Metagenome Family F056728

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056728
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	96 residues
Representative Sequence	MSWKAQHEKIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVGPVWAALEEINNEIGYEEK
Number of Associated Samples	111
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.18 %
% of genes near scaffold ends (potentially truncated)	26.28 %
% of genes from short scaffolds (< 2000 bps)	76.64 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.372 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (19.708 % of family members)
Environment Ontology (ENVO)	Unclassified (33.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.577 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.00% β-sheet: 0.00% Coil/Unstructured: 36.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
a.1.1.0: automated matches	d4po5a1	4po5	0.66648
a.1.1.3: Phycocyanin-like phycobilisome proteins	d1b8da_	1b8d	0.664
a.1.1.3: Phycocyanin-like phycobilisome proteins	d3l0fa_	3l0f	0.65776
a.1.1.3: Phycocyanin-like phycobilisome proteins	d1xg0c_	1xg0	0.65712
a.111.1.1: Type 2 phosphatidic acid phosphatase, PAP2	d1d2ta_	1d2t	0.65424

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF07883	Cupin_2	2.92
PF13360	PQQ_2	2.19
PF03629	SASA	2.19
PF01170	UPF0020	2.19
PF07690	MFS_1	1.46
PF00069	Pkinase	1.46
PF12681	Glyoxalase_2	1.46
PF02798	GST_N	1.46
PF04978	DUF664	1.46
PF00581	Rhodanese	1.46
PF13561	adh_short_C2	1.46
PF07584	BatA	0.73
PF00459	Inositol_P	0.73
PF00005	ABC_tran	0.73
PF02979	NHase_alpha	0.73
PF00144	Beta-lactamase	0.73
PF00248	Aldo_ket_red	0.73
PF13671	AAA_33	0.73
PF11964	SpoIIAA-like	0.73
PF04828	GFA	0.73
PF08757	CotH	0.73
PF13508	Acetyltransf_7	0.73
PF13424	TPR_12	0.73
PF13242	Hydrolase_like	0.73
PF13649	Methyltransf_25	0.73
PF01872	RibD_C	0.73
PF01509	TruB_N	0.73
PF12840	HTH_20	0.73
PF13669	Glyoxalase_4	0.73
PF07927	HicA_toxin	0.73
PF13419	HAD_2	0.73
PF05721	PhyH	0.73
PF01925	TauE	0.73
PF00072	Response_reg	0.73
PF13564	DoxX_2	0.73
PF10077	DUF2314	0.73
PF06736	TMEM175	0.73
PF13516	LRR_6	0.73
PF12680	SnoaL_2	0.73
PF00400	WD40	0.73
PF00793	DAHP_synth_1	0.73
PF08388	GIIM	0.73
PF06983	3-dmu-9_3-mt	0.73
PF00156	Pribosyltran	0.73
PF01817	CM_2	0.73
PF13545	HTH_Crp_2	0.73
PF00535	Glycos_transf_2	0.73
PF16363	GDP_Man_Dehyd	0.73
PF06782	UPF0236	0.73
PF13302	Acetyltransf_3	0.73
PF13860	FlgD_ig	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.84
COG0116	23S rRNA G2445 N2-methylase RlmL	Translation, ribosomal structure and biogenesis [J]	2.19
COG0286	Type I restriction-modification system, DNA methylase subunit	Defense mechanisms [V]	2.19
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	2.19
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	2.19
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	2.19
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	2.19
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	2.19
COG2263	Predicted RNA methylase	General function prediction only [R]	2.19
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	2.19
COG2813	16S rRNA G1207 or 23S rRNA G1835 methylase RsmC/RlmG	Translation, ribosomal structure and biogenesis [J]	2.19
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	2.19
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.73
COG5337	Spore coat protein CotH	Cell wall/membrane/envelope biogenesis [M]	0.73
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.73
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.73
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.73
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.73
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.73
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.73
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.73
COG1605	Chorismate mutase	Amino acid transport and metabolism [E]	0.73
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.73
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.73
COG0130	tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA	Translation, ribosomal structure and biogenesis [J]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.37 %
Unclassified	root	N/A	22.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.37 %
Unclassified	root	N/A	22.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.37 %
Unclassified	root	N/A	22.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.49 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.46 %
Elusimicrobia	phylum	All Organisms → cellular organisms → Bacteria → Elusimicrobia	1.46 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.63 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.92 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.19 %
unclassified Elusimicrobiota	no rank	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota	1.46 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.46 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	2.19 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.19 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.46 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	1.46 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.46 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.46 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.73 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.73 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.73 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.73 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2.19 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.19 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.46 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.46 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	1.46 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.73 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.73 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.73 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.73 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.73 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.73 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.73 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.73 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.19 %
Rubritaleaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Rubritaleaceae	1.46 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.46 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	1.46 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.73 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.73 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.73 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.73 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.73 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.73 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.73 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.73 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.73 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.73 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.73 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.19 %
Rubritalea	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Rubritaleaceae → Rubritalea	1.46 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.46 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	1.46 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.73 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.73 %
Kovacikia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Kovacikia	0.73 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	0.73 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.73 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.73 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.73 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.73 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.73 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.73 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.73 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.19 %
Rubritalea marina	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Rubritaleaceae → Rubritalea → Rubritalea marina	1.46 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.46 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	1.46 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.73 %
Kovacikia minuta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Kovacikia → Kovacikia minuta	0.73 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.73 %
Pyxidicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Pyxidicoccus	0.73 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.73 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.73 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.73 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.73 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.73 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.73 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.73 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.19 %
Rubritalea marina	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Rubritaleaceae → Rubritalea → Rubritalea marina	1.46 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.46 %
Elusimicrobia bacterium GWA2_38_7	species	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	1.46 %
Pyxidicoccus caerfyrddinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Pyxidicoccus → Pyxidicoccus caerfyrddinensis	0.73 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.73 %
Kovacikia minuta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Kovacikia → Kovacikia minuta	0.73 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.73 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.73 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.73 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.73 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	0.73 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.73 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.73 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.73 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_13831766	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300000550\|F24TB_10749463	Not Available	579	Open in IMG/M
3300000559\|F14TC_104540591	Not Available	1445	Open in IMG/M
3300000559\|F14TC_108309016	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300000956\|JGI10216J12902_113413323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	2130	Open in IMG/M
3300001605\|Draft_10287089	Not Available	921	Open in IMG/M
3300003323\|rootH1_10022887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Rubritaleaceae → Rubritalea → Rubritalea marina	5833	Open in IMG/M
3300003323\|rootH1_10057482	All Organisms → cellular organisms → Bacteria	2702	Open in IMG/M
3300003994\|Ga0055435_10060596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	935	Open in IMG/M
3300004025\|Ga0055433_10171459	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300004463\|Ga0063356_101774511	Not Available	926	Open in IMG/M
3300005093\|Ga0062594_100178428	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	1443	Open in IMG/M
