Metagenome / Metatranscriptome Family F056588

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056588
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	68 residues
Representative Sequence	VADKQRAKENRRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH
Number of Associated Samples	104
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.13 %
% of genes near scaffold ends (potentially truncated)	40.88 %
% of genes from short scaffolds (< 2000 bps)	83.21 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.591 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.467 % of family members)
Environment Ontology (ENVO)	Unclassified (39.416 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.314 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.15% β-sheet: 0.00% Coil/Unstructured: 53.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00296	Bac_luciferase	5.11
PF00355	Rieske	3.65
PF01494	FAD_binding_3	2.19
PF13620	CarboxypepD_reg	1.46
PF03401	TctC	0.73
PF16868	NMT1_3	0.73
PF13442	Cytochrome_CBB3	0.73
PF12951	PATR	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	5.11
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	4.38
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.19
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	2.19
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	2.19
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.59 %
Unclassified	root	N/A	12.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.59 %
Unclassified	root	N/A	12.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.59 %
Unclassified	root	N/A	12.41 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.20 %
Unclassified	root	N/A	12.41 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.20 %
Unclassified	root	N/A	12.41 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.76 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.76 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.73 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.41 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	8.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.76 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.41 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	8.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.76 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.41 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	8.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.76 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.76 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	8.03 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.73 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10173286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300001867\|JGI12627J18819_10114301	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300002245\|JGIcombinedJ26739_100383341	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300004629\|Ga0008092_11306845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300004633\|Ga0066395_10420750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300005174\|Ga0066680_10483919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300005332\|Ga0066388_101281231	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300005332\|Ga0066388_104404457	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005332\|Ga0066388_105184316	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005363\|Ga0008090_15670991	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005447\|Ga0066689_10238634	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005467\|Ga0070706_100987688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300005518\|Ga0070699_100006083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	10559	Open in IMG/M
3300005549\|Ga0070704_101804098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300005552\|Ga0066701_10255580	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005555\|Ga0066692_10437853	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005713\|Ga0066905_100343095	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005713\|Ga0066905_101042614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300005713\|Ga0066905_101226697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300005713\|Ga0066905_101373596	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005713\|Ga0066905_101458477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300005713\|Ga0066905_101490796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300005764\|Ga0066903_101921128	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005764\|Ga0066903_102816420	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005764\|Ga0066903_103420080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300005764\|Ga0066903_105621234	Not Available	660	Open in IMG/M
3300005764\|Ga0066903_108100736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300006028\|Ga0070717_10554916	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300006606\|Ga0074062_12985689	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300006796\|Ga0066665_10097387	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300006871\|Ga0075434_100302653	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300006939\|Ga0081244_1500570	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300006953\|Ga0074063_14230437	Not Available	550	Open in IMG/M
3300009162\|Ga0075423_11979429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300009792\|Ga0126374_10355527	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300010043\|Ga0126380_10198908	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300010043\|Ga0126380_11447651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300010046\|Ga0126384_10531012	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300010046\|Ga0126384_10659043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300010047\|Ga0126382_11532273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300010048\|Ga0126373_10211529	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300010048\|Ga0126373_11156661	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300010080\|Ga0127448_102422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300010358\|Ga0126370_11426001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300010359\|Ga0126376_10898909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	875	Open in IMG/M
3300010362\|Ga0126377_10978689	Not Available	912	Open in IMG/M
3300010362\|Ga0126377_12678239	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300010366\|Ga0126379_11594277	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300010366\|Ga0126379_12231630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300010376\|Ga0126381_102141132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300010376\|Ga0126381_102372893	Not Available	761	Open in IMG/M
3300010376\|Ga0126381_103100227	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300010398\|Ga0126383_10857139	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300010868\|Ga0124844_1039202	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300012180\|Ga0153974_1023465	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300012202\|Ga0137363_10057135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	2821	Open in IMG/M
3300012204\|Ga0137374_10075531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3293	Open in IMG/M
3300012205\|Ga0137362_10269310	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300012206\|Ga0137380_10096973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2694	Open in IMG/M
3300012373\|Ga0134042_1004544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300012380\|Ga0134047_1222733	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012393\|Ga0134052_1266586	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012403\|Ga0134049_1396998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300012406\|Ga0134053_1198802	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300012930\|Ga0137407_11861905	Not Available	574	Open in IMG/M
3300012961\|Ga0164302_10275331	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300012971\|Ga0126369_10898039	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300012971\|Ga0126369_11699478	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300015371\|Ga0132258_11947646	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300016294\|Ga0182041_11298100	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300016294\|Ga0182041_11340979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300016319\|Ga0182033_11089247	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300016319\|Ga0182033_11423113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300016319\|Ga0182033_12068966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300016357\|Ga0182032_10120643	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300016371\|Ga0182034_11307770	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300016387\|Ga0182040_10151888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1652	Open in IMG/M
3300016422\|Ga0182039_11273519	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300016445\|Ga0182038_11253126	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300016445\|Ga0182038_12124124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300021168\|Ga0210406_10587377	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300021178\|Ga0210408_10234107	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300021432\|Ga0210384_11326777	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300021444\|Ga0213878_10152041	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300021560\|Ga0126371_10866035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1048	Open in IMG/M
3300021560\|Ga0126371_11835807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300025910\|Ga0207684_10331321	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300025910\|Ga0207684_10840342	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300026494\|Ga0257159_1060326	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300027502\|Ga0209622_1017776	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300027874\|Ga0209465_10040529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2214	Open in IMG/M
3300028878\|Ga0307278_10028052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2581	Open in IMG/M
3300030903\|Ga0308206_1097622	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300031543\|Ga0318516_10012930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4090	Open in IMG/M
3300031543\|Ga0318516_10039783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2522	Open in IMG/M
3300031545\|Ga0318541_10867953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300031549\|Ga0318571_10383149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300031561\|Ga0318528_10770315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300031572\|Ga0318515_10292378	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300031573\|Ga0310915_10184421	Not Available	1454	Open in IMG/M
3300031573\|Ga0310915_10488977	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300031640\|Ga0318555_10276838	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300031668\|Ga0318542_10199761	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300031681\|Ga0318572_10897735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300031713\|Ga0318496_10312649	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300031747\|Ga0318502_10219533	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300031763\|Ga0318537_10312743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300031765\|Ga0318554_10002246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	8296	Open in IMG/M
3300031771\|Ga0318546_10834926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300031781\|Ga0318547_11019563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300031805\|Ga0318497_10812034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300031833\|Ga0310917_10723464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300031835\|Ga0318517_10034005	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300031896\|Ga0318551_10276636	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031897\|Ga0318520_10369865	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300031910\|Ga0306923_12210318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300031942\|Ga0310916_10285608	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300031947\|Ga0310909_10643674	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300032025\|Ga0318507_10022219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2267	Open in IMG/M
3300032042\|Ga0318545_10003148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4516	Open in IMG/M
3300032044\|Ga0318558_10097999	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300032052\|Ga0318506_10072382	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300032068\|Ga0318553_10251984	Not Available	922	Open in IMG/M
3300032089\|Ga0318525_10664344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300032090\|Ga0318518_10181048	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300032091\|Ga0318577_10567961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300032174\|Ga0307470_10572328	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.08%
Host-Associated	Host-Associated	2.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.08%
Plants	Host-Associated → Plants	2.19%
Fungi	Host-Associated → Fungi	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.73%
Mycelium	Host-Associated → Fungi → Mycelium	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.64%
Loam	Environmental → Terrestrial → Soil → Loam	20.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.65%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.19%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.46%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006939	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101732861	3300000597	Forest Soil	VADKQRAREQHQDERWSISDPKLMVSALFEESGEIAPIDIGQFGKRAGEIIARARHLPRR
JGI12627J18819_101143013	3300001867	Forest Soil	VADKQRAKENRRDEQWSLSDAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH*
JGIcombinedJ26739_1003833412	3300002245	Forest Soil	VADKQRAKENRRDEWWLLSDTKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0066397_100836142	3300004281	Tropical Forest Soil	MRREPLRPTFVDKKSARREPFGVPVADKQRAKEKHRDERWSFSDPKLMASALFEESGEIAPVDLGQFGKRAGEIIARATHLPRRRPH*
Ga0008092_113068451	3300004629	Tropical Rainforest Soil	KGARGGEPFGVPVVDKQRAREKHSDERWSLSDLKLIVSALFEESGEIAPVDLGQFGKRAGEIIACATRLPRRRPH*
Ga0066395_104207502	3300004633	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATHWSRRRPH*
Ga0066680_104839192	3300005174	Soil	VADKQRALEKHRDERWSISDPKLMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0066388_1012812312	3300005332	Tropical Forest Soil	VADKHRAKENRRDEWWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0066388_1041291832	3300005332	Tropical Forest Soil	GTAIACEPCAGNSSDERSLIKRSARRGTFGVPVADKQRAREQYQDERWSISDPKLMVSALFEESGEIAPVDLGQFGKRAGEIIARATRPPRRRPH*
Ga0066388_1044044572	3300005332	Tropical Forest Soil	DERSLIKRSARRGTFGVPVADKQRAREQHQDERWSISDPKMMVSALFEESGQIAPIDIGQFGKRAGEIIARARHLPRRRPH*
Ga0066388_1051843162	3300005332	Tropical Forest Soil	DERSLIKRSARRGTFGVPVADKQRAREQHQDERWSISDPKLMVSALFEESGQIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0008090_156709912	3300005363	Tropical Rainforest Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGDIAPVDFGQFGKRAGEIIARATYPPRPRRRP
Ga0066689_102386341	3300005447	Soil	GVPVADKQRAKQNRRDERWSLSHAKPMVSALFEESGEIAAVDLGLFGKRAGEIIARATRLPRRRPH*
Ga0070706_1009876882	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VAHKQRAKENRRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0070699_1000060835	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VACRAMRGELPRWKFVSSKRAGGTFGVPVADKQRAREKHRDERWSISDPKLMVSALFEDSGEIAPVDLGQFGKRAGEIIARATYPQRRRPH*
Ga0070704_1018040981	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VADKQRAKQNRRDERWSLSDAKPMVSALFEESGEIAAVDLGLFGKRAGEIIAHATRLPRRRPH*
Ga0066701_102555801	3300005552	Soil	HRDERWSISDPKLMVSALFEDSGEIAPVDLGQFGKRAGEIIARATYPQRRRPH*
Ga0066692_104378531	3300005555	Soil	RAGGTFGVPVADKQRAREKHRDERWSISDPKLMVSALFEDSGEIAPVDLGQFGKRAGEIIARATYPQRRRPH*
Ga0066905_1003430952	3300005713	Tropical Forest Soil	VADKQRAKEKHQGERWSFLDPKLMVSALFEESGGIAPVDLGQFGKRAGEIIARATQLPRRRPH*
Ga0066905_1010426142	3300005713	Tropical Forest Soil	VPVADKQRAREKHQDDRWSISDPKMMVSALFEESGEIAPVDLGRFGKRAGEIIARATQLPRRRPY*
Ga0066905_1012266972	3300005713	Tropical Forest Soil	VADKQRAREQHQDERWSISDPKLMVSVLFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0066905_1013735961	3300005713	Tropical Forest Soil	DKQRAREQHQDERWSISDPKLMVSALFEESGEIAPVDLGQFGKRAGEIIARATRPPRRRPH*
Ga0066905_1014584772	3300005713	Tropical Forest Soil	VADKQRAREKHRDERWSFSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATHWSRRRPH*
Ga0066905_1014907962	3300005713	Tropical Forest Soil	VADKQRAREKHQDERWSIADPKMMVSALFEESGEIAPVDIGRFGKRAGEIIARATQLPRRRPH*
Ga0066903_1019211282	3300005764	Tropical Forest Soil	VADKQRAREQHQDGRWSISDPKLMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0066903_1028164202	3300005764	Tropical Forest Soil	VADKQRAKENRRDERWSLADAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0066903_1034200802	3300005764	Tropical Forest Soil	VADRQRAKENRQDDRWSLSDHKLMVSALFKESGEIAPVDLGQFGKRAGEIIARATHWSRRRPH*
Ga0066903_1056212341	3300005764	Tropical Forest Soil	VVDEQRAKENRQDERWSPSDPKLIVSALFEKSGDIAPVDLGQFGKRAGEIIARAMHWPRRRPH*
Ga0066903_1081007362	3300005764	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDPKVIVSALFEESGEIAPVDFGQFGKRAGEIIARATSPPRPRRRPH*
Ga0070717_105549163	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VADKQRAKENPRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0074062_129856892	3300006606	Soil	IKQERAFWGNFFGVPVAGKHRAKENSRDERWSLSDAKPMVSALFEESGEIAAVDLGLFGRRAGEIIAHATRLPRRRPH*
Ga0066665_100973872	3300006796	Soil	SFFGVPVADKQRAKQNRRDERWSLSDAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0075434_1003026531	3300006871	Populus Rhizosphere	VSSKRAGGTFGVPVVDKQRAREKHRDERWSISDPKLMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0081244_15005701	3300006939	Tropical Rainforest Soil	VADRQRAKENRQDDRWSLSDRKLMVSALFEESGEIAPVDLGQFGKRAGEIIARATHWSRRRPH*
Ga0074063_142304372	3300006953	Soil	VAGKHRAKENSRDERWSLSDAKPMVSALFEESGEIAAVDLGLFGRRAGEIIAHATRLPRRRPH*
Ga0075423_119794291	3300009162	Populus Rhizosphere	VADKQRAKENRRDEWWSLSDAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0126374_103555272	3300009792	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDLKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPSRPRRRPH*
Ga0126380_101989082	3300010043	Tropical Forest Soil	VADKQRAREQHQDERWSISDPKLMVSALFEESGQIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0126380_106369941	3300010043	Tropical Forest Soil	EPCAGNSSDERSLIKRSARRGTFGVPVADKQRAREQYQDERWSISDPKLMVSALFEESGEIAPVDLGQFGKRAGEIIARATRPPRRRPH*
Ga0126380_114476512	3300010043	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPPRPRRRPH*
Ga0126384_102167091	3300010046	Tropical Forest Soil	PCAGNSSDERSLIKRSARRGTFGVPVADKQRAREKHQDDRWSISDPKMMVSALFEESGEIAPVDLGRFGKRAGEIIARATQLPRRRPY*
Ga0126384_102199072	3300010046	Tropical Forest Soil	MRREPLRPTFVDKKSARREPFGVPVADKQRAKEKHRDERWSISDPKLMASALFEESGEAAPVDLGQFGKRAGEIIARATHLPRRRPH*
Ga0126384_105310122	3300010046	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPARPRRRPH*
Ga0126384_106590432	3300010046	Tropical Forest Soil	VELFGVPVADRQRAKENRRDERWALSDPKLMVSALFEQSGDIAPVDLGQFGKRAGEIIARATQLPRRRPH*
Ga0126382_115322731	3300010047	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPSRPRRRPH*
Ga0126373_102115292	3300010048	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGDIAPVDFGQFGKRAGEIIARATYPPRPRRRPH*
Ga0126373_111566611	3300010048	Tropical Forest Soil	KECAGELFGVPVADRQRAKENRQDDRWSLSDHKPMVSALFKENGEIAPVDLGQFGKRAGEIIARATHWSRRRPH*
Ga0127448_1024221	3300010080	Grasslands Soil	FGVPVADKQRAREKHRDERWSISDPKLMVSALFEASGEIAPVDLGQFGKRAGEIIARATYPQRRRPH*
Ga0126370_114260012	3300010358	Tropical Forest Soil	MFVYKIRSGGGNFFGVPVADKQRAKENRRDERWSLSDAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0126376_108989091	3300010359	Tropical Forest Soil	VADKQRAKVNRRDERWSLSDAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0126377_109786891	3300010362	Tropical Forest Soil	VADKHRAKENSRDERWSLSDAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPTRRPH*
Ga0126377_126782391	3300010362	Tropical Forest Soil	QDERWSISDPKLMVSALFEESGEIAPVDLGQFGKRAGEIIARATRPPRRRPH*
Ga0126379_115942772	3300010366	Tropical Forest Soil	VVDKQRAREKHSDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYSPRRRPH*
Ga0126379_122316301	3300010366	Tropical Forest Soil	VVDKQRAREQHQDERWSISDPKLMVSALFEESGEIAPVDLGRFGKRAGEIIARATQLPRRRPY*
Ga0126381_1021411322	3300010376	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPARPRRRPH*
Ga0126381_1023728931	3300010376	Tropical Forest Soil	VADRQKAKEYRQDDRWSLSDHKLMVSALFEESGEIAPVDLGQFGKRAGEIIARATHWSRRRPH*
Ga0126381_1031002272	3300010376	Tropical Forest Soil	RAREQHQDERWSISDPKLMVSALFEESGQIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0126383_102369062	3300010398	Tropical Forest Soil	MRREPLRPTFVDKKSARREPFGVPVADKQRAKEKHRDERWSFSDPKLMASALFEESGEAAPVDLGQFGKRAGEIIARATHLPRRRPH*
Ga0126383_108571392	3300010398	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDLKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPARPRRRPH*
Ga0124844_10392022	3300010868	Tropical Forest Soil	ADRQRVKENRQDHRWSLSDRKLMVSALFEESGEIAPVDLGQFGKRAGEIIACATRLPRRRPH*
Ga0153974_10234652	3300012180	Attine Ant Fungus Gardens	VADKQRAKENRRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0137363_100571352	3300012202	Vadose Zone Soil	VANGQRAKEKHQDERWSISDPKLMVSALFEESGDIAPVDLGQFGKRAGEIIARATYPLRRRPH*
Ga0137374_100755312	3300012204	Vadose Zone Soil	VADKQRAREKHRDERWSISDRKLMVSALFEDSGEIAPVDLGQFGKRAGEIIARATYPQRRRPH*
Ga0137362_102693101	3300012205	Vadose Zone Soil	VANGQRAKEKHQDERWSISDPKLMVSALFEESGDIAPVDLGQFGKRAGAIIARATYPLRRRPH*
Ga0137380_100969732	3300012206	Vadose Zone Soil	VADKQRAREKHRDERWSISDRKLMVSALFEESGEIASVDLGQFGKRAGEIIARATYPQRRRPH*
Ga0134042_10045442	3300012373	Grasslands Soil	NFFGVPVADKQRAKQNRRDERWSLSDAKPMVSALFEESGEIAAVDLGLFGKRAGEIIARATRLPRRRPH*
Ga0134047_12227332	3300012380	Grasslands Soil	FFGVPVADKQRAKQNRRDERWSLSHAKPMVSALFEESGEIAAVDLGLFGKRAGEIIARATRLPRRRPH*
Ga0134052_12665861	3300012393	Grasslands Soil	RDERWSISDPKLMVSALFEESGEIASVDLGQFGKRAGEIIARATYPQRRRPH*
Ga0134049_13969982	3300012403	Grasslands Soil	GTFGVPVADKQRAREKHRDERWSISDPKLMVSALFEDSGEIAPVDLGQFGKRAGEIIARATYPQRRRPH*
Ga0134053_11988022	3300012406	Grasslands Soil	GTFGVPVADKQRAREKHRDERWSISDPKLMVSALFEDSGEIAPVDLGQFGKRAGEIIARATYPQRRRAH*
Ga0137407_118619052	3300012930	Vadose Zone Soil	VANGQRAKEKHQDERWSISDPKLMVSALFEESGEIAPVDLGQFVKRAGEIIARATYPQRRRPH*
Ga0164302_102753311	3300012961	Soil	MAYKHGAKENRRYERWSLPDAKPMVSALFEESGEIAAVDLGLFGKRAGEIIAHATRLPRRRPH*
Ga0126369_108980392	3300012971	Tropical Forest Soil	VADKQRAKENRRDERWSLADAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPTRRPH*
Ga0126369_116994782	3300012971	Tropical Forest Soil	VADKHRAKENSRDERWSLSDAKPMVSALFEESGEIAPVDLGLFGKRAGEIIAHATRLPRRRPH*
Ga0132258_119476462	3300015371	Arabidopsis Rhizosphere	MNVRLGRGNFFGVPVADKQRAKENRRDERWSLSDAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH*
Ga0182041_112981001	3300016294	Soil	PFGVPVADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYLPRPRRRPH
Ga0182041_113409792	3300016294	Soil	VADRQRARQKHQDERWSLSDPKLMVSALFEESGEIAPVDLGQFGKRAGEIIARATHTPRRRPH
Ga0182033_110892471	3300016319	Soil	KGARGGEPFGVPVADKQSARDARQKHQDERWSLSDPKLMVSALFEESGEIAPVDFGQFGKRAGEIIARATYPPRPRRRPH
Ga0182033_114231132	3300016319	Soil	VADKHRAKENRRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRCRPH
Ga0182033_120689662	3300016319	Soil	FVNKEERAGELFGVPVADRQRAKENRQDDRWSLSDHKLMVSALFKESGEIAPVDLGQFGKRAGEIIARATHWSCRRPH
Ga0182032_101206432	3300016357	Soil	FFGVPVADKQRAKENRRDERWSLSDAKPMVSALFEESGEIAAVDFGQFGKRAGEIIARATQLPRRRPH
Ga0182034_113077702	3300016371	Soil	FFGVPVADKQRAKENRRDERWSLADAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH
Ga0182040_101518882	3300016387	Soil	VADKQRAREKRQDERWSLSDPKLIVSALFEESGEIAPVDFGRFGKRAGEIIARAKYLPRRRPY
Ga0182039_112735191	3300016422	Soil	PFGVPVADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPPRPRRRPH
Ga0182038_112531261	3300016445	Soil	KERAGNFFGVPVADKQRAKENRRDERWSLSDAKPMVSALFEESGEIAAVDFGQFGKRAGEIIARATQLPRRRPH
Ga0182038_121241242	3300016445	Soil	MFVYTGGGTFFGVPVADKQRAKENRRDERWSLADAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH
Ga0210406_105873772	3300021168	Soil	GNFFGVLMADKHGAKENRRYERWSLPDAKPMVSALFEESGEIAAVDLGLFGKRAGEIIAHATRLPRRRPH
Ga0210408_102341072	3300021178	Soil	VADKQRAKENRRDEWWLLSDTKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH
Ga0210384_113267772	3300021432	Soil	GELFFGVPVADKQRAKENRRDEWWLLSDTKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH
Ga0213878_101520412	3300021444	Bulk Soil	VRYKKERAGELFGVPVADRQRAKENRRDERWSLSDAKPMVSALFAESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH
Ga0126371_108660352	3300021560	Tropical Forest Soil	VADKQRAREQHQDERWSISDPKLMVSALFEESGQIAPVDLGQFGKRAGEIIARATRLPRRRPH
Ga0126371_108794312	3300021560	Tropical Forest Soil	MACRAMRGNSCDECSFINRSGGGNFFGVPVADKHRAKENSRDERWSLSDAKPMVSALFEESGEIAPVDLGLFGKRAGEIIAHATRLPRRRPH
Ga0126371_118358072	3300021560	Tropical Forest Soil	VNKKERAGELFGVPVADRQRAKENRQDDRWSLSDHKLMVSALFEESGEIAPVDLGQFGKRAGEIIARATHWSRRRPH
Ga0207684_103313212	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VAHKQRAKENRRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH
Ga0207684_108403422	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VADKQRAKENPRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH
Ga0257159_10603262	3300026494	Soil	RRDERWSLSDANPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH
Ga0209622_10177762	3300027502	Forest Soil	VADKQRAKENRRDEQWSLSDAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH
Ga0209465_100405292	3300027874	Tropical Forest Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATHWSRRRPH
Ga0307278_100280521	3300028878	Soil	VAEKQREKEKHQHKRWSISDPKLMACALFEDSGEVPPIDFGQFGKRAGEIIARATRLPRRNPH
Ga0308206_10976222	3300030903	Soil	FGVPVAEKQREKEKHQHKRWSISDPKLIVSALFEDSGGVAPVDLGQFGKRAGEIIAHAARLPRRKPH
Ga0318516_100129302	3300031543	Soil	VADKQRAREKRQDERWSLSDPKLIVSALFEESGEIAPVDFGRFGKRAGEIIARAKYLPRRRPH
Ga0318516_100397833	3300031543	Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPPRPRRRPH
Ga0318541_108679531	3300031545	Soil	MFVYTGGGTFFGVPVADKQRAKENRRDERWSLSDAKPMVSALFEESGEIAAVDFGQFGKRAGEIIARATQLPRRRPH
Ga0318571_103831492	3300031549	Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYLPRPRRRPH
Ga0318528_107703151	3300031561	Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATY
Ga0318573_100953711	3300031564	Soil	MRGNSYDECSFIKKERAGNFFGVPVADKQRAKENRRDERWSLADAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH
Ga0318515_102923782	3300031572	Soil	NKEERAGELFGVPVADRQRAKENRQDDRWSLSDHKPMVSALFKESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0310915_101844211	3300031573	Soil	VADRQTAKETHQDDLWSLSDRKLMVSALFEESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0310915_104889771	3300031573	Soil	VADKQRAKENRRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRCRPH
Ga0318555_102768382	3300031640	Soil	VADKQRAKENRRDERWSLADAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH
Ga0318542_101997611	3300031668	Soil	NKEERAGELFGVPVADRQRAKENRQDDRWSLSDHKLMVSALFKESGEIAPVDLGQFGKRAGEIIARATHWSCRRPH
Ga0318561_106515941	3300031679	Soil	VPCAGNFGDERSLIKRSARRELFGVPVADRQTAKETHQDDLWSLSDRKLMVSALFEESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0318572_108977352	3300031681	Soil	VADKHRAKENRRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH
Ga0318496_103126491	3300031713	Soil	EERAGELFGVPVADRQRAKENRQDDRWSLSDHKLMVSALFKESGEIAPVDLGQFGKRAGEIIARATHWSCRRPH
Ga0318502_102195332	3300031747	Soil	KEERAGELFGVPVADRQRAKENRQDDRWSLSDHKPMVSALFKESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0318537_103127431	3300031763	Soil	VADKQRAKENRRDEWWSLSDAKPMVSALFEESGEIAPVDLGQFGKRAGEIIARATRLPRRRPH
Ga0318554_100022465	3300031765	Soil	VADKQRAREKRQDERWSLSDPKLIVSALIEESGEIAPVDFGRFGKRAGEIIARAKYLPRRRPH
Ga0318546_108349261	3300031771	Soil	VPVADRQRAKETHQDDLWSLSDRKLMVSALFEESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0318547_110195632	3300031781	Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIAR
Ga0318497_108120342	3300031805	Soil	ERAGELFGVPVADRQRAKENRQDDRWSLSDHKPMVSALFKESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0310917_107234641	3300031833	Soil	GELFGVPVADRQRAKENRQDDRWSLSDHKLMVSALFKESGEIAPVDLGQFGKRAGEIIARATHWSCRRPH
Ga0318517_100340051	3300031835	Soil	FVNKEERAGELFGVPVADRQRAKENRQDDRWSLSDHKPMVSALFKESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0318551_102766362	3300031896	Soil	VADKQRAREKRQDERWSPSDPKLIVSALFEESGEIAPVDFGRFGKRAGEIIARAKYLPRRRPH
Ga0318520_103698652	3300031897	Soil	KEERAGELFGVPVADRQRAKENRQDDRWSLSDHKLMVSALFKESGEIAPVDLGQFGKRAGEIIARATHWSCRRPH
Ga0306923_122103181	3300031910	Soil	RGNFFGVPVADKQRAKENRRDERWSLADAKPMVSALFEESGEIAAVDLGQFGKRAGEIIARATRLPRRRPH
Ga0310916_102856081	3300031942	Soil	GVPVADKQSARDARQKHQDERWSLSDPKLMVSALFEESGEIAPVDFGQFGKRAGEIIARATYLPRPRRRPH
Ga0310909_106436741	3300031947	Soil	TFVNKEERAGELFGVPVADRQRAKENRQDDRWSLSDHKLMVSALFKESGEIAPVDLGQFGKRAGEIIARATHWSCRRPH
Ga0318507_100222191	3300032025	Soil	GTFFGVPVADKQRAKENRRDERWSLSDAKPMVSALFEESGEIAAVDFGQFGKRAGEIIARATQLPRRRPH
Ga0318545_100031485	3300032042	Soil	RQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPPRPRRRPH
Ga0318558_100979991	3300032044	Soil	ARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYPPRPRRRPH
Ga0318506_100723822	3300032052	Soil	VADRQTAKETHQDDLWSLSDRKLMVSALFKESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0318505_101172902	3300032060	Soil	YDERSLIKRSARGELFGVPVADRQRAKENRQDDRWSLSDHKPMVSALFKESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0318553_102519842	3300032068	Soil	VADRQRAKETHQDDLWSLSDRKLMVSALFEESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0318525_106643441	3300032089	Soil	VADKQSARDARQKHQDERWSLSDPKLIVSALFEESGEIAPVDFGQFGKRAGEIIARATYLPRPRRR
Ga0318518_101810481	3300032090	Soil	VADRQRAKENRQDDLWSLSDRKLMVSALFEESGEIAPVDLGQFGKRAGEIIARGTHWSRRRPH
Ga0318577_105679611	3300032091	Soil	YTGGGTFFGVPVADKQRAKENRRDERWSLSDAKPMVSALFEESGEIAAVDFGQFGKRAGEIIARATQLPRRRPH
Ga0307470_105723281	3300032174	Hardwood Forest Soil	FFGVPVADKHRAKENSRDERWSLSDAKPMVSALFEESGEIAAVDLGLFGKRAGEIIAHATRLPRRRPH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056588

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences