAKSWIRVLSIIQRQQAGQSRNI
Ga0073997_100109233	3300030997	Soil	MTIGDTVDRDGADQQRLARDLIEVHGNEAPAVARGNARTAALAGRPIVAKSWIRVLSIIQRQQAG
Ga0073997_100170533	3300030997	Soil	MTIGGAGDDGAADKLARDLIEVHGNEAPMIARGNARTAAVAGQPTLAKSWIRVLSVIQRQQAGASKDTF
Ga0073997_100171861	3300030997	Soil	MMLDGGGDNDGAGQQRLAQDLIAVHGNEAPTVARENARTAALAGQPALAKSWIRVLSIIQRQQAGQ
Ga0073997_100207002	3300030997	Soil	MTIGHAGDHDGADQQRLARDLIEVHGNEAPTIARGNARTAALAGQPIVAKSWIRVLSIIQRQQAGEAS
Ga0073996_101333722	3300030998	Soil	VTIDDAVDDDAADQQRLARDLIEVHGNEAPAVARGNASAAALAGQPIVAKSWIRVLSIIQRQQAGQPRKV
Ga0138301_17743783	3300031022	Soil	MMLDGAGDNDGADQQRLARDLVEVHGDEAPAVARGNARTAALAGQPALAKSWIRVLSIIQRQQAVQSRNI
Ga0073998_100328455	3300031023	Soil	MMLDGAGDNDGAGQQKLAQDLIAVHGNEAPTVARGNARTAALAGQPALAKSWIRVLSIIQRQQAGQSRNI
Ga0073995_100044201	3300031047	Soil	MMLDGGGDNDGAGQQRLAQDLIAVHGNEAPTVARENARTAALAGQAALAKSWIRVLS
Ga0073995_118862262	3300031047	Soil	MTFGGAGDDDAADKLARDLIEVHGNEAPMIARGNARTAAVAGQPTLAKSWIRVLSIIQRQQAGASKDT
Ga0073995_120965502	3300031047	Soil	VTIDDAVDDDAADQQRLARDLIEVHGNEAPAVARGNASAAALAGQPIVAKSWIRVLSIIQRQQAGQSRNI
Ga0170834_1087066442	3300031057	Forest Soil	MMFDRTGDSGGAGNDDGADQQRLAQDLIAVHGNEAPTVARGNARTAALAGQPALAKSWIRVLSIIQRQQAGQSRNI
Ga0170824_1037856433	3300031231	Forest Soil	MMLDGAGDNDGADQQRLARDLIEVHGDEAPTVARGNARAAALAGQPALAKSWIRVLSIIQRQQAGQSRNI
Ga0170824_1238152402	3300031231	Forest Soil	MMLDGDNDAADRQRLAQDLIAVHGNEAPTVARGNARTAALAGQPALAKSWIRVLSIIQRQQAAQSRNI
Ga0308194_103995582	3300031421	Soil	MTIADTGDHDGADQQRLARDLIEVHGNEASTIARGNASAAALAGQPIAAKSWIRVLSIIQRRQAGQAGKV
Ga0307469_107024342	3300031720	Hardwood Forest Soil	MTIGDTAGHDGAEQQRLAHDLIEVHGNEAPVVARGNARAAALAGQPIVAKSWIRVLSIIQLQQAGQPGKA
Ga0307479_111229172	3300031962	Hardwood Forest Soil	MTIGGSGDDGGAGKLARDLIEVHGNDAPTIARGNARTAALARQPTLAKSWIRVLSVIQRQQAGAARDI
Ga0307471_1005645423	3300032180	Hardwood Forest Soil	MTTGDTAGHDGAEQQRLAHDLIEVHGNEAPVVARGNARAAALAGQPIVAKSWIRVLSIIQLQQAGQPGKV
Ga0307471_1020832332	3300032180	Hardwood Forest Soil	MMLDGGGDNDAADQQRLARDLIEVHGDEAPTVARGNARTAALASQPALAKSWIRVLSIIQRHQAG
Ga0370548_009236_131_343	3300034644	Soil	MTIADTGDHDGADQQRLARDLIEVHGNEAPTVARGNASAAALAGQPIVAKSWIRVLSIIQRRQAGQAGKV
Ga0370546_009066_3_173	3300034681	Soil	MTIADTGDHDGADQQRLARDLIGVHGNEAPTVARGNVRTAALAGQPSVAKSWIRVLS
Ga0370546_036827_445_651	3300034681	Soil	MTIGGAGDCDGTDTLARDLIEVHGNEAPSVARGNARAAALAGQPALAKSWIRVLSMIQRQQAAPPKNI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056779

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences