Metagenome / Metatranscriptome Family F056497

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056497
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	53 residues
Representative Sequence	MGGLQINYSSKLNVFAHYLLTSSAANFLLESNTHTLQGGIRLSLGSSKEGITERH
Number of Associated Samples	108
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.21 %
% of genes near scaffold ends (potentially truncated)	94.89 %
% of genes from short scaffolds (< 2000 bps)	89.78 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.270 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.117 % of family members)
Environment Ontology (ENVO)	Unclassified (35.036 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.255 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.60% β-sheet: 0.00% Coil/Unstructured: 49.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF02245	Pur_DNA_glyco	69.34
PF01244	Peptidase_M19	18.25
PF05635	23S_rRNA_IVP	6.57
PF12872	OST-HTH	1.46
PF13302	Acetyltransf_3	0.73
PF01936	NYN	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	69.34
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	18.25
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.27 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.27 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.27 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	33.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	33.58 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	20.44 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.44 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.44 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.44 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	2.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.44 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	1.46 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	20.44 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1.46 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Unclassified	root	N/A	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10220047	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300004156\|Ga0062589_101144932	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300004808\|Ga0062381_10173704	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005093\|Ga0062594_100866739	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005093\|Ga0062594_103352404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300005166\|Ga0066674_10490016	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300005172\|Ga0066683_10028552	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3195	Open in IMG/M
3300005186\|Ga0066676_10658474	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005341\|Ga0070691_10063998	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300005343\|Ga0070687_101314058	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	537	Open in IMG/M
3300005438\|Ga0070701_10030705	All Organisms → cellular organisms → Bacteria	2660	Open in IMG/M
3300005450\|Ga0066682_10050144	All Organisms → cellular organisms → Bacteria	2530	Open in IMG/M
3300005451\|Ga0066681_10974308	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005467\|Ga0070706_100194303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1896	Open in IMG/M
3300005468\|Ga0070707_100176623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	2082	Open in IMG/M
3300005468\|Ga0070707_100764419	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300005549\|Ga0070704_100097807	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300005549\|Ga0070704_100900824	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005549\|Ga0070704_101439600	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005553\|Ga0066695_10258943	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005569\|Ga0066705_10945365	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300006031\|Ga0066651_10482958	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300006034\|Ga0066656_10453538	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300006046\|Ga0066652_101980437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300006755\|Ga0079222_12351489	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300006791\|Ga0066653_10413131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300006847\|Ga0075431_100499303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1208	Open in IMG/M
3300006852\|Ga0075433_10585884	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300006871\|Ga0075434_100493339	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300007258\|Ga0099793_10476733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	619	Open in IMG/M
3300007265\|Ga0099794_10576636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300009012\|Ga0066710_102616474	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300009012\|Ga0066710_104678703	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300009038\|Ga0099829_10565081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	945	Open in IMG/M
3300009100\|Ga0075418_11969632	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300009137\|Ga0066709_101399350	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300010301\|Ga0134070_10146689	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300010304\|Ga0134088_10726157	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300010320\|Ga0134109_10067747	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300010322\|Ga0134084_10329543	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300010333\|Ga0134080_10163200	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300010333\|Ga0134080_10247694	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300010337\|Ga0134062_10147960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1042	Open in IMG/M
3300010337\|Ga0134062_10444583	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300010373\|Ga0134128_10673068	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300010401\|Ga0134121_13278206	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010403\|Ga0134123_10121530	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2116	Open in IMG/M
3300011430\|Ga0137423_1190731	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	615	Open in IMG/M
3300012035\|Ga0137445_1064069	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	728	Open in IMG/M
3300012140\|Ga0137351_1035790	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300012174\|Ga0137338_1040269	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300012201\|Ga0137365_10986330	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300012203\|Ga0137399_10768389	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012204\|Ga0137374_11218146	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012204\|Ga0137374_11268106	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300012205\|Ga0137362_11172253	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012206\|Ga0137380_10015208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	7023	Open in IMG/M
3300012206\|Ga0137380_10177470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1938	Open in IMG/M
3300012206\|Ga0137380_10200157	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1812	Open in IMG/M
3300012207\|Ga0137381_10163692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1918	Open in IMG/M
3300012207\|Ga0137381_10699572	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300012207\|Ga0137381_11772589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300012211\|Ga0137377_10142708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2291	Open in IMG/M
3300012211\|Ga0137377_10383853	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1342	Open in IMG/M
3300012211\|Ga0137377_11203391	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012349\|Ga0137387_10341842	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300012351\|Ga0137386_10143417	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300012355\|Ga0137369_10167285	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300012355\|Ga0137369_10470801	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	893	Open in IMG/M
3300012358\|Ga0137368_10776078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300012358\|Ga0137368_10836641	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012358\|Ga0137368_10950862	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300012361\|Ga0137360_11901497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300012362\|Ga0137361_10721523	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300012362\|Ga0137361_11798538	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012399\|Ga0134061_1163598	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300012683\|Ga0137398_10077401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	2043	Open in IMG/M
3300012917\|Ga0137395_10277147	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300012918\|Ga0137396_10047547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2929	Open in IMG/M
3300012918\|Ga0137396_10806316	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300012922\|Ga0137394_10381540	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1202	Open in IMG/M
3300012925\|Ga0137419_11158817	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300012925\|Ga0137419_11174749	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012925\|Ga0137419_11674697	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	542	Open in IMG/M
3300012944\|Ga0137410_11081500	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300012972\|Ga0134077_10265883	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300012972\|Ga0134077_10529356	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300014150\|Ga0134081_10332962	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300014154\|Ga0134075_10117346	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300014154\|Ga0134075_10333972	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300015054\|Ga0137420_1004754	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300015054\|Ga0137420_1350217	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300015054\|Ga0137420_1434215	All Organisms → cellular organisms → Bacteria	4147	Open in IMG/M
3300015241\|Ga0137418_10623412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	842	Open in IMG/M
3300015358\|Ga0134089_10186222	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300015358\|Ga0134089_10241739	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300017654\|Ga0134069_1350715	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300017659\|Ga0134083_10123866	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300017997\|Ga0184610_1115652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	860	Open in IMG/M
3300018028\|Ga0184608_10080674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1333	Open in IMG/M
3300018056\|Ga0184623_10140552	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300018063\|Ga0184637_10627344	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300018074\|Ga0184640_10178560	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300018078\|Ga0184612_10269867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	876	Open in IMG/M
3300020015\|Ga0193734_1040037	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300022534\|Ga0224452_1051762	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300022694\|Ga0222623_10052440	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300022756\|Ga0222622_10325746	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300025899\|Ga0207642_11099552	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	514	Open in IMG/M
3300025910\|Ga0207684_10287791	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300025918\|Ga0207662_11207172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300025921\|Ga0207652_11391463	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300025988\|Ga0208141_1004626	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300026296\|Ga0209235_1233529	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300026313\|Ga0209761_1302247	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300026324\|Ga0209470_1376170	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300026324\|Ga0209470_1379742	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300026536\|Ga0209058_1348524	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300026537\|Ga0209157_1020281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4106	Open in IMG/M
3300026540\|Ga0209376_1052948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2322	Open in IMG/M
3300026550\|Ga0209474_10213616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1220	Open in IMG/M
3300027388\|Ga0208995_1049913	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300027513\|Ga0208685_1043625	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300027643\|Ga0209076_1030071	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300027643\|Ga0209076_1153598	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300027748\|Ga0209689_1147072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300027775\|Ga0209177_10073739	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300027846\|Ga0209180_10691695	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	555	Open in IMG/M
3300027857\|Ga0209166_10363381	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300027903\|Ga0209488_10564961	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300028719\|Ga0307301_10156807	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300028784\|Ga0307282_10145402	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300028784\|Ga0307282_10275146	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300031199\|Ga0307495_10043301	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300032180\|Ga0307471_101533273	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	824	Open in IMG/M
3300033417\|Ga0214471_11323250	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.62%
Host-Associated	Host-Associated	4.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.67%
Aquatic	Environmental → Aquatic	10.95%
Plants	Host-Associated → Plants	4.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.67%
Sediment	Environmental → Aquatic → Sediment	10.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.46%
Freshwater	Environmental → Aquatic → Freshwater	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.22%
Loam	Environmental → Terrestrial → Soil → Loam	9.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.73%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.46%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.46%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.73%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.73%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012140	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025988	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_102200471	3300002561	Grasslands Soil	HASKAFFWVMGGLQINYSSKLNVFAHYLLTSSAADFLLEGNTHTLQGGVRLSLGSSKEGITERH*
Ga0062589_1011449321	3300004156	Soil	LQINYSSKLNVFAHYILTSGAANFLLESNTHTLQGGIRYSLGSSKEGITERH*
Ga0062381_101737041	3300004808	Wetland Sediment	SSKLNVFAHYLLTSSAPGFLIDGNTHSLQGGIRYSLGTSKEGITERH*
Ga0062594_1008667392	3300005093	Soil	MGGLQINYSSKLNVFAHYILTSGAANFLLESNTHTLQGGIRYSLGSSKEGITERH*
Ga0062594_1033524042	3300005093	Soil	QASSKAFFWVLGGLQMNYSSKFNIFAQYMLTSASSNFLLDGNTHTLQAGVRYSLGTSKEGVTERH*
Ga0066674_104900161	3300005166	Soil	LQINYSSKLNVFAHYLLTSSASNFLLQSNTHTLQGGVRISFGTSKEGITERH*
Ga0066683_100285521	3300005172	Soil	RAFFWLMGGLQVNYSTRLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH*
Ga0066676_106584741	3300005186	Soil	LNVFAHYILTSSAANFLLESNTHTFQGGIRLSLGTSKEGITERH*
Ga0070691_100639981	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	KAFFWVLGGLQMNYSSKFNIFAQYMLTSASSNFLLDGNTHTLQAGVRYSLGTSKEGVTERH*
Ga0070687_1013140581	3300005343	Switchgrass Rhizosphere	HYILTSGAANFLLESNTHTLQGGIRYSLGSSKEGITERH*
Ga0070701_100307051	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	FFWLMGGLQINYSSKLNVFAHYILTSGAANFLLESNTHTLQGGIRYSLGSSKEGITERH*
Ga0066682_100501443	3300005450	Soil	NVFAHYLLTSGASNFLLLSNTHTLQGGVRISLGTSKEGITERH*
Ga0066681_109743081	3300005451	Soil	LQINYSKKLNVFAQYMLTSAASNFLLESNTHTLQGGVRLSFGTSKEGITERN*
Ga0070706_1001943031	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LQINYSTKLNVFAHYLITSSAQGFLIDGNTHTIQGGIRYSLGTSKEGVGSRH*
Ga0070707_1001766231	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YSTKLNVFAHYLITSSAQGFLIDGNTHTIQGGIRYSLGTSKEGVGSRH*
Ga0070707_1007644193	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AQASSKAFFWVLGGLQMNYSSKFNIFAQYMLTSASSNFLLDGNTHTLQAGVRYSLGTSKEGVTERH*
Ga0070704_1000978075	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KLNVFAHYILTSGAANFLLEGNTHTLQGGVRLSLGSSKEGITDRH*
Ga0070704_1009008241	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	KAFFWVMGGLQINYSTKLNVFAHYLITSSAAGFLIESNTHTIQGGIRYSLGTSKEGITERH*
Ga0070704_1014396002	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MGGLQINYSSKLNVFAHYILTSGAANFLLESNTHSLQGGIRYSLGSSKEGITERH*
Ga0066695_102589431	3300005553	Soil	QSSRAFFWLMGGLQVNYSTRLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH*
Ga0066705_109453652	3300005569	Soil	SSKAFFWLMGGLQINYSSKLNVFAHYLLTSSASNFLLESNTHTLQGGVRLSLGSAKEGITEQH*
Ga0066651_104829582	3300006031	Soil	SSASNFLLESNTHTLQGGVRLSLGSAKEGITEQH*
Ga0066656_104535382	3300006034	Soil	LTSGASNFLLQSNTHTLQGGIRYSMGSAKEGVTER*
Ga0066652_1019804371	3300006046	Soil	YSTKLNVFAHYLLTSSAAGFLIESNTHTIQGGIRYSLGTSKEGITEQH*
Ga0079222_123514891	3300006755	Agricultural Soil	INYSSKLNVFAHYILTSSAANFLLQSNTHTLQGGIRLSLGTSKEGIGERR*
Ga0066653_104131311	3300006791	Soil	AASKAFFWVMGGLQVNYSSKLNVFAQYVLTSSSSNFLLDSNTHTVQGGVRLSFGTSKEGITDRH*
Ga0075431_1004993031	3300006847	Populus Rhizosphere	MLTSSSAEFLLDGNTHSLQAGVRYSLGTSKEGITDRH*
Ga0075433_105858843	3300006852	Populus Rhizosphere	DASSKAFFWVMGGLQINYSTKLNVFAHYLITSSAAGFLIESNTHTIQGGIRYSLGTSKEGITERH*
Ga0075434_1004933391	3300006871	Populus Rhizosphere	QSSKAFFWIMGGLQINYSSKLNVFAHYILTSSAANFLLQSNTHTLQGGIRLSLGTSKEGIGERR*
Ga0099793_104767332	3300007258	Vadose Zone Soil	WVMGGLQINYSTKLNVFAHYLITSSAAGFLIQGNTHTLQGGIRYSLGTSKEGVTER*
Ga0099794_105766361	3300007265	Vadose Zone Soil	SKAFFWVMGGLQINYSTKLNVFAHYLLTSSAAGFLIQGNTHTLQGGIRYSLSPSKEGVTER*
Ga0066710_1026164741	3300009012	Grasslands Soil	AQYLMTSSASNFLLLSNTHSLQGGVRVSLGTSKEGITERH
Ga0066710_1046787031	3300009012	Grasslands Soil	LLTSSAANFLLESNTHTLQGGVRLSLGSYREGITERH
Ga0099829_105650812	3300009038	Vadose Zone Soil	FFWLMGGLQINYSSKLNVFAHYLLTSSAANFLLESNTHTLQGGIRLSLGSSKEGITERH*
Ga0075418_119696321	3300009100	Populus Rhizosphere	SKAFFWVMGGLQINYSGKLNVFAHYILTSGAANFLLESNTHTLQGGVRISLGSSKEGITDRH*
Ga0066709_1013993501	3300009137	Grasslands Soil	QINYSKKLNVFAQYMLTSAAANFLLESNTHTLQAGARLSFGTSKEGITERN*
Ga0134070_101466891	3300010301	Grasslands Soil	INYSTKLNVFAHYLITSAARDFLIQGNTHTLQGGIRYSLGTSKEGITERH*
Ga0134088_107261571	3300010304	Grasslands Soil	SKLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITEQH*
Ga0134109_100677471	3300010320	Grasslands Soil	VNYSTRLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH*
Ga0134084_103295432	3300010322	Grasslands Soil	QSSRAFFWLMGGLQVNYSTRLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGIPARH*
Ga0134080_101632002	3300010333	Grasslands Soil	AHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH*
Ga0134080_102476941	3300010333	Grasslands Soil	LLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH*
Ga0134062_101479602	3300010337	Grasslands Soil	LQVNYSSKLNVFAQYVLTSSSSNFLLDSNTHTVQGGVRLSFGTSKEGITDRH*
Ga0134062_104445831	3300010337	Grasslands Soil	SKAFFWVMGGLQINYSKKLNVFAQYMLTSAASNFLLESNTHTLQGGVRLSFGTSKEGITERN*
Ga0134128_106730682	3300010373	Terrestrial Soil	MGGLQINYSSKLNVFAHYLITSSAQGFLIESNTHTIQGGVRYSLGTSKEGITDRH*
Ga0134121_132782061	3300010401	Terrestrial Soil	AFFWLMGGLQINYSSKLNVFAHYILTSGAANFLLESNTHTLQGGIRYSLGSSKEGITERH
Ga0134123_101215304	3300010403	Terrestrial Soil	LMGGLQINYSSKLNVFAHYILTSGAANFLLESNTHTLQGGIRYSLGSSKEGITERH*
Ga0137423_11907312	3300011430	Soil	FVWVMGGLQINYSSKLNVFAHYILTSGAANFLLEGNTHTLQGGVRLSLGSSKEGITDRH*
Ga0137445_10640691	3300012035	Soil	LQINYSTKLNVFAHYILTSSAAGFLIESNTHSLQGGIRYSLGTSKEGITERR*
Ga0137351_10357902	3300012140	Soil	LTSGAANFLLEGNTHTLQGGVRLSLGSSKEGITDRH*
Ga0137338_10402692	3300012174	Soil	MGGVQINVGKLAVYGHYMLTSAAQGFLISGSTHTIQGGIRYSLGTSKEDVNTAH*
Ga0137365_109863302	3300012201	Vadose Zone Soil	SSASNFLLLSNTHSLQGGVRVSFGTSKEGITERH*
Ga0137399_107683892	3300012203	Vadose Zone Soil	FFWLMGGLQINYSSKLNVFAHYLLTSGAANFLLESNTHTIQGGIRVSLGSSKEGVTERH*
Ga0137374_112181461	3300012204	Vadose Zone Soil	SSKLNVFAHYLLTSSAGNFLLESNTHTIQGGVRISLGTSKEGITERH*
Ga0137374_112681061	3300012204	Vadose Zone Soil	NVFAHYLITSSAAGFLIESNTHTIQGGIRYSLGTSKEGVTERH*
Ga0137362_111722531	3300012205	Vadose Zone Soil	SSKAFFWIMGGLQINYSSKLNVFAHYILTSSAANFLLESNTHTFQGGIRLSLGTSKEGITERH*
Ga0137380_100152088	3300012206	Vadose Zone Soil	QINYSTKLNVFAHYLLTSSAQGFLIEGNTHTIQGGIRYSLGTSKEGITERN*
Ga0137380_101774702	3300012206	Vadose Zone Soil	VNELSSRAFFWLMGGLQINYSSKLNVFAHYLLTSGASNFLLQSNTHTLQGGIRYSMGSAKEGVTTER*
Ga0137380_102001571	3300012206	Vadose Zone Soil	TSSAANFLLQSNTHTLQGGIRISLGTSKEGITEQH*
Ga0137381_101636921	3300012207	Vadose Zone Soil	IMGGLQINYSSKLNVFAHYLLTSGAANFLLQSNTHTLQGGIRLSLGTSKEGITERH*
Ga0137381_106995721	3300012207	Vadose Zone Soil	INYSSKLNVFAHYLLTSGASNFLLQSNTHTLQGGIRYSMGSAKEGVTTER*
Ga0137381_117725891	3300012207	Vadose Zone Soil	LNVFAHYLLTSSAQGFLIEGNTHTIQGGIRYSLGTSKEGITERN*
Ga0137377_101427084	3300012211	Vadose Zone Soil	ASKAFFWVMGGLQINYSSKLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITEQH*
Ga0137377_103838531	3300012211	Vadose Zone Soil	QINYSSKLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITEQH*
Ga0137377_112033912	3300012211	Vadose Zone Soil	ASKAFFWVMGGLQINYSSKLNVFAHYLLTSSAANFLLQSNTHTLQGGIRISLGTSKEGITEQH*
Ga0137387_103418424	3300012349	Vadose Zone Soil	YLLTSSAANFLLQSNTHTLQGGIRISLGTSKEGITEQH*
Ga0137386_101434171	3300012351	Vadose Zone Soil	SKAFFWLMGGLQINYSSKLNVFAHYMLTSSASNFLLESNTHTLQGGVRLSLGSAKEGITEQH*
Ga0137369_101672851	3300012355	Vadose Zone Soil	DRVHDQSSRAFFWVMGGLQINYSSKLNVFAHYLLTSSAGNFLLESNTHTIQGGVRISLGTSKEGITERH*
Ga0137369_104708012	3300012355	Vadose Zone Soil	MGGLQINYSTRLNVFAHYLLTSSAANFLLESNTHTLQGGMRLSLGTSKEGVTERH*
Ga0137368_107760782	3300012358	Vadose Zone Soil	FFWVMGGLQINYSTKLNVFAHYLITSAARDFLIQGNTHTLQGGIRYSLGTSKEGITERH*
Ga0137368_108366412	3300012358	Vadose Zone Soil	VKGGLQINYSVELTVFAHYMITSAAQDFLMQGNTHTIQGGIRYSLGTSKEGITERH*
Ga0137368_109508621	3300012358	Vadose Zone Soil	YSSKLNVFAHYLLTSSAGNFLLESNTHTLQGGVRISLGTSKEGITERH*
Ga0137360_119014971	3300012361	Vadose Zone Soil	INYSSKLNVFAHYMMTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH*
Ga0137361_107215232	3300012362	Vadose Zone Soil	NVFAHYLLTSSAANFLLESNTHTFQGGVRLSLGSAREGITERH*
Ga0137361_117985382	3300012362	Vadose Zone Soil	SKAFFWLMGGLQINYSSKLNVFAHYLLTSSASNFLLESNTHTLQGGIRLSLGSAKEGITEQH*
Ga0134061_11635982	3300012399	Grasslands Soil	SSKAFFWIMGGLQINYSSKLNVFAHYLLTSSASNYLLLSNTHSLQGGVRVSLGTSKEGITERH*
Ga0137398_100774011	3300012683	Vadose Zone Soil	GLQINYSTRLNVFAHYLLTSSAANFLLQSNTHTLQGGMRLSLGTSKEGITERH*
Ga0137395_102771472	3300012917	Vadose Zone Soil	SSKAFFWIMGGLQINYSSKLNVFAHYILTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH*
Ga0137396_100475474	3300012918	Vadose Zone Soil	GGIQINYSSKLNVFAHYMMTSSAANFLLQSNTHTLQGGIRISMGSAKEDITERH*
Ga0137396_108063161	3300012918	Vadose Zone Soil	SKAFFWVMGGLQINYSTKLNVFAHYLLTSSAAGFLIESNTHTIQGGIRYSLGSSKEGITDRH*
Ga0137394_103815401	3300012922	Vadose Zone Soil	INYSSKLNVFAHYMMTSSAANFLLQSNTHTLQGGIRISMGSSKEGITERH*
Ga0137419_111588171	3300012925	Vadose Zone Soil	SSAANFLLESNTHTLQGGIRLSLGSSKEGITERH*
Ga0137419_111747491	3300012925	Vadose Zone Soil	HDASSRAFFWLMGGIQINYSSKLNVFAHYMMTSSAANFLLQSNTHTLQGGIRISMGSSKEGITERH*
Ga0137419_116746971	3300012925	Vadose Zone Soil	STRLNVFAHYILTSSAANFLLESNTHTLQGGIRLSLGTSKEGITERH*
Ga0137410_110815002	3300012944	Vadose Zone Soil	AASKAFFWVMGGLQINYSTKLNVFAHYLITSGAAGFLIQGNTHTVQGGIRYSLGTSKEGITERN*
Ga0134077_102658832	3300012972	Grasslands Soil	KAFFWIMGGLQINYSSRLNVFAHYILTSSAANFLLESNTHTLQGGIRLSLGTSKEGITERH*
Ga0134077_105293561	3300012972	Grasslands Soil	TVTSSAQGFLLDGNTHTLQGGIRYSFGTSKEGITERQ*
Ga0134081_103329622	3300014150	Grasslands Soil	SSKAFFWLAGGLQINYSSKLNVFAQYLMTSSASNFLLLSNTHSLQGGVRVSLGTSKEGITERH*
Ga0134075_101173461	3300014154	Grasslands Soil	SKAFFWIMGGLQINYSSKLNVFAHYLLTSSASNYLLLSNTHSLQGGVRVSLGTSKEGITERH*
Ga0134075_103339721	3300014154	Grasslands Soil	DQSSKAFFWIMGGLQINYSSRLNVFAHYILTSSAANFLLESNTHTFQGGIRLSLGTSKEGITERH*
Ga0137420_10047541	3300015054	Vadose Zone Soil	AGRSSFWLMGGIQINYSSKLNVFAHYMMTSSAANFLLQSNTHTLQGGIRISMGSSKEGITERH*
Ga0137420_13502171	3300015054	Vadose Zone Soil	TRPCVHDASSRAFFWLMGGIQINYSSKLNVFAHYMMTSSAANFLLQSNTHTLQGGIRISMGSSKEGITERH*
Ga0137420_14342154	3300015054	Vadose Zone Soil	MGGLQINYSTRLNVFAHYLLTSSAANFLLESNTHTLQGGIRLSLGTSKEGITERH*
Ga0137418_106234123	3300015241	Vadose Zone Soil	FAHYILTSSAANFLLESNTHTLQGGIRLSLGTSKEGITERH*
Ga0134089_101862221	3300015358	Grasslands Soil	NVFAHYLLTSSASNYLLLSNTHSLQGGVRVSLGTSKEGITERH*
Ga0134089_102417391	3300015358	Grasslands Soil	VWLMAGLQINYSSKLNVFAHYLLTSSGNNFLVQGNTHSLQGGVRVSLGTSKEGITERH*
Ga0134069_13507152	3300017654	Grasslands Soil	LQVNYSTRLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH
Ga0134083_101238661	3300017659	Grasslands Soil	SSKAFFWVMGGLQINYSKKLNVFAQYMLTSAAANFLLESNTHTLQGGVRLSFGTSKEGITERN
Ga0184610_11156523	3300017997	Groundwater Sediment	NYSSKLNLFAHYILTSSAANFLLESNTHTLQGGIRYSMGTSKEGITERH
Ga0184608_100806741	3300018028	Groundwater Sediment	LNVFAHYILTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH
Ga0184623_101405521	3300018056	Groundwater Sediment	YSNKLNVFGHYILTSSSRNFLLMSNSHTFQGGVRYAFGTSKEGIGDRH
Ga0184637_106273442	3300018063	Groundwater Sediment	LQMNYSNKLNVFGHYILTSSSRNFLLMSNSHTFQGGVRYAFGTSKEGIGDRH
Ga0184640_101785603	3300018074	Groundwater Sediment	SRAFFWVMGGLQINYSSKLNVFAHYLLTSSAANFLLDGNTHSLQGGVRVSLGTAKEGLTERH
Ga0184612_102698671	3300018078	Groundwater Sediment	GLQVNYSSKLNLFAHYILTSSAANFLLESNTHTLQGGIRYSMGTSKEGITERH
Ga0193734_10400371	3300020015	Soil	YSTKLNVFAHYLLTSSAQGFLIESNTHTIQGGIRYSLGTSKEGITEAH
Ga0224452_10517621	3300022534	Groundwater Sediment	NYSTKLNVFAHYILTSSAAGFLIESNTHTIQGGIRYSMGTSKEGVTERH
Ga0222623_100524403	3300022694	Groundwater Sediment	AHDASSRAFFWVMGGLQINYSTKLNVFAHYILTSSAAGFLIESNTHTIQGGIRYSMGTSKEGVTERH
Ga0222622_103257462	3300022756	Groundwater Sediment	YSTKLNVFAHYLITSSAAGFLIESNTHTIQGGIRYSLGTSKEGITERH
Ga0207642_110995522	3300025899	Miscanthus Rhizosphere	LAIQAFFWLMGGLQINYSSKLNVFAHYILTSGAANFLLESNTHTLQGGIRYSLGSSKEGITERH
Ga0207684_102877913	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AHYILTSSAANFLLQSNTHTLQGGIRLSLGTSKEGIGERR
Ga0207662_112071721	3300025918	Switchgrass Rhizosphere	HYILTSGAANFLLESNTHTLQGGIRYSLGSSKEGITERH
Ga0207652_113914632	3300025921	Corn Rhizosphere	WIMGGLQINYSSKLNVFAHYLLTSSAPGFLIDGNTHTLQGGIRYSLGTAKEGITERH
Ga0208141_10046263	3300025988	Rice Paddy Soil	KTFFWVMGGLQINYSSKLNVFAHYLLTSSASNFLLESNTHTLQGGVRISLGSSKEGVTER
Ga0209235_12335291	3300026296	Grasslands Soil	VMGGLQINYSSKLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITEQH
Ga0209761_13022472	3300026313	Grasslands Soil	LNVFAHYLLTSSAADFLLEGNTHTLQGGVRLSLGSSKEGITERH
Ga0209470_13761702	3300026324	Soil	QINYSSKLNVFAQYLMTSSASNFLLLSNTHSLQGGVRVSLGTSKEGITERH
Ga0209470_13797422	3300026324	Soil	AFFWIMGGLQINYSSKLNVFAHYILTSSAANFLLESNTHTFQGGIRLSLGTSKEGITERH
Ga0209058_13485242	3300026536	Soil	WIMGGLQINYSSKLNVFAHYLLTSGASNFLLLSNTHTLQGGVRISLGTSKEGITERH
Ga0209157_10202811	3300026537	Soil	LNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITEQH
Ga0209376_10529481	3300026540	Soil	YLMTSSASNFLLLSNTHSLQGGVRVSLGTSKEGITERH
Ga0209474_102136161	3300026550	Soil	SSRAFFWIMGGLQINYSSKLNVFAHYLMTSSAPNFLLQSNTHSLQGGIRYSLGTSKEGVTERH
Ga0208995_10499131	3300027388	Forest Soil	LLTSSANNFLLEGNTHTIQGGIRLSLGSSKEGIIERH
Ga0208685_10436253	3300027513	Soil	QINYSSKLNVFAHYILTSGAANFLLEGNTHTLQGGVRLSLGSSKEGITDRH
Ga0209076_10300711	3300027643	Vadose Zone Soil	NVFAHYLLTSSAANFLLQSNTHTLQGGIRISMGSSKEGITERH
Ga0209076_11535982	3300027643	Vadose Zone Soil	QINYSTKLNVFAHYLITSGAAGFLIQGNTHTVQGGIRYSLGTSKEGVTER
Ga0209966_10706852	3300027695	Arabidopsis Thaliana Rhizosphere	LRYIRRACAHEASSKAFFWLMGGLQINYSSRLNVFAHYILTSGAANFLLESNTHTLQGGIRYSLGSSKEGITERH
Ga0209689_11470721	3300027748	Soil	KLNVFAHYLLTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITEQH
Ga0209177_100737392	3300027775	Agricultural Soil	MTPQASRAFFWIMGGLQINYSSKLNVFAHYMLTSSASNFLLESNTHTLQGGVRLSLGSAKEGIAETH
Ga0209180_106916952	3300027846	Vadose Zone Soil	MGGLQINYSSKLNVFAHYLLTSSAANFLLESNTHTLQGGIRLSLGSSKEGITERH
Ga0209166_103633812	3300027857	Surface Soil	AHYLLTSSANGFLLDSNTHSLQGGVRVSLGSSKEGITERN
Ga0209488_105649612	3300027903	Vadose Zone Soil	NYSSKLNVFAHWLLTSGASNFLLQSNTHSLQGGVRISLGTSKEGIGERH
Ga0307301_101568071	3300028719	Soil	SKLNVFAHYLLTSSAANFLLESNTHTLQGGIRLSLGTSKEGITERH
Ga0307282_101454021	3300028784	Soil	IMGGLQINYSSKLNVFAHYILTSSAANFLLQSNTHTLQGGIRLSLGTSKEGITERH
Ga0307282_102751461	3300028784	Soil	FFWVMGGLQINYSTKLNVFAHYLITSSAAGFLIESNTHTIQGGIRYSLGTSKEGITERH
Ga0307495_100433011	3300031199	Soil	ASSKAFFWVMGGLQINYSKKLNVFAQYMLTSAAANFLLESNTHTLQAGARLSFGTSKEGITERN
Ga0307471_1015332732	3300032180	Hardwood Forest Soil	AFFWVLGGLQMNYSSKFNIFAQYMLTSASSNFLLDGNTHTLQAGVRYSLGTSKEGVTERH
Ga0214471_113232501	3300033417	Soil	SKAFFWVKGGLQINYSSKLNVFANYLITSSSRGFLLDGNTHTLQGGIRYSLGTSKEGISERN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056497

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences