Metagenome / Metatranscriptome Family F056659

Basic Information
Family ID	F056659
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	91 residues
Representative Sequence	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRATTIHGALRLASRQDVRPSVVELLRAAAGSCPQLQLAHAS
Number of Associated Samples	104
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.23 %
% of genes near scaffold ends (potentially truncated)	41.61 %
% of genes from short scaffolds (< 2000 bps)	98.54 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Most Common Taxonomy
Group	Unclassified (53.285 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.898 % of family members)
Environment Ontology (ENVO)	Unclassified (27.737 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.876 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.58% β-sheet: 0.00% Coil/Unstructured: 50.42%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.95.1.1: Influenza virus matrix protein M1	d2z16a1	2z16	0.6519
a.243.1.2: YopR Core	d1z21a1	1z21	0.63911
b.82.2.3: Gab protein (hypothetical protein YgaT)	d2r6sa_	2r6s	0.61205
d.143.1.3: Inositol polyphosphate kinase (IPK)	d1w2fa_	1w2f	0.60458
c.69.1.14: Carboxylesterase/thioesterase 1	d1auoa_	1auo	0.59391

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF13561	adh_short_C2	61.31
PF00775	Dioxygenase_C	4.38
PF00338	Ribosomal_S10	1.46
PF00297	Ribosomal_L3	0.73
PF03947	Ribosomal_L2_C	0.73
PF00282	Pyridoxal_deC	0.73
PF01738	DLH	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.38
COG0051	Ribosomal protein S10	Translation, ribosomal structure and biogenesis [J]	1.46
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.73
COG0087	Ribosomal protein L3	Translation, ribosomal structure and biogenesis [J]	0.73
COG0090	Ribosomal protein L2	Translation, ribosomal structure and biogenesis [J]	0.73

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
All Organisms	root	All Organisms	46.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
cellular organisms	root	All Organisms → cellular organisms	46.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.49 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.73 %
Maricaulales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.19 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.73 %
Robiginitomaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae	0.73 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	5.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.19 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %
Hellea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Hellea	0.73 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
unclassified Mycobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae	3.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.19 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
unclassified Hellea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Hellea → unclassified Hellea	0.73 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.28 %
Mycobacteriaceae bacterium 1482268.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae → Mycobacteriaceae bacterium 1482268.1	3.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.19 %
Hellea sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Hellea → unclassified Hellea → Hellea sp.	0.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y01DL1RP	Not Available	673	Open in IMG/M
3300000956\|JGI10216J12902_106128235	All Organisms → cellular organisms → Bacteria → Proteobacteria	1267	Open in IMG/M
3300002568\|C688J35102_120045051	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300002568\|C688J35102_120478423	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300003989\|Ga0055473_10109546	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300004007\|Ga0055476_10105638	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300004081\|Ga0063454_100725387	Not Available	754	Open in IMG/M
3300004081\|Ga0063454_100834493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	718	Open in IMG/M
3300004157\|Ga0062590_102423339	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005181\|Ga0066678_10396045	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005327\|Ga0070658_11799895	Not Available	530	Open in IMG/M
3300005330\|Ga0070690_101059842	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005337\|Ga0070682_100101878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1897	Open in IMG/M
3300005355\|Ga0070671_101258931	Not Available	652	Open in IMG/M
3300005437\|Ga0070710_11469288	Not Available	511	Open in IMG/M
3300005438\|Ga0070701_10919463	Not Available	605	Open in IMG/M
3300005439\|Ga0070711_100130800	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300005456\|Ga0070678_100354576	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300005458\|Ga0070681_10833079	Not Available	840	Open in IMG/M
3300005459\|Ga0068867_102008187	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005466\|Ga0070685_10612197	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300005535\|Ga0070684_100796629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	883	Open in IMG/M
3300005548\|Ga0070665_101717417	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005548\|Ga0070665_102263605	Not Available	547	Open in IMG/M
3300005764\|Ga0066903_102207875	All Organisms → cellular organisms → Bacteria → Proteobacteria	1062	Open in IMG/M
3300005764\|Ga0066903_107221228	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005985\|Ga0081539_10069402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1897	Open in IMG/M
3300006057\|Ga0075026_100839969	Not Available	560	Open in IMG/M
3300006354\|Ga0075021_10520516	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300006354\|Ga0075021_10883935	Not Available	580	Open in IMG/M
3300006358\|Ga0068871_102423655	Not Available	500	Open in IMG/M
3300006871\|Ga0075434_100605253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1115	Open in IMG/M
3300007769\|Ga0102952_1053755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
3300009098\|Ga0105245_11976609	Not Available	636	Open in IMG/M
3300009098\|Ga0105245_12207654	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300009177\|Ga0105248_12826483	Not Available	554	Open in IMG/M
3300009545\|Ga0105237_11561284	Not Available	667	Open in IMG/M
3300009545\|Ga0105237_12609047	Not Available	516	Open in IMG/M
3300009553\|Ga0105249_12539907	Not Available	585	Open in IMG/M
3300009789\|Ga0126307_10062590	All Organisms → cellular organisms → Bacteria	2919	Open in IMG/M
3300009789\|Ga0126307_10136911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1957	Open in IMG/M
3300009840\|Ga0126313_11064872	Not Available	664	Open in IMG/M
3300009870\|Ga0131092_10394924	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300010045\|Ga0126311_11753309	Not Available	525	Open in IMG/M
3300010145\|Ga0126321_1330569	Not Available	508	Open in IMG/M
3300010147\|Ga0126319_1150272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	747	Open in IMG/M
3300010166\|Ga0126306_10274801	Not Available	1291	Open in IMG/M
3300010166\|Ga0126306_10376830	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300010371\|Ga0134125_11853062	Not Available	656	Open in IMG/M
3300010373\|Ga0134128_12833961	Not Available	534	Open in IMG/M
3300010400\|Ga0134122_12706938	Not Available	548	Open in IMG/M
3300011119\|Ga0105246_10505293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1027	Open in IMG/M
3300011332\|Ga0126317_10518768	Not Available	511	Open in IMG/M
3300011332\|Ga0126317_10530580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae → Mycobacteriaceae bacterium 1482268.1	560	Open in IMG/M
3300011332\|Ga0126317_10703355	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300012212\|Ga0150985_102455683	Not Available	548	Open in IMG/M
3300012212\|Ga0150985_106964294	Not Available	528	Open in IMG/M
3300012354\|Ga0137366_10526444	Not Available	852	Open in IMG/M
3300012469\|Ga0150984_100545256	Not Available	773	Open in IMG/M
3300012469\|Ga0150984_110984988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae → Mycobacteriaceae bacterium 1482268.1	525	Open in IMG/M
3300012469\|Ga0150984_112478400	Not Available	716	Open in IMG/M
3300012469\|Ga0150984_112481949	Not Available	595	Open in IMG/M
3300012469\|Ga0150984_119500720	Not Available	518	Open in IMG/M
3300012913\|Ga0157298_10319678	Not Available	558	Open in IMG/M
3300012951\|Ga0164300_10585441	Not Available	655	Open in IMG/M
3300012955\|Ga0164298_10342356	Not Available	943	Open in IMG/M
3300012960\|Ga0164301_10726299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300012960\|Ga0164301_11725008	Not Available	524	Open in IMG/M
3300012961\|Ga0164302_10667476	Not Available	765	Open in IMG/M
3300012984\|Ga0164309_10367848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300012987\|Ga0164307_10298228	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300012988\|Ga0164306_10190954	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300012988\|Ga0164306_11207985	Not Available	634	Open in IMG/M
3300012988\|Ga0164306_11811199	Not Available	530	Open in IMG/M
3300013296\|Ga0157374_12118411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300013308\|Ga0157375_11639325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300013308\|Ga0157375_11979832	Not Available	692	Open in IMG/M
3300014325\|Ga0163163_10313259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1623	Open in IMG/M
3300014325\|Ga0163163_11630410	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300014497\|Ga0182008_10918377	Not Available	516	Open in IMG/M
3300015192\|Ga0167646_1048371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	985	Open in IMG/M
3300015242\|Ga0137412_10626146	Not Available	811	Open in IMG/M
3300015371\|Ga0132258_13174688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1134	Open in IMG/M
3300015371\|Ga0132258_13480115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1079	Open in IMG/M
3300015373\|Ga0132257_104329292	Not Available	517	Open in IMG/M
3300016294\|Ga0182041_11325771	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300018469\|Ga0190270_10659393	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300018481\|Ga0190271_11981542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300020070\|Ga0206356_11016476	Not Available	508	Open in IMG/M
3300020078\|Ga0206352_10678960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae → Mycobacteriaceae bacterium 1482268.1	545	Open in IMG/M
3300021315\|Ga0179958_1024249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae → Mycobacteriaceae bacterium 1482268.1	541	Open in IMG/M
3300021478\|Ga0210402_11347949	Not Available	641	Open in IMG/M
3300021478\|Ga0210402_11704585	Not Available	557	Open in IMG/M
3300021560\|Ga0126371_11880486	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300022195\|Ga0222625_1555414	Not Available	553	Open in IMG/M
3300022195\|Ga0222625_1634487	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300022195\|Ga0222625_1641397	Not Available	507	Open in IMG/M
3300022467\|Ga0224712_10341067	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300025929\|Ga0207664_11426260	Not Available	613	Open in IMG/M
3300025972\|Ga0207668_10933043	Not Available	774	Open in IMG/M
3300026023\|Ga0207677_11961009	Not Available	544	Open in IMG/M
3300026078\|Ga0207702_11871203	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300026089\|Ga0207648_10515538	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300026121\|Ga0207683_11894635	Not Available	545	Open in IMG/M
3300026196\|Ga0209919_1175234	Not Available	599	Open in IMG/M
3300027894\|Ga0209068_10288102	Not Available	920	Open in IMG/M
3300028379\|Ga0268266_10205865	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300028592\|Ga0247822_11463535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	576	Open in IMG/M
3300028654\|Ga0265322_10191317	Not Available	586	Open in IMG/M
3300028802\|Ga0307503_10291376	Not Available	815	Open in IMG/M
3300028824\|Ga0307310_10673952	Not Available	530	Open in IMG/M
3300030114\|Ga0311333_10497887	Not Available	998	Open in IMG/M
3300030785\|Ga0102757_11096543	Not Available	504	Open in IMG/M
3300030829\|Ga0308203_1088391	Not Available	518	Open in IMG/M
3300030902\|Ga0308202_1022024	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300030902\|Ga0308202_1058739	Not Available	722	Open in IMG/M
3300030902\|Ga0308202_1105833	Not Available	586	Open in IMG/M
3300030902\|Ga0308202_1107113	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300030902\|Ga0308202_1140703	Not Available	530	Open in IMG/M
3300030903\|Ga0308206_1130979	Not Available	588	Open in IMG/M
3300031057\|Ga0170834_113921777	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031058\|Ga0308189_10515274	Not Available	517	Open in IMG/M
3300031092\|Ga0308204_10186210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Robiginitomaculaceae → Hellea → unclassified Hellea → Hellea sp.	639	Open in IMG/M
3300031092\|Ga0308204_10318699	Not Available	526	Open in IMG/M
3300031092\|Ga0308204_10341677	Not Available	513	Open in IMG/M
3300031092\|Ga0308204_10353664	Not Available	506	Open in IMG/M
3300031092\|Ga0308204_10364924	Not Available	500	Open in IMG/M
3300031093\|Ga0308197_10424296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae → Mycobacteriaceae bacterium 1482268.1	527	Open in IMG/M
3300031251\|Ga0265327_10005145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11097	Open in IMG/M
3300031366\|Ga0307506_10245531	Not Available	679	Open in IMG/M
3300031859\|Ga0318527_10527806	Not Available	504	Open in IMG/M
3300032180\|Ga0307471_103278724	Not Available	574	Open in IMG/M
3300032261\|Ga0306920_103010990	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300032782\|Ga0335082_10787812	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300034177\|Ga0364932_0408208	Not Available	512	Open in IMG/M
3300034195\|Ga0370501_0361279	Not Available	529	Open in IMG/M
3300034965\|Ga0370497_0055265	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.34%
Host-Associated	Host-Associated	29.20%
Engineered	Engineered	1.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.12%
Plants	Host-Associated → Plants	29.20%
Aquatic	Environmental → Aquatic	10.22%
Solid Waste	Engineered → Solid Waste	0.73%
Wastewater	Engineered → Wastewater	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.76%
Freshwater	Environmental → Aquatic → Freshwater	5.84%
Sediment	Environmental → Aquatic → Sediment	2.92%
Roots	Host-Associated → Plants → Roots	2.19%
Marine	Environmental → Aquatic → Marine	1.46%
Peat	Environmental → Terrestrial → Peat	0.73%
Floodplain	Environmental → Terrestrial → Floodplain	0.73%
Grass	Engineered → Solid Waste → Grass	0.73%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.07%
Loam	Environmental → Terrestrial → Soil → Loam	10.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.19%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.19%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.46%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.73%
Composting	Engineered → Solid Waste → Grass → Composting	0.73%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.84%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.19%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.19%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.73%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.73%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.38%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.19%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.19%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.46%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.73%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.73%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.73%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.73%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.73%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003989	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordA_D2	Environmental	Open in IMG/M
3300004007	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007769	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026196	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_01665860	2170459021	Switchgrass, Maize And Mischanthus Litter	MTQTGATMQVFSGSAITAEELLVLAEFAAPSHFVSSDHLREAADNLAEWTDHHPATIRRALRLASNQDVRSTVIDLLAAASQVSSGPTLARAS
JGI10216J12902_1061282352	3300000956	Soil	MTYETVQVYSGSPITPEELLVLAEFAAPSHFVSDEHLRDAADNLAEWTDHRSATIAGALRLAMRQDVRPSVVELLRAAVMMSSNLRLAHAS*
C688J35102_1200450512	3300002568	Soil	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRASTIHAALRLASRQDVRPSVVELLQAAAGTCPQLQLAYAS*
C688J35102_1204784232	3300002568	Soil	MSKGTMQVFSGSAITPEELLVLAEFASPSHFVSDDALRDAADNLAEWTDHEPSTIVAALHLASRRDVHPTVIQLLRAAAMSTDDDSLARAS*
Ga0055473_101095463	3300003989	Natural And Restored Wetlands	MSNETATMQVFSGSAITPEELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRSSTIIAALHLAARRDVHPTVIQLLRAARS
Ga0055476_101056382	3300004007	Natural And Restored Wetlands	MQVFSGSAITPEELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRSSTIIAALHLAARRDVHPTVIQLLRAARSDTDDSMFDLDEPMARAS*
Ga0063454_1007253871	3300004081	Soil	MTDRIPKVFSGSAITPEELLVLAEFAAPSHFITDGLRDEAAENLAQWTDHEAPTIVAALMLAHDRDVRPSVIELLCAAAALTAADPTAIALA
Ga0063454_1008344932	3300004081	Soil	MNTETMQVFSGSAITPEELLVLAEFAAPSHFVSDGHLHDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVIQLLRAAAMSTTDELVTAPVLRRAS*
Ga0062590_1024233391	3300004157	Soil	MSNGTMQVFSGSAITPDELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASYRDVHPTVVQLLRAAAMLST
Ga0066678_103960452	3300005181	Soil	MAYETVQVFSGSPITAEELLVLAEFAAPSHFVSDDHLRDAADNLADWTDHQSRTIAGALRLASRQDVRPSVIELLRAAAAVSPGLRLAHAS*
Ga0070658_117998952	3300005327	Corn Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRASTIAAALHLASRRDVHPTVVELLRAAAMLSTDEGYVGTTVDEHWARAS*
Ga0070690_1010598422	3300005330	Switchgrass Rhizosphere	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVVISTYAAAENLAEWTDHRATTIHGALRLASRQAVRPSVVELLQAAAGTCPQLQLAYAS*
Ga0070682_1001018782	3300005337	Corn Rhizosphere	MTHETVQVFSGSPITSEELLVLAEFAAPSHFVSSEHLRDAADNVAAWTDHRSGPIVGALRLASRRDVRPSVIELLRAAASMSSGLRLAHAS*
Ga0070671_1012589311	3300005355	Switchgrass Rhizosphere	SGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRATTIHGALRLASRQAVRPSVVELLRAAVGTCPQLQLAYAS*
Ga0070710_114692881	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TVQVFSGSPITSEELLVLAEFAAPSHFVSSEHLRDAADNVAAWTDHRSGPIVGALRLASRRDVRPSVIELLRAAASMSSGLRLAHAS*
Ga0070701_109194631	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASYRDVHPTVVQLLRAAAMLSTPEGHVDTFDDEHWARAS*
Ga0070711_1001308001	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PITSEELLVLAEFAAPSHFVSSEHLRDAADNVAAWTDHRSGPIVGALRLASRRDVRPSVIELLRAAASMSSGLRLAHAS*
Ga0070678_1003545762	3300005456	Miscanthus Rhizosphere	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRATTIHGALRLASRQDVRPSVVELLRAAAGSCPQLQLAHAS*
Ga0070681_108330791	3300005458	Corn Rhizosphere	AITPEELLVLAEFAAPSHFVSDEHLHDAADNLAEWTDHRAGTIHGALRLAARQQVRPSVLELLRAAAGMCPALQLARAS*
Ga0068867_1020081871	3300005459	Miscanthus Rhizosphere	AMSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASRRDVHPTVVQLLRAAAMLSTPDTFVGETVDKHWARAS*
Ga0070685_106121972	3300005466	Switchgrass Rhizosphere	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRATTIHGALRLASRQAVRPSVVELLQAAAGTCPQLQLAYAS*
Ga0070684_1007966292	3300005535	Corn Rhizosphere	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAADNLADWTDHRASTIHGALRLATRQQVRPSVVELLRAAANTCPGLQLARAS*
Ga0070665_1017174172	3300005548	Switchgrass Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDAMHDAAENLAEWTDHEASTIVAALHLAMHRHVHGTVVELLRAAVMASGAEPVAREPLARAS
Ga0070665_1022636052	3300005548	Switchgrass Rhizosphere	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRPTTIHGALRLASRQTVRPSVVELLQAAAGTCPQLQLAYAS*
Ga0066903_1022078752	3300005764	Tropical Forest Soil	MTDDTITVFSGSPITPEELLVIADFAAPSHFVSKEHLHTAAENVAEWTDHRAGTINAALGLAARRGARQSVVDLLVEARSA*
Ga0066903_1072212281	3300005764	Tropical Forest Soil	MTYETVQVFSGSPVTCEELLVLAEFAAPSHFVSDDHLRDAADNVAEWTDHRSATIVGALRLASRREVRPSVIALLREAASM
Ga0081539_100694022	3300005985	Tabebuia Heterophylla Rhizosphere	MNHETLQVFSGSPITPEELLVIADFAAPSHFVSKEHLHEAAENVAEWTDHRAGTINAALRLAERRGARRSVVDLLVEARAA*
Ga0075026_1008399691	3300006057	Watersheds	PEELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRSSTIVAALHLASRRDVHPTVIRLLRAATMSTTDEPLARALLEREAS*
Ga0075021_105205162	3300006354	Watersheds	MSNGTMQVFSESAITPEELLVLAEFAAPSHFVSDSALHDAADNLAEWTDHEVSTIVAALHLGVQRDVNPTAIQLLRAAAMSDTPVPLARAS*
Ga0075021_108839351	3300006354	Watersheds	MTATMQVFSGSAITPEELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRSSTIVAALHLASRRDVHPTVIRLLRAAT
Ga0068871_1024236551	3300006358	Miscanthus Rhizosphere	MTYETVQVFSGSPITSEELLVLAEFAAPSHFVSSEHLRDAADNVAAWTDHRSGPIVGALRLASRRDVRPSVIELLRAAASMSSGLRLAHAS*
Ga0075434_1006052532	3300006871	Populus Rhizosphere	MANETVQVFSGSPITSEELLVLAEFAAPSHFVSDEHRRDAADNLAEWTDHRSATIVGALRLASRQEVRPSVIELLREAASMSSGLRLAHAS*
Ga0102952_10537551	3300007769	Soil	MNDETLQVFAGSAIDPEELLVLAEFAAPSHFVSDEHLRDAAENLADWTDHHPTTIHDARRLATRRDVRSSVVELLEEAAAVSGGGIRGLRLARAS*
Ga0105245_119766092	3300009098	Miscanthus Rhizosphere	LTDPSVGNTDVNGSEEAMSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRASTIAAALHLASRRDVHPTVVQLLRAAAMLSTDEGYVGATVDEHWARAS*
Ga0105245_122076541	3300009098	Miscanthus Rhizosphere	MNNGTMQVFSGSAITPKELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRPSTIVAALHLASQRDVHPTVIQLLRAAAMSTRDESGS
Ga0105248_128264831	3300009177	Switchgrass Rhizosphere	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRATTIHGALRLASRQAVRPSVVELLRAAVGTCPQLQLAYAS*
Ga0105237_115612842	3300009545	Corn Rhizosphere	MTHETVQVFSGSPITSEELLVLAEFAAPSHFVSSEHLRDAADNVAAWTDHRSGPIVGALRLASRRDVRPSVIELLRA
Ga0105237_126090472	3300009545	Corn Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRASTIAAALHLASRRDVHPTVVELLRAAAMLSTDEG
Ga0105249_125399071	3300009553	Switchgrass Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASYRDVHPTVVQLLRAAAMLSTPEGHVDTFVDEAADEHWARAS*
Ga0126307_100625904	3300009789	Serpentine Soil	MSKGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADSLAEWTDHRSSTIAAALHLAAYRDVHPTVVELLRAAAMLSTPDTFEREAVDEHWARAS*
Ga0126307_101369111	3300009789	Serpentine Soil	SEAAMSKGTMQVFSGSAITPGELLVLAEFAAPSHFVSDRQLHDAADNLAEWTDHRPSTIVAALHLASHRGVHPTVIQLLRAAAMSSNDESSDTVESLRRAS*
Ga0126313_110648721	3300009840	Serpentine Soil	MSKGTMQVFSGSAITPEELLVLAEFAAPSHFVSDRQLHDAADNLAEWTDHRPSTIVAALHLASHRGVHPTVIQLLRAAAMSSNDESSDTVESLRRAS*
Ga0131092_103949242	3300009870	Activated Sludge	MSNGAMQVFSGSAITPEELLVLAEFAAPSHFVSDGQLRDAADNLAEWTDHRSSTIAAALHLATRRDVHPTVCQLLRAAAMLSTPEPFSVAASLPRAS*
Ga0126311_117533091	3300010045	Serpentine Soil	MSNATMQVFSGSAITPEELLVLAEFAAPSHFVSDRALHDAADNLAEWTDHRSSTIAAALHLAAYRDVHPTVVELLRAAAMLSTPDTFERDAVDEHWARA
Ga0126321_13305691	3300010145	Soil	EAVMTYETVEVFSGSPITPEELLVLAEFAAPSHFVSDDQLRDAADNLADWTDHRPATIAGALRLAARQDVRPSVVELLRMAASMTSGLRLAHAS*
Ga0126319_11502722	3300010147	Soil	MNTETMQVFSGSAITPEELLVLAEFAAPSHFVSDGQLNDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVIRLLRAAAMSTTDESVDPPVLRRAS*
Ga0126306_102748012	3300010166	Serpentine Soil	LIDLGVGNINVYARSEAIMSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDHLHDAADNLAEWTDHRPSTIVAALHLASRRDVHPTVIRLLRAAAMSTTDLSVARAS*
Ga0126306_103768301	3300010166	Serpentine Soil	SEEAMSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDRALHDAADNLAEWTDHRSSTIAAALHLAAYRDVHPTVVELLRAAAMLSTPDTFEREAVDEHWARAS*
Ga0134125_118530622	3300010371	Terrestrial Soil	MTYETVQVFSGAAVTFEELLVLAEFAAPSHFVSDEHLRDAADNLAEWTDHRSATIVGALRLASRQEVRPSVVELLRRAASVSSGLRLAHAS*
Ga0134128_128339612	3300010373	Terrestrial Soil	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDGQLHDAADNLAEWTDHRSSTIAAALHLASYRDVHPTVVQLLRAAAMSTTDELEPPTVLRRAS*
Ga0134122_127069381	3300010400	Terrestrial Soil	MQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASYRDVHPTVVQLLRAAAMLSTPEGHVDTFDDEHWARAS*
Ga0105246_105052932	3300011119	Miscanthus Rhizosphere	MNNGTMQVFSGSAITPKELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRSSTIVAALHLASQRDVHPTVIQLLRAAAMSTRDESPSDGSLARAS*
Ga0126317_105187682	3300011332	Soil	DETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLYDAAENLAEWTNHRASTIYGALRLASRQEVRPSVIDLLQAAAGTCPQLQLAYAS*
Ga0126317_105305801	3300011332	Soil	RRSEAAMNTETMQVFSGSAITPEELLVLAEFAAPSHFVSDGQLHDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVIQLLRAAAMSTTDELEPPTVLRRAS*
Ga0126317_107033551	3300011332	Soil	DETLQVFSGSAITPEELLVLAEFAAPSHFVSHEHLHDAAENLAEWTDHRVSTIHGALRLASRQDVRSSVVELLQAATDRCPQLQLAHAS*
Ga0150985_1024556831	3300012212	Avena Fatua Rhizosphere	EFAAPSHFVSDGHLHDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVTQLLRAAAMSTTDELVTAPVLRRAS*
Ga0150985_1069642942	3300012212	Avena Fatua Rhizosphere	VAMNDETLQVFSGSAITAEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRVGTIHAALRLASRQVVRASVVELLMAAAGTCPQLQLAHAS*
Ga0137366_105264442	3300012354	Vadose Zone Soil	MTYETVQVYSGSPITPEELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRSATIAGALRLAMRQDVRPSVVELLRAAVMMSSNLRLAHAS*
Ga0150984_1005452562	3300012469	Avena Fatua Rhizosphere	SVVMNDETLQVFSGSAITPDELLVLAEFAAPSHFVSDDHLRDAAENLADWTDHRVGTVRAALRLAARQEVRPSVIELLSAAAGVCPQLELAHAS*
Ga0150984_1109849882	3300012469	Avena Fatua Rhizosphere	ALPISEAVMSKGTMQVFSGSAITPEELLVLAEFASPSHFVSDDALRDAADNLAEWTDHEPSTIVAALHLASRRDVHPTVIQLLRAAAMSTDDDSLARAS*
Ga0150984_1124784002	3300012469	Avena Fatua Rhizosphere	MQVFSGSAITPEELLVLAEFAAPSHFVSDGHLHDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVIQLLRAAAMSTTDELVTAPVLRRVS*
Ga0150984_1124819491	3300012469	Avena Fatua Rhizosphere	MNTETMQVFSGSAITPEELLVLAEFAAPSHFVSDGQLHDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVIQLLRAAAMSTTDELVTAPVLRAS*
Ga0150984_1195007201	3300012469	Avena Fatua Rhizosphere	EVTMLYETVPVFTGSRVTSEELLAIAEFASPSHFVSDDHLRDAAHNLAEWTNHESAPFVDALRLASRKHVRASVIDLLRTAAWVSSGLQLAHAS*
Ga0157298_103196782	3300012913	Soil	ELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRASTIAAALHLASRRDVHPTVVELLRAAAMLSTDEGYVGAPVDEHWARAS*
Ga0164300_105854411	3300012951	Soil	MRSDREEDMNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRVSTIHGALRLASRQDVRASVVDLLQAAAGTCPQLQ
Ga0164298_103423562	3300012955	Soil	MTHETVQVFSVSAITSKNQLVLAEFAAPSHFVSDEHLRDAADNVAAWTHHRSAPILGALQLASRRDVRPSVIELLRAAASMSSGLRLAHAS*
Ga0164301_107262992	3300012960	Soil	MRSDREEDMNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRASTIHGALRLASRQDVRPRVVALLRAAAGSCPQLQLAHAS*
Ga0164301_117250081	3300012960	Soil	MNTETMQVFSGSAITPEELLVLAEFAAPSHFVSDDQLRDAADNLAEWTDHRSSTIVAALHLASRRDVHSSVIRLLRAAAMSTTDESIARAS*
Ga0164302_106674762	3300012961	Soil	MQVFSGTAITPEELLVLAEFAAPSHFVSDGQLHDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVIQLLRAAAMSTTDELVTVPVLRRAS*
Ga0164309_103678482	3300012984	Soil	MTHETVQVFSGSPITSEELLVLAEFAAPSHFVSSEHLRDAADNLAEWTDHQPATIVGALRLASRQEVRPSVIELLREAASMSSGLRLAHAS*
Ga0164307_102982282	3300012987	Soil	MNTETMQVFSGTAITPEELLVLAEFAAPSHFVSDGQLHDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVIQLLRAAAMSTTDELVTAPVLRRAS*
Ga0164306_101909542	3300012988	Soil	MTYETVQVFSGSRITSEELLVLAEFAAPSHFVSDDQLRDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVIQLLRAAAMSTTDELVTAPVLRRAS*
Ga0164306_112079852	3300012988	Soil	MAQMHATTMQVFSGSAITADELLVLAEFAAPSHFVSSDRLRDAAENLAEWTDHRVSTIHGALRLASRQDVRASVVDLLQAAAGTCPQLQLAHAS*
Ga0164306_118111991	3300012988	Soil	SGSRITSEELLVLAEFAAPSHFVSDGQLRDAADNLAEWTDHQPATIVGALRLASRQEVRPSVIELLREAASMSSGLRLAHAS*
Ga0157374_121184112	3300013296	Miscanthus Rhizosphere	MNNGTMQVFSGSAITPKELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRPSTIVAALHLASQRDVHPTVIQLLRAAAMSTRDESPSDGSLARAS*
Ga0157375_116393252	3300013308	Miscanthus Rhizosphere	MRSDREEDMNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRATTIHGALRLASRQDVRPSVVELLRAAAGSCPQLQLAHAS*
Ga0157375_119798321	3300013308	Miscanthus Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASYRDVHPTVVQLLRAA
Ga0163163_103132592	3300014325	Switchgrass Rhizosphere	MTNDSIQVFSGSAITPEELLVLAEFAAPSHFVSDDQLRDAADNLAEWTDHRASTIAAALHLASRRGVRASVTQLMRAAAMLSTDDRMARAS*
Ga0163163_116304102	3300014325	Switchgrass Rhizosphere	MDRPTFHDQTVDDRSFKVFSGSAITPEELLVIADFAAPSHFVSRGHLHDAADQLAEWTDHEPDTITAALRLASRRGARQSVVDLLVEARAA*
Ga0182008_109183771	3300014497	Rhizosphere	MNHDSLQVYSGSPITPEELLVIADFAAPSHFVSREHLHDAAENVAEWTDHRPGTINAALRLATRRGARPSVVALLVEARAA*
Ga0167646_10483712	3300015192	Glacier Forefield Soil	MTYETMQVYSGSPVTPEELLVLAEFAAPSHFVSSEHLHEAAENLAEWTDRESSIAERALRLAADRDERPSVVELLREAVDVARAA*
Ga0137412_106261462	3300015242	Vadose Zone Soil	MNTETMQVFSGSAITPEELLVLAEVAAPSHFVSDDQLRDAADNLAEWTNHRSSTIVAALHLASRRDVHSSVIRLLRAAAMSTTDESIARAS*
Ga0132258_131746882	3300015371	Arabidopsis Rhizosphere	MQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLAVHRDVHPTVVQLLRAAAMLSTNEGFAPAFVDEHADWARAS*
Ga0132258_134801152	3300015371	Arabidopsis Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALRLAARRDVHPTVFQLLRAAAMLSVDDGDVVATVDEHWARAS*
Ga0132257_1043292922	3300015373	Arabidopsis Rhizosphere	MSNETMQVFSGSAITPEELLVLAEFAAPSHFVSDGALRDAADNLAEWTDHRSSTIVAALHLASRRDVHPTVIRLLRAAAMSVTDEHVARAS*
Ga0182041_113257712	3300016294	Soil	MTEETMQVFSGSAITPEELLVLAEFAAPSHFLSDDHLHDAADNLAEWTNHQANAMYAALRLASRQDVRLSVLELLRDAASRCTGSLQLAHAS
Ga0190270_106593932	3300018469	Soil	MTYETVQVFTGSPITPEELLVLAEFAAPSHFVSDDHLRDAADNLADWTDHESATISGALRLASRQDVRPSVIALLRAAAALSSGGLQLAHAS
Ga0190271_119815422	3300018481	Soil	MTYETVQVFTGSPITPEELLVLAEFAAPSHFVSDDHLLDAAGNLADWTDHESAPISGALRLASRQGVRPSVIELLLAAANVSSGGLRLAHAS
Ga0206356_110164761	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASYRDVHPTVVQLLRAAAMLSTDEGYVGTTVDEHWARAS
Ga0206352_106789601	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MNTETMQVFSGTAITPEELLVLAEFAAPSHFVSDGQLHDAADNLAEWTDHRSSTIVAALHLASRRDVHPSVIQLLRAAAMSTTDELVTAPVLRRAS
Ga0179958_10242491	3300021315	Vadose Zone Soil	MTDGTMQVFSGSAITPEELLVLAEFAAPSHFITDDQLRNAADNLAEWTDHRSSTIVAALHLASRRDVHPTVIRLLRAAAMSSVDEPVARAS
Ga0210402_113479492	3300021478	Soil	MTHETVQVFAGTPVTPEELLVLAEFAAPSHFVSDEHLDEAAENLAEWTDHESATITAALRLAAHQDIRPSVTELLWAAATRCSGLRLAHAS
Ga0210402_117045852	3300021478	Soil	SGSPITSEELLVLAEFAAPSHFVSSEHLRDAADNVAAWTDHRSAPIVGALRLALRRDVRPSVIELLREAASMSSGLRLAHAS
Ga0126371_118804862	3300021560	Tropical Forest Soil	MTYETVHVFSGSPVTCEELLVLAEFAAPSHFVSDDHLRDAADNVAEWTDHRSATIVGALRLASRREVRPSVIALLREAASMTSGLRLAHVS
Ga0222625_15554141	3300022195	Groundwater Sediment	ELLVLAEFAAPSHFVSDQHLHDAAENLAEWTDRQSSIAERALRLAAGRDERPSVVELLREAVDVARAA
Ga0222625_16344871	3300022195	Groundwater Sediment	PITPQELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHESATIAGALRLASRQDVRPSVIELLRAAASVSGSLRLAHAS
Ga0222625_16413972	3300022195	Groundwater Sediment	EELLVLAEFAAPSHFVSDEHLRDAAANIAEWTEDGSTVIGGALRLAARRDVRPSVVELLRAAAALRPGLRLAHAS
Ga0224712_103410672	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VVMNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAADNLADWTDHRASTIHGALRLATRQQVRPSVVELLRAAANTCPGLQLARAS
Ga0207664_114262602	3300025929	Agricultural Soil	SEELLVLAEFAAPSHFVSSEHLRDAADNVAAWTDHRSGPIVGALRLASRRDVRPSVIELLRAAASMSSGLRLAHAS
Ga0207668_109330431	3300025972	Switchgrass Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRASTIAAALHLASRRDVHPTVVELLRAAAMLSTDEGYVGTTVDEHWARAS
Ga0207677_119610091	3300026023	Miscanthus Rhizosphere	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRATTIHGALRLASRQDVRPSVVELLRAAAGSCPQLQLAHAS
Ga0207702_118712031	3300026078	Corn Rhizosphere	MTYETVQVFSGSPITSKELLVLAEFAAPSHFVSSEHLRDAADNVAAWTDHRSGPIVGALRLASRRDVRPSVIELLRAAA
Ga0207648_105155382	3300026089	Miscanthus Rhizosphere	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASRRDVHPTVVQLLRAAAMLSTPDTFVGETVDKHWARAS
Ga0207683_118946351	3300026121	Miscanthus Rhizosphere	MNTETMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASRRDVHPTVVQLLRAAAMLSTPDTFVGETEKLFIATASADDATVPVTLTPL
Ga0209919_11752341	3300026196	Soil	MNDETLQVFAGSAIDPEELLVLAEFAAPSHFVSDEHLRDAAENLADWTDHHPTTIHDARRLATRRDVRSSVVELLEEAAAVSGG
Ga0209068_102881022	3300027894	Watersheds	MSNGTMQVFSESAITPEELLVLAEFAAPSHFVSDSALHDAADNLAEWTDHQPATIVGALRLASRQEVRPSVIELLREAASMSSGLRLAHAS
Ga0268266_102058652	3300028379	Switchgrass Rhizosphere	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRPTTIHGALRLASRQTVRPSVVELLQAAAGTCPQLQLAYAS
Ga0247822_114635352	3300028592	Soil	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALRDAADNLAEWTDHRSSTIAAALHLASYRDVHPTVVQLLRAAAMLSTPEGHVDTFVDEAADEHWARAS
Ga0265322_101913172	3300028654	Rhizosphere	MSNGEMQVFSGSAITPEELLVLAEFAAPSHFVSDGQLRDAADNLAEWTDHRSSTIVAALHLASRRDVHPTVTRLLRAAAMSTSADSVARAS
Ga0307503_102913761	3300028802	Soil	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRSSTIVAALHLASRRDVHPTVIQLLRA
Ga0307310_106739522	3300028824	Soil	MTYETVQVYSGSPITPEELLVLAEFAAPSHFVSDEHLCDAAANLAEWTERGSAVIAGALRLASLQDVRPSVVELLRAAAALRPGLHLAHAS
Ga0311333_104978871	3300030114	Fen	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHGAAENLAEWTDHRVGTVRAALRLASREDVRPSVIDLLRTAAGVCPQLQLAHAS
Ga0102757_110965432	3300030785	Soil	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALHDAADNLAEWTDHESSTISAALQLASRRRVHGAVIELLRTAATLTGDEYAHHATMARAS
Ga0308203_10883912	3300030829	Soil	NDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRPSTIHGALRLASREEVRASVVDLLQAAAGTCPQLQLAYAS
Ga0308202_10220242	3300030902	Soil	VMNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRPSTIHGALRLASREEVRASVVDLLQAAAGTCPQLQLAYAS
Ga0308202_10587392	3300030902	Soil	MTYETVQVYSGSPITPEELLVLAEFAAPSHFVSDEHLYDAAANLAEWTEHGSAVIAGALRLASYQDVRPSVVELLRAAAALRPGLHLAHAS
Ga0308202_11058331	3300030902	Soil	AMTYETVQVFSGSPITAEELLVLAEFAAPSHFVSAGHLHDAAQNLAEWTEDGSATIDGALRLAWMRAVRPSVIDLLRAAETLKPGLTLARAS
Ga0308202_11071131	3300030902	Soil	ELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRASTIHGALRLASRQEVRPSVVDLLCAAAGTCPQLQLAYAS
Ga0308202_11407032	3300030902	Soil	NDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRVNTIHGALRLASRQDVRASVVDLLQAAAGTCPQLQLAHAS
Ga0308206_11309792	3300030903	Soil	GKAMSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALFDAADNLAEWTDHRSSTIAAALHLAAYRDVHPTVVQLLRAAAMLSTPEGSVDTFVNEDWARAS
Ga0170834_1139217772	3300031057	Forest Soil	MNTETMQVFSGSAITAEELLVLAEFAAPSHFVSDDQLRDAADNLAEWTDHRSSTIVAALHLASRRDVHPTVIRLLRAAAMSTSDESVARAS
Ga0308189_105152742	3300031058	Soil	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRVSTIHDALRLASRQEVRPSVIDLLQAAAGTCPQLQLAHAS
Ga0308204_101862101	3300031092	Soil	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDALFDAADNLAEWTDHRSSTIAAALHLAAYRDVHPTVVQLLRAAAMLSTPEGSVDTFVNEHWARAS
Ga0308204_103186991	3300031092	Soil	MSNGTMQVFSGSAITPKELLVLAEFAAPSHFVSDDHLRDAAENIAEWTDHRPSTIVAALHLASQRDVHPSVIQLLRAAAMSTTDELVTAPVLRRAS
Ga0308204_103416771	3300031092	Soil	DETLQVFSGSAITPEELLVMAEFAAPSHFVSDEHLHDAAENLAEWTDHRPSTIHGALRLASREEVRASVVDLLQAAAGTCPQLQLAYAS
Ga0308204_103536641	3300031092	Soil	MTYETVQVFSGSPITAEELLVLAEFAAPSHFVSAGHLHDAAQNLAEWTEDGSATIDGALRLAWMRAVRPSVIDLLRAAETLKPGLTLARAS
Ga0308204_103649242	3300031092	Soil	VMTYETVQVYSGSPITPEELLVLAEFAAPSHFVSDEHLYDAAANLAEWTEHGSAVIAGALRLASYQDVRPSVVELLRAAAALRPGLHLAHAS
Ga0308197_104242961	3300031093	Soil	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLADWTDHRAGTVRAALRLASRQDVRPSVIELLSTAAGVCPQLELAHAS
Ga0265327_100051452	3300031251	Rhizosphere	MSNGEMQVFSGSAITPEELLVLAEFAAPSHFVSDGQLRDAADNLAEWTDHRSSTIVAALHLASRRGVHPTVTRLLRAAAMSTSADSVARAS
Ga0307506_102455311	3300031366	Soil	MSNGTMQVFSGSAITPEELLVLAEFAAPSHFVSDDHLRDAADNLAEWTDHRSSTIVAALHLASRRDVHPTVTRLLRAAAMFTTDESVARAS
Ga0318527_105278062	3300031859	Soil	MTYETVQVFSGSPVTCEELLVLAEFAAPSHFVSDDHLRDAADNVAEWTDHRSATIVGALRLASRRQVRPSVIALLREAAAMSSGLRLAHVS
Ga0307471_1032787242	3300032180	Hardwood Forest Soil	LLVLAEFAAPSHFVSSEHLRDAADNVAAWTDHRSGPIVGALRLASRRDVRPSVIELLRAAASMSSGLRLAHAS
Ga0306920_1030109901	3300032261	Soil	MTYETVQVFSGSPVTCEELLVLAEFAAPSHFVSDDHLRDAADNVAEWTDHRSATIVGALRLASRREVRPSVIALLREAASMSSGLRLAHVS
Ga0335082_107878122	3300032782	Soil	MTNETMQVFSGSAITPEELVVLAEFAAPSHFVSDDQLRDAADNLAEWTDHRARTIAAALHLASRRGGRASVIQLLRAAAMLSTDEPLRRAS
Ga0364932_0408208_173_448	3300034177	Sediment	MTYETVQVYSGSPITAEELLVLAEFAAPSYFVSDDHLHDAAENLAEWTENGSAAIHGALRLASVQDVRPSVVELLRTVATLRPGLTLAHAS
Ga0370501_0361279_2_235	3300034195	Untreated Peat Soil	TPEELLVLAEFAAPSHFVSDDQLRDAADNLAEWTDHRSSTIVAALHLASRRDVHPTVIRLLRAAAMSVRDESVARAS
Ga0370497_0055265_474_749	3300034965	Untreated Peat Soil	MNDETLQVFSGSAITPEELLVLAEFAAPSHFVSDEHLHDAAENLAEWTDHRVSTVQAALRLASRQDVRHSVVDLLRAAAGACPQLQLAHAS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056659

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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