3300005294\|Ga0065705_10204023	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300005332\|Ga0066388_101136659	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300005332\|Ga0066388_102922811	Not Available	873	Open in IMG/M
3300005526\|Ga0073909_10403682	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005539\|Ga0068853_100650317	Not Available	1003	Open in IMG/M
3300005614\|Ga0068856_100563555	Not Available	1160	Open in IMG/M
3300005713\|Ga0066905_100055507	Not Available	2455	Open in IMG/M
3300005713\|Ga0066905_100393250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1122	Open in IMG/M
3300005764\|Ga0066903_101057936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	1491	Open in IMG/M
3300005841\|Ga0068863_101936034	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006040\|Ga0073914_10041549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	834	Open in IMG/M
3300006046\|Ga0066652_101672744	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300006196\|Ga0075422_10019228	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300006844\|Ga0075428_100000230	All Organisms → cellular organisms → Bacteria	54502	Open in IMG/M
3300006845\|Ga0075421_100183838	All Organisms → cellular organisms → Bacteria	2597	Open in IMG/M
3300006845\|Ga0075421_101150572	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300006846\|Ga0075430_100053206	All Organisms → cellular organisms → Bacteria → Proteobacteria	3409	Open in IMG/M
3300006847\|Ga0075431_100172773	All Organisms → cellular organisms → Bacteria → Proteobacteria	2220	Open in IMG/M
3300006852\|Ga0075433_10182922	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300006853\|Ga0075420_100025981	All Organisms → cellular organisms → Bacteria → Proteobacteria	5246	Open in IMG/M
3300006853\|Ga0075420_101138908	Not Available	671	Open in IMG/M
3300006853\|Ga0075420_101874111	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006854\|Ga0075425_100942858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300006880\|Ga0075429_100037205	All Organisms → cellular organisms → Bacteria	4237	Open in IMG/M
3300006880\|Ga0075429_100274089	All Organisms → cellular organisms → Bacteria → Elusimicrobia → unclassified Elusimicrobiota → Elusimicrobia bacterium GWA2_38_7	1477	Open in IMG/M
3300009094\|Ga0111539_11445008	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300009094\|Ga0111539_12239529	Not Available	634	Open in IMG/M
3300009094\|Ga0111539_13109141	Not Available	536	Open in IMG/M
3300009100\|Ga0075418_10376609	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300009100\|Ga0075418_10440114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1396	Open in IMG/M
3300009156\|Ga0111538_10929504	Not Available	1101	Open in IMG/M
3300009162\|Ga0075423_10133871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2602	Open in IMG/M
3300009553\|Ga0105249_11874069	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300009597\|Ga0105259_1003316	All Organisms → cellular organisms → Bacteria	2907	Open in IMG/M
3300009610\|Ga0105340_1002609	All Organisms → cellular organisms → Bacteria	7734	Open in IMG/M
3300009610\|Ga0105340_1029460	All Organisms → cellular organisms → Bacteria	2132	Open in IMG/M
3300009610\|Ga0105340_1377970	Not Available	629	Open in IMG/M
3300009678\|Ga0105252_10097602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Rubritaleaceae → Rubritalea → Rubritalea marina	1176	Open in IMG/M
3300010046\|Ga0126384_10040871	All Organisms → cellular organisms → Bacteria	3140	Open in IMG/M
3300010047\|Ga0126382_10692585	Not Available	853	Open in IMG/M
3300010362\|Ga0126377_12666355	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300010366\|Ga0126379_13727042	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010399\|Ga0134127_11427935	Not Available	763	Open in IMG/M
3300010400\|Ga0134122_11455377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Pyxidicoccus → Pyxidicoccus caerfyrddinensis	702	Open in IMG/M
3300011409\|Ga0137323_1006281	All Organisms → cellular organisms → Bacteria → Proteobacteria	2851	Open in IMG/M
3300011429\|Ga0137455_1129726	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300011430\|Ga0137423_1118692	Not Available	792	Open in IMG/M
3300011432\|Ga0137428_1194947	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300011435\|Ga0137426_1000135	All Organisms → cellular organisms → Bacteria	14395	Open in IMG/M
3300011437\|Ga0137429_1175578	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300011441\|Ga0137452_1124517	All Organisms → cellular organisms → Bacteria → Proteobacteria	859	Open in IMG/M
3300011445\|Ga0137427_10496681	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300012041\|Ga0137430_1008352	All Organisms → cellular organisms → Bacteria	2599	Open in IMG/M
3300012041\|Ga0137430_1070110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	968	Open in IMG/M
3300012161\|Ga0137336_1089908	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012173\|Ga0137327_1056081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Kovacikia → Kovacikia minuta	867	Open in IMG/M
3300012174\|Ga0137338_1012280	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300012232\|Ga0137435_1000766	All Organisms → cellular organisms → Bacteria	9993	Open in IMG/M
3300012232\|Ga0137435_1265507	Not Available	520	Open in IMG/M
3300012924\|Ga0137413_11080402	Not Available	634	Open in IMG/M
3300012929\|Ga0137404_10154706	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300012948\|Ga0126375_12006539	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300013306\|Ga0163162_11881228	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300014168\|Ga0181534_10095102	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300014494\|Ga0182017_10004139	All Organisms → cellular organisms → Bacteria	10801	Open in IMG/M
3300014868\|Ga0180088_1059357	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300015254\|Ga0180089_1016762	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300015255\|Ga0180077_1145149	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300015371\|Ga0132258_11543529	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300015372\|Ga0132256_100640739	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300015374\|Ga0132255_105311549	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300017792\|Ga0163161_10770862	Not Available	806	Open in IMG/M
3300018031\|Ga0184634_10094860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1296	Open in IMG/M
3300018031\|Ga0184634_10197047	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300018059\|Ga0184615_10012280	All Organisms → cellular organisms → Bacteria → Proteobacteria	4675	Open in IMG/M
3300018059\|Ga0184615_10017178	All Organisms → cellular organisms → Bacteria	3973	Open in IMG/M
3300018063\|Ga0184637_10025803	All Organisms → cellular organisms → Bacteria	3543	Open in IMG/M
3300018063\|Ga0184637_10392189	Not Available	828	Open in IMG/M
3300018072\|Ga0184635_10004293	All Organisms → cellular organisms → Bacteria	4529	Open in IMG/M
3300018078\|Ga0184612_10086731	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300018079\|Ga0184627_10064293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1912	Open in IMG/M
3300018082\|Ga0184639_10249732	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300018084\|Ga0184629_10587059	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300019360\|Ga0187894_10148437	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300020057\|Ga0163151_10042941	All Organisms → cellular organisms → Bacteria	3370	Open in IMG/M
3300025160\|Ga0209109_10221793	Not Available	926	Open in IMG/M
3300025165\|Ga0209108_10297869	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300025923\|Ga0207681_10990044	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300025924\|Ga0207694_10000655	All Organisms → cellular organisms → Bacteria	31260	Open in IMG/M
3300025930\|Ga0207701_10737526	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	833	Open in IMG/M
3300026078\|Ga0207702_10525109	Not Available	1156	Open in IMG/M
3300026078\|Ga0207702_10607746	Not Available	1073	Open in IMG/M
3300026457\|Ga0255160_1076700	Not Available	549	Open in IMG/M
3300027362\|Ga0208320_1001813	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2460	Open in IMG/M
3300027533\|Ga0208185_1003710	All Organisms → cellular organisms → Bacteria	3927	Open in IMG/M
3300027533\|Ga0208185_1013850	Not Available	2016	Open in IMG/M
3300027695\|Ga0209966_1091366	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300027821\|Ga0209811_10424070	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300027880\|Ga0209481_10458987	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300027907\|Ga0207428_10018962	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5867	Open in IMG/M
3300027907\|Ga0207428_11185636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300027907\|Ga0207428_11234416	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300027907\|Ga0207428_11253371	Not Available	515	Open in IMG/M
3300027909\|Ga0209382_10546414	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300027909\|Ga0209382_11725172	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300027993\|Ga0247749_1038575	Not Available	561	Open in IMG/M
3300031057\|Ga0170834_103825054	Not Available	588	Open in IMG/M
3300031538\|Ga0310888_10034975	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300031547\|Ga0310887_10256581	Not Available	978	Open in IMG/M
3300031562\|Ga0310886_10059746	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300031576\|Ga0247727_10516633	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300031716\|Ga0310813_10779384	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300031820\|Ga0307473_11133256	Not Available	578	Open in IMG/M
3300031847\|Ga0310907_10111524	Not Available	1199	Open in IMG/M
3300031879\|Ga0306919_10898807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300031943\|Ga0310885_10043966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1820	Open in IMG/M
3300032013\|Ga0310906_11116184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	571	Open in IMG/M
3300032017\|Ga0310899_10053849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1484	Open in IMG/M
3300032180\|Ga0307471_103541870	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300033407\|Ga0214472_10233213	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300033815\|Ga0364946_093547	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300033815\|Ga0364946_105086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300033815\|Ga0364946_109301	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300034177\|Ga0364932_0099884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1102	Open in IMG/M
3300034178\|Ga0364934_0249272	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.15%
Host-Associated	Host-Associated	32.12%
Engineered	Engineered	0.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	36.50%
Plants	Host-Associated → Plants	32.12%
Aquatic	Environmental → Aquatic	30.66%
Wastewater	Engineered → Wastewater	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	31.39%
Sediment	Environmental → Aquatic → Sediment	27.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.03%
Floodplain	Environmental → Terrestrial → Floodplain	3.65%
Freshwater	Environmental → Aquatic → Freshwater	2.19%
Marine	Environmental → Aquatic → Marine	1.46%
Cave	Environmental → Terrestrial → Cave	1.46%
Rhizome	Host-Associated → Plants → Rhizome	1.46%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	27.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.57%
Loam	Environmental → Terrestrial → Soil → Loam	5.84%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.46%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.46%
Lake	Environmental → Aquatic → Freshwater → Lake	0.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.73%
River	Environmental → Aquatic → Freshwater → River	0.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.73%
Sand	Environmental → Terrestrial → Soil → Sand	0.73%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	27.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.19%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.46%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.73%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.73%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.73%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.73%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	19.71%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	18.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.19%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.46%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.46%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.46%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.73%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.73%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.73%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.73%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.73%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001605	Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin	Engineered	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006040	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_30-Apr-14	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012161	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026457	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8h	Environmental	Open in IMG/M
3300027362	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_138317662	3300000363	Soil	MSWKSDANKIYEARVIQDGLDRLAQRVDTKNIPFSGEELHTLAKRSREAMWSEKKKDRLNRYKVHLAARYGEECVREISAALEEINNEIGYEEK*
F24TB_107494631	3300000550	Soil	MGWKGQHHKIYEATVVTESLARLAKXFDLTTLPFSDEELQTLAKRARQSFRAFGSEEKKERLARYKAHLSSLYGEQSVEPVW
F14TC_1045405912	3300000559	Soil	MGWKGQHHKIYEATVVTESLARLAKQFDLTTLPFSDEELRTLAKRARESFNAFGSVEKKXXXXXXXAHLSSLYGEQSVGPVWAALEEINTQIGWEEK*
F14TC_1083090161	3300000559	Soil	MSWKTEARKIYEARVVTDSLARLAQRFDLKSLPFSDEELQTLATRARESFRSEKKRARLDRYKAHLSTLYGEERVGTISAALQEINNEIGYEEK*
JGI10216J12902_1134133232	3300000956	Soil	MSWRAEHRKIYEARVVADSLTRLAKRFDLTTFPFSDEELRTLALRARQSFRAFQSDEKKERLGRYRTHLSARYGEANVGPVWSALEEINNEIGYEEK*
Draft_102870892	3300001605	Hydrocarbon Resource Environments	MSWKTKHHKVYEARVVTDALARLAKRFDLATLPFSGEELQTLATRARESFRAFESDEKQQRLARYMTHLASLYGEERVGPVWAALVEINNEIGYEEK*
rootH1_100228878	3300003323	Sugarcane Root And Bulk Soil	MSWKAEHRKIYEARVVTDALARLAKRFDLATLPFKGEELQTLATRARESFRAYGSDEKQQRLAGYRTHLAGLYGEERVGPVWAALVEINNEIGYEEK*
rootH1_100574822	3300003323	Sugarcane Root And Bulk Soil	MSRKADHQRVYEERVVTDSLTRLATRFDLKTLPFSDEELRTLAERARESFRAFRSEEKKKRLARYRAHLSSLYGEESVGPVWAALEKINNEIGYEEK*
Ga0055435_100605962	3300003994	Natural And Restored Wetlands	MSWKAEASRMYEARVVTDSLARLAKRFDLKTLPFSDEELQTLAKRARESFRAYRSEEKKERLGRYKAHLCTLYGETCVGPVWAALEEINNEIGYEEK*
Ga0055433_101714591	3300004025	Natural And Restored Wetlands	MYEARVVTDSLARLAKRFDLKTLPFSDEELQTLAKRARESFRAYRSEEKKERLGRYKAHLCTLYGETCVGPVWAALEEINNEIGYEEK*
Ga0063356_1017745111	3300004463	Arabidopsis Thaliana Rhizosphere	MGWKAQHHKVYEARVVTDSLARLAKRFDLTALPFSGEELQTLAKRARESFRAFGSDEKKKRLARYRAHLSSLYGEESVGPV
Ga0062594_1001784283	3300005093	Soil	MSWKAQHEKIYEARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFRSEEKKERLARYKAHLSSLYGEQSVGPVWAALEEINNEIGYEEK*
Ga0065705_102040232	3300005294	Switchgrass Rhizosphere	MSWKAQHQKIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVEPVWAALEEINNEIGYEEK*
Ga0066388_1011366592	3300005332	Tropical Forest Soil	MSWKSRTHKIYEARVVDDSLARLASRCDIKSVPFSEDELRTLARRAREFFRAYGSEEKRARLAKYKKYLCTLYGDASVEPVWAALQDINNEIGYEEK*
Ga0066388_1029228112	3300005332	Tropical Forest Soil	MSVKAHDKAYEARVVAESLARLAKRFDLTTLPFSPEQLQTLAKRARESFRAFGSEEKKGRLARYKTHLSTLHEGAIVGAVWAALEEINNEIGYEEK*
Ga0073909_104036822	3300005526	Surface Soil	MSWKAQHQRTYEARVVADSLARLAKRFDLTTLPLSDEELQTLARRARQSFRAFGSEEKKERLARYKAHLSSLYGEHSVDPVWAALEEINNEIGYEEK*
Ga0068853_1006503171	3300005539	Corn Rhizosphere	MSWKSEHDKTYEARVVRDSLARLATRLDLKSLPFSEAELQTLAKRARESFRAIRSPEKRERLASFRSHLSARYGEPSVGPVWAALEQINNEIGYEEK*
Ga0068856_1005635552	3300005614	Corn Rhizosphere	MSWKAEHQKIYEARVVTDALARLGKRFDLATLPFSAEELQTLATRARESFRAHGSEEKQQRLTGYRTHLAGLYGEERVGPVWAALVEINNEIGYEEK*
Ga0066905_1000555071	3300005713	Tropical Forest Soil	MSWKAQHHKAYEARVVTDSLARLAKRFDLTTLPFSHEELQTLAKRARESFRAFGSEKKKERLARYKAHLSTLHGEASVGAVWAALEEINNEIGYEEK*
Ga0066905_1003932503	3300005713	Tropical Forest Soil	MSSKAHHQKAYEARVVTDSLARLAKRFDLTALPFSDEELQTLAKRARESYRAFGSEAKKERLARYKAHLSTLYGEASVGPVWAALEEINNEIGYEEK*
Ga0066903_1010579362	3300005764	Tropical Forest Soil	VVADSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKEQLAKYKAHLSTLYGEASVGPVWAALEEINNEIGYEEK*
Ga0068863_1019360341	3300005841	Switchgrass Rhizosphere	QHHKIYEARVVADSLARLAKRFDLTTLPFSEQELQTLAERARESFRAFGSEEKKERLARYKAHLSTLYGEASVGPVWAALGEINNEIGYEEK*
Ga0073914_100415492	3300006040	Sand	DAMSWKAQHQRIYEERVVTDSLARLAKRIDLATLPFSGEELQTLAKRARESFRAYPSEEKKERLGKYKAHLSGLYGEERVGPVWAALEEINNEIGYEEK*
Ga0066652_1016727441	3300006046	Soil	MSWKAEHQKIYEARVVTDALARLAKRFDLATLPFSAEELQTLATRARESFRAHGSDEKQQRLAGFRTHLAGLYGEESVGPVWAALVEINNEIGYEEK*
Ga0075422_100192282	3300006196	Populus Rhizosphere	MSWKAQHQKIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFRSEEKKERLARYKAHLSSLYGEQSVGPVWAALEEINNEIGYEEK*
Ga0075428_10000023033	3300006844	Populus Rhizosphere	MSWKAEAHKIYEARMVKEALAKLAGRVDLKTLPFSEEELHTLAKRARESFRGRERNRERFDKYKAHLSAIHGKEIVETISIALVEINNALGYEEK*
Ga0075421_1001838383	3300006845	Populus Rhizosphere	ITTMSWKAEAHKIYEARVVADALARLAKRFDLKSLPFSDNELHTLARRAREAFRSEKKKERLNKYKAHLSSLYGEERVGPIAAALHKINNEIGYEEK*
Ga0075421_1011505722	3300006845	Populus Rhizosphere	MSWKAQHEKIYEARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGERSVEPVWAALE
Ga0075430_1000532065	3300006846	Populus Rhizosphere	VSWKAQHHKIYEARVVADSLARLAKRFDLTTLPFSEEELQTLAKRARESFRAYRSEEKKERLARYKTHLSILHGETSVEPVWAALEEINNEIGYEEK*
Ga0075431_1001727732	3300006847	Populus Rhizosphere	MSWKAEAHKIYEARVVADALARLAKRFDLKSLPFSDNELHTLARRAREAFRSEKKKGRLNKYKAHLSSLYGEERVGPIAAALHKINNEIGYEEK*
Ga0075433_101829222	3300006852	Populus Rhizosphere	MGWKGQHHKIYEATVVTESLARLAKQLDLTTLPFSDEELRTLAKRARESFNAFGSEEKKARLARYKAHLSSLYGEQSVGPVWSALEEINTQIGWEEK*
Ga0075420_1000259814	3300006853	Populus Rhizosphere	MSWKAEAHKIYEARVVADALARLAKRFDLKSLPFSDNELHTLARRAREAFRSEKKKERLNKYKAHLSSLYGEERVGPIAAALHKINNEIGYEEK*
Ga0075420_1011389081	3300006853	Populus Rhizosphere	VTSLVTARLAIRGKTAMGWKAQHHKVYEARVVTDSLARLAKRFDLTALPFSSEELQTLAKRARESFRAFGSDEKRQRLARYR
Ga0075420_1018741111	3300006853	Populus Rhizosphere	MSWKAQHQKIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQRVEPVWAALEEINNEIGYEEK*
Ga0075425_1009428582	3300006854	Populus Rhizosphere	MSWKAEHHKVYEARVVTDSLARLAKRFDLTTLPFSHEELQTLAKRARQSFRAFRSEEKKERVARYKAYLATLHGEAIVGAVWAALEEINNEIGYEEK*
Ga0075429_1000372053	3300006880	Populus Rhizosphere	MSWKNEARKVYEARVVVDSLSRLAKRVDLKSLPFLDEELQTLARRARESFRSENKRERLDRYKAHLSSLYGEEHVAAISAALEDINNEIGYEEK*
Ga0075429_1002740892	3300006880	Populus Rhizosphere	DSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFRSEEKKERLARYKAHLSSLYGEQSVGPVWAALEEINNEIGYEEK*
Ga0111539_114450081	3300009094	Populus Rhizosphere	HAMSWKAQHEKIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEHSVGPVWAALEEINNEIGYEEK*
Ga0111539_122395291	3300009094	Populus Rhizosphere	MSRKAEATKIYEARVVTDALARLAKRFDLKALPFSDEELQTLAKRARESFRAFRSEEKKERLGRYKAQLSTLYGEACVGPVWAALEQINNEIGYEEK*
Ga0111539_131091411	3300009094	Populus Rhizosphere	MSWKAEHHKIYEARVVKDALGRLAARFDLKSLPFSEDELHTLAKRTRESFYGRERKRERLERYKAHLAARHGKESVERISAALEDINNAIGYEEK*
Ga0075418_103766093	3300009100	Populus Rhizosphere	VSWKAQHHKVYEARVVTDSLARLAKRFDLTALPFSGEELQTLAKRARESFRAYGSDEKMKRLARYRAYLSSLYGEESVGPVWAALEEINNEIGYEEK*
Ga0075418_104401141	3300009100	Populus Rhizosphere	MSWKAEAHKIYEARVVADALARLAKRFDLKSLPFSDNELHTLARRAREAFRSEKKKERLNKYKAHLSSLYGEERVGPIAAALHKVNNEIG
Ga0111538_109295042	3300009156	Populus Rhizosphere	MSWKAEHHKIYEARVVKDALGRLAARFDLKSLPFSEDELHTLAKRTRESFYGRERKRERLEKYKAHLAARHGKESVERISAALEDINNAIGYEEK*
Ga0075423_101338712	3300009162	Populus Rhizosphere	MSWKAEHHKVYEARVVTDSLARLAKRFDLTTLPFSHEELQTLAKRARQSFRAFRSEEKKERLARYKAYLATLHGEAIVGAVWAALEEINNEIGYEEK*
Ga0105249_118740691	3300009553	Switchgrass Rhizosphere	QHQKIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFRSEEKKERLARYKAHLSSLYGEQSVEPVWAALEEINNEIGYEEK*
Ga0105259_10033163	3300009597	Soil	MSWKAEAQKIYEARVIKDALDRLAARFDTKNLPLSAEELQTLAKRAREAFRSEKKKDRLDRYKAHLASRYGEESVGPVSAALEEINNAIGYEEK*
Ga0105340_10026092	3300009610	Soil	MSWKAEHEKIYEARVVADSLARLAKRFDLTTLPFTSDELQTLAKRARESFRAHGSEEKKERLAKYKAHLSGLYGEASVGPVWGALEEINNEIGYEEK*
Ga0105340_10294603	3300009610	Soil	MGWKAKHHKIYEASVVSDALGRLAKRFDLKTLPFSDEELQTLAKRARESFSAFGSEEKKQRLGKYKAHLSSLYGEACVGPVWAALEEINNEIGYEEK*
Ga0105340_13779701	3300009610	Soil	MSWKAEAQKIYEARVIKDALDRLAARFDTKNLPLSAEELQTLAKRAREAFRSEKKKDRLDRYKAHLASRYGEESVGPVSAALEEINNAI
Ga0105252_100976022	3300009678	Soil	MSWKAEAHKTYERRVIADALARLAKRCDLKSFPFSDEELQTLARRARESFGSDRKKERLERYREHLSTLHGKEPVDAISTVLQDIINEIGYEEK*
Ga0126384_100408712	3300010046	Tropical Forest Soil	MSSKAHHQKAYEARVVTDSLARLAKRFDLTPLPFSDEELQTLAKRARESYRAFGSEAKKERLARYKAHLSTLYGEASVGPVWAALEEINNEIGYEEK*
Ga0126382_106925851	3300010047	Tropical Forest Soil	MSWKAQHHKAYEARVVADSLARLAKRFDLTTLPLSHEELQTLAKRARESFRAFGSEVKKERLARYKTHLSTLYGEASVGAVWAALEEINNEIGYEEK*
Ga0126377_126663551	3300010362	Tropical Forest Soil	LKTQHHKAYEARVVADSLARLAKRFDLTALPISHEELQTLAKRARESFRAFGSKEKIERLARYKAHLSTLYGEASVGAIWAALEEINNEIGYEEK*
Ga0126379_137270421	3300010366	Tropical Forest Soil	MSSKAEHQKIYEGRVVADSLARLAKRFDLKTLPFTDEELQTLAKRARESFRAFGSEEKKERLGKYKAHLSTLYGETCVGPVWAALVEINNEIGYEEK*
Ga0134127_114279351	3300010399	Terrestrial Soil	MSWKAEAHKIYEARMVKEALAKLAERVELKTLPFSEEELHTLAKRARESFRGRERNRERFDKYKAHLSAIHGKEIVETISIALVEINNALGYEEK*
Ga0134122_114553771	3300010400	Terrestrial Soil	MSWKARDQKIYEARVVAESLARLAKRRDLTTIPFSDEELQTLARRARESFRAFGSEEKKERLARYKTHLASLYGGQIVESVWAALEEINNEIGYEEK*
Ga0137323_10062812	3300011409	Soil	MSWKAQHHKIYEARVVADSLARLAKRFDLTTLPFSEQELQTLAERARQSFRAFGSEEKKERLARYKAHLSTLYGEASVGPVWAALEEINNEIGYEEK*
Ga0137455_11297261	3300011429	Soil	MSWKAQHDKIYEARVVTDSLARLAKRFDLTSLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKTHLSALYGEASVGPVWAALEEINNEIGYEEK*
Ga0137423_11186922	3300011430	Soil	MSWKTEARKIYEARVVTDSLARLAKRFDLKSLPFSDEELQTLATRARESFRSEKKRERLDRYKAQLSTLYGAERVGTISAALQDINNAIGYEEK*
Ga0137428_11949471	3300011432	Soil	MSWKTEARKIYEARVVTDSLARLAKRFDLKSLPFSDEELQTLATRARESFRSEKKRERLDRYKAHLSTLYGAERVGTISAALQDINNAI
Ga0137426_100013513	3300011435	Soil	YEARVIKDALDRLAARFDTKNLPLSAEELQTLAKRAREAFRSEKKKDRLDRYKAHLASRYGEESVGPVSAALEEINNAIGYEEK*
Ga0137429_11755782	3300011437	Soil	MSWKAQHDKIYEARVVTDSLARLAKRFDLTSLPFWDEELQTLAKRARESFRAFGSEEKKERLARYKTHLSALYGEASVGPVWAALEEINNEIGYEEK*
Ga0137452_11245172	3300011441	Soil	MAFAMAADARRLPGTLIWPLGTLMSWKAKHHRIYEARVVSDALGRLAKRFDLKTLPFSDEELQTLAKRARESFNAFRSEEKKLRLGKYKAHLASLYGEACVGPVWAALEEINNEIGYEEK
Ga0137427_104966812	3300011445	Soil	MSWKTEARKSYEARVVTDSLARLAKRFDLKSLPFSDEELQTLATRARESFRSEKKRERLDRYKAQLSTLYGAERVGTISAALQDINNAIGYEEK*
Ga0137430_10083521	3300012041	Soil	SWKAEAQKIYEARVIKDALDRLAARFDTKNLPLSAEELQTLAKRAREAFRSEKKKDRLDRYKAHLASRYGEESVGPVSAALEEINNAIGYEEK*
Ga0137430_10701102	3300012041	Soil	MAFAMAAGARRLLGTFIWPLGTLMSWKAKHQKIYEARVVSDALGRLAKRFDLKTLPFSDEELQTLAKRARESFNAFRSEQKKAHLGKYKAHLASLYGEACVGPVWAALEEINNEIGYEEK
Ga0137336_10899081	3300012161	Soil	MSWKGKHHKIYEARVVSDALGRLAKRFDLKTLPFSDEELQTLAKRARESFNAFRSEEKKLRLGKYKAHLASLYGEACVGPVWAALEEINNEIGYEEK*
Ga0137327_10560812	3300012173	Soil	MNWKTEARKIYETRVVADSLAQLAKRFDLKSLPFSGEELQTLATRARQSFRSEKKREQLERYKARLAALYGEERVGAI
Ga0137338_10122801	3300012174	Soil	MSWKAQHHKIYEARVVADSLARLAKRFDLTTLPFSEEELQTLAKRARESFRAFGSEEKKERLARYKTHLSILYGETSVEPVWAALKEINNEIGYEEK*
Ga0137435_10007662	3300012232	Soil	MIRAMSWKSETLKAYEARVVADALARLAKQVDLKALPFSDDELRTLAKRAREFFTSENKRGRFDRFKAHLSARHGEEPVAAVAAALVVINNAIGYEEK*
Ga0137435_12655071	3300012232	Soil	MSWKAQHEKIYEARVVADSLARLAKRFDMTTLPFSAEELQTLAKRARESFRAFGSEEKKERLAKYKAHLSTLYGEASVGPVWAALGEINNEIGYEEK*
Ga0137413_110804021	3300012924	Vadose Zone Soil	DKIYEARVVADALARLALRFDLKSLPFSTGELQTLAARARESFKASPEQKAELARYKEHLSTLYGAPGVGRVWAALEQINNDIGYEEK*
Ga0137404_101547062	3300012929	Vadose Zone Soil	MSSNAEADKIYEARVVADALTRLALRFDLKSLPFSTEELQTLAERARASFKASPEQKAELARYKEHLSTLYGAPGVGRVWAALEQINNDIGYEEK*
Ga0126375_120065392	3300012948	Tropical Forest Soil	MSWKAEVHKIYEARVVRDALGRLAERLDLKNLPLSEEELQTLAKRARGAFRSEKKRERLDRYKAHLSTLYGEERVGTISAALEEINNAIGYEEK*
Ga0163162_118812281	3300013306	Switchgrass Rhizosphere	MSWKAQHEKIYEARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEHSVGPVWAALEEINNEIGYEEK*
Ga0181534_100951022	3300014168	Bog	MEKIAPNVVTEALARLAMRFDLKSLPFSKEELQTLAERAHESFGAPEVEKERLGQYKVHLATLYGEPGVGRIWAALEQINNEIGYEGK*
Ga0182017_100041392	3300014494	Fen	MSREAKAHRIYEARVVEDSLTRLATRLDLKSLPFSDEELQTLAKRARESFRAYRSEEKRERLSRYKTHLSALYGDACVEMAWVALEKINNEIGYEEK*
Ga0180088_10593571	3300014868	Soil	QKIYEARVIKDALDRLAARFDTKNLPLSAEELQTLAKRAREAFRSEKKKDRLDRYKAHLASRYGEESVGPVSAALEEINNAIGYEEK*
Ga0180089_10167622	3300015254	Soil	MSWKAQHHKIYEARVVADSLARLAKRFDLTTLPFSEEELQTLAKRARESFRAFGSEEKKERLARYKTHLSILYVETSVEPVWAALKEINNEIGYEEK*
Ga0180077_11451492	3300015255	Soil	MSWKAEHEKIYEARVVADSLARLAKRFDLTTLPFTSDELQTLAKRARESFRAHGSEEKKERLAKYKAHLSGLYGEASVGPVWAALGEINNEIGYEEK*
Ga0132258_115435293	3300015371	Arabidopsis Rhizosphere	MSWKAQHEKIYEARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEESVGPVWAALAAINNEIGYEEK*
Ga0132256_1006407392	3300015372	Arabidopsis Rhizosphere	MSWKAQHEKIYEARVVNDSLARLAKRFDLTTLPFSAEELRTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVGPVWAALEEINNEIGYEEK*
Ga0132255_1053115492	3300015374	Arabidopsis Rhizosphere	MSWKAQHEKIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVGPVWAALEEINNEIGYEEK*
Ga0163161_107708621	3300017792	Switchgrass Rhizosphere	MSREAQDRKIYEARIVADSLARLARRFDLTSLPFSKEELQTLAQRARKSFRAFGSEEKKERLARYKTHLSTLYGEASVEPVWSTLREINNEI
Ga0184634_100948602	3300018031	Groundwater Sediment	MSWKAEHQKIYEARVVTDALARLAKRFDLATLPFSAEELQTLATRARESFRAYGSDEKQQRLAGFRAHLAGLYGEESVGPVWAALVEINNEIGYEEK
Ga0184634_101970472	3300018031	Groundwater Sediment	MSWKAQHHKIYEARVVADSLARLAKRFDLTTLPFSEQELQTLAERARESFRAFGSEEKKERLARYKAHLSTLYGEASVGPVWAALGEINNEIGYEEK
Ga0184615_100122802	3300018059	Groundwater Sediment	MSWKAQHHKVYEARVLTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFRSEEKKERLARYKAHLSSLYGEESVGPVWAALEEINNEIGYEEK
Ga0184615_100171783	3300018059	Groundwater Sediment	MSWKAQHHKIYEARVVADSLARLAKRFDLTTLPFSEEELQTLAKRARESFRAFGSEEKKERLARYKTHLSILYGETSVEPVWAALKEINNEIGYEEK
Ga0184637_100258032	3300018063	Groundwater Sediment	MSWKAEASKIYEARVVTDALARLAKRFDLKTLPFSDEELQTLAERARQSFRAFRSEEKKERLGRYKVHLSTIYGEACVRPVWAALEQINNEIGYEEK
Ga0184637_103921891	3300018063	Groundwater Sediment	MSWKAQHHKIYEARVVADSLARLAKQFDLTTLPFSEEELQTLAKRARESFRAFGSEEKKERLARYKTHLSILYGETSVEPVWAALKEINNEIGYEEK
Ga0184635_100042934	3300018072	Groundwater Sediment	MSWEAEASKIYEARVVTDSLARLAKRFELKTLPFSDDELQALAKRARESFNAFRSEEKKERLGRYKAHLSTLYGETCVGPVWAALEEINNEIGYDEK
Ga0184612_100867311	3300018078	Groundwater Sediment	SKIYEARVVTDSLARLAKRFELKTLPFSDDELQALAKRARESFNAFRSEEKKERLGRYKAHLSTLYGETCVGPVWAALEEINNEIGYDEK
Ga0184627_100642933	3300018079	Groundwater Sediment	MSWKSEARKIYEARVVKDALDRLAGQFDFKNLPFSEDELQTLAKRARESFRSEKNRERLDRYKAHLTALHGPESVARISAALEQINNTIGYEEK
Ga0184639_102497323	3300018082	Groundwater Sediment	MSWKAQHQKIYEARVVADSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVGPVWAALEEINNEIGYDEK
Ga0184629_105870591	3300018084	Groundwater Sediment	MSWKAQHHKVYEARVLTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFRSEEKKERLARYKAHLASLYGEPSVGPVWAALEEINNEIGYEEK
Ga0187894_101484371	3300019360	Microbial Mat On Rocks	MSWKAQHQEIYEARVVTDSLARLAKRFDLATLPFSDEELQTLARRARESFLAYRSEEKKERLGKYKAHLSSLYGEERVGPVWAALEEINNEIGYEEK
Ga0163151_100429412	3300020057	Freshwater Microbial Mat	MSWKAEHHKIYEARVVTDALGRLAAQFDFKSLPFSEDELQTLAKRARESFQDRERKRERLEKYKAHLSATHGRESVERISAAIEDINNAIGYEEK
Ga0209109_102217932	3300025160	Soil	DYQWCALTPASRATLRARTRASRGHVRPLGTLMSWKGKHHKIYEARVVSDALGRLAKRFDLKTLPFSDEELQTLAKRARESFRAFGSEEKKERLGKYKAHLSSLYGEACVGPVWVALEEINNEIGYEEK
Ga0209108_102978692	3300025165	Soil	MSWKGKHHKIYEARVVSDALGRLAKRFDLKTLPFSDEELQTLAKRARESFRAFGSEEKKERLGKYKAHLSSLYGEACVGPVWVALEEINNEIGYEEK
Ga0207681_109900441	3300025923	Switchgrass Rhizosphere	MSWKAQHEKIYEARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFRSEEKKERLARYKAHLSSLYGEQSVGPVWAALEEINNEIGYEEK
Ga0207694_100006555	3300025924	Corn Rhizosphere	MSWKSEHDKTYEARVVRDSLARLATRLDLKSLPFSEAELQTLAKRARESFRAIRSPEKRERLASFRSHLSARYGEPSVGPVWAALEQINNEIGYEEK
Ga0207701_107375261	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	AAAKCVRTGNAQCACGGALAASNAMSREAQDRKIYEERIVADSLARLAKRIDLTSLPFSKEELQTLAERARKSFRAFGSEEKKERLARYKTHLSTLYGEASVEPVWLALREINNEIGYEE
Ga0207702_105251092	3300026078	Corn Rhizosphere	MSWKAEHQKIYEARVVTDALARLGKRFDLATLPFSAEELQTLATRARESFRAHGSEEKQQRLTGYRTHLAGLYGEERVGPVWAALVEINNEIGYEEK
Ga0207702_106077461	3300026078	Corn Rhizosphere	KTYEARVVRDSLARLATRLDLKSLPFSEAELQTLAKRARESFRAIRSPEKRERLASFRSHLSARYGEPSVGPVWAALEQINNEIGYEEK
Ga0255160_10767001	3300026457	Freshwater	MSWKAEHQKVYEARVVTDSLARLAKRVDLATLPFAGEELQTLAVRARESFRAHGSCEKQQRLARYRTHLAGLYGEESVEPVWAALVEINNEIGYEEK
Ga0208320_10018133	3300027362	Soil	MSWKAEAQKIYEARVIKDALDRLAARFDTKNLPLSAEELQTLAKRAREAFRSEKKKDRLDRYKAHLASRYGEESVGPVSAALEEINNAIGYEEK
Ga0208185_10037104	3300027533	Soil	MSWKAEHEKIYEARVVADSLARLAKRFDLTTLPFTSDELQTLAKRARESFRAHGSEEKKERLAKYKAHLSGLYGEASVGPVWGALEEINNEIGYEEK
Ga0208185_10138503	3300027533	Soil	MGWKAKHHKIYEASVVSDALGRLAKRFDLKTLPFSDEELQTLAKRARESFSAFGSEEKKQRLGKYKAHLSSLYGEACVGPVWAALEEINNEIGYEEK
Ga0209966_10913661	3300027695	Arabidopsis Thaliana Rhizosphere	MSWKSDANKIYEARVIQDGLDRLTQRVDTKNIPFSGEELHTLAKRSREAMWSEKKKDRLNRYKVHLAARYGEECVREISAALEEINNE
Ga0209811_104240702	3300027821	Surface Soil	MSWKAQHQRTYEARVVADSLARLAKRFDLTTLPLSDEELQTLARRARQSFRAFGSEEKKERLARYKAHLSSLYGEHSVDPVWAALEEINNEIGYEEK
Ga0209481_104589872	3300027880	Populus Rhizosphere	MSWKNEARKVYEARVVVDSLSRLAKRVDLKSLPFLDEELQTLARRARESFRSENKRERLDRYKAHLSSLYGEEHVAAISAALEDINNEIGYEEK
Ga0207428_100189624	3300027907	Populus Rhizosphere	MGWKGQHHKIYEATVVTESLARLAKQLDLTTLPFSDEELRTLAKRARESFNAFGSEEKKARLARYKAHLSSLYGEQSVGPVWSALEEINTQIGWEEK
Ga0207428_111856361	3300027907	Populus Rhizosphere	IYEAQVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVEPVWAALEEINNEIGYEEK
Ga0207428_112344161	3300027907	Populus Rhizosphere	HAMSWKAQHEKIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEHSVGPVWAALEEINNEIGYEEK
Ga0207428_112533711	3300027907	Populus Rhizosphere	RGGVLVSCCTPQARRACAATSVATSHAMSRKAEATKIYEARVVTDALARLAKRFDLKALPFSDEELQTLAKRARESFRAFRSEEKKERLGRYKAQLSTLYGEACVGPVWAALEQINNEIGYEEK
Ga0209382_105464142	3300027909	Populus Rhizosphere	MSWKAEAHKIYEARVVADALARLAKRFDLKSLPFSDNELHTLARRAREAFRSEKKKGRLNKYKAHLSSLYGEERVGPIAAALHKINNEIGYEEK
Ga0209382_117251721	3300027909	Populus Rhizosphere	MSWKAQHEKIYEARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYRAHLSSLYGEESVGPVWAALEEINNEIGYEEK
Ga0247749_10385751	3300027993	Soil	MSWKGEARKIYEKGVVEDSLARLAKRLDLKSLPFSDEELQTLAKRTRESFYGSEKKRERLERYKAHLSTLHGEEPVATISDALQHINSEIGYEEK
Ga0170834_1038250542	3300031057	Forest Soil	MSSNAEASKIYEARVVTDALARLAMRFDVRSLPLSDEELQTLAERTRESFGASGEKKEQLGKYKAHLTTLYGETCIGRVCAALEQINNEIGYEEK
Ga0310888_100349751	3300031538	Soil	MSWKAQHENIYEARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFRSEEKKERLARYKAHLSSLYGEQSVGPVWAALEEINNEIGYEEK
Ga0310887_102565812	3300031547	Soil	MSWKAQHEKIYEARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVEPVWAALEEINNEIGYEEK
Ga0310886_100597462	3300031562	Soil	MSWKAQHQKIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVEPVWAALEEINNEIGYEEK
Ga0247727_105166332	3300031576	Biofilm	MSWKTEARKIYEARVVADSLARLAKRFDLKSLPFSDEELQTLATRARESFRSEKKRERLDRYKAHLSTLYGEELVGTISAALQDINNEIGYEEK
Ga0310813_107793842	3300031716	Soil	MSGKAQHHKIYEARVVTDSLARLAKRLDLTILPFSEEELQTLAKRARESFRAFGSEEKKERLARYKTHLSSLYGEASVGPVWAALKEINNEIGYEEK
Ga0307473_111332561	3300031820	Hardwood Forest Soil	MSWKAEHHKVYEARVVTDSLARLAKRFDLTTLPFSHEELQTLAKRARQSFRAFGSEEKKERLARYKAYLATLHGEAIVGAVWAALEEINNEIGYEEK
Ga0310907_101115242	3300031847	Soil	EARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVEPVWAALEEINNEIGYEEK
Ga0306919_108988072	3300031879	Soil	VITDSLARLAKRFDLATLPFSGEELRTLATGARESFRAYGSDEKQRLAGYRTHLAGLYGDERVVPVWAALVEINNEIGYEEK
Ga0310885_100439661	3300031943	Soil	MSWKAQHENIYEARVVSDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVEPVWAALEEINNEIGYEEK
Ga0310906_111161841	3300032013	Soil	MSWKARDDKIYEARVVADSLVRLAKRFDLTSLPFSGEELQTLAKRARESFRAFRSEEKKKRLARYKAHLSGLYGEHSVGPVWAALEEINNEIGYEEK
Ga0310899_100538491	3300032017	Soil	KIYEARVVTDSLARLAKRFDLTTLPFSDEELQTLAKRARESFRAFGSEEKKERLARYKAHLSSLYGEQSVEPVWAALEEINNEIGYEEK
Ga0307471_1035418701	3300032180	Hardwood Forest Soil	MSWKTEARKIYETRVVADSLAQLAKRFDLKSLPFSDEELQTLATRARQSFRSGKMRVQLDRYKAHLAALYGEERVGTISAALEDINNAIGYEEK
Ga0214472_102332132	3300033407	Soil	MTLRERRSHAHFTADVRPLGTLMSWKGKHHKIYEARVVSDALGRLAKRFDLKTLPFSDEELQTLAKRARESFRAFGSEEKKERLGKYKAHLSSLYGEACVGPVWVALEEINNEIGYEEK
Ga0364946_093547_120_413	3300033815	Sediment	MSWKAQHRKIYEARILTDSLARLAKRFDLTTLPFSDEELQILAKRARESFRAYRSEEKKERLAKYKAHLSTLYGEECVAPVWAALQEINNEIGYEGK
Ga0364946_105086_368_628	3300033815	Sediment	KIYEARVVTDSLARLAKRFDLKDLTFSDEELQTLATRARESFRSEKKSERLNRYKAHLSSLYGEERVGTISTALHDINNAIGYEEK
Ga0364946_109301_193_486	3300033815	Sediment	MSWKAEANKIYEARVVADSLARLAKRFDLKTLPFSDGELQTLAKRARESFRAFGSDEKKERLGRYKAHLSTIYGEACVGSVWAALEEVNNEIGYEEK
Ga0364932_0099884_315_608	3300034177	Sediment	MSWKAKHHKIYEARVVSDALGRLAKRFDLKTLPFSDEELQTLAKRARESFSAFGSEEKKERLGKYKAHLSSLYGEACVGPVWVALEEINNEIGYEEK
Ga0364934_0249272_377_661	3300034178	Sediment	MSWKTEARKIYEARVVTDSLARLAKRFDLKDLTFSDEELQTLATRARESFRSEKKSERLNRYKAHLSSLYGEERVGTISTALHDINNAIGYEEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056728

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences