NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F056500

Metagenome / Metatranscriptome Family F056500

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F056500
Family Type Metagenome / Metatranscriptome
Number of Sequences 137
Average Sequence Length 40 residues
Representative Sequence MSDRIRCACRRCTIRGLMGPAVIITVGVLFLLDQMRGGDF
Number of Associated Samples 113
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 99.27 %
% of genes from short scaffolds (< 2000 bps) 90.51 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(23.358 % of family members)
Environment Ontology (ENVO) Unclassified
(27.007 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.774 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 39.71%    β-sheet: 0.00%    Coil/Unstructured: 60.29%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 137 Family Scaffolds
PF00643zf-B_box 12.41
PF08281Sigma70_r4_2 6.57
PF13490zf-HC2 3.65
PF05154TM2 2.19
PF00174Oxidored_molyb 0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 137 Family Scaffolds
COG2314Uncharacterized membrane protein YozV, TM2 domain, contains pTyrGeneral function prediction only [R] 2.19
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.73
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.73

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_104379633All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia615Open in IMG/M
3300002245|JGIcombinedJ26739_100172642All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2045Open in IMG/M
3300002245|JGIcombinedJ26739_101151498All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae664Open in IMG/M
3300002914|JGI25617J43924_10228689All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae623Open in IMG/M
3300004080|Ga0062385_10121195All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1304Open in IMG/M
3300004101|Ga0058896_1170127All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300005177|Ga0066690_10188494All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1369Open in IMG/M
3300005178|Ga0066688_10816788All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300005186|Ga0066676_10718177All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae680Open in IMG/M
3300005437|Ga0070710_10947791All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300005454|Ga0066687_10441334All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter760Open in IMG/M
3300005553|Ga0066695_10554159All Organisms → cellular organisms → Bacteria → Acidobacteria698Open in IMG/M
3300005560|Ga0066670_10776452All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae580Open in IMG/M
3300005561|Ga0066699_10649616All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae756Open in IMG/M
3300005568|Ga0066703_10341592All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter901Open in IMG/M
3300005575|Ga0066702_10648867All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300005586|Ga0066691_10477754All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300005591|Ga0070761_10499818All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300005598|Ga0066706_10149546All Organisms → cellular organisms → Bacteria → Acidobacteria1755Open in IMG/M
3300005602|Ga0070762_10800634All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae638Open in IMG/M
3300006046|Ga0066652_101885251All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7537Open in IMG/M
3300006755|Ga0079222_11666927All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7609Open in IMG/M
3300006755|Ga0079222_11693350All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7606Open in IMG/M
3300007076|Ga0075435_100358888All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1250Open in IMG/M
3300007076|Ga0075435_101007567All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300007258|Ga0099793_10402170All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7673Open in IMG/M
3300009089|Ga0099828_11186835All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7677Open in IMG/M
3300009090|Ga0099827_10126907All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_42061Open in IMG/M
3300009090|Ga0099827_11566708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7574Open in IMG/M
3300009643|Ga0116110_1181636All Organisms → cellular organisms → Bacteria → Acidobacteria687Open in IMG/M
3300010048|Ga0126373_12104316All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7626Open in IMG/M
3300010358|Ga0126370_10624535All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300010358|Ga0126370_12163058All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300010360|Ga0126372_12539329All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300010362|Ga0126377_10710031All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300010376|Ga0126381_101843314All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300010398|Ga0126383_12574776All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300010866|Ga0126344_1298234All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300011120|Ga0150983_14103435All Organisms → cellular organisms → Bacteria → Acidobacteria2111Open in IMG/M
3300011269|Ga0137392_11284219All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7591Open in IMG/M
3300012096|Ga0137389_11244649All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300012189|Ga0137388_10128445All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_42217Open in IMG/M
3300012202|Ga0137363_10667777All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7879Open in IMG/M
3300012202|Ga0137363_11052287All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7691Open in IMG/M
3300012207|Ga0137381_10913343All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7759Open in IMG/M
3300012209|Ga0137379_10351862All Organisms → cellular organisms → Bacteria1383Open in IMG/M
3300012351|Ga0137386_10999884All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300012359|Ga0137385_10221429All Organisms → cellular organisms → Bacteria1646Open in IMG/M
3300012363|Ga0137390_10107608All Organisms → cellular organisms → Bacteria2757Open in IMG/M
3300012363|Ga0137390_11076654All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300012582|Ga0137358_10338148All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_71020Open in IMG/M
3300012683|Ga0137398_10805420All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300012927|Ga0137416_11737079All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7569Open in IMG/M
3300012929|Ga0137404_10118825All Organisms → cellular organisms → Bacteria → Acidobacteria2158Open in IMG/M
3300012930|Ga0137407_11041579All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300012930|Ga0137407_11332818All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7682Open in IMG/M
3300015359|Ga0134085_10206167All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300016294|Ga0182041_10719434All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300017961|Ga0187778_10206008All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1254Open in IMG/M
3300018044|Ga0187890_10701825All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300018085|Ga0187772_10194816All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300018090|Ga0187770_11086864All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300018431|Ga0066655_10718256All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7677Open in IMG/M
3300018433|Ga0066667_11940086All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300020579|Ga0210407_10484935All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7966Open in IMG/M
3300020579|Ga0210407_10818610All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300020579|Ga0210407_10971591All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300020579|Ga0210407_11161983All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae582Open in IMG/M
3300020579|Ga0210407_11414677All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7515Open in IMG/M
3300020580|Ga0210403_10217518All Organisms → cellular organisms → Bacteria1568Open in IMG/M
3300020583|Ga0210401_10414044All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300020583|Ga0210401_10900615All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7744Open in IMG/M
3300021046|Ga0215015_10144735All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300021170|Ga0210400_10036661All Organisms → cellular organisms → Bacteria3800Open in IMG/M
3300021170|Ga0210400_11071279All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7653Open in IMG/M
3300021171|Ga0210405_10102671All Organisms → cellular organisms → Bacteria → Acidobacteria2257Open in IMG/M
3300021171|Ga0210405_10540054All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7911Open in IMG/M
3300021171|Ga0210405_10607233All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300021178|Ga0210408_10062249All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2916Open in IMG/M
3300021403|Ga0210397_11089519All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300021405|Ga0210387_10864711All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300021406|Ga0210386_10120087All Organisms → cellular organisms → Bacteria → Acidobacteria2173Open in IMG/M
3300021432|Ga0210384_11172795All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300021474|Ga0210390_11253668All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7596Open in IMG/M
3300021559|Ga0210409_10863920All Organisms → cellular organisms → Bacteria → Acidobacteria778Open in IMG/M
3300022508|Ga0222728_1019543All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7970Open in IMG/M
3300022532|Ga0242655_10290734All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7529Open in IMG/M
3300022533|Ga0242662_10244806All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300022717|Ga0242661_1086247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7639Open in IMG/M
3300022722|Ga0242657_1128489All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7650Open in IMG/M
3300022722|Ga0242657_1239129All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7516Open in IMG/M
3300022724|Ga0242665_10049103All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300022726|Ga0242654_10437139All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7508Open in IMG/M
3300022840|Ga0224549_1028600All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300024271|Ga0224564_1123050All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7532Open in IMG/M
3300025910|Ga0207684_11582029All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300025933|Ga0207706_11523091All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7545Open in IMG/M
3300025939|Ga0207665_10832204All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300025961|Ga0207712_12006310All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis518Open in IMG/M
3300026297|Ga0209237_1275671All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7516Open in IMG/M
3300026304|Ga0209240_1117125All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7918Open in IMG/M
3300026304|Ga0209240_1296022All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300026316|Ga0209155_1073931All Organisms → cellular organisms → Bacteria → Acidobacteria1283Open in IMG/M
3300026319|Ga0209647_1179437All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300026334|Ga0209377_1083288All Organisms → cellular organisms → Bacteria1355Open in IMG/M
3300026334|Ga0209377_1130240All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7993Open in IMG/M
3300026494|Ga0257159_1061212All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300026514|Ga0257168_1063817All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7812Open in IMG/M
3300026538|Ga0209056_10157552All Organisms → cellular organisms → Bacteria → Acidobacteria1727Open in IMG/M
3300027587|Ga0209220_1121621All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300027629|Ga0209422_1070323All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300027660|Ga0209736_1181000All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300027663|Ga0208990_1105641All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300027725|Ga0209178_1317179All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300027862|Ga0209701_10316436All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7892Open in IMG/M
3300027862|Ga0209701_10478428All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7680Open in IMG/M
3300027862|Ga0209701_10729607All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300027874|Ga0209465_10575741All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300027875|Ga0209283_10917194All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7528Open in IMG/M
3300027882|Ga0209590_10663877All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300027903|Ga0209488_10421000All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300027903|Ga0209488_10440444All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7960Open in IMG/M
3300030589|Ga0210255_10438536All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_71167Open in IMG/M
3300031057|Ga0170834_112903517All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300031122|Ga0170822_11356419All Organisms → cellular organisms → Bacteria1929Open in IMG/M
3300031231|Ga0170824_121320931All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300031231|Ga0170824_121708752All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7639Open in IMG/M
3300031708|Ga0310686_112958229All Organisms → cellular organisms → Bacteria → Acidobacteria1260Open in IMG/M
3300031720|Ga0307469_10039640All Organisms → cellular organisms → Bacteria2846Open in IMG/M
3300031720|Ga0307469_10747324All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7892Open in IMG/M
3300031748|Ga0318492_10101633All Organisms → cellular organisms → Bacteria1413Open in IMG/M
3300031753|Ga0307477_10423191All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300031820|Ga0307473_10522287All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_7805Open in IMG/M
3300031962|Ga0307479_11236525All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae709Open in IMG/M
3300032180|Ga0307471_100531304All Organisms → cellular organisms → Bacteria → Acidobacteria1328Open in IMG/M
3300032205|Ga0307472_100079363All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_42177Open in IMG/M
3300033547|Ga0316212_1001286All Organisms → cellular organisms → Bacteria3399Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.36%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.44%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.68%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.11%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.11%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.11%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.19%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.19%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.19%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.19%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.46%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.46%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.73%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.73%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.73%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.73%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.73%
RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Roots0.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.73%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.73%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.73%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004101Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022840Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5EnvironmentalOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300030589Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR019SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033547Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10437963323300000364SoilMSDKIRCSCRRCTIRSLMGPAVITTVGILFLLGQW
JGIcombinedJ26739_10017264213300002245Forest SoilMSDRIRCACRRCTIRGLMGPAVIITVGVLFLLDQMRGGDFS
JGIcombinedJ26739_10115149823300002245Forest SoilMSDRIRCSCRRCTIRSLMGPAVVITVGMLFLLEQT
JGI25617J43924_1022868913300002914Grasslands SoilMSDRIRCTCRRCTIRSLMGPAVVITIGLLFLLDQLRGGDFSFRNTYPII
Ga0062385_1012119513300004080Bog Forest SoilMRDDVTARCKCPRCTIRSLRGPAVLITLGVLFLLDQTHGSYF
Ga0058896_117012713300004101Forest SoilMSDRIRCACRRCTIRSLMGPAIIITVGVLFLLDQVRGGNFSFENTYP
Ga0066690_1018849433300005177SoilMSDRIRCTCRRCTIRGLMGPAIIITVGVLFLFDQMRGGYLSFGNT
Ga0066688_1081678823300005178SoilMSDRIRCACRRCTIRGLTGPAVIITVGVLFLLDQMRGGDFSFGNTYP
Ga0066676_1071817723300005186SoilMSDRIRCGCRRCMIRGLMGPAVIIAVGVLFLLDQMRSGYFSFG
Ga0070710_1094779113300005437Corn, Switchgrass And Miscanthus RhizosphereMANEIRCRCPRCTIRGLMGPAVLITIGVLFLLHEVRGDIFDFS
Ga0066687_1044133423300005454SoilMSNRSGCHCPRCTIRGLMGPAVLITIGVLFLLHEVRGNVFDFSNT
Ga0066695_1055415923300005553SoilMSDRVRCNCQRCTIRSLMGPGILITVGILFLLDQVRGGHFSFG
Ga0066670_1077645213300005560SoilMSDGVRCNCRRCMIRGLMGPAVVITVGVLFLLDQV
Ga0066699_1064961623300005561SoilMSMSHRVRCNCHRCVIRGLMGPAVVVTVGVLFLLD
Ga0066703_1034159213300005568SoilMSDRIRCACRRCTIRSVMGPAVIITVGLLFLLDQMRGGFLSFSNTFPII
Ga0066702_1064886723300005575SoilMSDPIRCACRRCTIRGLMGPAVIITVGVLFLLDQMRG
Ga0066691_1047775413300005586SoilMSDRVRCNCQRCTIRSLMGPGILIAVGILFLLDQV
Ga0070761_1049981813300005591SoilMSDRVRCTCQRCSIRGLMGPVVVVTVGVLFLLAEMRGGYFDFGNTW
Ga0066706_1014954643300005598SoilMSDRVRCHCARCTIRGLMGPAVVITIGLLFLLQEMRGGYLGFD
Ga0070762_1080063423300005602SoilMSDNNPKCHCPRCTIRSLMGPAVIVTVGVLFLLQQMRGGYFDFG
Ga0066652_10188525123300006046SoilMSDRIRCACRRCTIRGLMGPAVIITVGVLFLLDQMRGGDFSFGNTY
Ga0079222_1166692723300006755Agricultural SoilMSNDVRCRCPRCTIRGLLGPAVIITVGVLFLLHEVRGGYFDFSN
Ga0079222_1169335023300006755Agricultural SoilMSYQGHCKCQRCTTRGLMGPVIVVTVGVLFLLAEIRGG
Ga0075435_10035888813300007076Populus RhizosphereVSDRVRCHCQRCTIRGLMGPAIIITLGVLFLLDQVRGGYF
Ga0075435_10100756723300007076Populus RhizosphereMSNQPRCTCTRCTIRGLMGPAIITTLGVLFLLSELRGG
Ga0099793_1040217013300007258Vadose Zone SoilMSDRVRCACRSCTIRGLMGPAIIITVGVLFLLDQTSSGN
Ga0099828_1118683523300009089Vadose Zone SoilMSNEIRCRCPRCTIRSLMGPAVVITVGVLFLLHEMRG
Ga0099827_1012690713300009090Vadose Zone SoilMSERVRCACRQCTIRGLMGPAVIITVGVLFLLDQTSS
Ga0099827_1156670823300009090Vadose Zone SoilMSAHIRCACRRCTIRGLMGPAVIITVGVLFLLDQTRSG
Ga0116110_118163623300009643PeatlandMSDKIRCQCKRCTIGGLMGPVVLITIGVLFLLDQMV
Ga0126373_1210431623300010048Tropical Forest SoilMSEQLRCRCARCTIRGLLGPAVVITIGVLFLLQQTRGG
Ga0126370_1062453513300010358Tropical Forest SoilMSDRVRCNCRRCTIRSLMGPAVVITIGVLFLLDQMR
Ga0126370_1216305813300010358Tropical Forest SoilMSNGVRCNCSRCTIRSLMGPAVIITVGVLFLLDQV
Ga0126372_1253932923300010360Tropical Forest SoilMSNRVRCNCQRCTIRSLMGPAVVITVGVLFLLDQMRGEFF
Ga0126377_1071003133300010362Tropical Forest SoilMSDKIRCTCRRCTIRGLMGPAIITTIGILFLLGEFHR
Ga0126381_10184331423300010376Tropical Forest SoilMSDRVRCNCRRCMIRGLMGPAIIITVGVLFLLDQM
Ga0126383_1257477613300010398Tropical Forest SoilMSDKIRCTCRRCTIRGLMGPAVITTIGILFLLGEFHGGLSF
Ga0126344_129823423300010866Boreal Forest SoilMSDRIRCNCRRCTIRSLMGPAVIITVGILFLLEQTRSGFSFG
Ga0150983_1410343513300011120Forest SoilMSDRIRCTCQRCSIRGLMGPVIVVTVGVLFLLQEMRGGYFDFGNTYP
Ga0137392_1128421913300011269Vadose Zone SoilMSNEIRCRCPRCTIRGLMGPAVIITIGVLFLLHEMRNGY
Ga0137389_1124464913300012096Vadose Zone SoilMSNRIHCACRRCTIRGLMGPAILITIGVLFLLDQM
Ga0137388_1012844543300012189Vadose Zone SoilMSDRIRCACRRCTIRGLMGPAVIITIGVLFLLDQTRSG
Ga0137363_1066777723300012202Vadose Zone SoilMSDRIRCACPQCTIRGLMGPAVIITVGVLFLLDQMRGGDF
Ga0137363_1105228723300012202Vadose Zone SoilMSNEIRCRCPRCTIRGLMGPAVIITIGVLFLLHEMRNGYFDFSN
Ga0137381_1091334313300012207Vadose Zone SoilMSDRIRCTCRRCTIRGLMGPAVIITVGVLFLLDQMR
Ga0137379_1035186213300012209Vadose Zone SoilMSNRIRCTCRRCTIRSLMGPAIIITVGVLFLLSEMRGGYFDFSN
Ga0137386_1099988413300012351Vadose Zone SoilMSAQVRCTCSRCTIRGLMGPAVITTLGILFLLNELRHGYFS
Ga0137385_1022142943300012359Vadose Zone SoilMSDRVRCNCRRCMIRGLMGPAVVITVGVLFLLDQVRGGY
Ga0137390_1010760813300012363Vadose Zone SoilMSTQPRCTCSRCTIRGLMGPAVITTLGVLFLLSEL
Ga0137390_1107665413300012363Vadose Zone SoilMSDRIRCSCRRCTIRSLMWPAIIITIGILFLLSGV
Ga0137358_1033814833300012582Vadose Zone SoilMSDRIRCACRRCTIRGLMGPAVIITVGVLFLLDQMRGGDF
Ga0137398_1080542013300012683Vadose Zone SoilMSERIRCACRRCTIRSLMGPAVIITVGLLFLLDQM
Ga0137416_1173707923300012927Vadose Zone SoilMSDRIRCACRRCTIRGLMGPAVIITVGVLFLLDQMRAGD
Ga0137404_1011882513300012929Vadose Zone SoilMANKSGCRCPRCTIRGLMGPAVLITIGVLFLLHEV
Ga0137407_1104157913300012930Vadose Zone SoilMSNRIRCACRRCTIRSLMGPAVIITVGLLFLLDQMRGGFLS
Ga0137407_1133281813300012930Vadose Zone SoilMSDQTRCRCGRCTIRALLGPAVIITVGVLFLLQQARGGY
Ga0134085_1020616713300015359Grasslands SoilMSNRIRCTCRRCTIRSLMGPAIIITLGVLFLLSEMRGGY
Ga0182041_1071943413300016294SoilMADRNRVRCTCPRCTIRGLMGPAIIVTIGILLLLGETRGGYFD
Ga0187778_1020600813300017961Tropical PeatlandMSNRIRCNCRRCTIRSLLGPAVVITVGVLFLLDQMRGGYASFSNTW
Ga0187890_1070182513300018044PeatlandMPDNPDYRCKCPRCTIRSLRGPAVIITLGVLFLLQEMRGDFFS
Ga0187772_1019481633300018085Tropical PeatlandMSNRVRCNCRRCTIRGLLGPAVLITLGVLFLLDQMRGGYFSFG
Ga0187770_1108686423300018090Tropical PeatlandMSDAVRCHCQRCTVRGLMGPAVLITIGVLFLMHQLH
Ga0066655_1071825613300018431Grasslands SoilMSNDLRCRCPRCTIRGLLGPAVIITVGVLFLLHQARGGSFD
Ga0066667_1194008623300018433Grasslands SoilMSTQLRCTCRRCTIRGFMGPAVITTLGVLFLLNELRHGALSF
Ga0210407_1048493513300020579SoilMSDRIRCTCQRCSIRGLMGPVVVVTVGVLFLLAEMRGGY
Ga0210407_1081861013300020579SoilMSNEIRCRCPRCTIRGLMGPAVIVTIGVLFLLHEMRNGYFDFSNTW
Ga0210407_1097159113300020579SoilMSDRVRCSCRRCTIRSLMGPAILITIGILFLLSEVEGGNF
Ga0210407_1116198313300020579SoilMSNGIRCRCPRCTIRGLMGPAVIVTVGVLFLLHEARGDVFDFSNTYP
Ga0210407_1141467723300020579SoilMSNRIRCTCQRCNIRGLMGPVIVVTVGVLFLLQEMRG
Ga0210403_1021751813300020580SoilMSDQVRCRCARCTIRALLGPAVIITIGVLFLLQQARGGYFDFG
Ga0210401_1041404413300020583SoilMSDKVSCNCRRCTIRGLMGPAILITIGILFLLGEIR
Ga0210401_1090061523300020583SoilMSDRVRCTCQRCTIRGLMGPVVVVTVGVLFLLAEMRGGYFDFSNTYPV
Ga0215015_1014473523300021046SoilMSDRIRCSCRRCTIRSLMGPAIIITIGVLFLLNETHG
Ga0210400_1003666173300021170SoilMANEIRCRCPRCTIRGLMGPAVLITIGVLFLLHEIRGDVFDFSN
Ga0210400_1107127923300021170SoilMSDRIRCACRRCTIRGLMGPAVIITVGVLFLIDQTRGGNFSFGTTY
Ga0210405_1010267143300021171SoilMSDQIRCRCSRCTIRALLGPAVIITIGVLFLLQQVRGGYFDFGNTYP
Ga0210405_1054005433300021171SoilMSDRIRCACRRCTIRSLMGPAIIITVGVLFLLDQVRG
Ga0210405_1060723313300021171SoilMSDQVRCRCARCTIRALMGPAVVITVGVLFLLQQARGGYFDF
Ga0210408_1006224953300021178SoilMSNRVRCACRRCTIRGLMGPAVIITVGVLFLLDQMSGGSFSFGNTYP
Ga0210397_1108951923300021403SoilMGNRIRCACPRCTIRSLMGPAIIITIGVLFLLDQMRGG
Ga0210387_1086471113300021405SoilMSDKIRCTCRRCTIRGLMGPAVITTIGVLFLLGQLAHGYL
Ga0210386_1012008713300021406SoilMADNPKCRCPRCTIRSLLGPAVIVTVGVLFLLQQMRGGYFDFGNTY
Ga0210384_1117279523300021432SoilMSDRIRCNCRRCTIRSLMGPAVIITVGVLFLLEQTRSGF
Ga0210390_1125366823300021474SoilMSDQVRCRCARCTIRALVGPAVIVTIGVLFLLQQARGGY
Ga0210409_1086392023300021559SoilMSDRIRCACRRCTIRSLMGPAIIITVGVLFLLDQVRGGNFSFENT
Ga0222728_101954313300022508SoilMSNRVRCACRRCTIRGLMGPAVIITVGVLFLLDQMSGGSFSFG
Ga0242655_1029073413300022532SoilMSDRIRCTCQRCTTRGLMGPVVVVTVGVLFLLAQMRGGFFDFGNTWP
Ga0242662_1024480613300022533SoilMGNRIRCACPRCTIRSLMGPAIIITIGVLFLLDQM
Ga0242661_108624713300022717SoilMSNRIRCTCQRCTIRGLMGPVIVVTIGVLFLLQEMRGGFFDF
Ga0242657_112848913300022722SoilMSDRIRCTCQRCSIRGLMGPVVVVTVGVLFLLAEMRGGYFDFGNTYP
Ga0242657_123912923300022722SoilMSDQVRCRCARCTIRALMGPAVVITVGVLFLLQQARGGYFDFGNTY
Ga0242665_1004910313300022724SoilMSDRIRCACRRCTIRSLMGPAIVITVGVLFLLSEM
Ga0242654_1043713923300022726SoilMSDRIRCTCQRCSIRGLMGPVVVVTVGVLFLLAEMRGGYFDFNNTY
Ga0224549_102860023300022840SoilMSDQNRCRCARCTIRGLMGPAVVITVGVLFLLQQMQDG
Ga0224564_112305013300024271SoilMSDRIRCTCQRCSIRGLMGPVVVVTVGVLFLLQEMRGGRFN
Ga0207684_1158202913300025910Corn, Switchgrass And Miscanthus RhizosphereMSAQVRCTCSRCTIRGLMGPAVITTLGILFLLNELRHGYFSFG
Ga0207706_1152309123300025933Corn RhizosphereMSDRVRCHCARCTIRGLMGPAVVITIGVLFLLQEVRGGY
Ga0207665_1083220413300025939Corn, Switchgrass And Miscanthus RhizosphereMSDKNRCTCRRCTIRGLMGPAVITTIGILFLLSEFRSG
Ga0207712_1200631023300025961Switchgrass RhizosphereMSDRVRCHCARCTIRGLMGPAVVITIGVLFLLQEVRGGYLGFDRCGCVRAFRK
Ga0209237_127567123300026297Grasslands SoilMSDRIRCTCRRCTIRGLMGPAVIITVGVLFLFDQMR
Ga0209240_111712533300026304Grasslands SoilMSDRIRCACRRCTIRSLMGPAIIITVGVLFLLDQMRGGNFSF
Ga0209240_129602223300026304Grasslands SoilMSDRIRCACPRCTIHGLMGPAVIITVGVLFLLDEMMHGGVF
Ga0209155_107393133300026316SoilMSDRIRCGCRRCMIRGLMGPAVIIAVGVLFLLDQM
Ga0209647_117943723300026319Grasslands SoilMSDRVQCTCRRCAIRSLMGPAVITTIGILLLLGEFFR
Ga0209377_108328833300026334SoilMSDRIRCTCRRCTIRGLMGPAIIITVGVLFLLDQMRGGYFSF
Ga0209377_113024033300026334SoilMSDRIRCACPQCTIRGLMGPAAIITVGVLFLLDQLRGGIFSFWNTAPVI
Ga0257159_106121223300026494SoilMSTQPRCTCSRCTIRGLMGPAIITTLGILFLLSEL
Ga0257168_106381723300026514SoilMSDRIRCACRRCTIRGLMGPAVIITVGVLFLLDQM
Ga0209056_1015755213300026538SoilMSAQVRCTCSRCTIRGLMGPAVITTLGILFLLNELRHGYLSFGHTF
Ga0209220_112162123300027587Forest SoilMSDRIRCNCRRCTIRSLMGPAVIITVGVLFLLEQTRSGFS
Ga0209422_107032323300027629Forest SoilMSDRIRCHCRRCTIRSLMGPAVIITVGILFLLEQTRS
Ga0209736_118100013300027660Forest SoilMSDRIRCNCRRCTIRSLMGPAVIITVGVLFLLEQTRSGFSFGQTWP
Ga0208990_110564113300027663Forest SoilMSNRIRCACRRCTIRSLMGPAVIITVGLLFLLDQMR
Ga0209178_131717913300027725Agricultural SoilMSDRVRCHCQRCTIRGLMGPAILVTLGVLFLLDQMRGGYFSF
Ga0209701_1031643633300027862Vadose Zone SoilMSDRVRCTCRRCTIRGLMGPAAIITVGVLFLLDQMRGGDF
Ga0209701_1047842813300027862Vadose Zone SoilMSDRIRCACRRCTIRGLMGPAVIITIGVLFLLDQTR
Ga0209701_1072960723300027862Vadose Zone SoilMSDRIRCVCRRCTIRGLSGPAVIITVGVPLLLGEMRGDNFSIW
Ga0209465_1057574113300027874Tropical Forest SoilMSDRVRCHCQRCTIRGLMGPAILVTLGVLFLLDQMRGGYFD
Ga0209283_1091719423300027875Vadose Zone SoilMSDRIRCACRRCTIRGLMGPAVIITVGVLFLLDQMRGGD
Ga0209590_1066387723300027882Vadose Zone SoilMSDRIRCVCRRCTIRGLSGPAVIITVGVLLLLGEMRGDNFSIWNT
Ga0209488_1042100013300027903Vadose Zone SoilMSNGIRCRCPRCTIRSLMGPAVVITVGVLFLLHEMRGGYF
Ga0209488_1044044433300027903Vadose Zone SoilMSNRIRCTCRRCTIRGLMGPAAIITVGVLFLLDQLRVGDFSF
Ga0210255_1043853613300030589SoilMSNRIRCTCQRCSIRGLMGPVIVVTVGVLFLLQEM
Ga0170834_11290351723300031057Forest SoilMSTQPRCTCSRCTIRGLMGPAVITTLGVLFLLSELAHGAF
Ga0170822_1135641913300031122Forest SoilMSTQPRCTCSRCTIRGLMGPAVITTLGVLFPLSELAHGAFSF
Ga0170824_12132093113300031231Forest SoilMSDRVRCQCRRCTIRSLMGPAVVITVGVLFLLEQTRSGFSFGQSWPIIL
Ga0170824_12170875223300031231Forest SoilMSDNPRCRCPRCTIRALVGPAVIVTVGVLFLLQQMRDG
Ga0310686_11295822933300031708SoilMDQPVRVQCTCTRCRLRGVMGPVVLITIGVLFLIQQF
Ga0307469_1003964053300031720Hardwood Forest SoilMADRVRCACPRCTIRGLMGPAIIITIGFLLLLDQMRG
Ga0307469_1074732413300031720Hardwood Forest SoilMSNRVHCTCQRCTIRGLMGPVIVVTVGVLFLLAEMRGGFFDFGNTYP
Ga0318492_1010163313300031748SoilMSNRVRCNCHRCVIRGLMGPAVVVTVGVLFLLDQLRGGYLSFGNTF
Ga0307477_1042319133300031753Hardwood Forest SoilMRNEIRCRCPRCTIRGLMGPAVIVTIGVLFLLHEVRGDAFDFSNT
Ga0307473_1052228713300031820Hardwood Forest SoilMSDRIRCACPQCTIRGLMGPAAIITVGVLFLLDQMRGGVFS
Ga0307479_1123652523300031962Hardwood Forest SoilMSNRLRCNCRRCVIRGLMGPAVVVTVGVLFLLDQLRGGYLAFGNTFPVI
Ga0307471_10053130413300032180Hardwood Forest SoilMSDRIRCACRRCTIRGFLGPAIVITIGVLLLLHEMRGGNFDITNTYP
Ga0307472_10007936313300032205Hardwood Forest SoilMSDRIRCACPQCTIRGLMGPAAIITVGVLFLLDQLRGGIFSFWNTAPVIL
Ga0316212_100128683300033547RootsMSDRIRCTCQRCSIRGLMGPVVVVTVGVLFLLAEM

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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