Metagenome / Metatranscriptome Family F056473

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056473
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	72 residues
Representative Sequence	VATAAAAPAAEEAWARAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRLLLVEPGAAGLAPRSDLFPSANPLA
Number of Associated Samples	108
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.57 %
% of genes near scaffold ends (potentially truncated)	89.78 %
% of genes from short scaffolds (< 2000 bps)	80.29 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.701 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.898 % of family members)
Environment Ontology (ENVO)	Unclassified (55.474 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.234 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.17% β-sheet: 0.00% Coil/Unstructured: 82.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF01597	GCV_H	69.34
PF02347	GDC-P	14.60
PF13483	Lactamase_B_3	8.76
PF00753	Lactamase_B	2.19
PF00496	SBP_bac_5	1.46
PF12706	Lactamase_B_2	1.46
PF00854	PTR2	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0509	Glycine cleavage system protein H (lipoate-binding)	Amino acid transport and metabolism [E]	69.34
COG0403	Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain	Amino acid transport and metabolism [E]	14.60
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	14.60
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.70 %
Unclassified	root	N/A	7.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.70 %
Unclassified	root	N/A	7.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.70 %
Unclassified	root	N/A	7.30 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	49.64 %
Unclassified	root	N/A	7.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	49.64 %
Unclassified	root	N/A	7.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	40.15 %
Unclassified	root	N/A	7.30 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	5.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	40.15 %
Unclassified	root	N/A	7.30 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.84 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	28.47 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	11.68 %
Unclassified	root	N/A	7.30 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	28.47 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	11.68 %
Unclassified	root	N/A	7.30 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10179295	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300002557\|JGI25381J37097_1044184	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300002561\|JGI25384J37096_10063786	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300002562\|JGI25382J37095_10193616	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300002562\|JGI25382J37095_10231620	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	557	Open in IMG/M
3300002911\|JGI25390J43892_10109049	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	625	Open in IMG/M
3300002911\|JGI25390J43892_10160928	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300002914\|JGI25617J43924_10208682	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	650	Open in IMG/M
3300002915\|JGI25387J43893_1045809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	608	Open in IMG/M
3300002916\|JGI25389J43894_1082108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	567	Open in IMG/M
3300002916\|JGI25389J43894_1096383	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005174\|Ga0066680_10322532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	985	Open in IMG/M
3300005175\|Ga0066673_10050998	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2086	Open in IMG/M
3300005179\|Ga0066684_10018588	All Organisms → cellular organisms → Bacteria	3567	Open in IMG/M
3300005186\|Ga0066676_10547380	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005434\|Ga0070709_11280226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	591	Open in IMG/M
3300005450\|Ga0066682_10478216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	790	Open in IMG/M
3300005450\|Ga0066682_10628337	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005467\|Ga0070706_100648332	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300005549\|Ga0070704_100023746	All Organisms → cellular organisms → Bacteria	4011	Open in IMG/M
3300005556\|Ga0066707_10094323	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300005560\|Ga0066670_11015203	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005566\|Ga0066693_10203117	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	770	Open in IMG/M
3300005576\|Ga0066708_10408242	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300005576\|Ga0066708_10639152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	679	Open in IMG/M
3300006031\|Ga0066651_10038610	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300006794\|Ga0066658_10245292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	957	Open in IMG/M
3300006794\|Ga0066658_10483283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	674	Open in IMG/M
3300006794\|Ga0066658_10585199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	607	Open in IMG/M
3300006797\|Ga0066659_10399304	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300006800\|Ga0066660_11474123	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300006804\|Ga0079221_10881276	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300006903\|Ga0075426_10043206	All Organisms → cellular organisms → Bacteria	3220	Open in IMG/M
3300007265\|Ga0099794_10047710	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300009012\|Ga0066710_101979554	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300009038\|Ga0099829_10489101	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1021	Open in IMG/M
3300009090\|Ga0099827_11650768	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300009137\|Ga0066709_101787435	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300009137\|Ga0066709_103566762	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	564	Open in IMG/M
3300009143\|Ga0099792_10205954	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300009795\|Ga0105059_1034936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	615	Open in IMG/M
3300010303\|Ga0134082_10229260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	766	Open in IMG/M
3300010320\|Ga0134109_10240639	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	680	Open in IMG/M
3300010321\|Ga0134067_10118006	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300010335\|Ga0134063_10666895	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	535	Open in IMG/M
3300010336\|Ga0134071_10079243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1535	Open in IMG/M
3300010336\|Ga0134071_10147872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1141	Open in IMG/M
3300010336\|Ga0134071_10749336	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	519	Open in IMG/M
3300010364\|Ga0134066_10315706	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	567	Open in IMG/M
3300010371\|Ga0134125_10956843	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300011269\|Ga0137392_11507422	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012206\|Ga0137380_10945015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	739	Open in IMG/M
3300012206\|Ga0137380_11219099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	637	Open in IMG/M
3300012207\|Ga0137381_10899573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	765	Open in IMG/M
3300012210\|Ga0137378_10917040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	789	Open in IMG/M
3300012285\|Ga0137370_10060164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2059	Open in IMG/M
3300012351\|Ga0137386_10277519	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300012353\|Ga0137367_10528775	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300012353\|Ga0137367_11066148	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300012354\|Ga0137366_10177595	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1597	Open in IMG/M
3300012358\|Ga0137368_10088670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2439	Open in IMG/M
3300012360\|Ga0137375_10201431	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1883	Open in IMG/M
3300012361\|Ga0137360_10250537	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300012397\|Ga0134056_1147958	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300012532\|Ga0137373_11070851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	579	Open in IMG/M
3300012683\|Ga0137398_10524906	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300012922\|Ga0137394_10654783	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	886	Open in IMG/M
3300012929\|Ga0137404_10383609	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300012972\|Ga0134077_10100763	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300012972\|Ga0134077_10441482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	568	Open in IMG/M
3300012975\|Ga0134110_10155226	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300012977\|Ga0134087_10050011	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300014154\|Ga0134075_10253141	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300015241\|Ga0137418_10410541	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1103	Open in IMG/M
3300015241\|Ga0137418_11198763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	534	Open in IMG/M
3300015356\|Ga0134073_10058398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1053	Open in IMG/M
3300015357\|Ga0134072_10408852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	537	Open in IMG/M
3300015359\|Ga0134085_10145516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1004	Open in IMG/M
3300015359\|Ga0134085_10235347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	795	Open in IMG/M
3300015359\|Ga0134085_10551556	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300017659\|Ga0134083_10427366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	582	Open in IMG/M
3300018433\|Ga0066667_10415295	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1091	Open in IMG/M
3300018433\|Ga0066667_10462935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1038	Open in IMG/M
3300018433\|Ga0066667_11581215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300018482\|Ga0066669_11260760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	668	Open in IMG/M
3300019882\|Ga0193713_1201257	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	508	Open in IMG/M
3300021046\|Ga0215015_10236265	All Organisms → cellular organisms → Bacteria	7636	Open in IMG/M
3300021080\|Ga0210382_10246547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	781	Open in IMG/M
3300024219\|Ga0247665_1007249	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300024330\|Ga0137417_1037569	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	969	Open in IMG/M
3300024347\|Ga0179591_1021517	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M
3300025319\|Ga0209520_10100211	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300025910\|Ga0207684_10425073	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300025922\|Ga0207646_10668047	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300026277\|Ga0209350_1160255	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300026305\|Ga0209688_1094505	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300026310\|Ga0209239_1000603	All Organisms → cellular organisms → Bacteria	20804	Open in IMG/M
3300026310\|Ga0209239_1095134	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300026310\|Ga0209239_1337744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	525	Open in IMG/M
3300026313\|Ga0209761_1258727	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	659	Open in IMG/M
3300026313\|Ga0209761_1264973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	638	Open in IMG/M
3300026316\|Ga0209155_1083334	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300026320\|Ga0209131_1052959	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2283	Open in IMG/M
3300026323\|Ga0209472_1165057	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	807	Open in IMG/M
3300026324\|Ga0209470_1175120	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300026325\|Ga0209152_10217797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	715	Open in IMG/M
3300026325\|Ga0209152_10226439	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	699	Open in IMG/M
3300026330\|Ga0209473_1245075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	623	Open in IMG/M
3300026343\|Ga0209159_1100097	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1263	Open in IMG/M
3300026523\|Ga0209808_1035125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2388	Open in IMG/M
3300026524\|Ga0209690_1165327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	778	Open in IMG/M
3300026542\|Ga0209805_1334536	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300026551\|Ga0209648_10005506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	10842	Open in IMG/M
3300027013\|Ga0209884_1015368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	750	Open in IMG/M
3300027324\|Ga0209845_1046553	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	686	Open in IMG/M
3300027725\|Ga0209178_1024312	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300027765\|Ga0209073_10120836	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300027862\|Ga0209701_10304091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	915	Open in IMG/M
3300027882\|Ga0209590_10071135	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300028065\|Ga0247685_1034704	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300028819\|Ga0307296_10263602	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300031720\|Ga0307469_11151532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	731	Open in IMG/M
3300031820\|Ga0307473_10047367	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300032180\|Ga0307471_100223786	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300032180\|Ga0307471_100529272	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300032205\|Ga0307472_100062558	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300032205\|Ga0307472_100320934	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.27%
Host-Associated	Host-Associated	0.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.54%
Aquatic	Environmental → Aquatic	0.73%
Plants	Host-Associated → Plants	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.54%
Freshwater	Environmental → Aquatic → Freshwater	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.05%
Loam	Environmental → Terrestrial → Soil → Loam	5.84%
Sand	Environmental → Terrestrial → Soil → Sand	2.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	40.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.19%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.46%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	18.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.19%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_101792953	3300001661	Forest Soil	GRRRPPDAIVATAAAAPAAEQTWVRAGRPGVLAALSADPDPVAVRLDLRPWGAGRLLLVEPDAAGLAPRSDLFPAANPLP*
JGI25381J37097_10441842	3300002557	Grasslands Soil	TAAAAAAAEQAWADAGRPGVLTSLSADPDPIAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSANPLP*
JGI25384J37096_100637861	3300002561	Grasslands Soil	ARAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRLLLVEPGAAGLAPRSDLFPSANXLP*
JGI25382J37095_101936162	3300002562	Grasslands Soil	ALGQPVPPDAMVATARAAPAAQQAWGRAGRPGVLAALSDDPDPVAVRLDLRPWGAGRLLLVEPDAAGLAPRADLFPAANLLP*
JGI25382J37095_102316201	3300002562	Grasslands Soil	EKALGQPAPPDAIVATAAAAPAAEQAWTRXGRRGVLTSLSDDPDPVAVRLDLRPWGAGRLVLVEPDATGLAPRSDLFPTANPLP*
JGI25390J43892_101090492	3300002911	Grasslands Soil	AWQRAGRPGVLVLLSDDPDPVAVRLDLRPWGHERLRLAEPGAAGVAPRPDLFPEANPLP*
JGI25390J43892_101609281	3300002911	Grasslands Soil	AAAAPAAQQAWGRAGRPGVLAALSNDPDPIAVRLDLRPWGAGRLLLVEPDAAGLAPRADLFPAANPLP*
JGI25617J43924_102086822	3300002914	Grasslands Soil	AAPDAIVATRAVAAATEDAWGRGGRRGVLVWLSDDPDPVAVRLDLRPWGHERLRLVEAGGAGLAPRPDLFPSSNPLA*
JGI25387J43893_10458091	3300002915	Grasslands Soil	GDRPDAIVALHPAAAAVEAAWTHAGRPGVLTYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRPDLFPSANPLG*
JGI25389J43894_10821081	3300002916	Grasslands Soil	GERPDAIVALHPAAPAAERAWTRAGRPGVLAYLSDDPDPVAVRLDLRPWGXERLRLMEPGAAGLAPRPDLFPSXNPLG*
JGI25389J43894_10963832	3300002916	Grasslands Soil	RRVTGGSAVEKALARADPXPDAIVATVGAAATVERAWERAGRPGLLVLLSDDPDPVAVRLDLRPWGADRLRLVEPGASGVAPRPDLFPSANPLG*
Ga0066680_103225323	3300005174	Soil	WERAGRPGLLVLLSDDPDPVAVRLDLRPWGADRLRLVEPGASGVAPRPDLFPSANPLG*
Ga0066673_100509981	3300005175	Soil	AAAAAEQAWTRAGRPGVLTYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRSDLFPSGNPLG*
Ga0066684_100185881	3300005179	Soil	QQAWTRGGRRGVLTSLSADPDPVAVRLDLRPWGAGRLLLVEPDATGLAPRSDLFPTANPLP*
Ga0066676_105473801	3300005186	Soil	AAAQDAWARAGRPGVLTSLSDDPDPVAVRLDLRPWDAGRVLLVEPGAAGLAPRSDLFPSSNPLP*
Ga0070709_112802261	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AQHAWEQAGRAGVLTSLSDDPDPVAVRLDLRPWAAGRILLVEPGAAGLAPRPDLFPSANPLA*
Ga0066682_104782161	3300005450	Soil	ARAAWERAGRPGVLALLSDDPDPVTVRLDLRPWGHEPLKLAEPDAAGVTPRPDLFPPHNPLG*
Ga0066682_106283372	3300005450	Soil	PPDAIVATAGAAASVERAWERAGRPGLLVLLSDDPDPVAVRLDLRPWGADRLRLVEPGGRGVAPRPDLFPSANPLG*
Ga0066681_103332091	3300005451	Soil	TLGGVRPQAILATPRAAAATRDAWDQAGRPGTLVYLTDDPDPVAVRLDLRPWGGERLALTEEGATGSAPRTDLFRSGNPLA*
Ga0070706_1006483321	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AAAPAAEQAWTRAGRPGVLAYLSDDPDPVAVRLDLRPWGYERVRLMEPGAAGLAPRPDLFPSANPLG*
Ga0070704_1000237461	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	QPAAPDAIVATATAAAAAEQAWVHAGRPGVLTSLSEDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPAANPLP*
Ga0066707_100943231	3300005556	Soil	WADRRERPDGVVATMAAGPDVQAAWEHAGRPGVLALLSDDPDPVAVRLDLRPWGHDRLKLAEPDAAGLAPRPDLFPRHNPLG*
Ga0066704_101539263	3300005557	Soil	RAAAAAREAWEGAGRPGALLYLSDDPDPVAVRLDLRPWGGERAALAEEGAAGLPPRADLFPSGKPLA*
Ga0066670_110152032	3300005560	Soil	EALADRRERPDGVVAALAAAPGARAAWERAGRPGVLALLSDDPDPVAVRLDLRPWGHEPLKLAEPDAAGLAPRPDLFPSHNPLG*
Ga0066693_102031171	3300005566	Soil	RGGRRGVLTSLSADPDPVAVRLDLRPWGAGRLLLVEPDATGLAPRSDLFPTANPLP*
Ga0066708_104082423	3300005576	Soil	VEKALARADPPPDAIVATAAAAATVERAWERAGRPGILVLLSKDPDPVAVRLDLRPWGADRLRLVEPGGHGVAPRPDLFPSANPLG*
Ga0066708_106391521	3300005576	Soil	AIVATAAAAPAAQQAWARAGRPGVLTFLSDDPDPVAVRLDLRPWSAGRLLLVEPGAAGLAPRSDLFPSANPLP*
Ga0066651_100386103	3300006031	Soil	SAVEKALARADPTPDAIVATVGAAATVERAWERAGRPGLLVLLSDDPDPVAVRLDLRPWGADRLRLVEPGGRGVAPRPDLFPSANPLG*
Ga0066658_102452923	3300006794	Soil	VERAWERAGRPGILVLLSDDPDPVAVRLDLRPWGADRLRLIEPGASGGAPRPDLFPSANPLG*
Ga0066658_104832831	3300006794	Soil	HPAAPAAERAWTRAGRPGVLTYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRPDLFPSANPLG*
Ga0066658_105851992	3300006794	Soil	LERADKRRDAIVAVHAAAPATEQAWTRAGRPGVLAYLSDDPDPVAVRLDLRPWGHERVRLMEPGAAGLAPRPDLFPSANPLG*
Ga0066659_103993043	3300006797	Soil	AAEQAWAHAGRAGVLTSLSDDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSANLLP*
Ga0066660_114741232	3300006800	Soil	AAVEKALGRPAPPDAIVATAAAAPAAQQAWTRGGRRGVLTSLSADPDPVAVRLDLRPWGAGRLLLVEPDATGLAPRSDLFPTANPLP*
Ga0079221_108812762	3300006804	Agricultural Soil	AATIEKALGRSPRPDAIVATAAAATAAEQAWTRAGRHGVLVTLSDDPDPVAVRLDLRPWGYDRLRLVEPGAAGLAPRADVFVAANPLP*
Ga0075426_100432061	3300006903	Populus Rhizosphere	TAAAAAEQAWVHAGRPGVLTSLSEDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPPANPLP*
Ga0099794_100477104	3300007265	Vadose Zone Soil	RAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRVRLVEPGAAGLAPRSDLLPSANPLP*
Ga0066710_1019795543	3300009012	Grasslands Soil	AAGPDVQAAWEHAGRPGVLALLSDDPDPVAVRLDLRPWGHERLNLAEPDAAGLAPRPDLFPPHNPLG
Ga0099829_104891013	3300009038	Vadose Zone Soil	IAKALGQSVPPDAIVATAAAAADAQHAWEHAGRPGVLTSLSDDPDPVAVRLDLRPWAAGRILLVEPGAAGLPPRPDLFPSANPLA*
Ga0099827_116507681	3300009090	Vadose Zone Soil	PDAIVATAAAAAAAERAWERAGRPGVLVLLSDDPDPVAVRLDLRPWGYERVRLAEPGAAGVAPRLDLFPGGNPLA*
Ga0099827_116985991	3300009090	Vadose Zone Soil	PARHAWERAGKPGALLYLSADPDPVAVRLDLRPWGGDRVTLAEEGGPGRAPRTDVFPANPLA*
Ga0066709_1017874351	3300009137	Grasslands Soil	DRRERPDGVVATMAAGPDVQAAWEHAGRPGVLALLSDDPDPVAVRLDLRPWGHERLKLAEPEAAGLAPRPDLFPPHNPLG*
Ga0066709_1035667621	3300009137	Grasslands Soil	AGAAASVERAWERAGRPGLLVLLSDDPDPVAVRLDLRPWGADRLRLVEPGGRGVAPRPDLFPSANPLG*
Ga0099792_102059541	3300009143	Vadose Zone Soil	AAAAEQAWAHAGRPGVLTSLSEDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPPANPLP*
Ga0105059_10349361	3300009795	Groundwater Sand	WARAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSANPLP*
Ga0134082_102292601	3300010303	Grasslands Soil	VATARAAPAAQQAWGRAGRPGVLAALSHDPDPVAIRLDLRPWGAGRLLLVEPDAAGLAPRADLFPAANLLP*
Ga0134109_102406391	3300010320	Grasslands Soil	KALARADPPPDAIVATAGTAATVERAWERAGRPGILVLVSDDPDPVAVRLDLRPWGADRLRLIEPGASGGAPRPDLFPSANPLG*
Ga0134109_103742862	3300010320	Grasslands Soil	DQAGRPGTLVYLTDDPDPVAVRLDLRPWGGERLALTEEGATGSAPRTDLFRSGNPLA*
Ga0134067_101180061	3300010321	Grasslands Soil	RVTGGSAVEKALARADPPPDAIVATAGAAATVERAWERAGRPGLLVLLSDDPDPVAVRLDLRPWGADRLRLVEPGGRGVAPRPDLFPSANPLG*
Ga0134063_106668951	3300010335	Grasslands Soil	DAIVATVGAAATVERAWERAGRPGILVLLSDDPDPVAVRLDLRPWGADRLRLIEPGASGGAPRPDLFPSANPLG*
Ga0134071_100792433	3300010336	Grasslands Soil	AAAAPAAVQAWTRVGRRGVLTSLSDDPDPVAVRLDLRPWGAGRLLLVEPDATGLAPRSDLFPTANPLP*
Ga0134071_101478723	3300010336	Grasslands Soil	RPSLPDAIVATTAAAGDVVAAWERAGRPGVLVLLSDDPDPVAVRLDLRPWGGERLRLAEPGAAGLAPRGDIFPGPGASNPLA*
Ga0134071_107493361	3300010336	Grasslands Soil	PAAEQAWTRAGRHGLLVKLADDPDPVAVRLDLRPWGYDRLRLVEPGAAGLAPRADVFVAANPLP*
Ga0134066_103157061	3300010364	Grasslands Soil	QAWTRGGRRGVLTSLSADPDPVAVRLDLRPWGAGRVRLVEPGAAGLAPRSDLFPSANPLP
Ga0134125_109568431	3300010371	Terrestrial Soil	PDAIVATATAAAAAEQAWAHAGRAGVLTSLSDDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSANPLP*
Ga0137392_115074222	3300011269	Vadose Zone Soil	AATPPDAIVAAPTAAPFVERAWQRAGRPGVLVLLSDDPDPVAVRLDLRPWGYERLRLAEPGAAGLAPRPDLFPEANPLP*
Ga0137364_111686622	3300012198	Vadose Zone Soil	SRAAAATREAWERAGRPGALVYLTEDPDPVAVRLDLRPWGGERLALTEEGATGSAPRADLFRSGNPLA*
Ga0137380_109450152	3300012206	Vadose Zone Soil	HPAAPAAERAWTRAGRPGVLAYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRPDLFPSANPLG*
Ga0137380_112190992	3300012206	Vadose Zone Soil	QQAWTRGGRRGVLTSLSADPDPVAVRLDLRPWGAGRVLLVEPDATGLAPRSDLFPTANPLP*
Ga0137381_107296351	3300012207	Vadose Zone Soil	AAAAREAWEGAGRPGALLYRSDDPDPVAVRLDLRPWGGDRLALVEEGAAGLPPRADLFPSGKPLA*
Ga0137381_108995732	3300012207	Vadose Zone Soil	SPPDAIVATAAAAPAAEQAWERVGRPGVLAYLSNDPDPVAVRLDLRPWGYEWLRLVEPGAAGLTPRSDLFPAANPLP*
Ga0137378_109170402	3300012210	Vadose Zone Soil	ARPDAIVATAAAAAEAERAWERAGRPGVLVLLSDDPDPVAVRLDVRPWGHERLRLTEPGASGLAPRSDLFPEANPLA*
Ga0137370_100601641	3300012285	Vadose Zone Soil	AAQEAWTRVGRRGVLTSLSDDPDPVAVRLDLRPWGAGRVLLVEPDATGLAPRSDLFPTANPLP*
Ga0137386_102775193	3300012351	Vadose Zone Soil	DPTPDAIVATVGAAATVERAWERAGRPGLLVLLSDDPDPVAVRLDLRPWGADRLRLVEPGASGVAPRPDLFPSANPLG*
Ga0137367_105287753	3300012353	Vadose Zone Soil	PDAIVATAAAAPAAEEAWARAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRLLLVEPGAAGLAPRSDLFPSANPLA*
Ga0137367_110661481	3300012353	Vadose Zone Soil	IANALNRAEPPDAIVATAAAAAAAEQAWDRIGRPGRLTALSDDPDPVAVRLDLRPWGYERLLLVEPGAAGLAPRADLFPSANPLA*
Ga0137366_101775953	3300012354	Vadose Zone Soil	GAVEQPWADRRERPDGVVATMAAGPDVQAAWEHAGRPGVLALLSDDPDPVAVRLDLRPWGHDRLKLAEPDAAGLAPRPDLFPPHNPLG*
Ga0137368_100886703	3300012358	Vadose Zone Soil	VATAAAAPAAEEAWARAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRLLLVEPGAAGLAPRSDLFPSANPLA*
Ga0137375_102014311	3300012360	Vadose Zone Soil	DAIVATAAAAAAAEQAWDRIGRPGRLTALSDDPDPVAVRLDLRPWGYERLLLVEPGAAGLAPRADLFPSANPLA*
Ga0137360_102505371	3300012361	Vadose Zone Soil	EKALGQPVPPDAMVATARAAPAAQQAWGRAGRPGVLAALSDDPDPVAIRLDLRPWGAGRLLLVEPDAAGLAPRADLFPAANLLP*
Ga0134056_11479583	3300012397	Grasslands Soil	EQAWARAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRLLLVEPDATGLAPRSDLFPTANPLP*
Ga0137373_110708512	3300012532	Vadose Zone Soil	GPDVQAAWEHAGRPGVLALLSDDPDPVAVRLDLRPWGHDRLKLAEPDAAGLAPRPDLFPPHNPLG*
Ga0137398_105249061	3300012683	Vadose Zone Soil	QAWAHAGRAGVLTSLSDDPDPVAVRLDLRPWGAGRVVLVEPGAAGLAPRSDLFPSANPLP
Ga0137394_106547831	3300012922	Vadose Zone Soil	EQTWLRAGRPGVLAALSDDPDPVAVRLDLRPWGAGRMLLVEPGAAGLAPRPDLFPSANPLA*
Ga0137404_103836091	3300012929	Vadose Zone Soil	AWADAGRPGVLTSLSADPDPIAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSANPLP*
Ga0134077_101007631	3300012972	Grasslands Soil	PDVQAAWEHAGRPGVLALLSDDPDPVAVRLDLRPWGHERLKLAEPDAAGLAPRPDLFPPHNPLG*
Ga0134077_104414822	3300012972	Grasslands Soil	AIVATAAAADAAEQAWTRAGRHGLLVKLSDDPDPVAVRLDLRPWGYDRLRLVEPGAAGLAPRADVFVAANPLP*
Ga0134110_101552261	3300012975	Grasslands Soil	WERAGRPGLLVLLSDDPDPVAVRLDLRPWGADRLRLVEPGASGVAPRPDLFRSANPLG*
Ga0134087_100500111	3300012977	Grasslands Soil	WADAGRPGVLTSLSEDPDPIAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSANPLP*
Ga0134075_102531413	3300014154	Grasslands Soil	AAEEAWARAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSANPLP*
Ga0137418_104105411	3300015241	Vadose Zone Soil	VATAAAAPAAEQTWLRAGRPGVLAALSDDPDPVAVRLDLRPWGAGRLLLVEPGAAGLAPRSDLFPAANPLP*
Ga0137418_111987631	3300015241	Vadose Zone Soil	WVRAGRPGVLVSLSDDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLLPPANPLP*
Ga0134073_100583981	3300015356	Grasslands Soil	AWTRGGRRGVLTSLSADPDPVAVRLDLRPWGAGRLLLVEPDATGLAPRSDLFPTANPLP*
Ga0134072_104088522	3300015357	Grasslands Soil	RPGERPDAIVALHPAAPAAERAWTRAGRPGVLAYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRPDLFPSANPLG*
Ga0134085_101455163	3300015359	Grasslands Soil	VVERAWQRAGRPGVLVLLSDDPDPVAVRLDLRPWGHERLRLAEPGAAGVAPRPDLFPEANPLP*
Ga0134085_102353471	3300015359	Grasslands Soil	QPAPPDAIVATAAAAPAAEQAWARAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRVRLVEPGAAGLAPRSDLFPFANPLP*
Ga0134085_105515561	3300015359	Grasslands Soil	VAAAATERAWERAGRPGVLVLLSDDPDPVAVRLDVRPWGHERLRLTEPGATGLAPRSDLFPEANPLA*
Ga0134083_104273662	3300017659	Grasslands Soil	VATTAAAGDVVAAWERAGRPGVLVLLSDDPDPVAVRLDLRPWGGERLRLAEPGAAGLAPRGDIFPGPGASNPLA
Ga0187777_112325211	3300017974	Tropical Peatland	TPRAAAATRDAWIGAGRHGALVYIGRDPDPVAVRLDLRPWGGEQVILTEEGATGRGPRMDLFRSVNPLA
Ga0066667_104152951	3300018433	Grasslands Soil	AIVATAAAAPAAQQAWARAGRPGVLTFLSDDPDPVAVRLDLRPWSAGRLLLVEPGAAGLAPRSDLFPSANPLP
Ga0066667_104629352	3300018433	Grasslands Soil	MSIKLAVPCLLLLAGPAVAADPLPDAIVATAGTAATVERAWERAGRPGILVLLSDDPDPIAVRLDLRPWGADRLRLIEPGASGGAPRPDLFPSANPLG
Ga0066667_115812151	3300018433	Grasslands Soil	AAVEKALAHAAAPPDAIVAAPTVAAVVERAWQRAGRPGVLVLLSDDPDPVAVRLDLRPWGHERLRLAEPGAAGVAPRPDLFPEANPLP
Ga0066669_100067011	3300018482	Grasslands Soil	ILATPRAAAATRDAWDQAGRPGTLVYLTDDPDPVAVRLDLRPWGGERLALTEEGATGSAPRTDLFRSGNPLA
Ga0066669_112607602	3300018482	Grasslands Soil	IVALHPAAPAAERAWTRAGRPGVLTYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRPDLFPSANPLG
Ga0193713_12012571	3300019882	Soil	VATATAAAAAEQAWAHAGRAGVLTSLSDDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSANPLP
Ga0215015_102362659	3300021046	Soil	VYKRQTQAWQRAGRPGVLAFLSDDPDPVAVRLDLRPWGYERLRLVEPDGAGLAPRPDLFPASNPLP
Ga0210382_102465472	3300021080	Groundwater Sediment	GNAAAIEKALGGRRRPPDAIVATAVAALAAEQAWVRAGRPGVLVSLSDDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLLPSANPLP
Ga0247665_10072491	3300024219	Soil	PDAIVATAAAASAAEQAWTRAGRPGLLVAMSDDPDPVAVRLDLRPWGYDRLRLVEPGAAGLAPRVDLFVAANPLA
Ga0137417_10375693	3300024330	Vadose Zone Soil	AAADAQHAWERAGRPGVLTSLSDDPDPVAVRLDLRPWAAGRILLVEPGAAGLLPRPDLFPSANPLA
Ga0179591_10215175	3300024347	Vadose Zone Soil	VPPDAIVATATAAAAAQDAWAHAGRPGVLTSLSDDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSSNPLP
Ga0209520_101002114	3300025319	Soil	SAAAAGRAVAAWERAGRPGVLVLLTDDPDPVAVRLDLRPWGFDRLKLTEPGAVGLRPRPDLFPSANPLA
Ga0207684_104250731	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ERPDAIVAAPAAAPAAEQAWTRAGRPGVLAYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRPDLFPSANPLG
Ga0207646_106680471	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ATEQAWTRAGRPGVLAYLSDDPDPVAVRLDLRPWGYERVRLMEPGAAGLAPRPDLFPSANPLG
Ga0209350_11602551	3300026277	Grasslands Soil	AAQQAWGRAGRPGVLAALSNDPDPIAVRLDLRPWGAGRLLLVEPDAAGLAPRADLFPAANPLP
Ga0209688_10945051	3300026305	Soil	NTAALDKALDRPGERPDAIVALHPAAPAAERAWTRAGRPGVLTYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRPDLFPSANPLG
Ga0209239_100060322	3300026310	Grasslands Soil	ALPDAIVATAAAAPAAQQAWGRAGRPGVLAALSNDPDPIAVRLDLRPWGAGRLLLVEPDAAGLAPRADLFPAANPLP
Ga0209239_10951341	3300026310	Grasslands Soil	EQAWERAGRPGVLAALSADPDPVAVRLDLRPWGGDRLRLVEPGAAGLAPRADLFPSANPL
Ga0209239_13377441	3300026310	Grasslands Soil	TVERAWERAGRPGILVLLSDDPDPVAVRLDLRPWGADRLRLIEPGASGGAPRPDLFPSANPLG
Ga0209761_12587271	3300026313	Grasslands Soil	GSAVEKALARADPPPDAIVATVGAAATVERAWERAGRPGLLVLLSDDPDPVAVRLDLRPWGADRLRLVEPGASGVAPRPDLFPSANPLG
Ga0209761_12649731	3300026313	Grasslands Soil	APAATPPDAIVAAPTAAPFVERAWQRAGRPGVLVLLSDDPDPVAVRLDLRPWGYERLRLAEPGAAGLAPRPDLFPEANPLP
Ga0209155_10833343	3300026316	Soil	PDAIVATAGAAATVERAWERAGRPGILVLLSKDPDPVAVRLDLRPWGADRLRLVEPGGHGVAPRPDLFPSANPLG
Ga0209131_10529593	3300026320	Grasslands Soil	AKALGQSVPPDAIVATAAAAAAAQHAWERAGRPGVLTSLSDDPDPVAVRLDLRPWAAGRILLVEPGAAGLAPRPDLFPSANPLA
Ga0209472_11493621	3300026323	Soil	ATRDAWDQAGRPGTLVYLTDDPDPVAVRLDLRPWGGERLALTEEGATGSAPRTDLFRSGNPLA
Ga0209472_11650573	3300026323	Soil	PAALEKALGRPDERPDAIVAAHPAAAAAEQAWTRAGRPGVLTYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRSDLFPSGNPLG
Ga0209470_11751201	3300026324	Soil	MAAGPDVQAAWEHAGRPGVLALLSDDPDPVAVRLDLRPWGHDRLKLAEPDAAGLAPRPDLFPRHNPLG
Ga0209152_102177971	3300026325	Soil	TEQAWTRAGRPGVLAYLSDDPDPVAVRLDLRPWGHERVRLMEPGAAGLAPRPDLFPSANPLG
Ga0209152_102264391	3300026325	Soil	HPAAPAAERAWTRAGRPGVLTYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRPDLFPSANPLG
Ga0209473_12450751	3300026330	Soil	QQAWTRGGRRGVLTSLSADPDPVAVRLDLRPWGAGRLLLVEPDATGLAPRSDLFPTANPL
Ga0209159_11000973	3300026343	Soil	PAAQQAWTRGGRRGVLTSLSADPDPVAVRLDLRPWGAGRLLLVEPDATGLAPRSDLFPTANPLP
Ga0209808_10351253	3300026523	Soil	LDKALNRPEERPDAIVALHAAAPAAERAWTRAGRPGVLAYLSDDPDPVAVRLDLRPWGFERLRLMEPGAAGLAPRPDLFPSANPLG
Ga0209690_11653272	3300026524	Soil	GTATAIEKALGRSPRPDAIVATAAAADAAEQAWTRAGRHGLLVKLSDDPDPVAVRLDLRPWGYDRLRLVEPGAAGLAPRADVFVAANPLP
Ga0209805_13345362	3300026542	Soil	AIEKALGQPALPDAIVATAAAAPAAQQAWGRAGRPGVLAALSNDPDPIAVRLDLRPWGAGRLLLVEPDAAGLAPRADLFPAANPLP
Ga0209648_1000550611	3300026551	Grasslands Soil	AATEDAWGRGGRRGVLVWLSDDPDPVAVRLDLRPWGHERLRLVEPGGAGLAPRPDLFPSSNPLA
Ga0209884_10153681	3300027013	Groundwater Sand	AIVATAAAAGSAVAAWERAGRPGVLVLLTDDPDPVAVRLDLRPWGFDRLKLTEPGAVGLRPRPDLFPSANPLA
Ga0209845_10465531	3300027324	Groundwater Sand	IVATAAAAGSAVAAWERAGRPGVLVLLTDDPDPVAVRLDLRPWGFDRLKLTEPGAVGLRPRPDLFPSANPLA
Ga0209178_10243121	3300027725	Agricultural Soil	AATIEKALGRSPRPDAIVATAAAATAAEQAWTRAGRHGVLVTLSDDPDPVAVRLDLRPWGYDRLRLVEPGAAGLAPRADVFVAANPLP
Ga0209073_101208361	3300027765	Agricultural Soil	GPRPDAIVATAAAASAAEQAWTRAGRPGLLVAMSDDPDPVAVRLDLRPWGYDRLRLVEPGAAGLVPRVDLFVAANPLA
Ga0209701_103040911	3300027862	Vadose Zone Soil	DAIVATAAAAADAQHAWERAGRPGVLTSLSDDPDPVAVRLDLRPWAAGRILLVEPGAAGLPPRPDLFPSANPLA
Ga0209590_100711353	3300027882	Vadose Zone Soil	SVPRDVIVATAAAAADAQHAWERAGRPGVLASLSDDPDPVAVRLDLRPWAAGRILLVEPGAAGLPPRPDLFPSANPLP
Ga0247685_10347041	3300028065	Soil	LGRAPRPDAIVATAAAASAAEQAWTRAGRPGLLVAMSDDPDPVAVRLDLRPWGYDRLRLVEPGAAGLAPRVDLFVAANPLA
Ga0307296_102636021	3300028819	Soil	IVATAAAGPEAEQAWARAGRPGVLVTLSDDPDPVAVRLDLRPWGYERLRLVEPGAAGLAVRVDLLPSANPLG
Ga0307469_111515322	3300031720	Hardwood Forest Soil	KTLERPAERPDAIVAAPAAARAAEQAWTRAGRPGVLTYLSDDPDPVAVRLDLRPWGYERLRLMEPGAAGLAPRPDLFPSGNPLG
Ga0307473_100473675	3300031820	Hardwood Forest Soil	DAIVATAAAAADAQHAWEQAGRPGVLTSLSDDPDPVAVRLDLRPWAAGRILLVEPGAAGLAPRPDLFPSANPLA
Ga0307471_1002237864	3300032180	Hardwood Forest Soil	AAAAEEAWAHAGRAGVLTSLSNDPDPVAVRLDLRPWGAGRVLLVEPGAAGLAPRSDLFPSANPLP
Ga0307471_1005292723	3300032180	Hardwood Forest Soil	AAAAAAEQAWTHAGRHGVLVTLSDDPDPVAVRLDLRPWGYDRLRLVEPGAAGLTPRVDLFLAANPLP
Ga0307472_1000625581	3300032205	Hardwood Forest Soil	AWTRAGRHGVLVALSDDPDPVAVRLDLRPWGYDRLRLVEPGAAGLTPRADVFVAANPLP
Ga0307472_1003209341	3300032205	Hardwood Forest Soil	AAAADAQHAWEQAGRPGVLTSLSDDPDPVAVRLDLRPWAAGRILLIEPGAAGLAPRPDVFPSANPLA
Ga0335077_100786424	3300033158	Soil	LWERAGKPGTFVCLSEDPDPVAVRLDLRPWGGEYVALAEFGATGLKPRPDLFPSSGQSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056473

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences