Metagenome / Metatranscriptome Family F056503

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056503
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	62 residues
Representative Sequence	MNGKSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSG
Number of Associated Samples	111
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.08 %
% of genes from short scaffolds (< 2000 bps)	94.89 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.350 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (32.117 % of family members)
Environment Ontology (ENVO)	Unclassified (71.533 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.723 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.35% β-sheet: 0.00% Coil/Unstructured: 51.65%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF02350	Epimerase_2	9.49
PF00486	Trans_reg_C	0.73
PF01380	SIS	0.73
PF13620	CarboxypepD_reg	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	9.49
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	9.49

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	75.18 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	75.18 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	73.72 %
Unclassified	root	N/A	3.65 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	73.72 %
Unclassified	root	N/A	3.65 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	73.72 %
Unclassified	root	N/A	3.65 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1024982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1037	Open in IMG/M
3300002558\|JGI25385J37094_10061779	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1223	Open in IMG/M
3300002560\|JGI25383J37093_10174187	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300002562\|JGI25382J37095_10118217	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	908	Open in IMG/M
3300002562\|JGI25382J37095_10276633	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300002908\|JGI25382J43887_10206590	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	940	Open in IMG/M
3300002908\|JGI25382J43887_10314626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300002909\|JGI25388J43891_1025674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	995	Open in IMG/M
3300002916\|JGI25389J43894_1066696	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	616	Open in IMG/M
3300002916\|JGI25389J43894_1072199	Not Available	597	Open in IMG/M
3300005174\|Ga0066680_10255763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1113	Open in IMG/M
3300005174\|Ga0066680_10290184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1043	Open in IMG/M
3300005176\|Ga0066679_10015474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3916	Open in IMG/M
3300005176\|Ga0066679_10345149	Not Available	973	Open in IMG/M
3300005180\|Ga0066685_10168827	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1494	Open in IMG/M
3300005180\|Ga0066685_10385525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	973	Open in IMG/M
3300005180\|Ga0066685_10436959	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	908	Open in IMG/M
3300005181\|Ga0066678_10423298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	884	Open in IMG/M
3300005181\|Ga0066678_10484220	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	823	Open in IMG/M
3300005186\|Ga0066676_10495150	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005446\|Ga0066686_10375730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	970	Open in IMG/M
3300005450\|Ga0066682_10725969	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	607	Open in IMG/M
3300005552\|Ga0066701_10736221	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	590	Open in IMG/M
3300005554\|Ga0066661_10120976	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300005557\|Ga0066704_10288318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1111	Open in IMG/M
3300005557\|Ga0066704_10448781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	852	Open in IMG/M
3300005559\|Ga0066700_10268755	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1196	Open in IMG/M
3300005560\|Ga0066670_10731047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	599	Open in IMG/M
3300005569\|Ga0066705_10643180	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	645	Open in IMG/M
3300005574\|Ga0066694_10119703	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1238	Open in IMG/M
3300005576\|Ga0066708_10044138	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300005576\|Ga0066708_10473518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	806	Open in IMG/M
3300005586\|Ga0066691_10376878	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	841	Open in IMG/M
3300005586\|Ga0066691_10429419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	787	Open in IMG/M
3300006031\|Ga0066651_10058491	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300006046\|Ga0066652_100651839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	998	Open in IMG/M
3300006755\|Ga0079222_11416835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	644	Open in IMG/M
3300006797\|Ga0066659_10180828	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300006797\|Ga0066659_11836687	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300006800\|Ga0066660_11213078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300006954\|Ga0079219_10084056	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1506	Open in IMG/M
3300006954\|Ga0079219_11827745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300007258\|Ga0099793_10097848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1354	Open in IMG/M
3300009012\|Ga0066710_100672288	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300009088\|Ga0099830_10478349	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1014	Open in IMG/M
3300009090\|Ga0099827_11312205	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300009137\|Ga0066709_101532101	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300010078\|Ga0127487_116988	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300010085\|Ga0127445_1036521	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300010104\|Ga0127446_1060018	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300010105\|Ga0127470_1042739	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1274	Open in IMG/M
3300010108\|Ga0127474_1016939	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300010111\|Ga0127491_1026609	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	828	Open in IMG/M
3300010117\|Ga0127449_1096669	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300010117\|Ga0127449_1125240	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300010119\|Ga0127452_1009720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300010119\|Ga0127452_1033450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	749	Open in IMG/M
3300010122\|Ga0127488_1022679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	877	Open in IMG/M
3300010122\|Ga0127488_1134325	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	915	Open in IMG/M
3300010126\|Ga0127482_1113195	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300010127\|Ga0127489_1174745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1003	Open in IMG/M
3300010133\|Ga0127459_1025271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	998	Open in IMG/M
3300010134\|Ga0127484_1102184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1024	Open in IMG/M
3300010303\|Ga0134082_10230215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	764	Open in IMG/M
3300010304\|Ga0134088_10488189	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300010320\|Ga0134109_10005238	All Organisms → cellular organisms → Bacteria	3445	Open in IMG/M
3300010321\|Ga0134067_10224523	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
3300010325\|Ga0134064_10030477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1581	Open in IMG/M
3300010325\|Ga0134064_10201844	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	714	Open in IMG/M
3300010329\|Ga0134111_10039181	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1683	Open in IMG/M
3300010333\|Ga0134080_10187700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	891	Open in IMG/M
3300010333\|Ga0134080_10242879	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300010337\|Ga0134062_10420427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300010905\|Ga0138112_1092459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	932	Open in IMG/M
3300012199\|Ga0137383_10386625	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1025	Open in IMG/M
3300012199\|Ga0137383_10463894	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	928	Open in IMG/M
3300012200\|Ga0137382_10433692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	929	Open in IMG/M
3300012201\|Ga0137365_10475242	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	919	Open in IMG/M
3300012203\|Ga0137399_10771964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	809	Open in IMG/M
3300012207\|Ga0137381_10447811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1127	Open in IMG/M
3300012209\|Ga0137379_11259120	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	646	Open in IMG/M
3300012210\|Ga0137378_10407474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1261	Open in IMG/M
3300012211\|Ga0137377_10331020	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1459	Open in IMG/M
3300012211\|Ga0137377_11811633	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012285\|Ga0137370_10226732	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1102	Open in IMG/M
3300012349\|Ga0137387_10057651	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2611	Open in IMG/M
3300012349\|Ga0137387_10878482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	649	Open in IMG/M
3300012349\|Ga0137387_11017857	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012350\|Ga0137372_10195811	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300012351\|Ga0137386_10432684	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300012351\|Ga0137386_10456492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	920	Open in IMG/M
3300012351\|Ga0137386_10886667	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300012354\|Ga0137366_10230543	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1377	Open in IMG/M
3300012356\|Ga0137371_10904739	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300012357\|Ga0137384_11335245	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300012359\|Ga0137385_10264624	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1486	Open in IMG/M
3300012376\|Ga0134032_1236957	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012380\|Ga0134047_1183306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1026	Open in IMG/M
3300012385\|Ga0134023_1115432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	956	Open in IMG/M
3300012386\|Ga0134046_1043111	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1016	Open in IMG/M
3300012392\|Ga0134043_1042698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	964	Open in IMG/M
3300012395\|Ga0134044_1182741	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	961	Open in IMG/M
3300012398\|Ga0134051_1366867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	866	Open in IMG/M
3300012400\|Ga0134048_1370341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	711	Open in IMG/M
3300012532\|Ga0137373_10139701	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300012923\|Ga0137359_10539087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1027	Open in IMG/M
3300012925\|Ga0137419_10870017	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M
3300012927\|Ga0137416_10813540	Not Available	827	Open in IMG/M
3300012930\|Ga0137407_10353963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1353	Open in IMG/M
3300012972\|Ga0134077_10438054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300012975\|Ga0134110_10112172	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300012977\|Ga0134087_10245649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	818	Open in IMG/M
3300015245\|Ga0137409_10555285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	975	Open in IMG/M
3300017656\|Ga0134112_10197576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	785	Open in IMG/M
3300017659\|Ga0134083_10130527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1008	Open in IMG/M
3300026298\|Ga0209236_1095292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1349	Open in IMG/M
3300026305\|Ga0209688_1074316	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300026313\|Ga0209761_1066988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1923	Open in IMG/M
3300026327\|Ga0209266_1150839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	940	Open in IMG/M
3300026328\|Ga0209802_1157599	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	948	Open in IMG/M
3300026329\|Ga0209375_1003853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10335	Open in IMG/M
3300026333\|Ga0209158_1237810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	625	Open in IMG/M
3300026342\|Ga0209057_1118291	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1002	Open in IMG/M
3300026532\|Ga0209160_1191143	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300026532\|Ga0209160_1266577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300026537\|Ga0209157_1063416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1888	Open in IMG/M
3300026538\|Ga0209056_10326209	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1033	Open in IMG/M
3300026547\|Ga0209156_10179605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1017	Open in IMG/M
3300026548\|Ga0209161_10100442	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1746	Open in IMG/M
3300026552\|Ga0209577_10205750	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1509	Open in IMG/M
3300027643\|Ga0209076_1054348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1135	Open in IMG/M
3300027748\|Ga0209689_1103155	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1467	Open in IMG/M
3300027862\|Ga0209701_10361818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	818	Open in IMG/M
3300027882\|Ga0209590_10794610	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300028536\|Ga0137415_10658459	Not Available	859	Open in IMG/M
3300031965\|Ga0326597_10544305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1254	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	42.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	32.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	29.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010078	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010105	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010111	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010127	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10249821	3300002557	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPLAVLPAVSGTDGAEADAEGDAM
JGI25385J37094_100617793	3300002558	Grasslands Soil	MNGKSMHWVNRLAVLGLVVGLTAGFAVAGVAQSVGGQAYSTYVNTPVGYSGPSPLAVL
JGI25383J37093_101741872	3300002560	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLTAGFAVAGVAQSVGGQAYSTYVNTPIGYSGPSPLA
JGI25382J37095_101182172	3300002562	Grasslands Soil	MNGNSMHWVXRLAXLGLVXGLVAGLAAXGNAQSVGGQAYSTYVNTPLGYS
JGI25382J37095_102766331	3300002562	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLTAGFAVAGVAQSVGGQAYSTYVNTPIGYSGPS
JGI25382J43887_102065902	3300002908	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLTAGFAVAGVAQSVGGQAYSTYVNTPVGYSGPSPLAV
JGI25382J43887_103146261	3300002908	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAAGNAQSVGGQAYSTYVNTPLGYSGQSPL
JGI25388J43891_10256741	3300002909	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPLA
JGI25389J43894_10666962	3300002916	Grasslands Soil	MNGKTKHWVNCLAVLGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPA
JGI25389J43894_10721991	3300002916	Grasslands Soil	MKAIKTLWVNRLAALGLVVGLTAGFSATSVAQSVAGQAYGTYVNTPVAASSQSPLA
Ga0066680_102557632	3300005174	Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGATAD
Ga0066680_102901841	3300005174	Soil	MNGKSMHWVNRLAVLGLVVGLTAGFAVAGVAQSVGGQAYSTYVNTPVGYSGPSPLAVLP
Ga0066679_100154743	3300005176	Soil	MNGKSMHWVNRLAALGLVVPLTAGLAVTGVAQSVGGQAYSTYVNTPVGYS
Ga0066679_103451491	3300005176	Soil	MKAIKTLWVNRLAALGLVVGLTAGFSATSVAQSVAGQAYGTYVNTPVAASSQSPLAVLPAIS
Ga0066685_101688271	3300005180	Soil	MNGNSMHWVNRLAVLGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLP
Ga0066685_103855251	3300005180	Soil	MNGNSMHWVNRLAALGLVVGLVAGLAGVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGA
Ga0066685_104369591	3300005180	Soil	MNGKSKHWVNRLAALGLVVGLVAGFAAVGSAQSVGGQAYSTYVNTPL
Ga0066678_104232982	3300005181	Soil	MNRMSMLWVNRFVAPALVVGLTTGLAAAGVAQSVGGQAYGTYVNTPAGFSTRSPLAVLPAIS
Ga0066678_104842202	3300005181	Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSS
Ga0066676_104951501	3300005186	Soil	MNGNSMHRVNRLAAFGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLP
Ga0066686_103757301	3300005446	Soil	MNGNSMHWVNRLAALGLVVGLVAGLAGVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDG
Ga0066682_107259692	3300005450	Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAAGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGA
Ga0066701_107362212	3300005552	Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPLAVLP
Ga0066661_101209763	3300005554	Soil	MNGKSMHWVSGLAVLGVAVGLTAGFAVAGAAQSVSGKAYSTYVNTPLGSSG
Ga0066704_101248631	3300005557	Soil	MKLMRMNWVSRLAALGLVVGLTAGVAAAGVAQSVSGQAYGVYANTPLGTMSQSPLAVLPATSGTDGN
Ga0066704_102883181	3300005557	Soil	MNGKSMHWVNRLAALGLVVGLTAGFAVAGVAQSVGGQAYSTYVNTPVGYSGPSPLAVLPAISG
Ga0066704_104487812	3300005557	Soil	MNGKSMYWVNRLAALGLVVGLTAGLAVTGVAQSVGGQAYSTYVNTPVGYSGPSPLAVLPAISGADGAE
Ga0066700_102687552	3300005559	Soil	MNRMTMHWVNRLAGVGLVVGLTAAVAVAGVAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVSGTD
Ga0066670_107310471	3300005560	Soil	MNGKTKHWVSRLAVLGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVSGTDGAEADAEGSAL
Ga0066705_106431801	3300005569	Soil	MNGKTMHWVNRLAVLGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVSGTDGA
Ga0066694_101197031	3300005574	Soil	MNGNSMHWVNRLAALGLVFGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSP
Ga0066708_100441383	3300005576	Soil	MNGKSMHWVSGLAVLGVAVGLTAGFAVAGAAQSVSGKAYSTYVNTPLGSSGYSPLAVLPPVSGTDGAEADAAG
Ga0066708_104735182	3300005576	Soil	MNSKSMHWVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQ
Ga0066691_103768781	3300005586	Soil	MNGKSMHWVNRLAALGLVVPLTAGLAVTGVAQSVGGQAYSTYVNTPVGYSGPSPLAVLPAISGTDGA
Ga0066691_104294191	3300005586	Soil	MNGKSMHWVNRLAALGLVVGLTAGFAVAGVAQSVGGQAYSTYVNTPVGYSGPSPLAVLPAISGTDGA
Ga0066651_100584913	3300006031	Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPLAVLPAVSGTDGAEADAEG
Ga0066652_1006518391	3300006046	Soil	MNGNSMHWVNRLAVLGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQS
Ga0079222_114168351	3300006755	Agricultural Soil	MNGNSMHWVNRLAAFGLVVGLVAGLAAAGSAQSVGGQAYATYVNTPLGYSGQSPVA
Ga0066659_101808281	3300006797	Soil	MNGKSMHWVNRLAALGLVVGLVAGLASAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLP
Ga0066659_118366871	3300006797	Soil	MNGNSMHRVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSS
Ga0066660_112130782	3300006800	Soil	MNGKTMHWVNRLAVLGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSSQSPLAVLPAVSGTDGAEADAGG
Ga0079219_100840563	3300006954	Agricultural Soil	MNRMSMLWVNRFVAPALVVGLTTGLAAAGVAQSVGGQAYGTYVNTPAGFSTRSPLAVLPAISGTDGAEAD
Ga0079219_118277451	3300006954	Agricultural Soil	MNSNSMHWVNRLAALGLVVGLVAGLAPVGVAQTVGGQAYSTYVNTPLGSSGQSPLAVLPAVSGTDGAMADAEGSA
Ga0099793_100978481	3300007258	Vadose Zone Soil	MNGNSMHWVNRLAALGLVLGLVAGLAAAGNAQSVGGQAYSTYVNTPLGSSGQSPLAVLPTVTGTDGAEADAAGSA
Ga0066710_1006722881	3300009012	Grasslands Soil	MNGKSMHWVSRLAVLGLAVGLTAEFAVAGAAQSVSGKAYSTYVNTPLGSSGYSPLAVLPPVSG
Ga0099830_104783491	3300009088	Vadose Zone Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVS
Ga0099827_113122051	3300009090	Vadose Zone Soil	MNAIKTHWVNRLAALGLVSGLTAGFAAAGVAQSVAGQAYGAYANTPTGSVSQSPLAVLPFISGTDGDMANA
Ga0066709_1015321012	3300009137	Grasslands Soil	MNGKSMHWVSRLAVLGLAVGLTAGFAVAGAAQSVSGKAYSTYVNTPLGSSGYSPLAV
Ga0127487_1169881	3300010078	Grasslands Soil	MNGKSMHWVNRLAAFGLVVGLVAGLAAAGNAQSVGGQAYSTYVNTPLGYSGQ
Ga0127445_10365212	3300010085	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGAMADAEGSALN
Ga0127446_10600181	3300010104	Grasslands Soil	MNGKSMHWVSRLAVLGLAVGLTAGFAVAGAAQSVSGRAYSTYVNTPL
Ga0127470_10427391	3300010105	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPLAVLPAVS
Ga0127474_10169392	3300010108	Grasslands Soil	MNGKSMHWVSRLAVLGLAVGLTAGFAVAGAAQSVSGRAYSTYVNTPLGSS
Ga0127491_10266092	3300010111	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPL
Ga0127449_10966692	3300010117	Grasslands Soil	MNGKSMHWVSRLAVLGLAVGLTAGFAVAGAAQSVSGRAYSTYVNTPLGSSGYSPLAVLPAVSGTDGAEADAQGDALNV
Ga0127449_11252401	3300010117	Grasslands Soil	MNGKSMHWVNRLAAFGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTD
Ga0127452_10097202	3300010119	Grasslands Soil	MNGNSMHWVNRLAALGLVVGLVAGLAGVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGAMADAEGSAL
Ga0127452_10334502	3300010119	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSG
Ga0127488_10226791	3300010122	Grasslands Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGYSGQSPL
Ga0127488_11343251	3300010122	Grasslands Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAAGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVS
Ga0127482_11131951	3300010126	Grasslands Soil	MNRMTMHWVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVTGTDGAEADA*
Ga0127489_11747451	3300010127	Grasslands Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGAT
Ga0127459_10252712	3300010133	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGA
Ga0127484_11021841	3300010134	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGAMADAEGSA
Ga0134082_102302152	3300010303	Grasslands Soil	MNSKSMHWVNRLAALGLVAGLVAGLAAGGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLP
Ga0134088_104881892	3300010304	Grasslands Soil	MNGKSMHWVNRLAALGLVIGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVSGTD
Ga0134109_100052381	3300010320	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGS
Ga0134067_102245232	3300010321	Grasslands Soil	MNSKSMHWVNRLAALGLVAGLVAGLAAGGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVSGTDGAEADAEGSALN
Ga0134064_100304771	3300010325	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSS
Ga0134064_102018442	3300010325	Grasslands Soil	MNGNSMHWVNRLAVLGLVVGLVAGLAAAGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPA
Ga0134111_100391813	3300010329	Grasslands Soil	MNGNSMHRVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGS
Ga0134080_101877002	3300010333	Grasslands Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSP
Ga0134080_102428792	3300010333	Grasslands Soil	MNGKSMHWVSGLAVLGIAVGLTAGFAVAGAAQSVSGKAYSTYVNTPLGSSG
Ga0134062_104204272	3300010337	Grasslands Soil	MNGKTMHWVNRLAVLGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSSQSPLAVLPPVSGTDGAEADAEGS
Ga0138112_10924591	3300010905	Grasslands Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDG
Ga0137383_103866252	3300012199	Vadose Zone Soil	MNGKSMHWVNHLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSA
Ga0137383_104638942	3300012199	Vadose Zone Soil	MNGKSMHWVNRLAVLGLIGGLGAGLGAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLP
Ga0137382_104336921	3300012200	Vadose Zone Soil	MNRKTMHWVNRLAVLGLVVGLVAGLAAGGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVSGTDGAEADAEGSALN
Ga0137365_104752422	3300012201	Vadose Zone Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPMAVLPAVSGTDGAEA
Ga0137399_107719642	3300012203	Vadose Zone Soil	MNGKNIRWVHRLAVLGLVVWLVAGLAAAGSAQSVGGQAYSTYVNTPLGYSGQSPLA
Ga0137381_104478111	3300012207	Vadose Zone Soil	MNGKTMHWVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSSQSPLAVL
Ga0137379_112591202	3300012209	Vadose Zone Soil	MNGNSMHWVNRLATLGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPA
Ga0137378_104074743	3300012210	Vadose Zone Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQ
Ga0137377_103310202	3300012211	Vadose Zone Soil	MNGKSMHWVNHLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGATADAEG
Ga0137377_118116332	3300012211	Vadose Zone Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGATADAEG
Ga0137370_102267322	3300012285	Vadose Zone Soil	MNGNSMHWVNRLAALGLVFGLVAGLAAVGSAQSVGGQAYSTYVNTPLGYSGQSP
Ga0137387_100576511	3300012349	Vadose Zone Soil	MNGNSMHRVNRLAALGLVVGLTAGFAVAGVAQSVGGQAYSTYVNTPVGYSGPSPLAVLPAISGT
Ga0137387_108784822	3300012349	Vadose Zone Soil	MNGNSMHWVNRLATLGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQ
Ga0137387_110178572	3300012349	Vadose Zone Soil	MNGKSMHWVSRLAVLGVAVGLTTGFAVASAAQSVSGQAYSTYVNTPLGSSGYSPLAVLPPVSGTDGAEADAAGSALNVA
Ga0137372_101958111	3300012350	Vadose Zone Soil	MNGKSMHWVSRLAVLGLAVGLTAGFAVAGAAQSVSGQAYSTYVNTPLGSSGYSPLA
Ga0137386_104326841	3300012351	Vadose Zone Soil	MKAIKTLWVNRLAALGLVVGLTAGFSATSVAQSVAGQAYGTYVNTPVAASGQSPLAVLPAISGT
Ga0137386_104564921	3300012351	Vadose Zone Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGYSGQSPMAV
Ga0137386_108866672	3300012351	Vadose Zone Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTSVTTPLGYSAQSPLAVLPAVSGTDGAEADA
Ga0137366_102305433	3300012354	Vadose Zone Soil	MNGKTMHWVNRLAAIGLVVGLVAGVTAAGSAQSVGGQAYSTYVNTPLG
Ga0137371_109047392	3300012356	Vadose Zone Soil	MNGNSMHRVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVSRFCCAEADA*
Ga0137384_113352452	3300012357	Vadose Zone Soil	MNRMKMHWVNRLAVLGLVVGLTAGFAVAGVAQSVAGQAFGTYVNTPLASSGQSPLAVLPAVSGTDGAEADAEGSTQ
Ga0137385_102646241	3300012359	Vadose Zone Soil	MNGKSMHWVNRLAALGLVLAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPMAV
Ga0134032_12369572	3300012376	Grasslands Soil	MNGKSMHWVNRLAVLGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVS
Ga0134047_11833062	3300012380	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGAMADAEGSAL
Ga0134023_11154322	3300012385	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDG
Ga0134046_10431111	3300012386	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPMAVLPAVSGTDGAE
Ga0134043_10426982	3300012392	Grasslands Soil	MNGNSMHWVNRLAALGLVVGLVAGLAGVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSG
Ga0134044_11827411	3300012395	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSP
Ga0134051_13668672	3300012398	Grasslands Soil	MNGNSMHWVNRLAALGLVFGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSG
Ga0134048_13703412	3300012400	Grasslands Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGAMADAEGSAL
Ga0137373_101397012	3300012532	Vadose Zone Soil	MNSKSMHWVNRLAALGLIVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAV*
Ga0137359_105390871	3300012923	Vadose Zone Soil	MNGKNMHRVNRLGALWLLVALVAGLAAAGSAQSVGGQAYSTYVNTPLGSSAQS
Ga0137419_108700172	3300012925	Vadose Zone Soil	MNGKSMHWVNRLGALGLVVGLVAGLAVAGHAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVSGTDGAEADAAG
Ga0137416_108135402	3300012927	Vadose Zone Soil	MKVMRMHGANRFATLGLVVGLTAGFATTGVTQSVSGRAYGAYVNTPLGAVSQSPLAVLPSISISGI
Ga0137407_103539633	3300012930	Vadose Zone Soil	MNGKSMHWVNRLAALGLGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPMAVLPAVSGTDGAE
Ga0134077_104380542	3300012972	Grasslands Soil	MNGNSMHWVNRLAALGLVVGLVAGLAGVGNAQSVGGQAYSTYVNTPLGY
Ga0134110_101121721	3300012975	Grasslands Soil	MNGKSMHWVSGLAVLGIAVGLTAGFAVAGAAQSVSGKAYSTYVNTPLGSSGYSPLA
Ga0134087_102456492	3300012977	Grasslands Soil	MNGKTMHWVNRLAVLGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVLPAVSGTDGAEADAEGSAL
Ga0137409_105552851	3300015245	Vadose Zone Soil	MNSKSMHWVNRLAALGLVAGLAAAGSAQAQSVGGQAYSTYVNTPLG
Ga0134112_101975761	3300017656	Grasslands Soil	MNGNSTHWVNRLAALALVVGLVAGLVAAGNAQSVGGQAYSTYVNTPLGYSSQSPLAV
Ga0134083_101305271	3300017659	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLA
Ga0209236_10952921	3300026298	Grasslands Soil	MNGNSMHWVNRLAALGLVIGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYS
Ga0209688_10743162	3300026305	Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPL
Ga0209761_10669881	3300026313	Grasslands Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPMAVLPSVSGTDGAEADAE
Ga0209266_11508392	3300026327	Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSSQSPLAVLPGVTGTDGAEADAEG
Ga0209802_11575992	3300026328	Soil	MNGKTMHWVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSSQSPLAVLPT
Ga0209375_10038539	3300026329	Soil	MNGNSMHRVNRLAALGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSGQSPLAVL
Ga0209158_12378101	3300026333	Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGS
Ga0209057_11182911	3300026342	Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLA
Ga0209160_11911431	3300026532	Soil	MKLMRMNWVSRLAALGLVVGLTAGVAAAGVAQSVSGQAYGVYANTPLGTMSQSPLAVLPATSGTDGNIATG
Ga0209160_12665771	3300026532	Soil	MNGKSMHWVNRLAALGLVVGLVAGLASAGSAQSVGGQAYSTYVNTPLGSSGQSPLA
Ga0209157_10634161	3300026537	Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGNAQSVGGQAYSTYVNTPLGYSGQSPLAVLPAVSGTDGAM
Ga0209056_103262091	3300026538	Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPMAVLPAVSGTDGAEADA
Ga0209156_101796052	3300026547	Soil	MNDKSMHWVNRLAALGLVVGLVAGLAVAGSAQSVGGQAYSTYVNTPLGSSSQSPLAVLPAVTGT
Ga0209161_101004423	3300026548	Soil	MNGKSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPLAVLPAVSGTDGAEAD
Ga0209577_102057503	3300026552	Soil	MNGKTMHWVNRLAVLGLVVGLVAGLAAAGSAQSVGGQAYSTYVNTPLGSSSQSPLAVLPAVSGTDG
Ga0209076_10543481	3300027643	Vadose Zone Soil	MNGNSMHWVNRLAALGLVLGLVAGLAAAGNAQSVGGQAYSTYVNTPLGYSGQS
Ga0209689_11031553	3300027748	Soil	MNGKTMHWVNRLAVLGLVVGLVAGFAAVGSAQSVGGQAYSTYVNTPLGSSGQ
Ga0209701_103618182	3300027862	Vadose Zone Soil	MNGNSMHWVNRLAALGLVVGLVAGLAAVGSAQSVGGQAYSTYVNTPLGSSAQSPMAVLPAVS
Ga0209590_107946101	3300027882	Vadose Zone Soil	MNAIKTHWVNRLAALGLVSGLTAGFAAAGVAQSVAGQAYGAYANTPTGSVSQSPLAVLPF
Ga0137415_106584592	3300028536	Vadose Zone Soil	MKVMRMHGANRFATLGLVVGLTAGFATTGVTQSVSGRAYGAYVNTPLGAVSQSPLAVLPSISISGIDG
Ga0326597_105443053	3300031965	Soil	MKLMRTHWVNRLAALGLVVGLTVGFSAVGVAQSVSGTAYGAYVNTPAGSLAQSPLATLPYTTAPEGNMATASA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056503

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences