NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F056472

Metagenome / Metatranscriptome Family F056472

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F056472
Family Type Metagenome / Metatranscriptome
Number of Sequences 137
Average Sequence Length 73 residues
Representative Sequence KPNRFSLDDKKTDFVVVSPKAPAPVEELLGKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA
Number of Associated Samples 88
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Archaea
% of genes with valid RBS motifs 1.54 %
% of genes near scaffold ends (potentially truncated) 94.16 %
% of genes from short scaffolds (< 2000 bps) 78.83 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (93.431 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(36.496 % of family members)
Environment Ontology (ENVO) Unclassified
(50.365 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.474 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96
1JGI25385J37094_100073747
2JGI25383J37093_100205694
3JGI25383J37093_100293832
4JGI25383J37093_100801693
5JGI25383J37093_100801882
6JGI25382J37095_100092671
7JGI25382J37095_101039301
8JGI25382J37095_101632822
9JGI25382J37095_102020532
10JGI25382J43887_103065031
11JGI25390J43892_100796602
12JGI25390J43892_101311321
13JGI25390J43892_101395752
14JGI25386J43895_101476702
15Ga0066672_107095401
16Ga0066680_101921043
17Ga0066679_104229791
18Ga0066690_100839873
19Ga0066688_102438503
20Ga0066685_101347671
21Ga0066678_103436382
22Ga0066678_107551052
23Ga0070697_1001251973
24Ga0066697_101116081
25Ga0066701_101671773
26Ga0066695_106808322
27Ga0066661_101261241
28Ga0066704_100074241
29Ga0066704_102086263
30Ga0066700_100923143
31Ga0066691_107167752
32Ga0066706_109627032
33Ga0066658_102673493
34Ga0066659_115427531
35Ga0079220_120272621
36Ga0099791_103265842
37Ga0099794_102180071
38Ga0099829_100010681
39Ga0099829_1000265211
40Ga0099829_100121201
41Ga0099829_103000401
42Ga0099829_104786313
43Ga0099829_107909171
44Ga0099828_102407931
45Ga0099828_103828881
46Ga0099828_108729272
47Ga0099828_109879071
48Ga0099827_110839821
49Ga0066709_1024682641
50Ga0134070_101465072
51Ga0134070_101610171
52Ga0134109_100463051
53Ga0134086_101627971
54Ga0126370_112123552
55Ga0126378_101755904
56Ga0126378_114504371
57Ga0150983_134389351
58Ga0137391_111719561
59Ga0137389_116792892
60Ga0137365_111851672
61Ga0137365_113276781
62Ga0137399_106189382
63Ga0137380_101713701
64Ga0137379_104268213
65Ga0137379_112561171
66Ga0137379_116851602
67Ga0137378_116965481
68Ga0137377_106448241
69Ga0137377_106866711
70Ga0137387_101477211
71Ga0137387_105031952
72Ga0137386_101043233
73Ga0137386_110599531
74Ga0137367_104932061
75Ga0137367_106870561
76Ga0137385_105827961
77Ga0137385_110134691
78Ga0137385_114629701
79Ga0137360_101460153
80Ga0137360_101557691
81Ga0137360_106530021
82Ga0137390_110141701
83Ga0137390_116784571
84Ga0134057_12287531
85Ga0137396_103325791
86Ga0137396_111407291
87Ga0137416_101760703
88Ga0137416_102112411
89Ga0134077_104718362
90Ga0134077_105612622
91Ga0134076_100457191
92Ga0134081_103534162
93Ga0134072_101925892
94Ga0134112_102274722
95Ga0066662_110569902
96Ga0066662_120247791
97Ga0213870_11076312
98Ga0209341_106695571
99Ga0209341_107211632
100Ga0209341_110351522
101Ga0209342_111592942
102Ga0209751_109435261
103Ga0209235_10978493
104Ga0209239_10360564
105Ga0209761_10069469
106Ga0209761_11595651
107Ga0209154_10125306
108Ga0209154_10256434
109Ga0209154_12793132
110Ga0209471_10242094
111Ga0209152_101775202
112Ga0209801_10191981
113Ga0209801_12893131
114Ga0209267_13341912
115Ga0209057_12077902
116Ga0257180_10502291
117Ga0257181_10152981
118Ga0209690_10305921
119Ga0209690_10497433
120Ga0209160_10098708
121Ga0209157_13064362
122Ga0209376_13209191
123Ga0209648_102205921
124Ga0209577_100892591
125Ga0209577_101659543
126Ga0209388_11022152
127Ga0209388_11642521
128Ga0209689_13252212
129Ga0209180_100388914
130Ga0209590_101466663
131Ga0209590_104685302
132Ga0137415_100280011
133Ga0137415_112192521
134Ga0247727_110082872
135Ga0307471_1018550112
136Ga0307471_1019014781
137Ga0307471_1021169271
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.41%    β-sheet: 6.12%    Coil/Unstructured: 73.47%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070KPNRFSLDDKKTDFVVVSPKAPAPVEELLGKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
94.9%5.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Biofilm
36.5%8.0%26.3%16.1%3.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1000737473300002558Grasslands SoilRFSLDDKKTDFIVVSPKAPVAVEEFLDKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPLVV*
JGI25383J37093_1002056943300002560Grasslands SoilKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPVAVEEFLDKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPLVV*
JGI25383J37093_1002938323300002560Grasslands SoilVVVSRKAPAAIEQFLSKTRIKFYRNIDDALRSMDSKLYERDVAVIPYGSSTVPIAS*
JGI25383J37093_1008016933300002560Grasslands SoilLKKRAKLGKVTEASXKPNRLSLDYQKADLMVVSPKAPSTVPDLLAKTRIRFFRKIDEALTTIDKKLYERDVAVLPHGSSTVPLTA*
JGI25383J37093_1008018823300002560Grasslands SoilEDLKKRVKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPAPVEELLNKTRVKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAS*
JGI25382J37095_1000926713300002562Grasslands SoilLKKRAKAGRVTEASQKPNRLAIDDGKANFAVVSPKAPAVVEQFLGKTRIGFYRTIDDALRSMDSKLYERDVAVIPFGSSTVPIAS*
JGI25382J37095_1010393013300002562Grasslands SoilPEMVIEDLKKRAKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPPPVEEFLNKTRIMFFRSIDDAVRTLDQKLYEKDVAVIPYGSSTVPVAT*
JGI25382J37095_1016328223300002562Grasslands SoilLDDGKTDYAVVSPKAPAIVEDFLRKTRIRFHRTIDDALRSMDSKLYERDVALIPYGSSTVPVVAWA*
JGI25382J37095_1020205323300002562Grasslands SoilKTDFIVVSPKAPAPVEELLNKTRVKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAS
JGI25382J43887_1030650313300002908Grasslands SoilDLKKRVKLGKVTEASQKPNRFSLDDKKTDFIVVSPRAPAPVEELLSKTRIKFFRSIDDALRTLDQKLHEKDVAVIPYGSSTVPVAT*
JGI25390J43892_1007966023300002911Grasslands SoilKVTEASQKPNRLAIDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDSKLYEWDVAIIPYGSSTVPVAS*
JGI25390J43892_1013113213300002911Grasslands SoilRVTEASQKPNRLAIDDGKANFAVVSPKAPAVVEQFLGKTRIGFYRTIDDALRSMDSKLYERDVAVIPFGSSTVPIAS*
JGI25390J43892_1013957523300002911Grasslands SoilPKAPTVVEEFLGKTRIKFYRTIDDALRSMDSKLYERDVALIPYGSSTVPVSS*
JGI25386J43895_1014767023300002912Grasslands SoilDANKTDFVVVSPKAPTPVEELLSKTRIRFFRSIDDALRTLDHTLYENDVAVIPYGSSTVPVAA*
Ga0066672_1070954013300005167SoilDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYQRDVAIIPYGSSTVPVAS*
Ga0066680_1019210433300005174SoilFALDDPKADFLVVSPRAPSVVEEFLGRTRIRFYRTIDDALRSLDSKLYERDVAIVPYGSATVPLSS*
Ga0066679_1042297913300005176SoilAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYEREVAIIPYGSSTVPITS*
Ga0066690_1008398733300005177SoilGKVTEASQKPNRFSLDDKKTDFVVVSPKAPAPVEELLGKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA*
Ga0066688_1024385033300005178SoilRLAIDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDSKLYEWDVAIIPYGSSTVPVAS*
Ga0066685_1013476713300005180SoilMVVEDLKKRAKLGKVTEASQKPNRFSLDAKKTDFVVVSPKAPAPVEELLSKTRIKFFRSIDDALRTLDPTLYEKDVAVIPYGSSTVPVAA*
Ga0066678_1034363823300005181SoilEDLKKRAKAGKVTEASQKPNRFALDDPKADFLVVSPRAPSVVEEFLGRTRIRFYRTIDDALRSLDSKLYERDVAIVPYGSATVPLSS*
Ga0066678_1075510523300005181SoilDLKKRAKAGKVTEASQKPNRLALDDAKTDFAVVSPKAPPVVEEFLAKTRIKFYRTIDDALRSTDSKLYERDVAIIPYGSSTVPIAS*
Ga0070697_10012519733300005536Corn, Switchgrass And Miscanthus RhizosphereNRFALDDGKTEYAVVSPKAPAVVEDFLSKTRIRFYRAIDDALRSMDSKLYERDVALIPYGSSTVPVVA*
Ga0066697_1011160813300005540SoilAKLGKVTEASQKPNRFSLDAKKTDFVVVSPKAPAPVEELLSKTRIKFFRSIDDALRTLDPTLYEKDVAVIPYGSSTVPVAA*
Ga0066701_1016717733300005552SoilKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPAPVEELLNKTRVKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAS*
Ga0066695_1068083223300005553SoilLKKRAKAGKVTEASQKPNRLALDDAKTDFAVVSPKAPTVIEEFLGKTRIKFYRTIDDALRSMDSKLYEQDVALIPYGSSTVPVSP*
Ga0066661_1012612413300005554SoilDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYERDVAIIPYGSSTVPIAS*
Ga0066704_1000742413300005557SoilLDDAKTDFAVVSPKAPSVVEEFLGKTRIRFYRTIDDALRSMDSKLYERDVGMIPYGSSTIPVAT*
Ga0066704_1020862633300005557SoilLKKRVKLGKVTEASQKPNRFSLDDKKTDFVVVSPKAPAPVEELLGKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAT*
Ga0066700_1009231433300005559SoilDDKKTDFIVVSPQAPAAVEELLNKTRVKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA*
Ga0066691_1071677523300005586SoilGKVTEASQKPNRFSLDDKKTDFIVVSPIAPPPVEEFLGKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA*
Ga0066706_1096270323300005598SoilDDAKTDFAVVSPKAPPVVEEFLGKTRIRFYRTIDDALRSMDTKLYERDVAIIPYGSSTVPVAS*
Ga0066658_1026734933300006794SoilQKPNRLALDDAKTDFAVVSPKAPTVVEEFLSKTQIRFYRAIDDALRTMDSKLYERDVAVIPYGSSTVPVSSGA*
Ga0066659_1154275313300006797SoilNRLAIDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYEREVAIIPYGSSTVPIAS*
Ga0079220_1202726213300006806Agricultural SoilGKVTEASQKPNRLALDDPKADFVVVSPRAPTVVEDFLAKTRIRFFRAIDDALRSVDSKLYEKDVAVMPYGSATVPILS*
Ga0099791_1032658423300007255Vadose Zone SoilTEASQKPNRFSLDDKKTDFIVISPKAPVVVEEFLNKTRIKFFRSIDDALRTLDQKLYERDVAVIPYGSSTVPVAA*
Ga0099794_1021800713300007265Vadose Zone SoilDKKTDFIVISPKAPLAVEELLNKTRIKFFRSIDDALRTLDQKLYERDVAVIPYGSSTVPVAA*
Ga0099829_1000106813300009038Vadose Zone SoilAIDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRLMDTKLYERDVAVIPYGSSTVPIVS*
Ga0099829_10002652113300009038Vadose Zone SoilLGKVTEASQKPNRFSLDDKKTDFIVVSPTAPAAVEEFLNKTRIKFFRSIDDALRTLDPKLYENDVAVIPYGSSTVPVAA*
Ga0099829_1001212013300009038Vadose Zone SoilAIDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYERDVAIIPYGSSTVPIAS*
Ga0099829_1030004013300009038Vadose Zone SoilKRAKLGKVTEASQKPNRLSLDDKKADLMVVSSKAPSTVPDLLAKTRIRFFRKIDEALSTLDKKLYERDVAVLPHGSSTVPLTS*
Ga0099829_1047863133300009038Vadose Zone SoilAKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPTAVEEFLNKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA*
Ga0099829_1079091713300009038Vadose Zone SoilKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPAAVEEFLSKTRIKFFRLIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA*
Ga0099828_1024079313300009089Vadose Zone SoilAKLGKVTEASQKPNRFSLDGKKTDFIVISPKAPVAVEELLNKTRIKFFRSIDDALRTLDQKLYEKHVAVIPYGSSTVPVAS*
Ga0099828_1038288813300009089Vadose Zone SoilKKRAKTGKVTEASQKPNRFAIDEKKTDFIVVSPKAPKPVEELLSKTKMKFYRTIDEALGSLDKRLYERDVAVIPHGSSTVPVPS*
Ga0099828_1087292723300009089Vadose Zone SoilDLKKRAKLGKVTEASQKPNRLALDSKRTDFMVVSPKAPSQVEELLSKTQIRFYRSIDDALGSLDKRLYEREVAVIPHGSSTVPLTS*
Ga0099828_1098790713300009089Vadose Zone SoilKKRAKAGKVTEASQKPNRFALDHGKTDYAVVSPKAPAVVEDFLSKTRIRFHRTIDDALRSMDSKLYERDVAVIPYGSSTVPVVA*
Ga0099827_1108398213300009090Vadose Zone SoilDDKKTDFIVVSPKAPAAVEEFLSKTRIRFFRSIDDALRTLDQKLYENDVAVIPYGSSTVPVAA*
Ga0066709_10246826413300009137Grasslands SoilFSLDANKTDFVVVSPKAPTPVEELLSKTRIRFFRSIDDALRTLDHTLYENDVAVIPYGSSTVPVAA*
Ga0134070_1014650723300010301Grasslands SoilASQKPNRFALDDPKADFLVVSPKAPSAVEEFLGKTRIRFYRTIDDALRSLDSKLYDRDVAIVPYGSATVPLSS*
Ga0134070_1016101713300010301Grasslands SoilPNRFSLDANKTDFFVVSPKAPTPVEELLSKTRIKFFRSIDDALRTLDHTLYEKDVVVIPYGSSTVPVAS*
Ga0134109_1004630513300010320Grasslands SoilKPNRFALDDPKADFLVVSPKAPSAVEEFLGKTRIRFYRTIDDALRSLDSKLYDRDVAIVPYGSATVPLSS*
Ga0134086_1016279713300010323Grasslands SoilLDDPKADFLVVSPKAPSAVEEFLGKTRIRFYRTIYDALRSLDSKLYDRDVAIVPYGSATVPLSS*
Ga0126370_1121235523300010358Tropical Forest SoilAGKITEASQKPNRFALDEPRADFLVVSQKAPAPVEEFLNKTKVRFYRGIDDALKSLDPKLYEKDVAVIPYGSSTVPIST*
Ga0126378_1017559043300010361Tropical Forest SoilGKITEASQKPNRFALDEPRADFLVVSQKAPAPVEEFLNKTKVRFYRGIDDALKSLDPKLYEKDVAVIPYGSSTVPISS*
Ga0126378_1145043713300010361Tropical Forest SoilKMTEASQKPNRFSIDDKKTDFIVVSPKAPLAVEELLNKTRIKFFRAIDDALKTLEPKQYEKDVAVIPFGTSTVPVAT*
Ga0150983_1343893513300011120Forest SoilGKTDYAVVSPKAPAGVEDFLSKTRIRFYRTIDDTLRSMDSKLYEREVAVIPYGSSTVPVAS*
Ga0137391_1117195613300011270Vadose Zone SoilTEASQKPNRFALDDGKTDYAVVSPKAPAVIEDFLSKTRIRFHRTIDDALRSMDSKLYERDVAVIPYGSSTVPVVA*
Ga0137389_1167928923300012096Vadose Zone SoilPKAPSVVEEFLNKTRIRFYKTIDDALRSMDPKLYEREVAVIPHGSSTVPIAS*
Ga0137365_1118516723300012201Vadose Zone SoilDAKTDFAVVSPKAPTVVEEFLGKTRMKFYRTIDDALRSLDSKLYERDVAVIPYGSSTVPLSS*
Ga0137365_1132767813300012201Vadose Zone SoilNRFALDDPKADFLVVSPRAPSVVEEFLGRTRIRFYRTIDDALRSLDSKLYDRDVAIVPYGSATVPISS*
Ga0137399_1061893823300012203Vadose Zone SoilKLGKVTEASQKPNRFSLDDKKTDFIVVSPRAPVAVEEFLNKTRIKFFRSIDEALRTLDQKLYEKDVAVIPYGSSTVPVAA*
Ga0137380_1017137013300012206Vadose Zone SoilKTGKVTEASQKPNRLSLDDKRADLIVVSPKAPGSVEELLAKTRIKFFRSIDDALGSIDKWLYERDVAVIPHGSSTVPLPR*
Ga0137379_1042682133300012209Vadose Zone SoilLKKRVKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPAPVEELLSKTRIKFFRSIDDALRTLDQKQYEKDVAVIPYGSSTVPVAA*
Ga0137379_1125611713300012209Vadose Zone SoilKAGKVTEASQKPNRFALDDAKADFLVVSPQAPAVVEEFLGKTRIKFYRAVDDALKSLDPKLYEKDVAVLPYGSATVPISS*
Ga0137379_1168516023300012209Vadose Zone SoilLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPAAIEEFLNKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA*
Ga0137378_1169654813300012210Vadose Zone SoilNRFAIDEKKTGFIVVSPKAPKPIEELLSKTKMKFYRTIDEALGSLDRRLYERDVAVIPHGSSTVPVPS*
Ga0137377_1064482413300012211Vadose Zone SoilLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPAAVEEFLNKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA*
Ga0137377_1068667113300012211Vadose Zone SoilPKTDFLVVSPKAPSAVEEFLGKTRIKFYRTIDDALGSLDARLYERDVAIVPYGSATVPISS*
Ga0137387_1014772113300012349Vadose Zone SoilQKPNRFAIDEKKTDFIVVSPKAPKPVEELLSNTKMKFYRTIDEALGSLDKRLYERDVAVIPHGSSTVPVPS*
Ga0137387_1050319523300012349Vadose Zone SoilAKAGKVTEASQKPNRLALDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYERDVAIIPYGSSTVPIAS*
Ga0137386_1010432333300012351Vadose Zone SoilVVSPRAPSVVEEFLGKTRIRFYRAIDDALGSLDAKLYERDVAIVPYGSATVPLSS*
Ga0137386_1105995313300012351Vadose Zone SoilVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDSKLYERDVALIPYGSSTVPVSS*
Ga0137367_1049320613300012353Vadose Zone SoilKAGKVTEASQKPNRFALDDPKADFLVVSPKAPSAVEEFLGKTRIRFYRTIDAALRSLDSKLYDRDVAIVPYGSATVPLSS*
Ga0137367_1068705613300012353Vadose Zone SoilDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSLDSKLYERDVAVIPYGSSTVPVSS*
Ga0137385_1058279613300012359Vadose Zone SoilKRAKLGKVTEASQKPNRFSLDDKKTDFIVVSPQAPAAVEELLNKTRVKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA*
Ga0137385_1101346913300012359Vadose Zone SoilQKPNRLSLDDKRADLIVVSPKAPGSVEELLAKTRIKFFRSIDDALGSIDKWLYERDVAVIPHGSSTVPLPR*
Ga0137385_1146297013300012359Vadose Zone SoilPEMVIEDLKKRAKLGKVTEASQKPNRFSLDAPKTDFVVVSPKAPSPVEELLSKTRIKFFRSIDDALRTLDPTLYEKDVAVIPYGSSTVPVAA*
Ga0137360_1014601533300012361Vadose Zone SoilSPKAPSVVEEFLGKTRIRFYRTIDDALRSMDSKLYERDVGMIPYGSSTIPVAT*
Ga0137360_1015576913300012361Vadose Zone SoilKAEFVVVSPKAPAAVEEFLSKTRIRFYRTIDDALRSMDSKLYERDVALIPYGSSTVPVSS
Ga0137360_1065300213300012361Vadose Zone SoilGKTEYAVVSPKAPVAVEDFLSKTRIRFYRTIDDALRSIDSKLYERDVAVIPYGSSTVPVVA*
Ga0137390_1101417013300012363Vadose Zone SoilNRFALDDGKTDYAVVSPKAPAVVEDFLSKTRIRFHRTIDDALRSMDSKLYEREVAVIPYGSSTVPVVAWA*
Ga0137390_1167845713300012363Vadose Zone SoilKPNRFAIDEKKTDFIVVSPKAPKPVEELLSKTKMKFYRTIDEALGSLDKRLYERDVAVIPHGSSTVPVPS*
Ga0134057_122875313300012396Grasslands SoilNRFALDDPKADFLVVSPRAPSVVEEFLGRTRIRFYRTIDDALRSLDSKLYERDVAIVPYGSATVPLSS*
Ga0137396_1033257913300012918Vadose Zone SoilRFSLDAKKADFVVVSPKAPTLVEDLLNRTRIKFFRSIDDALRTLDHTLYEKDVAVIPYGSSTVPVAA*
Ga0137396_1114072913300012918Vadose Zone SoilKPNRFALDDGKTEYAVVSPKAPAAVEDFLSKTRIRFYRTIDDALRSIDSKLYERDVAVIPYGSSTVPVVA*
Ga0137416_1017607033300012927Vadose Zone SoilRFALDDGKTDYAVVSPKAPAVVEDFLSKTRIRFHRTIDDALKSMDSKLYERDVAVIPYGSSTIPVVA*
Ga0137416_1021124113300012927Vadose Zone SoilQKPNRLSLDDKKTDFIVVSPKAPAPVEEFLNKTRIKFFRSIDDALKTLDRKLYEKDVAVIPYGSSTVPVAA*
Ga0134077_1047183623300012972Grasslands SoilVTEASQKPNRFSLDANKTDFFVVSPKAPTPVEELLSKTRIKFFRSIDDALRTLDHTLYEKDVAVIPYGSSTVPVAS*
Ga0134077_1056126223300012972Grasslands SoilSQKPNRFALDDAKANFVVVSSKAPPMVEQFLSKTRIGFYRTVDDALRSIDSKLYEQDVAVIPYGSSTVPIAS*
Ga0134076_1004571913300012976Grasslands SoilDDGKADFAVVSPKAPTVIEQFLSKTRIKFYRNIDDALRSMDSKLYERDVAVIPYGSSTVPIAS*
Ga0134081_1035341623300014150Grasslands SoilVIEDLKKRAKLGKVTEASQKPNRLSLDYQKADLMVVSPKAPSTVPDLLAKTRIRFFRKIDEALTTIDKKLYERDVAVLPHGSSTV
Ga0134072_1019258923300015357Grasslands SoilGKVTEASQKPNRLALDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDSKLYEQDVALIPYGSSTVPVSP*
Ga0134112_1022747223300017656Grasslands SoilVIEDLKKRAKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPVAVEEFLDKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPLVV
Ga0066662_1105699023300018468Grasslands SoilVVSPRAPSVVEEFLGRTRIRFYRTIDDALRSLDSKLYERDVAIVPYGSATVPLSS
Ga0066662_1202477913300018468Grasslands SoilFSLDDKKTDFIVVSPKAPAPVEELLNKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAT
Ga0213870_110763123300021357FreshwaterTMVIEDLKKRAKLGKVTEASQKPNRLALDDAKTDFVVVSPKAPGAVEELLGKTRIRFFRTIDDALGSLDRRLYEREVAVMPHGSSTVPTTV
Ga0209341_1066955713300025325SoilSQKPNRLALDDAKTDFIVVGPKAPAAVEQLLAKTKIRFFRTIDDALGSLDRRLYEREVAVLPHGSSTVPVAA
Ga0209341_1072116323300025325SoilGKVTEASQKPNRLALDDARTDFLVVSPKAPAAVEQLLAKTRIRFFRTIDEALGSLDRRLWERDVAVLPHGSSTVPVAA
Ga0209341_1103515223300025325SoilDDAKTDFLVVSPKAPAAVEQLLEKTRIRFFRTIDEALGSLDRRLWERDVAVLPHGSSTVPVAA
Ga0209342_1115929423300025326SoilTEASQKPNRLALDDAKTDFIVVGPNAPAAVEQLLAKTKIRFFRTIDDALGSLDRRLWERDVAVLPHGSSTVPVAG
Ga0209751_1094352613300025327SoilEASQKPNRLALDDARTDFLVVSPKAPAAVEQLLAKTRIRFFRSIDEALGSLDRRLWERDVAVLPHGSSTVPVAG
Ga0209235_109784933300026296Grasslands SoilNRFSLDDKKTDFIVVSPKAPAPVEELLNKTRVKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAS
Ga0209239_103605643300026310Grasslands SoilLDDGKTEYAVVSPKAPAAVEDFLSKTRIRFYRTIDDALRSIDSKLYERDVAVIPYGSSTVPVVA
Ga0209761_100694693300026313Grasslands SoilEDLKKRAKLGKVTEASQKPNRFSLDANKTDFVVVSPKAPTPVEELLSKTRIRFFRSIDDALRTLDHTLYENDVAVIPYGSSTVPVAA
Ga0209761_115956513300026313Grasslands SoilEDLKKRAKLGKVTEASQKPNRFSLDANKTDFVVVSPKAPTPVEELLSKTRIKFFRSIDDALRTLDHTLYEKDVAVIPYGSSTVPVAA
Ga0209154_101253063300026317SoilKPNRFSLDDKKTDFVVVSPKAPAPVEELLGKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAA
Ga0209154_102564343300026317SoilKPNRFSLDDKKTDFVVVSPKAPAPVEELLGKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAT
Ga0209154_127931323300026317SoilDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYEREVAIIPYGSSTVPITS
Ga0209471_102420943300026318SoilTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDSKLYERDVAIIPYGSSTVPVAS
Ga0209152_1017752023300026325SoilLDDAKADFAVVSPKASSVVEEFLGKTRIKFYRTIDDALRSMDSKLYERDVGMIPYGSSTVPVAT
Ga0209801_101919813300026326SoilKKRVKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPAPVEELLNKTRVKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAS
Ga0209801_128931313300026326SoilIDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYEREVAIIPYGSSTVPITS
Ga0209267_133419123300026331SoilAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYERDVAIIPYGSSTVPIAS
Ga0209057_120779023300026342SoilLGKVTEASQKPNRFSLDAKKTDFVVVSPKAPAPVEELLSKTRIKFFRSIDDALRTLDPTLYEKDVAVIPYGSSTVPVAA
Ga0257180_105022913300026354SoilLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPVAVEEFLNKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAT
Ga0257181_101529813300026499SoilEASQKPNRFSLDDKKTDFVVVSTKAPAAVEEFLNKTRIKFFRSIDDALRTLDQTLYEKDVAVIPYGSSTVPVAA
Ga0209690_103059213300026524SoilMEPEMVIEDLKKRVKLGKVTEASQKPNRFSLDDKKTDFIVVSPKAPAPVEELLNKTRVKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAS
Ga0209690_104974333300026524SoilMEPEMVIEDLKKRVKLGKVTEASQKPNRFSLDDKKTDFIVVSPRAPAPVEELLSKTRIKFFRSIDDALRTLDQKLHEKDVAVIPYGSSTVPVAT
Ga0209160_100987083300026532SoilGKVTEASQKPNRLALDDAKTDFAVVSPKAPSVVEEFLGKTRIRFYRTIDDALRSMDSKLYERDVGMIPYGSSTIPVAT
Ga0209157_130643623300026537SoilIDEKKTDFIVVSPKAPKPVEELLTKTKMKFYRTIDEALGSLDRRLYERDVAVIPHGSSTVPVPS
Ga0209376_132091913300026540SoilKVTEASQKPNRFSLDANKTDFVVVSPKAPTPVEELLSKTRIKFFRSIDDALRTLDHTLYEKDVAVIPYGSSTVPVAA
Ga0209648_1022059213300026551Grasslands SoilAGKVTEASQKPNRFALDDGKTDYAVVSPKAPAVVEDFLSKTRIRFHRTIDDALRSMDSKLYEQDVAVIPYGSSTVPVVA
Ga0209577_1008925913300026552SoilPNRLAIDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYEREVAIIPYGSSTVPITS
Ga0209577_1016595433300026552SoilPNRLAIDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDSKLYERDVAIIPYGSSTVPVAS
Ga0209388_110221523300027655Vadose Zone SoilQKPNRFSLDDKKTDFIVISPKAPVVVEEFLNKTRIKFFRSIDDALRTLDQKLYERDVAVIPYGSSTVPVAA
Ga0209388_116425213300027655Vadose Zone SoilKLGKVTEASQKPNRFSLDDKKTDFIVISPKAPAAVEELLNKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAS
Ga0209689_132522123300027748SoilQKPNRLALDDAKTDFAVVSPKAPTVVEEFLSKTQIRFYRAIDDALRTMDSKLYERDVAVIPYGSSTVPVSSGA
Ga0209180_1003889143300027846Vadose Zone SoilDDAKTDFAVVSPKAPTVVEEFLGKTRIKFYRTIDDALRSMDTKLYERDVAIIPYGSSTVPIAS
Ga0209590_1014666633300027882Vadose Zone SoilNRFSLDDKKTDFIVVSPKAPTPVEEFLGKTRIKFFRSIDDALRTLDQKLYEKDVAVIPYGSSTVPVAT
Ga0209590_1046853023300027882Vadose Zone SoilTDYAVVSPKAPAVVEDFLSKTRIRFHRTIDDALRSMDSKLYERDVALIPYGSSTVPVVA
Ga0137415_1002800113300028536Vadose Zone SoilSQKPNRLALDDAKTDFAVVSPKAPIMVEEFLSKTRIRFYRTIDDALRSLDSKLYERDVAVIPYGSSTVPVSS
Ga0137415_1121925213300028536Vadose Zone SoilQKPNRLSLDDKKTDFIVVSPKAPAPVEEFLNKTRIKFFRSIDDALKTLDRKLYEKDVAVIPYGSSTVPVAA
Ga0247727_1100828723300031576BiofilmKLGKVTEASQKPNRLALDDAKTDFVVVSPKAPGAVEELLGKTRIRFFRTIDDALGSLDRRLYEREVAVMPHGSSTVPTTV
Ga0307471_10185501123300032180Hardwood Forest SoilPNRFSLDDKKTDFIVVSPKAPAVVEEFLNKTRIKFFRSIDDALRTLNQKSYEKDVAVIPYGSSTVPVAA
Ga0307471_10190147813300032180Hardwood Forest SoilPNRFALDDAKTEYAVVSPKAPAVVEDFLSKTRIGFYRTIDDALRSIDSKLYDRDVAVIPYGSSTVPVVA
Ga0307471_10211692713300032180Hardwood Forest SoilRFALDDAKTEYAVVSPKAPAVVEDFLSKTRIRFYRTIDDALRSIDSKLYDRDVAVIPYGSSTVPVVA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.