Metagenome / Metatranscriptome Family F056591

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056591
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	47 residues
Representative Sequence	MRPCTRRIASAEEVIKATSLNDVLVEHAPWCRTAPNALLIHTKPL
Number of Associated Samples	98
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.67 %
% of genes near scaffold ends (potentially truncated)	67.15 %
% of genes from short scaffolds (< 2000 bps)	96.35 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (64.964 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (32.117 % of family members)
Environment Ontology (ENVO)	Unclassified (31.387 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.146 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.88% β-sheet: 0.00% Coil/Unstructured: 67.12%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00486	Trans_reg_C	5.84
PF01887	SAM_HAT_N	2.92
PF00285	Citrate_synt	2.92
PF00528	BPD_transp_1	2.19
PF00248	Aldo_ket_red	2.19
PF03100	CcmE	2.19
PF07883	Cupin_2	1.46
PF01935	DUF87	1.46
PF01370	Epimerase	1.46
PF00753	Lactamase_B	1.46
PF01272	GreA_GreB	1.46
PF13460	NAD_binding_10	1.46
PF04337	DUF480	1.46
PF02583	Trns_repr_metal	1.46
PF00903	Glyoxalase	1.46
PF00436	SSB	1.46
PF00475	IGPD	1.46
PF00196	GerE	1.46
PF01882	DUF58	1.46
PF02574	S-methyl_trans	0.73
PF00069	Pkinase	0.73
PF02074	Peptidase_M32	0.73
PF01208	URO-D	0.73
PF07676	PD40	0.73
PF03840	SecG	0.73
PF01128	IspD	0.73
PF12773	DZR	0.73
PF02811	PHP	0.73
PF13546	DDE_5	0.73
PF03144	GTP_EFTU_D2	0.73
PF00926	DHBP_synthase	0.73
PF00004	AAA	0.73
PF02518	HATPase_c	0.73
PF05544	Pro_racemase	0.73
PF00202	Aminotran_3	0.73
PF01988	VIT1	0.73
PF07690	MFS_1	0.73
PF13399	LytR_C	0.73
PF00575	S1	0.73
PF12710	HAD	0.73
PF13193	AMP-binding_C	0.73
PF06772	LtrA	0.73
PF01810	LysE	0.73
PF02515	CoA_transf_3	0.73
PF00702	Hydrolase	0.73
PF01522	Polysacc_deac_1	0.73
PF04227	Indigoidine_A	0.73
PF03976	PPK2	0.73
PF13561	adh_short_C2	0.73
PF03309	Pan_kinase	0.73
PF01121	CoaE	0.73
PF14240	YHYH	0.73
PF00682	HMGL-like	0.73
PF01475	FUR	0.73
PF00571	CBS	0.73
PF05977	MFS_3	0.73
PF10262	Rdx	0.73
PF00892	EamA	0.73
PF00156	Pribosyltran	0.73
PF00875	DNA_photolyase	0.73
PF01040	UbiA	0.73
PF04226	Transgly_assoc	0.73
PF00334	NDK	0.73
PF00270	DEAD	0.73
PF00676	E1_dh	0.73
PF13302	Acetyltransf_3	0.73
PF13396	PLDc_N	0.73
PF01351	RNase_HII	0.73
PF00355	Rieske	0.73
PF02272	DHHA1	0.73
PF01590	GAF	0.73
PF02803	Thiolase_C	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	2.92
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.92
COG0372	Citrate synthase	Energy production and conversion [C]	2.92
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	2.19
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.46
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	1.46
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	1.46
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	1.46
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.46
COG3132	Uncharacterized conserved protein YceH, UPF0502 family	Function unknown [S]	1.46
COG0131	Imidazoleglycerol phosphate dehydratase HisB	Amino acid transport and metabolism [E]	1.46
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.73
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.73
COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	Lipid transport and metabolism [I]	0.73
COG2317	Zn-dependent carboxypeptidase, M32 family	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG2313	Pseudouridine-5'-phosphate glycosidase (pseudoU degradation)	Nucleotide transport and metabolism [F]	0.73
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.73
COG2068	CTP:molybdopterin cytidylyltransferase MocA	Coenzyme transport and metabolism [H]	0.73
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.73
COG3938	Proline racemase/hydroxyproline epimerase	Amino acid transport and metabolism [E]	0.73
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.73
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.73
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.73
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	0.73
COG0164	Ribonuclease HII	Replication, recombination and repair [L]	0.73
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.73
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.73
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.73
COG0415	Deoxyribodipyrimidine photolyase	Replication, recombination and repair [L]	0.73
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	0.73
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.73
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.73
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.73
COG0746	Molybdopterin-guanine dinucleotide biosynthesis protein A	Coenzyme transport and metabolism [H]	0.73
COG1039	Ribonuclease HIII	Replication, recombination and repair [L]	0.73
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	0.73
COG1207	Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG0105	Nucleoside diphosphate kinase	Nucleotide transport and metabolism [F]	0.73
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	0.73
COG1521	Pantothenate kinase type III	Coenzyme transport and metabolism [H]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.96 %
Unclassified	root	N/A	35.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.96 %
Unclassified	root	N/A	35.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.96 %
Unclassified	root	N/A	35.04 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.72 %
Unclassified	root	N/A	35.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.73 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.61 %
Unclassified	root	N/A	35.04 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Kiritimatiellota	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota	0.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.90 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.19 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	2.19 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Kiritimatiellia	class	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia	0.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	16.79 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.46 %
Kiritimatiellales	order	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales	0.73 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.73 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.73 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.79 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.46 %
Pontiellaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Pontiellaceae	0.73 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.73 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.73 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.79 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.46 %
Pontiella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Pontiellaceae → Pontiella	0.73 %
unclassified Syntrophaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae	0.73 %
Marmoricola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola	0.73 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.79 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.46 %
unclassified Marmoricola	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola	0.73 %
Syntrophaceae bacterium PtaB.Bin038	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	0.73 %
Pontiella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Pontiellaceae → Pontiella	0.73 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.79 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.46 %
Marmoricola sp. URHB0036	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola → Marmoricola sp. URHB0036	0.73 %
Syntrophaceae bacterium PtaB.Bin038	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	0.73 %
Pontiella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Pontiellaceae → Pontiella	0.73 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005338\|Ga0068868_100252096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1486	Open in IMG/M
3300005365\|Ga0070688_100891989	Not Available	701	Open in IMG/M
3300005367\|Ga0070667_101792649	Not Available	578	Open in IMG/M
3300005456\|Ga0070678_100368477	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Kiritimatiellia → Kiritimatiellales → Pontiellaceae → Pontiella	1240	Open in IMG/M
3300005487\|Ga0074211_132943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	918	Open in IMG/M
3300005535\|Ga0070684_101893462	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005536\|Ga0070697_101449149	Not Available	613	Open in IMG/M
3300005543\|Ga0070672_100559221	Not Available	994	Open in IMG/M
3300005543\|Ga0070672_101054265	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300005547\|Ga0070693_101463289	Not Available	533	Open in IMG/M
3300005615\|Ga0070702_101699140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300005841\|Ga0068863_101619370	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006047\|Ga0075024_100484294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300006057\|Ga0075026_100977144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300006581\|Ga0074048_13055306	Not Available	669	Open in IMG/M
3300009120\|Ga0117941_1087602	Not Available	846	Open in IMG/M
3300009167\|Ga0113563_10739726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1107	Open in IMG/M
3300009177\|Ga0105248_11031228	Not Available	929	Open in IMG/M
3300009551\|Ga0105238_11116588	Not Available	811	Open in IMG/M
3300010147\|Ga0126319_1610848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300010403\|Ga0134123_12155855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300011119\|Ga0105246_12555633	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012212\|Ga0150985_116094669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300012895\|Ga0157309_10288500	Not Available	550	Open in IMG/M
3300012896\|Ga0157303_10317293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	504	Open in IMG/M
3300012903\|Ga0157289_10082074	Not Available	887	Open in IMG/M
3300012905\|Ga0157296_10166462	Not Available	674	Open in IMG/M
3300012906\|Ga0157295_10034680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1114	Open in IMG/M
3300012906\|Ga0157295_10358691	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012910\|Ga0157308_10379291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300012915\|Ga0157302_10070471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1037	Open in IMG/M
3300012955\|Ga0164298_10694055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300012955\|Ga0164298_11598446	Not Available	513	Open in IMG/M
3300012960\|Ga0164301_10766900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300012984\|Ga0164309_10123841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1676	Open in IMG/M
3300012984\|Ga0164309_10152690	Not Available	1537	Open in IMG/M
3300012984\|Ga0164309_10214975	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300012984\|Ga0164309_10518785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300012984\|Ga0164309_11935698	Not Available	505	Open in IMG/M
3300012985\|Ga0164308_10112339	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300012986\|Ga0164304_10430830	Not Available	945	Open in IMG/M
3300012986\|Ga0164304_11799975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300012987\|Ga0164307_10203569	Not Available	1349	Open in IMG/M
3300012988\|Ga0164306_11112454	Not Available	657	Open in IMG/M
3300013296\|Ga0157374_10875815	Not Available	915	Open in IMG/M
3300013296\|Ga0157374_11575123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300013308\|Ga0157375_12564088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300013308\|Ga0157375_12843240	Not Available	579	Open in IMG/M
3300014321\|Ga0075353_1156754	Not Available	579	Open in IMG/M
3300014322\|Ga0075355_1186613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300014325\|Ga0163163_11001009	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300014325\|Ga0163163_11469075	Not Available	743	Open in IMG/M
3300014325\|Ga0163163_12872399	All Organisms → cellular organisms → Bacteria → Terrabacteria group	537	Open in IMG/M
3300014325\|Ga0163163_13302506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300014325\|Ga0163163_13344889	All Organisms → cellular organisms → Bacteria → Terrabacteria group	500	Open in IMG/M
3300014326\|Ga0157380_11643437	Not Available	699	Open in IMG/M
3300014745\|Ga0157377_10987597	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300014969\|Ga0157376_10991101	Not Available	862	Open in IMG/M
3300014969\|Ga0157376_11397545	Not Available	731	Open in IMG/M
3300015374\|Ga0132255_104826576	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300017965\|Ga0190266_10431291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaB.Bin038	743	Open in IMG/M
3300017965\|Ga0190266_11190939	Not Available	527	Open in IMG/M
3300018083\|Ga0184628_10575994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300018083\|Ga0184628_10614282	Not Available	549	Open in IMG/M
3300018469\|Ga0190270_11463261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300018469\|Ga0190270_13030451	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300018476\|Ga0190274_10739741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1033	Open in IMG/M
3300018476\|Ga0190274_12405239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300018476\|Ga0190274_13647427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300018481\|Ga0190271_11679680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300018481\|Ga0190271_12125908	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300018481\|Ga0190271_13226700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300019361\|Ga0173482_10297405	Not Available	709	Open in IMG/M
3300019361\|Ga0173482_10509954	Not Available	586	Open in IMG/M
3300022549\|Ga0212091_10513379	Not Available	501	Open in IMG/M
3300022756\|Ga0222622_10332847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300022756\|Ga0222622_11456997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300022894\|Ga0247778_1094688	Not Available	790	Open in IMG/M
3300022906\|Ga0247766_1159405	All Organisms → cellular organisms → Bacteria → Terrabacteria group	588	Open in IMG/M
3300023169\|Ga0247762_1235912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300025901\|Ga0207688_10698433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300025909\|Ga0207705_10722120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300025919\|Ga0207657_10905001	Not Available	680	Open in IMG/M
3300025925\|Ga0207650_11306328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300025935\|Ga0207709_10425937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola → Marmoricola sp. URHB0036	1020	Open in IMG/M
3300025935\|Ga0207709_10771057	Not Available	774	Open in IMG/M
3300025940\|Ga0207691_10405238	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300025940\|Ga0207691_10508505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300025940\|Ga0207691_10813584	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300025940\|Ga0207691_10998547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300025961\|Ga0207712_11697121	Not Available	566	Open in IMG/M
3300026067\|Ga0207678_11949072	All Organisms → cellular organisms → Bacteria → Terrabacteria group	512	Open in IMG/M
3300026075\|Ga0207708_11654599	Not Available	562	Open in IMG/M
3300026088\|Ga0207641_12067550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300026121\|Ga0207683_10714059	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300026121\|Ga0207683_11024474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300027870\|Ga0209023_10620764	Not Available	632	Open in IMG/M
3300027897\|Ga0209254_10793420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300028710\|Ga0307322_10106864	Not Available	723	Open in IMG/M
3300028754\|Ga0307297_10154297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300028768\|Ga0307280_10248925	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300028790\|Ga0307283_10020976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1376	Open in IMG/M
3300028802\|Ga0307503_10015469	Not Available	2385	Open in IMG/M
3300028870\|Ga0302254_10027933	Not Available	1985	Open in IMG/M
3300028876\|Ga0307286_10205678	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300028876\|Ga0307286_10361025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300029987\|Ga0311334_10726023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300029990\|Ga0311336_10336842	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300030294\|Ga0311349_10858697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300030838\|Ga0311335_11187338	All Organisms → cellular organisms → Bacteria → Terrabacteria group	547	Open in IMG/M
3300030988\|Ga0308183_1104424	Not Available	650	Open in IMG/M
3300031058\|Ga0308189_10437026	Not Available	550	Open in IMG/M
3300031170\|Ga0307498_10253505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300031232\|Ga0302323_102067305	Not Available	647	Open in IMG/M
3300031232\|Ga0302323_102459524	Not Available	594	Open in IMG/M
3300031366\|Ga0307506_10114419	Not Available	903	Open in IMG/M
3300031873\|Ga0315297_11165110	Not Available	633	Open in IMG/M
3300031902\|Ga0302322_100619487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1275	Open in IMG/M
3300031918\|Ga0311367_10121673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2762	Open in IMG/M
3300031997\|Ga0315278_10324824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1590	Open in IMG/M
3300031997\|Ga0315278_10483611	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300031997\|Ga0315278_11080478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300031997\|Ga0315278_11362329	Not Available	688	Open in IMG/M
3300032018\|Ga0315272_10290896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300032143\|Ga0315292_11507886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300032156\|Ga0315295_12088906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300032163\|Ga0315281_10923461	All Organisms → cellular organisms → Bacteria → Terrabacteria group	891	Open in IMG/M
3300032164\|Ga0315283_10116611	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300032164\|Ga0315283_11192028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300032177\|Ga0315276_11962948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300032177\|Ga0315276_12622360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300032275\|Ga0315270_10064453	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300032397\|Ga0315287_10119868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3012	Open in IMG/M
3300032397\|Ga0315287_10760495	Not Available	1141	Open in IMG/M
3300032397\|Ga0315287_11316308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300032397\|Ga0315287_11735133	Not Available	697	Open in IMG/M
3300033480\|Ga0316620_11149259	All Organisms → cellular organisms → Bacteria → Terrabacteria group	760	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.53%
Host-Associated	Host-Associated	28.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.91%
Plants	Host-Associated → Plants	28.47%
Aquatic	Environmental → Aquatic	22.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.25%
Freshwater	Environmental → Aquatic → Freshwater	17.52%
Peat	Environmental → Terrestrial → Peat	6.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.57%
Sediment	Environmental → Aquatic → Sediment	5.11%
Roots	Host-Associated → Plants → Roots	3.65%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.19%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.58%
Lake	Environmental → Aquatic → Freshwater → Lake	13.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.22%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.11%
Loam	Environmental → Terrestrial → Soil → Loam	4.38%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.92%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.19%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.19%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.19%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.58%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.38%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.19%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.19%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	32.12%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.14%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	3.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.19%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.46%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.46%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.73%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.73%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.73%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.73%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.73%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.73%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005487	Sediment microbial communities from Lake Washington, Seattle, Washington, USA - Methanol enrichment	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022549	Cold Creek_combined assembly	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300022906	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L223-509R-6	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068868_1002520962	3300005338	Miscanthus Rhizosphere	MRPCTRRIVPAEGIIKATSLNDALGEHAPWCMTAPNALLIHIKPLVTRRRVRYRQSY*
Ga0070688_1008919891	3300005365	Switchgrass Rhizosphere	MRPSTRRIVPAEDVIKATSLNDVLGEHAPWCMTAPNALLIHIKPLVTGRRVRYRQSY*
Ga0070667_1017926492	3300005367	Switchgrass Rhizosphere	MRPCTLRIASAEKIIKATSLDDLLVEHAPWCRTTPNAPLLHTKPLNLPP*
Ga0070678_1003684772	3300005456	Miscanthus Rhizosphere	MRLGARRIAPAVEIIAATSLDDLLVEGAPWCRTAPDAPLVHIEPLGS*
Ga0074211_1329432	3300005487	Sediment	MRPCTLRIAPAEDDPKATSLTGXLVEHAPWCRTGPNALLLRIKPLD
Ga0070684_1018934622	3300005535	Corn Rhizosphere	MRPCTLRIVPAEDIIKATSLKDALGEHAPWCMTAPDAPLLHIKPLEVVPHGPRSA*
Ga0070697_1014491491	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRPCTRRIAPAEKIIKATSLNDLLVEHAPWCRTTPDALPIHIKPLSRYPRPT*
Ga0070672_1005592212	3300005543	Miscanthus Rhizosphere	MRPCTLRIASAETIIKATSLNDLLVEHAPWCRTAPDALP
Ga0070672_1010542651	3300005543	Miscanthus Rhizosphere	MRPCTLRIVSAEKIIKATSLDDLLVEHAPWCRTAP
Ga0070693_1014632892	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	HVWMRPCTRRIASAEDVIKATSLNDVLVEHAPWCRTAPNALLIHSKPLSMA*
Ga0070702_1016991401	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRPCTRRIAPAEIDIKATSLDADLVERAPWCRTAPDALRFTSSL*
Ga0068863_1016193702	3300005841	Switchgrass Rhizosphere	MRPCTLRIASAEKIIKATSLDDLLDEHAPWCRTTPNAPPLHTKPLALHQCRAKLR*
Ga0075024_1004842942	3300006047	Watersheds	MRPCTLRIASAEKIIKATSLDDLLVEHAPWCRTAPDALLIHIKPLAQVAVIHAS*
Ga0075026_1009771442	3300006057	Watersheds	RPCTRRIAPAEVDIKATSIDADLGERAPWCRTAPDALNFTSSL*
Ga0074048_130553061	3300006581	Soil	MRPCTRRIASAEKIIKATSLDDLLVEHAPWCRTAPNAPLMHTKPLD*
Ga0117941_10876021	3300009120	Lake Sediment	MRLCTLRIASAADGIEATSLDAARVEHAPWCRTAP
Ga0113563_107397261	3300009167	Freshwater Wetlands	MRPCTLRIASAEDDAKATSLTAALVEHAPWCRTAPNA
Ga0105248_110312282	3300009177	Switchgrass Rhizosphere	MRPCTRRIVPAEGIIEATSLNDALGEHAPWCRTAPNA
Ga0105238_111165882	3300009551	Corn Rhizosphere	MRPCTRRIASAEKIIKATSLDDLLVEHAPWCRATPAT
Ga0126319_16108482	3300010147	Soil	MRLCTLRIVPAEDDIKATSLDAARVEHAPWCRTAPDALHFTSSLKRRTLSP*
Ga0134123_121558551	3300010403	Terrestrial Soil	MRPCTRRIASAEDIIKATSLHDVLGEHAPWCRTAPD
Ga0105246_125556332	3300011119	Miscanthus Rhizosphere	MRPCTLRIVLAEDIIKATSLDDVLVEHAPWCMTAPNALPIHI
Ga0150985_1160946692	3300012212	Avena Fatua Rhizosphere	MRPCTRRIASADYIIKATSLDAIHVEHAPWCMTTRNALPTH
Ga0157309_102885001	3300012895	Soil	MRPSTRRIASAEDVFKATSLNDALVEHAPWCRTTPNAPLIRIKPLGSSHRSRA
Ga0157303_103172932	3300012896	Soil	MDQQHVWMRPCTRRIVPAVEVIKATSLNDLLIEHAPWCMTAPDALPVHIKPL*
Ga0157289_100820741	3300012903	Soil	MRPCTRWIVPAEEVIKATSLNDALGEHARWCMTAPNALLIHIKPLVTGRRVRYRQSY*
Ga0157296_101664622	3300012905	Soil	MRPCTLRIVLAEDIIKATSLDDVLVEHAPWCMTAPNALLIHIKL*
Ga0157295_100346802	3300012906	Soil	VKLEHARMRPCTLRIAPAEIDIKATSLDADLVERAPWCRTAPDALRFTSSL*
Ga0157295_103586912	3300012906	Soil	MRPCTRRIASAENIIKATSLDDVLVEHAPWCRAAPA
Ga0157308_103792912	3300012910	Soil	MRPCTRRIVPAEGIMKATSLNDALGEHAPWCMTAPNALLTHTKPP
Ga0157302_100704713	3300012915	Soil	MRPCTRRIVPAEKIIKATSLTDLLVEQAPLCMTAPATLPTPINPP
Ga0164298_106940552	3300012955	Soil	MRPCTRRIMSAADAIKATSLDAARVEHAPWCMTAPDALPAH
Ga0164298_115984462	3300012955	Soil	MRPCTRRIVPAEGTIKATSLNDALREHAPWCRTAPNALLTHTKPLGLRDDGTLHRLRAR
Ga0164301_107669001	3300012960	Soil	VPAEGTIKATSLNDALGEHAPWFRTAPNALPIHTKPLVAGVVVRRGGAQD
Ga0164309_101238411	3300012984	Soil	MRPCTRRIASAEDVIKATSLNDDLVEHAPWCRTAPNAPLIHIKPLGGGSRRGR
Ga0164309_101526901	3300012984	Soil	MRPCTLRIVSAEEVIKATSLNDVLVEHAPWCRTAPN
Ga0164309_102149752	3300012984	Soil	MRPCTRRIVPAEGIIKATSLNDALGEHAPWRMTAPNALLIHIKPLVTGRRVRYRQSY*
Ga0164309_105187851	3300012984	Soil	MRPCTLRIASAEKIIKATSLDDLLVKRAPWCMTAPAT
Ga0164309_119356982	3300012984	Soil	MRLCTLRIAPAEVDIEATGLDADLVERARWCRTAP
Ga0164308_101123394	3300012985	Soil	MRPCTLRIVSAEEVIKATSLNDVLVEHAPWCRTAPNALLIHTKPL*
Ga0164304_104308302	3300012986	Soil	MRPCTRRIVPAEGIIKATSLNDALGEHASWCMTAPNALLIHIKPLVTGRRVRYRQSY*
Ga0164304_117999752	3300012986	Soil	MRPCTRRIASAEDDTKATSLAVALVEHAPWCRTAPNALLIHIKPLRLR*
Ga0164307_102035691	3300012987	Soil	MRPCTRRIVPAEGIIKATSLNDALGEHAPWCMTAPNALLIHIKPLVTGRRVRYRQSY*
Ga0164306_111124541	3300012988	Soil	MRPCALRIASAEKIIKATSLSDLLVEHAPWCRTTPNAPLIRIKPLASATAACGC
Ga0157374_108758151	3300013296	Miscanthus Rhizosphere	MRPCTRRIASAEKVIKATSLNDLLVEHAPWCRTTPNALQIHIKPLDL
Ga0157374_115751232	3300013296	Miscanthus Rhizosphere	MRPCTLRIAPAEIDIKATSLDADLVERAPWCRTAPDALHFTSSL*
Ga0157375_125640882	3300013308	Miscanthus Rhizosphere	MRPCTLRIASAEKIIKATSLDDLLVEHAPWCRTAPDALPT
Ga0157375_128432401	3300013308	Miscanthus Rhizosphere	TRRIVSAEGIIKATSLNDALVEHAPWCRTAPNALLIHSKPLSMA*
Ga0075353_11567542	3300014321	Natural And Restored Wetlands	CTRRIASAEEDIKATSLDVLLGEHAPWCRTTPAALLIRIKPQGPDACKGTMLR*
Ga0075355_11866132	3300014322	Natural And Restored Wetlands	MRLCTLRIASAEEIIEATSLDDLLVEHAPWCRTTPAAPLLHIKP*
Ga0163163_110010092	3300014325	Switchgrass Rhizosphere	MRLCTLRIAPAEVDIEVTSLDADLVERAPWCRTAPDTLHFRSSPSPGCR*
Ga0163163_114690751	3300014325	Switchgrass Rhizosphere	MRPCTRRIVPAEGIIKATSLNDALVEHAPWCRTAPNAL
Ga0163163_128723992	3300014325	Switchgrass Rhizosphere	MRPCTLRIASAEDIIKATSLNDVLVEHAPWCRTAPNA
Ga0163163_133025061	3300014325	Switchgrass Rhizosphere	MRPCTRRIAPAEEIIKATSLDDLLVEHAPWCRTPQPDP*
Ga0163163_133448892	3300014325	Switchgrass Rhizosphere	MRPCTRRIVPAEDIIKATSLNDLLVEHAPWCRTAPNALLIHTKPPAGQGATVGS*
Ga0157380_116434371	3300014326	Switchgrass Rhizosphere	PRTRRIASAEDVIKATSLNDILVEHAPWFRTTPNAPLIHTNSL*
Ga0157377_109875972	3300014745	Miscanthus Rhizosphere	MRPCTLRIASAEIIIKETSLDDVLVEHAPWCMTTPDAPLR
Ga0157376_109911011	3300014969	Miscanthus Rhizosphere	MRTCTRRIASVEEVIKATSLDDLLGEHAPWCRTAPNAPLMHTKPLD*
Ga0157376_113975454	3300014969	Miscanthus Rhizosphere	MRPGNRRILPAENGIKATGLTDVLGEHAPWCRTAPNALL
Ga0132255_1048265762	3300015374	Arabidopsis Rhizosphere	MRPCTRRIVPAEEVIKATSLNDVLVEHAPWCRTTPDALPIPTDPLTV*
Ga0190266_104312911	3300017965	Soil	MRPCTRRIAPAEIDIKATSLDADLVERSPWCRTASNALHFSSSLSRLRAMSQ
Ga0190266_111909391	3300017965	Soil	MRPCTRRIVPAKHVIKATSINDGLVEHTPWCRTAPDAPLLHTKPLGFAPCQFT
Ga0184628_105759942	3300018083	Groundwater Sediment	MRPCTRRIVPAEEVIKATSLNDVLVEHAPWCMTAPNALPIHIKPLSFW
Ga0184628_106142822	3300018083	Groundwater Sediment	RPCTLRIASAEKIIKATSLYDLLVEHAPWCRTTPNALLIPIKPPEDT
Ga0190270_114632611	3300018469	Soil	MRPCTRRIVPAENVIKATSLNDVLGEHAPWCRCAPNALLMRIKPLGRSDVAPEVHR
Ga0190270_130304512	3300018469	Soil	MGACTRRIASAAASIKATSLDAARVEHAPWCRPSPDAL
Ga0190274_107397412	3300018476	Soil	MRPCTRRIVPAEDVIKATSLNDVLGEHAPWCMTAPNALLIHIKPLDA
Ga0190274_124052392	3300018476	Soil	MRPCTRRIVPAEGIIKATSLNDALVEHAPWRRTAPNALPIHIKPLGDTMEKTV
Ga0190274_136474271	3300018476	Soil	MRPCTLRFASAEKIIKATSLDDLLVEHAPWCRTAPAALPTR
Ga0190271_116796802	3300018481	Soil	MRPCTRRIASAEEVIKATSLDDVLVEHAPWCRTAPAALLIHGKPLGMA
Ga0190271_121259082	3300018481	Soil	MRPCTLRFASAEKIIKATSLDDLLVEHAPWCRTAPATLLIHIKPPSLQVE
Ga0190271_132267001	3300018481	Soil	MRPCTRRIASAEDVIKATSLNDLLVEHAPWCRPAPNALPIHTKPLIFVRPDAG
Ga0173482_102974052	3300019361	Soil	MRPCTLRIVLAEGIIKATSLDDVLVEHAPWCMTAPNALLIHIKPLVTGRRVRYRQSY
Ga0173482_105099541	3300019361	Soil	MRPCTRRIVLAEDIIKATSLDDVLVEHAPWCMTAPNALPIHIKPLRIGR
Ga0212091_105133792	3300022549	Groundwater	TRRIASAEGDIKATGLAAALVEHAPWCRAAPVALPIHIKPLA
Ga0222622_103328473	3300022756	Groundwater Sediment	PCTRRIATAEEVIKATSLDDLLVEHAPWCRTAPATLPIKTKPLQSSA
Ga0222622_114569972	3300022756	Groundwater Sediment	MQPCTRRIVSAEGIIKATSLHDALDEHAPWCRTAPTALPIHIKPLEDRLQPVVRVPSD
Ga0247778_10946882	3300022894	Plant Litter	MRPCTRRIVPAEGIIKATGLNDALGEHAPWCRTAPNALLIHIKPLVTGRRVRYRQSY
Ga0247766_11594052	3300022906	Plant Litter	MRPCTRRIVPAVEVIKATSLNDLLVEHAPWCRTTPNALPVHIKPPAGQGATVAW
Ga0247762_12359121	3300023169	Plant Litter	MRPCTRRIVPAEGIIKATSLNDALGEHAPWCMTAPNALLIHIKPLVTGRRVRYRQSY
Ga0207688_106984332	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRPCTRRIASAEEVIKATSLDDVLVEHAPWCRTAPAAPLIHTKPLRVEA
Ga0207705_107221201	3300025909	Corn Rhizosphere	VSQKHVWMRPCTRRIVPAEGTIKATSLNDALVEHAPWCMTAPNALLTRTKPPAT
Ga0207657_109050012	3300025919	Corn Rhizosphere	MRPCTRRIVPAEGIIKATSLNDALVEHAPWCRTAPNALLIHIKPLVTGRRVRYRQSY
Ga0207650_113063281	3300025925	Switchgrass Rhizosphere	MRPCTRRIASAEEVIKATSLNDLLVEHAPWCRTAPNAPLIPIKALDA
Ga0207709_104259371	3300025935	Miscanthus Rhizosphere	MRPCTLRIVPAEKIIEATSLDDLLVEHAPWCRTTPKAPLNTH
Ga0207709_107710572	3300025935	Miscanthus Rhizosphere	MRPCTRRIVPAEKVVKATSLNDSLGEHAPWSHTKP
Ga0207691_104052381	3300025940	Miscanthus Rhizosphere	MRPCTRRIASAEKVIKATSLDDLLVEHAPWCRTTPAALPTHIKPLVSLR
Ga0207691_105085052	3300025940	Miscanthus Rhizosphere	VKLEHARMRPCTLRIAPAEIDIKATSLDADLVERAPWCRAAPDALRFTSSL
Ga0207691_108135841	3300025940	Miscanthus Rhizosphere	MRPCTLRIVSAEKIIKATSLDDLLVEHAPWCRTAPVALPIHT
Ga0207691_109985472	3300025940	Miscanthus Rhizosphere	MRPCTGRIVPAEGIIKATSLNDALVEHAPWRRTAPNALPIHIKPLGDTMEKTVIRTEN
Ga0207712_116971211	3300025961	Switchgrass Rhizosphere	HVWMRPCTRRIMSAADAIKATSLDAARVEHAPWCMTAPDALPAHTKSPR
Ga0207678_119490722	3300026067	Corn Rhizosphere	MRPCTLRIVPAEDVIKATSLNNVLVEHAPWCRTAPNA
Ga0207708_116545991	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRPCTRRIVPAEGIIKATSLNDALVEHAPWRRTAPNALPIHIKPLGDTME
Ga0207641_120675501	3300026088	Switchgrass Rhizosphere	MRPCTLRIASAEKIIKATSLDDLLVEHAPWCRTTPGTLLVRIKPLAPSQHGTLRPWT
Ga0207683_107140592	3300026121	Miscanthus Rhizosphere	MRLGARRIAPAVEIIAATSLDDLLVEGAPWCRTAPDAPLVHIEPLGS
Ga0207683_110244742	3300026121	Miscanthus Rhizosphere	MRPCTRRIAPAEKIVKATSLDDLLVERAPWCRTAPDALRFQTEPLNSTT
Ga0209023_106207641	3300027870	Freshwater And Sediment	MRPCTLWIAPAEDDPKATSLTAALVEHAPWCRTAPNALLIRIKPLDGRR
Ga0209254_107934202	3300027897	Freshwater Lake Sediment	MRPCTLRIAFAEDDSKATSLAAALGEHAPWCRTTPAALPIHIKPLLMEERRLGPVVG
Ga0307322_101068641	3300028710	Soil	MRPCTLRIASAERVIKATSLDDLLVEHAPWCRTAP
Ga0307297_101542971	3300028754	Soil	MRPCTRRIASAEDVIKATSLNDVLVEHAPWCRTAP
Ga0307280_102489252	3300028768	Soil	MRPCTLRIVPAEGVVKATSLDDALGEHAPWCRTAPNALPIRIKPLGSTMDINGRTF
Ga0307283_100209762	3300028790	Soil	MRPCTRRIASAEEVIKATSLNDVLVEHAPWCRTAPNALLIHTKPL
Ga0307503_100154691	3300028802	Soil	GHLEHVWMRPCTRRIAPAENTIKAASLNDVLGEHAPWCRTAPNALLMPISL
Ga0302254_100279335	3300028870	Fen	RRIASAEEIIKATSLDDLLGEHAPWCRTTPDALLIHIKPLEDTT
Ga0307286_102056782	3300028876	Soil	MRPCTLRIAPAEIDIKATSLDADLVERAPWCRTAPDALHFTSSL
Ga0307286_103610251	3300028876	Soil	MRPCTRRIVPAEEIIKATSLNDLLVEHAPWCRTAPNAPLIPIKPLDADTADQDVL
Ga0311334_107260231	3300029987	Fen	MRLCTLRIASAEDDIKATSLHDVLVEHAPWCRTAPDAPLIHIK
Ga0311336_103368422	3300029990	Fen	MQPCTLRIASAEDIIKATSLDDVLVEHAPWCKTAQDALPSHTKPQAGEVRLLRS
Ga0311349_108586973	3300030294	Fen	MRPCTLRIASVEDDTKATSLPDVLVEHAPWCRTAPDAPLIHIKPL
Ga0311335_111873382	3300030838	Fen	MRPCTPRIAPAEMIIKATSLDDLLVERAPWRRTTPAALQIHIKPLALQASG
Ga0308183_11044241	3300030988	Soil	VGWKHVWMRPCTRRTVSAEVVIKAASLNDVLVEHAPWCRTAPNALLIHIKPLGS
Ga0308189_104370262	3300031058	Soil	VGWKHVWMRPCTLRIASAENIIKATSLNHVLVEHAPWCMTTPNALPTH
Ga0307498_102535052	3300031170	Soil	MRPCTLRIASAEKIIKATSLDDLLVEHAPWCRTAPAALLIHIKPLAGEELEQERV
Ga0302323_1020673053	3300031232	Fen	MRPGTRRIAPAEVGVKAISLATDLGERAPWCRVALDALRFAPSL
Ga0302323_1024595241	3300031232	Fen	MRPCTLRIASVEDDTKATSLPDVLVEHAPWCRTAPDAPLIHIKPLETLEARSRPEPEEP
Ga0307506_101144191	3300031366	Soil	MRPCTRRIASAEDVVKAGCLDDVLGEHAPWCMTATNAPLIPIKPPTRT
Ga0315297_111651102	3300031873	Sediment	MRPCTLRIASADDDAKATSLDPVLVEHAPWCRTAPAALPIHIK
Ga0302322_1006194873	3300031902	Fen	MRRCTLRIASAEKIIKATSLDDLLVEYAPWCRTAPNALLIHIKPLSRYPRRT
Ga0311367_101216733	3300031918	Fen	MRPCTLRIASAEKIIKATSLDDLLVEHAPWCRTAPNALPMHIKPLGLEQPAG
Ga0315278_103248241	3300031997	Sediment	MRPCTLRIASAEDDPKATSLTAALVEHAPWCRTAPATLLTRIKPLDISPEV
Ga0315278_104836113	3300031997	Sediment	CTLQIAPAEDDPKATSLTAALGEHAPWCRTAPNALLIHIKPLGADVS
Ga0315278_110804782	3300031997	Sediment	MRPCTRRIVSAAVDIKATSLNADRVEHAPWCRTAPNALLIHIKPLI
Ga0315278_113623291	3300031997	Sediment	MQPCTLRIASAEDDSKATSLTAVLVEHAPRCRTAPATL
Ga0315272_102908962	3300032018	Sediment	MRPCTLRIASAEDDIKATSLDAALVEHAPWCRTTPTALPI
Ga0315292_115078861	3300032143	Sediment	MRPCTLRIASAEVDIKATSLDADPVEHAPWCRAAPAALPIHIKPLLGDLTIW
Ga0315295_120889062	3300032156	Sediment	MQPCTLRIASAEYDIKATSLDPVLVEHAPWCRTTPNALPIRIKPLVV
Ga0315281_109234611	3300032163	Sediment	MRPCTLRIASAEDDIKATSLDAALVEHAPWCRTTPTALPIHI
Ga0315283_101166115	3300032164	Sediment	MRPCTLRIASAEDDTKATSLAAVLVEHAPWCRAAPATLPTHIKPPAATVG
Ga0315283_111920281	3300032164	Sediment	MRPCTLRIAPAEDDPKATSLTAALVEHAPWCRTAPNAL
Ga0315276_119629482	3300032177	Sediment	MRPCTLRIASAEVDIKATSLDADPVEHAPWCRAAPAA
Ga0315276_126223602	3300032177	Sediment	APFEDDPKATSLTAALGEHAPWCRTAPNALLIHIKPLAQSSGGIQGS
Ga0315270_100644534	3300032275	Sediment	MRPCTLRIASAEDDTKATSLTAALVEHAPWCRTAPNALPLHIKPLAGSMRVV
Ga0315287_101198683	3300032397	Sediment	MRPCTLRIASAEDDSKATSLTAVLVEHAPWCRTAPATLPTHIKPLTNDAP
Ga0315287_107604952	3300032397	Sediment	MRPCTLQIAPAEDDPKATSLTAALGEHAPWCRTAPNALLIHIKPLAQS
Ga0315287_113163081	3300032397	Sediment	MRPCTLRIASAEDDPKATSLAAVPVEHAPWCRTAPA
Ga0315287_117351332	3300032397	Sediment	MRPCTLRIASAEGDSKATSLDAVLVEHAPWCRTAPATLLIHIKPLALPLLSLSPP
Ga0316620_111492591	3300033480	Soil	MRPCTLRIASAAVGIEATSLDADRVEHAPWCRTAPAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056591

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences