Metagenome / Metatranscriptome Family F056590

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056590
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	57 residues
Representative Sequence	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRW
Number of Associated Samples	93
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.36 %
% of genes near scaffold ends (potentially truncated)	43.07 %
% of genes from short scaffolds (< 2000 bps)	39.42 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.803 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.365 % of family members)
Environment Ontology (ENVO)	Unclassified (72.993 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (49.635 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.78% β-sheet: 0.00% Coil/Unstructured: 51.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00239	Resolvase	6.57
PF00296	Bac_luciferase	4.38
PF03466	LysR_substrate	2.92
PF03401	TctC	2.19
PF04392	ABC_sub_bind	2.19
PF13432	TPR_16	2.19
PF01068	DNA_ligase_A_M	1.46
PF13545	HTH_Crp_2	1.46
PF13602	ADH_zinc_N_2	1.46
PF03061	4HBT	0.73
PF00724	Oxidored_FMN	0.73
PF16694	Cytochrome_P460	0.73
PF12697	Abhydrolase_6	0.73
PF08240	ADH_N	0.73
PF12172	DUF35_N	0.73
PF00871	Acetate_kinase	0.73
PF13414	TPR_11	0.73
PF02265	S1-P1_nuclease	0.73
PF00589	Phage_integrase	0.73
PF04290	DctQ	0.73
PF13333	rve_2	0.73
PF00027	cNMP_binding	0.73
PF00042	Globin	0.73
PF08281	Sigma70_r4_2	0.73
PF13426	PAS_9	0.73
PF01796	OB_aCoA_assoc	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	6.57
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	6.57
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	4.38
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.19
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.19
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.46
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.46
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.73
COG0282	Acetate kinase	Energy production and conversion [C]	0.73
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	0.73
COG1545	Uncharacterized OB-fold protein, contains Zn-ribbon domain	General function prediction only [R]	0.73
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.73
COG3426	Butyrate kinase	Energy production and conversion [C]	0.73

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
All Organisms	root	All Organisms	29.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
cellular organisms	root	All Organisms → cellular organisms	29.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.19 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.19 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.57 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.73 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.73 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.73 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.73 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005713\|Ga0066905_100744094	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005713\|Ga0066905_101469669	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005764\|Ga0066903_103304330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	871	Open in IMG/M
3300005764\|Ga0066903_104100784	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300009792\|Ga0126374_10593158	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300010043\|Ga0126380_10188562	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300010046\|Ga0126384_10187545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1626	Open in IMG/M
3300010046\|Ga0126384_10335189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1256	Open in IMG/M
3300010046\|Ga0126384_12331649	Not Available	517	Open in IMG/M
3300010360\|Ga0126372_10226427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1582	Open in IMG/M
3300010360\|Ga0126372_13328797	Not Available	500	Open in IMG/M
3300010361\|Ga0126378_11935522	Not Available	671	Open in IMG/M
3300010376\|Ga0126381_101616982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	936	Open in IMG/M
3300012358\|Ga0137368_10052334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3451	Open in IMG/M
3300012361\|Ga0137360_10209063	All Organisms → cellular organisms → Bacteria → Proteobacteria	1584	Open in IMG/M
3300012971\|Ga0126369_13024414	Not Available	550	Open in IMG/M
3300016319\|Ga0182033_10359526	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300016341\|Ga0182035_10212374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1538	Open in IMG/M
3300016341\|Ga0182035_11146245	Not Available	693	Open in IMG/M
3300016387\|Ga0182040_10296581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1235	Open in IMG/M
3300026524\|Ga0209690_1214203	Not Available	608	Open in IMG/M
3300027874\|Ga0209465_10398510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300031546\|Ga0318538_10508397	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300031572\|Ga0318515_10169106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1168	Open in IMG/M
3300031679\|Ga0318561_10090854	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300031682\|Ga0318560_10350733	Not Available	797	Open in IMG/M
3300031713\|Ga0318496_10262310	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300031744\|Ga0306918_10663396	Not Available	816	Open in IMG/M
3300031744\|Ga0306918_10705424	Not Available	789	Open in IMG/M
3300031763\|Ga0318537_10007049	All Organisms → cellular organisms → Bacteria	3702	Open in IMG/M
3300031768\|Ga0318509_10567998	Not Available	632	Open in IMG/M
3300031771\|Ga0318546_10001580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9846	Open in IMG/M
3300031779\|Ga0318566_10044167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2100	Open in IMG/M
3300031793\|Ga0318548_10500289	Not Available	594	Open in IMG/M
3300031797\|Ga0318550_10147355	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300031797\|Ga0318550_10500041	Not Available	586	Open in IMG/M
3300031833\|Ga0310917_10198326	Not Available	1341	Open in IMG/M
3300031846\|Ga0318512_10091646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1418	Open in IMG/M
3300031879\|Ga0306919_11510508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300031893\|Ga0318536_10602620	Not Available	549	Open in IMG/M
3300031894\|Ga0318522_10317483	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031896\|Ga0318551_10006027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4910	Open in IMG/M
3300031897\|Ga0318520_10113732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1534	Open in IMG/M
3300031942\|Ga0310916_10290101	Not Available	1384	Open in IMG/M
3300031942\|Ga0310916_11165196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300031946\|Ga0310910_10724570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	785	Open in IMG/M
3300031954\|Ga0306926_11607151	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300032001\|Ga0306922_10470004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1342	Open in IMG/M
3300032039\|Ga0318559_10289824	Not Available	759	Open in IMG/M
3300032039\|Ga0318559_10365881	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300032041\|Ga0318549_10303522	Not Available	719	Open in IMG/M
3300032044\|Ga0318558_10009921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	3567	Open in IMG/M
3300032044\|Ga0318558_10279324	Not Available	824	Open in IMG/M
3300032059\|Ga0318533_10397355	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300032059\|Ga0318533_10860267	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300032060\|Ga0318505_10472693	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032064\|Ga0318510_10392144	Not Available	590	Open in IMG/M
3300032066\|Ga0318514_10639160	Not Available	566	Open in IMG/M
3300032091\|Ga0318577_10003441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5622	Open in IMG/M
3300032261\|Ga0306920_100828384	Not Available	1357	Open in IMG/M
3300032261\|Ga0306920_101658603	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.16%
Loam	Environmental → Terrestrial → Soil → Loam	5.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	73.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	50.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.46%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066396_100657381	3300004267	Tropical Forest Soil	VKALAISLVAGVALCGIMAAPAWAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNYYRRYGYGYRSY
Ga0066388_1003199055	3300005332	Tropical Forest Soil	VKALAISLVAGAALCSIMSAPAWAMPMSNLASAASDLTLGQSVRYVCNRYGCRWR
Ga0066701_106670821	3300005552	Soil	MKALSIGLVAGAALCSVMSAPASAMPMSNLAVAASDLTLGQSVRYVCNRYRCRWR
Ga0066905_1007440942	3300005713	Tropical Forest Soil	VKALTISLAAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRYY
Ga0066905_1014696692	3300005713	Tropical Forest Soil	VKALAISMVAGAALGSVMSMPASAMPMSNLAAAASDLALGQSVRYVCN
Ga0066903_1033043301	3300005764	Tropical Forest Soil	VKALSIGLVAGAALCGVMLAPASAMPISNLAAAASDLALSQSVR*
Ga0066903_1041007842	3300005764	Tropical Forest Soil	VKALAISLITGVALCGIMSAPAAAMPMSNVAAAATDLKLGQSVRYVCG
Ga0066903_1069665073	3300005764	Tropical Forest Soil	VRALAIGLVAGAALCGVTSASASAMPMGNLATAASDLALGQNVRYVCNRSRCRWRP
Ga0074060_119572782	3300006604	Soil	VRALAIGLVAGAVLCGVASEPASAMPTANLATAASGLALGQNVRYVCNRYRCRWRPN
Ga0074063_100928763	3300006953	Soil	VRALAIGLVAGAALCGVASFPASAMPMGNLATAASDLALGQNVRYVCNRYRCRWRPNDAYRPGGYYG*
Ga0126374_105931582	3300009792	Tropical Forest Soil	MKALAIGLVAGTALCGVMSVPASAMPMDNLAAAASDLALGQSARYVCNRYRCRW
Ga0126380_101885621	3300010043	Tropical Forest Soil	MVAGAALGSVMSMPASAMPMSNLAAAASDLALGQSVRYVCNRYRCW
Ga0126380_103719052	3300010043	Tropical Forest Soil	MVASAALCSVMAVPASAMPMSNLAAAASDLALGQSVRYVCNRYRCWWRP
Ga0126384_101875451	3300010046	Tropical Forest Soil	VKALSIGLVAGAALCGVMSAPASAMPITNLAAAASDLALSQSVRYVCNR
Ga0126384_103351891	3300010046	Tropical Forest Soil	VKALTISLAAGAALCGVMSTPTSAMPISNLAAAASDLALGQS
Ga0126384_106462252	3300010046	Tropical Forest Soil	VKALAISLVAGVALCGIMSAPAWAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNYY
Ga0126384_108160921	3300010046	Tropical Forest Soil	YLRCNHDMEVPVKALAIRLVAGVTLCGVMSAPASAMPMSNLATAASDLALGQSVRYVCGKYRC*
Ga0126384_123316491	3300010046	Tropical Forest Soil	VKALTISLVAGAALCGVMSMPASAMPISNLAAAASDLALGQ
Ga0126382_100121726	3300010047	Tropical Forest Soil	VKALAISLVAGVALCGIMSAPAWAMPMSNLASAASDLTLGQSVRYVCNRYRCPWRPNYSYRGYYGYGPSSPLYP*
Ga0126373_124645561	3300010048	Tropical Forest Soil	VKALAISLITGVALCGIMSAPAAAMPMSNVAAAATDLKLGQSVRYVCGK
Ga0126372_102264274	3300010360	Tropical Forest Soil	VKALTISLVAGAALCGIMSAPASTMPMSDLAAAASDLALGQSVRYVCGRYRCWW
Ga0126372_133287971	3300010360	Tropical Forest Soil	MPVKALTTGLVAGAALHGIMSPPASAMPIGNLAAAASDLALDQSV
Ga0126378_119355221	3300010361	Tropical Forest Soil	VPVKALTIGLVAGAALHGIMSTPASAMPMGNLAAAASDLALGQSVRYVCNRHYGY
Ga0126377_102049483	3300010362	Tropical Forest Soil	VKALSIGLVAGAALCSVMLVPASAMPTDNLAAAASDLALGQSARYVCHRSRCRWRPNYVYRPQAYYGYGPSYYSY
Ga0126379_136816311	3300010366	Tropical Forest Soil	VKALSIGLVAGAALCGVMSAPASAMPITNLAAAASDLALSQSVRYVCNRYRCRWRPNYVYRPQA
Ga0126381_1016169821	3300010376	Tropical Forest Soil	VRALAIGLVAGAALCGVTSASASAMPMGNLATAASDLALGQNVRYVCNR
Ga0126383_128050431	3300010398	Tropical Forest Soil	VKALAISLVVGAALCGIMSTPASAMPMSNLASAASDLTLGQSVRY
Ga0137379_110183381	3300012209	Vadose Zone Soil	VKALAIGLVAGTALCGVMSVPASAMPMDNLAAAASDLALGQSARYVCNRYRCRWRPNYAYRPLGYYGYR
Ga0137384_103623853	3300012357	Vadose Zone Soil	VRALAIGLVAGAAFCGVASAPASAMPMGNLATAASDLGLGQHVRYVCNRYRCRWRPNYAYRPGGYY
Ga0137368_100523341	3300012358	Vadose Zone Soil	VKALAIGLVAGTALCGVMSVPASAMPMDNLAAAASDLALGQSARYVCNRYRCRWRPN*
Ga0137360_102090633	3300012361	Vadose Zone Soil	VKALAISLVVGAALCGIMSAPASTMPMSNLGVAASDLALGQSVRYRHQHR
Ga0137373_108413661	3300012532	Vadose Zone Soil	VKALAIGLVAGTALCGVMSVPASAMPMDNLAAAASDLALGQSVRYVCNRYRCRWRPN*
Ga0126375_106105842	3300012948	Tropical Forest Soil	VKALSIGLVAGAALCGVMSAPASAMPITNLAAAASDLALSQSVRYVCNRSRCRWRPNY
Ga0126369_130244141	3300012971	Tropical Forest Soil	VPVKALTIGLVAGAALHGIMSTPASAMPMGNLAAAASDLALGQSVRYVCN
Ga0182036_102925631	3300016270	Soil	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRW
Ga0182036_107186332	3300016270	Soil	VKAFAISLVAGAALCDIMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGC
Ga0182036_108773342	3300016270	Soil	MKALAIGLVAGTALCGVMSVPASAMPMDSLAAAASDLALGQSVRYVCHRSRCRWRPNY
Ga0182033_102707604	3300016319	Soil	VKAFAISLVAGAALCGIMSTPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNYY
Ga0182033_103595263	3300016319	Soil	VKALTITLAAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRYYRRHGYG
Ga0182035_102123741	3300016341	Soil	VKALAISLVAGAALCGIMSTPAWAMPMSNLASAASDLTLGQSVRYV
Ga0182035_111462451	3300016341	Soil	VKALTITLAAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRYYRRH
Ga0182035_121786431	3300016341	Soil	VKALAISLVAGTALCGIMSAPASALPMNNLAAAASDLALGQSVTYVCNQYRCRWRPDYYYGYAPSYYAW
Ga0182034_111766561	3300016371	Soil	VKALAISLVAGAALCGIMSTPAWAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRP
Ga0182040_101950131	3300016387	Soil	VKAFAISLVAGAALCDIMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNYYRRYGYG
Ga0182040_102965811	3300016387	Soil	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGC
Ga0182039_102846851	3300016422	Soil	VKAFAISLVAGAALCDIMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPN
Ga0182039_105084321	3300016422	Soil	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPN
Ga0182038_104569022	3300016445	Soil	MEVPVKALAISLVAGTALCGIMSAPASALPMNNLAAAASDLALGQSVTYVCNQYRCRWRPDYYYGYAPSYYAWYG
Ga0210404_107509861	3300021088	Soil	VRALAIGLVAGAVLCGVASEPASAMPTANLATAASGLALGQNVRYVCNRYRCRWRPNYAYRP
Ga0209690_12142031	3300026524	Soil	MKALSIGLVAGAALCSVMSAPASAMPMSNLAVAASDLTLGQSVRYVCNR
Ga0209465_103985101	3300027874	Tropical Forest Soil	VKALTISLVAGAALCRIMSTPASAMPISNLAAAASDLALGQSVRY
Ga0318541_101061331	3300031545	Soil	MEVPVKALAISLVAGAALCGIMSAPASALPMNNLAAAASDLALGQSVSYVCNQYRCRWRPDYYYGYA
Ga0318538_105083972	3300031546	Soil	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVC
Ga0318528_107759651	3300031561	Soil	VKALAISLVAGTALCGIMSAPASALPMNNLAAAASDLALGQSVTYVCNQYRCRWRPDYYYGYAPSYYAWYG
Ga0318515_101691061	3300031572	Soil	VRALAIGLVAGAALYGVASAPVSAMPIGNLAAAASDLALGHHVRYVCN
Ga0318542_100227924	3300031668	Soil	VKALAISLVAGAALCGIMSAPASALPMNDLAAAASDLALGQSVTYVCNQYRCRWRPDYYYGYAPSYYAWYG
Ga0318561_100908543	3300031679	Soil	VKALTITLAAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRYYRRHGY
Ga0318574_105206161	3300031680	Soil	VKAFAISLVAGAALCDIMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNYYRRYGYGYR
Ga0318560_103507331	3300031682	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRCNQYRCW
Ga0318496_102623101	3300031713	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRCNQY
Ga0306917_101246641	3300031719	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYRCWSRPNYYR
Ga0306917_106190192	3300031719	Soil	VKALSIGLVAGAALCGVMLAPASAMPISNLAAAASDLALSQSVRYVCHRSRCRWRPNYVYRPQAYYGYGPSDVPAICPLI
Ga0318500_105221591	3300031724	Soil	MSALAIGLVAGTALCGVMSVPASAMPTDNLAAAASDLALGQSARYVCNRYRCRWRPNCAYRPLGYGYG
Ga0318501_100201231	3300031736	Soil	VKALAISLVAGAALCGIMSAPASALPMNDLAAAASDLALGQSVTYVCNQYRCRWRPDYYYGYA
Ga0318501_103859791	3300031736	Soil	MKALAIGLVAGTALCGVMSVPASAMPMDSLAAAASDLALGQSVRYVCHRSRCRWRPNYAYRPLG
Ga0318501_106752631	3300031736	Soil	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNYYRRYGY
Ga0306918_106633961	3300031744	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRCNQYRCWS
Ga0306918_107054242	3300031744	Soil	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVCN
Ga0318537_100070494	3300031763	Soil	MEVPVKALAISLVAGAALCGIMSAPASALPMNNLAAAANDLALGQSVSYVCN
Ga0318537_103262561	3300031763	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRCNQYRCWSRPNYYRGSGYYGY
Ga0318509_103471813	3300031768	Soil	VKALTISLVVSGVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYRCWSRPNYYR
Ga0318509_105679982	3300031768	Soil	VKALTISLVAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRYVCNEYRSYYG
Ga0318521_106468851	3300031770	Soil	VKALAISLVTGVALCGIMSASASAMPMSNVAAAATDLKLGQSVRYVCGKYRCWWRPDYY
Ga0318546_1000158022	3300031771	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYRC
Ga0318546_104735491	3300031771	Soil	VKALAISLVTGVALCGIMSASAAAMPMSNVAAAATDLKLGQSVRYVCGKYRCWWRPDYYYGYA
Ga0318546_110161431	3300031771	Soil	MSALAIGLVAGTALCGVMSVPASAMPMDNLAAAASDLALGQSARYVCNRYRCRWRPNYAYRPLGYGYGPSYY
Ga0318498_100435921	3300031778	Soil	VKALSIGLVAGAALCGVMSAPASAMPITNLAAAASDLALSQSVRYVCNRSRCRGRPN
Ga0318566_100441674	3300031779	Soil	VRALAIGLVAGAALYGVASAPVSAMPIGNLAAAASDLALGHHVLY
Ga0318552_100481513	3300031782	Soil	VKALSIGLVAGAALCGVMSASASAMPITNLAAAASDLALSQSVRYVCNRSRCRWRPNYV
Ga0318529_100697483	3300031792	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRCNQYRCWSRPNYYRGS
Ga0318548_105002892	3300031793	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQS
Ga0318503_102829321	3300031794	Soil	VKALSIGLVAGAALCGVMSASASAMPITNLAAAASDLALSQRVRYVCNRSRCRWRPNYVYRPQADYGYG
Ga0318576_104158041	3300031796	Soil	VKALSIGLVAGAALCGVMSAPASAMPITNLAAAASDLALSQSVRYVCNRSRCRGRPNYVYRPQAY
Ga0318550_101473553	3300031797	Soil	VKALTITLAAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRY
Ga0318550_105000411	3300031797	Soil	VKALTISLVAGAALCGVMSTPASAMPISNLAAAASDLALGQSVRYV
Ga0318565_103452022	3300031799	Soil	VKALAISLVAGTALCGIMSAPASALPMNNLAAAASDLALGQSVTYVCNQYRCRWRPDYYY
Ga0318497_101359883	3300031805	Soil	VKALAISLVAGAALCGIMSAPASALPMNNLAAAANDLALGQSVSYVCNRYRCRWRPDYYYGYAPS
Ga0318497_102770561	3300031805	Soil	VKALTISLVVSGVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYRCWSRPNYYRGS
Ga0318568_108553371	3300031819	Soil	VALVLCETNHTEVPVKALAISLVTGVALCGIMSAPASALPTNNLAAAANDLALGQSVSYVCNQYRCRWRPNYYY
Ga0318567_100990141	3300031821	Soil	VKALSIGLVAGAALCGVMSASASAMPITNLAAAASDLALSQSVRYVCNRSRCRWR
Ga0310917_101983261	3300031833	Soil	VKALAISLVAGAALCGIMSAPASALPMNNLAAAANDLALGQSVSYVCN
Ga0318512_100916461	3300031846	Soil	VEALTISLIAGVALCGIMSTPASAMPISDLAAAASDLALGQSVRYVCNRYYGHYA
Ga0318512_103853741	3300031846	Soil	MEVPVKALAISLVAGAALCGIMSAPASALPMNNLAAAPNDLALGQSVSYVCNRYRCRWRPDYYYGYAPSYY
Ga0306919_115105082	3300031879	Soil	VKALTISLVVSGVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACN
Ga0306925_103056331	3300031890	Soil	VKALAISLVTGVALCGIMSAPAAAMPMSNVAAAATDLKLGQSVRYVCGKYRCWWRPDYYYGYAPSYYA
Ga0306925_112784632	3300031890	Soil	VKALSIGLVAGAALCGVMSAPASAMPITNLAAAASDLALSQSVRYVCNRSRCRWRPNYVYRP
Ga0306925_118387252	3300031890	Soil	VALVLCETNHTEVPVKALAISLVTGVALCGIMSAPASALPTNNLAAAANDLALGQSVSYVCNQYRCRWRPNYYYGYAPSYY
Ga0318536_106026201	3300031893	Soil	VKALTISLVAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRYVCNEY
Ga0318522_102421671	3300031894	Soil	MEVPVKALAISLVAGAALCGIMSAPASALPMNNLAAAANDLALGQSVSYVCNRYRCRWRPDYYYG
Ga0318522_103174831	3300031894	Soil	VKALTISLVVSAVLCGVMSASASAMPMSNLAAAASDLGLGQ
Ga0318551_1000602710	3300031896	Soil	VKALTISLVVSAVLCGVMSASASAMPMSNLAAAASDLGLGQSVRYACNQYRC
Ga0318520_101137323	3300031897	Soil	VKALTISLVAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRYVCNEYRSYYGYG
Ga0318520_101205261	3300031897	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRCNQYRCWSRPNYYRGSGYY
Ga0306923_120697201	3300031910	Soil	VKAFAISLVAGAALCDIMSAPASAMPMSNLASAASDLTLGQSVRYVCNRY
Ga0306921_116249831	3300031912	Soil	MEVPVKALAISLVAGAALCGIMSAPASALPMNNLAAAANDLALGQSVSYVCNWYRCRWRPDYYYGYAPSYYA
Ga0310916_102901011	3300031942	Soil	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVCNR
Ga0310916_106573671	3300031942	Soil	VKAFAISLVAGAALCDIMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNYYRRYGYGY
Ga0310916_111651963	3300031942	Soil	VKALTISMVAGTALCGVMSTPASAMPISNLAAAASDLALGQNVRYICNGYRSYY
Ga0310910_103067461	3300031946	Soil	VKALTISLVVSAVLCGVMSASASAMPMSNLAAAASDLGLGQSVRYACNQYRCWSRPN
Ga0310910_107245703	3300031946	Soil	VKALTISLVVSGVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYRCWS
Ga0310909_104141371	3300031947	Soil	VKALTISLVVTAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYRCWSRPNYYR
Ga0306926_116071512	3300031954	Soil	VKALTISLVAGAALCGVMSTPTSAMPISNLAAAASDLALGRSVRYVCNE
Ga0306926_124717281	3300031954	Soil	VRALAIGLVAGAAFYGVTSAPASAMPMGNLAAAASDLALGQHVRYVCNRSRC
Ga0306922_104700044	3300032001	Soil	VKALTISLVAGAALCGVMSTPASAMPISNLAAAASDLALGQSVRYVCDRYYG
Ga0318559_102898241	3300032039	Soil	VKALTISLVAGAGLCGVMSAPASAMPMSNLAAAASDLALAQSVRYACNGYR
Ga0318559_103658811	3300032039	Soil	VKALTISLVVSGVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYRC
Ga0318549_103035222	3300032041	Soil	VKALTISLVAGAGLCGVMSAPASAMPMSNLAAAASDLALAQSVRYACN
Ga0318558_100099211	3300032044	Soil	MEVPVKALAISLVAGAALCGIMSAPASALPMNNLAAAANDLAPGQSVSYVCN
Ga0318558_102793241	3300032044	Soil	VKALTISLVAGAGLCGVMSAPASAMPMSNLAAAASDLALAQSVRYACNGYRNYGYGYPAY
Ga0318570_105370901	3300032054	Soil	MKALAIGLVAGTALCGVMSAPASAMPMDSLAAAASDLALGQSVRYVCHRSRCRWRPNYAYRPGGYYSYG
Ga0318575_101772011	3300032055	Soil	MEVPVKALAISLVAGTALCGIMSAPASALPMNNLAAAASDLALGQSVTYVCNQYRCRWRPDYYYGYAPSYYA
Ga0318575_102605122	3300032055	Soil	VKALTISLVAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRYVCNEYRSYYGYGYPTYGY
Ga0318533_103973551	3300032059	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYR
Ga0318533_108602671	3300032059	Soil	MEVPVKALAISLVAGAALCGIMSAPASALPMNNLAAAANDLALGQSVSYVCNQY
Ga0318505_102660761	3300032060	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRCNQYRCWSRPNYYR
Ga0318505_104726932	3300032060	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYRCW
Ga0318510_103921442	3300032064	Soil	VKALTISLVAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRYVCN
Ga0318514_106391601	3300032066	Soil	VKALTISLVAGAALCGVMSTPTSAMPISNLAAAASDLALGQSVRY
Ga0306924_104688223	3300032076	Soil	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNYYRRYGYGYR
Ga0306924_124595032	3300032076	Soil	VKALAISLVAGAALCSIMSAPALALPMNNLAAAANDLALGQSVSYVCNRYRCRW
Ga0318577_1000344110	3300032091	Soil	VKALTISLVVSAVLCGVMSASASAMPMSNLAAAASDLGLGQSVRYACNQYR
Ga0318577_105391541	3300032091	Soil	VKALAISLVTGVALCGIMSASASAMPMSNVAAAATDLKLGQSVRYVCGKYRCWWRPDYHYGYAP
Ga0306920_1007496843	3300032261	Soil	VKALAISLVAGAALCGVMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNYYRRYGYGY
Ga0306920_1008283841	3300032261	Soil	VKAFAISLVAGAALCDIMSAPASAMPMSNLASAASDLTLGQSVRYVCNR
Ga0306920_1016586031	3300032261	Soil	VKALTISLVVSAVLCGVMSAPASAMPMSNLAAAASDLGLGQSVRYACNQYRCWSR
Ga0310914_101521041	3300033289	Soil	VKAFAISLVAGAALCDIMSAPASAMPMSNLASAASDLTLGQSVRYVCNRYGCRWRPNY
Ga0318519_110742282	3300033290	Soil	VKALAISLVAGTALCGIMSAPASALPMNNLAAAASDLALGQSVTYVCNQYRCRWRPDYYYGYAPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056590

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences