Metagenome / Metatranscriptome Family F056458

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056458
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	97 residues
Representative Sequence	MSMLFSRTAMIPVWLFVFGLFVIIGSPMAFATGLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPNSGFRNSRQRGTGG
Number of Associated Samples	103
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.10 %
% of genes near scaffold ends (potentially truncated)	20.44 %
% of genes from short scaffolds (< 2000 bps)	65.69 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.350 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (37.956 % of family members)
Environment Ontology (ENVO)	Unclassified (56.934 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.394 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.10% β-sheet: 0.00% Coil/Unstructured: 62.90%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00011	HSP20	31.39
PF00118	Cpn60_TCP1	7.30
PF13545	HTH_Crp_2	5.84
PF01381	HTH_3	4.38
PF00166	Cpn10	2.92
PF13560	HTH_31	2.19
PF02817	E3_binding	2.19
PF13519	VWA_2	1.46
PF13473	Cupredoxin_1	0.73
PF04143	Sulf_transp	0.73
PF00198	2-oxoacid_dh	0.73
PF12704	MacB_PCD	0.73
PF07995	GSDH	0.73
PF01850	PIN	0.73
PF00306	ATP-synt_ab_C	0.73
PF11154	DUF2934	0.73
PF13620	CarboxypepD_reg	0.73
PF13570	PQQ_3	0.73
PF00027	cNMP_binding	0.73
PF13432	TPR_16	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	31.39
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	7.30
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	2.92
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	2.92
COG0055	FoF1-type ATP synthase, beta subunit	Energy production and conversion [C]	0.73
COG0056	FoF1-type ATP synthase, alpha subunit	Energy production and conversion [C]	0.73
COG1155	Archaeal/vacuolar-type H+-ATPase catalytic subunit A/Vma1	Energy production and conversion [C]	0.73
COG1156	Archaeal/vacuolar-type H+-ATPase subunit B/Vma2	Energy production and conversion [C]	0.73
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.73
COG2391	Uncharacterized membrane protein YedE/YeeE, contains two sulfur transport domains	General function prediction only [R]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.53 %
Unclassified	root	N/A	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	44.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.38 %
Unclassified	root	N/A	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.73 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.73 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.73 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.53 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.38 %
Unclassified	root	N/A	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.73 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.73 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.73 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.53 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.38 %
Unclassified	root	N/A	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.73 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.73 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.73 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.53 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.38 %
Unclassified	root	N/A	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.73 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.73 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.73 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.53 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.38 %
Unclassified	root	N/A	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.73 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.73 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.73 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.53 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.38 %
Unclassified	root	N/A	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Deinococcus peraridilitoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus peraridilitoris	0.73 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.73 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.73 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10011731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4480	Open in IMG/M
3300005167\|Ga0066672_10010534	All Organisms → cellular organisms → Bacteria	4439	Open in IMG/M
3300005172\|Ga0066683_10040016	All Organisms → cellular organisms → Bacteria → Acidobacteria	2738	Open in IMG/M
3300005172\|Ga0066683_10205788	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300005172\|Ga0066683_10340332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300005174\|Ga0066680_10015964	All Organisms → cellular organisms → Bacteria → Acidobacteria	3997	Open in IMG/M
3300005174\|Ga0066680_10473839	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300005176\|Ga0066679_10093074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1820	Open in IMG/M
3300005177\|Ga0066690_10091788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1938	Open in IMG/M
3300005177\|Ga0066690_10450183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300005178\|Ga0066688_10320493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300005179\|Ga0066684_10060246	All Organisms → cellular organisms → Bacteria → Proteobacteria	2211	Open in IMG/M
3300005179\|Ga0066684_10665897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300005180\|Ga0066685_10036471	All Organisms → cellular organisms → Bacteria → Acidobacteria	3086	Open in IMG/M
3300005180\|Ga0066685_10307082	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300005186\|Ga0066676_10227736	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300005187\|Ga0066675_10172469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1501	Open in IMG/M
3300005445\|Ga0070708_100615526	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005447\|Ga0066689_10030701	All Organisms → cellular organisms → Bacteria → Acidobacteria	2738	Open in IMG/M
3300005450\|Ga0066682_10078080	All Organisms → cellular organisms → Bacteria → Acidobacteria	2053	Open in IMG/M
3300005451\|Ga0066681_10065856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2013	Open in IMG/M
3300005518\|Ga0070699_100010646	All Organisms → cellular organisms → Bacteria → Acidobacteria	7962	Open in IMG/M
3300005518\|Ga0070699_100379775	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300005536\|Ga0070697_100041061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3743	Open in IMG/M
3300005536\|Ga0070697_101316213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300005542\|Ga0070732_10187661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1234	Open in IMG/M
3300005552\|Ga0066701_10607694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300005556\|Ga0066707_10535310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300005557\|Ga0066704_10036261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3044	Open in IMG/M
3300005558\|Ga0066698_10034973	All Organisms → cellular organisms → Bacteria → Acidobacteria	3083	Open in IMG/M
3300005558\|Ga0066698_10186262	All Organisms → cellular organisms → Bacteria → Acidobacteria	1416	Open in IMG/M
3300005559\|Ga0066700_11117223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300005561\|Ga0066699_10008210	All Organisms → cellular organisms → Bacteria	4958	Open in IMG/M
3300005561\|Ga0066699_10556192	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300005568\|Ga0066703_10075789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1937	Open in IMG/M
3300005574\|Ga0066694_10201044	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300005576\|Ga0066708_10332530	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005586\|Ga0066691_10048387	All Organisms → cellular organisms → Bacteria → Proteobacteria	2270	Open in IMG/M
3300005843\|Ga0068860_100240245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1762	Open in IMG/M
3300006031\|Ga0066651_10031649	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300006031\|Ga0066651_10633879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300006034\|Ga0066656_10387965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300006058\|Ga0075432_10350657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	625	Open in IMG/M
3300006796\|Ga0066665_10629261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300006800\|Ga0066660_10079745	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300006852\|Ga0075433_10046664	All Organisms → cellular organisms → Bacteria	3768	Open in IMG/M
3300006852\|Ga0075433_10396699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1217	Open in IMG/M
3300006852\|Ga0075433_11623204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300006854\|Ga0075425_100016443	All Organisms → cellular organisms → Bacteria	8018	Open in IMG/M
3300006854\|Ga0075425_100037906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5370	Open in IMG/M
3300006854\|Ga0075425_100341386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1724	Open in IMG/M
3300006871\|Ga0075434_100112704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2731	Open in IMG/M
3300006871\|Ga0075434_101651447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300006871\|Ga0075434_101807396	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006903\|Ga0075426_10015077	All Organisms → cellular organisms → Bacteria → Acidobacteria	5517	Open in IMG/M
3300006903\|Ga0075426_10497574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300006903\|Ga0075426_10760684	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300006914\|Ga0075436_100392454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300006914\|Ga0075436_101508796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus peraridilitoris	510	Open in IMG/M
3300007076\|Ga0075435_100080457	All Organisms → cellular organisms → Bacteria → Acidobacteria	2675	Open in IMG/M
3300009012\|Ga0066710_100016726	All Organisms → cellular organisms → Bacteria → Acidobacteria	7875	Open in IMG/M
3300009012\|Ga0066710_100255777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2537	Open in IMG/M
3300009088\|Ga0099830_10765885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300009137\|Ga0066709_100342196	All Organisms → cellular organisms → Bacteria → Acidobacteria	2051	Open in IMG/M
3300009147\|Ga0114129_10080526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4526	Open in IMG/M
3300009162\|Ga0075423_10092487	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300009162\|Ga0075423_10161635	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300009162\|Ga0075423_12923321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300010304\|Ga0134088_10198880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300010322\|Ga0134084_10022183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1716	Open in IMG/M
3300010323\|Ga0134086_10165239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300010323\|Ga0134086_10241237	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300010329\|Ga0134111_10050288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1512	Open in IMG/M
3300010333\|Ga0134080_10136671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300010333\|Ga0134080_10256556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300010336\|Ga0134071_10034748	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300010337\|Ga0134062_10027767	All Organisms → cellular organisms → Bacteria → Acidobacteria	2210	Open in IMG/M
3300012201\|Ga0137365_10117836	All Organisms → cellular organisms → Bacteria → Acidobacteria	1997	Open in IMG/M
3300012201\|Ga0137365_10159021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1695	Open in IMG/M
3300012203\|Ga0137399_10000310	All Organisms → cellular organisms → Bacteria	18686	Open in IMG/M
3300012206\|Ga0137380_10014360	All Organisms → cellular organisms → Bacteria → Acidobacteria	7220	Open in IMG/M
3300012207\|Ga0137381_10113418	All Organisms → cellular organisms → Bacteria → Acidobacteria	2309	Open in IMG/M
3300012211\|Ga0137377_10022785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5566	Open in IMG/M
3300012285\|Ga0137370_10577435	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300012349\|Ga0137387_10150370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1657	Open in IMG/M
3300012918\|Ga0137396_10007059	All Organisms → cellular organisms → Bacteria	6681	Open in IMG/M
3300012922\|Ga0137394_10739960	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300012976\|Ga0134076_10047429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1613	Open in IMG/M
3300012976\|Ga0134076_10605778	Not Available	512	Open in IMG/M
3300014154\|Ga0134075_10136320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300015358\|Ga0134089_10208879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300017656\|Ga0134112_10054617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1453	Open in IMG/M
3300018076\|Ga0184609_10031581	Not Available	2180	Open in IMG/M
3300018431\|Ga0066655_10591947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300018433\|Ga0066667_10010394	All Organisms → cellular organisms → Bacteria → Acidobacteria	4448	Open in IMG/M
3300018433\|Ga0066667_10129984	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300018433\|Ga0066667_11636164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300018468\|Ga0066662_10023504	All Organisms → cellular organisms → Bacteria → Acidobacteria	3512	Open in IMG/M
3300018482\|Ga0066669_10264553	All Organisms → cellular organisms → Bacteria → Acidobacteria	1370	Open in IMG/M
3300021080\|Ga0210382_10005487	All Organisms → cellular organisms → Bacteria → Acidobacteria	4135	Open in IMG/M
3300021170\|Ga0210400_10306906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1303	Open in IMG/M
3300021344\|Ga0193719_10055700	All Organisms → cellular organisms → Bacteria → Acidobacteria	1714	Open in IMG/M
3300021344\|Ga0193719_10062904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1611	Open in IMG/M
3300022694\|Ga0222623_10218119	Not Available	739	Open in IMG/M
3300025922\|Ga0207646_10802543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300026296\|Ga0209235_1084333	All Organisms → cellular organisms → Bacteria → Acidobacteria	1409	Open in IMG/M
3300026309\|Ga0209055_1174651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300026313\|Ga0209761_1194783	All Organisms → cellular organisms → Bacteria → Acidobacteria	899	Open in IMG/M
3300026317\|Ga0209154_1043900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2011	Open in IMG/M
3300026318\|Ga0209471_1288259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300026323\|Ga0209472_1070909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1438	Open in IMG/M
3300026324\|Ga0209470_1158547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300026327\|Ga0209266_1016258	All Organisms → cellular organisms → Bacteria → Acidobacteria	4194	Open in IMG/M
3300026342\|Ga0209057_1018807	All Organisms → cellular organisms → Bacteria	3950	Open in IMG/M
3300026523\|Ga0209808_1099200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1232	Open in IMG/M
3300026529\|Ga0209806_1303436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300026536\|Ga0209058_1029554	All Organisms → cellular organisms → Bacteria	3405	Open in IMG/M
3300026536\|Ga0209058_1262799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300026538\|Ga0209056_10014975	All Organisms → cellular organisms → Bacteria → Acidobacteria	7724	Open in IMG/M
3300026540\|Ga0209376_1189743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300026542\|Ga0209805_1061108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1854	Open in IMG/M
3300026542\|Ga0209805_1126673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300026552\|Ga0209577_10008327	All Organisms → cellular organisms → Bacteria	9510	Open in IMG/M
3300027655\|Ga0209388_1145730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300027815\|Ga0209726_10129410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1453	Open in IMG/M
3300028381\|Ga0268264_10683626	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300030990\|Ga0308178_1014768	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300030990\|Ga0308178_1038879	Not Available	846	Open in IMG/M
3300031081\|Ga0308185_1008854	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300031095\|Ga0308184_1022849	Not Available	684	Open in IMG/M
3300031125\|Ga0308182_1002145	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300031424\|Ga0308179_1013089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300031720\|Ga0307469_10472321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300031820\|Ga0307473_10003664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4677	Open in IMG/M
3300034177\|Ga0364932_0316640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300034681\|Ga0370546_024938	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300034681\|Ga0370546_041004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.94%
Host-Associated	Host-Associated	16.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.02%
Plants	Host-Associated → Plants	16.06%
Aquatic	Environmental → Aquatic	2.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.60%
Freshwater	Environmental → Aquatic → Freshwater	1.46%
Sediment	Environmental → Aquatic → Sediment	1.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.46%
Floodplain	Environmental → Terrestrial → Floodplain	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.60%
Loam	Environmental → Terrestrial → Soil → Loam	4.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.73%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.73%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	46.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.73%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.73%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	37.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.46%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.73%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031095	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_158 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_100117315	3300002908	Grasslands Soil	MSMSFSRTAIIPVWLFVFGLFVLLGSSMTFATVAVLLMGGTALIAMLALSKGHRPTIAAMTVPGPPLATLPSANIGPGSWPNSGFRNSRQRATQR*
Ga0066672_100105344	3300005167	Soil	MLFNRTAIIPVWFVVFGLFALFELPMAFAMSVVLLLVAGVALTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER*
Ga0066683_100400161	3300005172	Soil	MSMLSSRTAMIPVWLLVFGLFVSIGSPLTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0066683_102057883	3300005172	Soil	MLFNRTAIVPMWLVVFGLFVMFESPMTFATGVVLFLVAGVALTIMLVASKELHTLVPMTPPVPLAMVPSAQFVPNSWPNSGFRNSRQRGTKGR*
Ga0066683_103403322	3300005172	Soil	MSMLFNRAAIVPMWLVVFGLFVLFESPLTFAAGLVLFLVAGVALTTMLAVWKQLHTIAPRTAPNPPLAMLPSAAFVSNSWPNSGFRNSRRRGTRGG*
Ga0066680_100159642	3300005174	Soil	MLFSRTAMIPAWLFVFGLFVIIGSPMTFATGLVLLLMGGVALTIMPVLRKEPLPTIAAMTIPDPPLATLSSADFAPNSWPNSGFRNSRQRGTGGGHRSERT*
Ga0066680_104738392	3300005174	Soil	MSMSCSRTAIIPVWLVVFGLFPLLGSPMTVITGVVVLLGAVALTMMLVPWKGPSYSRGDTAPIPSLVTLPSADFVPNSWPDSGFRNSRQ
Ga0066679_100930743	3300005176	Soil	MLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGMALTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER*
Ga0066690_100917884	3300005177	Soil	MLFSRTAMIPVWLFVFGLFVIIGSPMTFATGLVLLLMGGVALTIMLVLWKEPLPTIAAMTIPDPPLATLSSADFAPNSWPNSGFRNSRQRGTGGGHRSERT*
Ga0066690_104501831	3300005177	Soil	MLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGVALTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER*
Ga0066688_103204932	3300005178	Soil	MSMLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGVALTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER*
Ga0066684_100602465	3300005179	Soil	MLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGVPLTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER*
Ga0066684_106658972	3300005179	Soil	MTTMSMLFSRTAMIPVWLFVFGLFVIIGSPMAFATGLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPNSGFRNSRQRGPRDGYRSERT*
Ga0066685_100364714	3300005180	Soil	MSMLSSRTAMIPVWLLVFGLFVSIGPPMTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0066685_103070822	3300005180	Soil	MSILFSRTAIIPAWLVVFGLFALFKSPTTFATGVILLLVGSVALMILVRWRGLPPTIALTMASDPPPATLPSADVLANSWPNSGFRNSRRRGTMGG*
Ga0066676_102277362	3300005186	Soil	MSMLFNRTAIVPMWLVVFGLFVMFESPMTFATGVVLFLVAGVALTIMLVASKELHTLVPMTPPVPLAMVPSAQFVPNSWPNSGFRNSRQRGTKGR*
Ga0066675_101724691	3300005187	Soil	LFVIIGSPTAFAAGLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPNSGFRNSRQRGTGGGYRSERS*
Ga0070708_1006155261	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RTAIIPVWLLVFGLFMLLGSPMTFAIGLVLLLMAGAALTLMLLPWKEPLPTVAAMTMPDPPLATLSSADFVPNSWPNSGFRNGRQRGSKGR*
Ga0066689_100307012	3300005447	Soil	MLFSRTAMIPPWLFVFGLFVIIGSPMTFATGLVLLLMGGVALTIMLVPWKEPLPTIAAMTIPDPPLATLSSADFAPNSWPNSGFRNSRQRGTGGGHRSERT*
Ga0066682_100780802	3300005450	Soil	MSMLSSRTAMIPVWLLVFGLFVSIGPPMTFATGLVLLLMGGVALIIMLVLSKEPLPAIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0066681_100658563	3300005451	Soil	MSMLFSRTAMIPVWLFVFGLFVIIGSPMAFATGLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPNSGFRNSRQRGTGGGYRSERS*
Ga0070699_1000106462	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MVFSRTTTIPVSLVAFGLFALFGLPMTPAVGVVLLLVGGVALTIMLVLWKELPPTIVAMTAPDPPLATLPSADFVPNSWPNSGFRNSRQRGTRGERRDSGKR*
Ga0070699_1003797752	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTNMSLLFSRTAIIPVWLLVFGLFMLLGSPMTFAIGLVLLLMAGAALTLMLLPWKEPLPTVAAMTMPDPPLATLSSADFVPNSWPNSGFRNGRQRGSKGR*
Ga0070697_1000410618	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSMLFSRTAIIPVWFVVFGLVAVLGSSMTFASGVVLLLVGGVALTVMLVLWEKLLPTIAASTTPNRSLAVPSADVAPNSWPNSGFR
Ga0070697_1013162131	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LVFGLFMLLGSPMTFAIGLVLLLVAGAALTLMLLPWKEPLPTVAAMTMPDPPLATLSSADFVPNSWPNSGFRNGRQRGSKGR*
Ga0070732_101876611	3300005542	Surface Soil	MPIMSMLFSRRAIVPAWPLVFGLFVLLGSPMTFATRVVLLLAAGVALTIMLALWKEPAPTVVAIATPDSPRAPLSSADFVPNSWPNSGFRNSRQRGTKGG*
Ga0066701_106076942	3300005552	Soil	IPVWLLVFGLFVSIGSPMTFATGLVLLLMGGVALIIMLVLSKEPLPAIGAMTMPDPPLPTLSSADFVPNSWPNSGFRNSRQRGTGGGHRSERT*
Ga0066707_105353101	3300005556	Soil	QRASAPRRPHTARKKVTTMSMLFSRTAIILVWLVVFGLFALFGPPMTFATGVVLLPVAGVALTIMLVLWKEFSRTVEAMTAPDLPLATLPSADFVPNSWPNSGFRNSAQRGPRERRDSGKW*
Ga0066704_100362616	3300005557	Soil	MSMLFSRAAMIPPWLFVFGLFVIIGSPMTFATGLVLLLMGGVALTIMLVLWKEPLPTIAAMTIPDPPLATLSSADFAPNSWPNSGFRNSRQRGTGGGHRSERT*
Ga0066698_100349731	3300005558	Soil	TFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0066698_101862623	3300005558	Soil	MSMLFSRTAIILVWLVVFGLFALFGSPMTFATGVVLLLVAGVALTMLVLWKEFSPTVAAMTAPDLPLATLPSAHFVPNSWPNSGFRNSGQRGTRGERRDSRTR*
Ga0066700_111172231	3300005559	Soil	MSMLFNRTAIIPVWFVVFGLFALFELPMAFAMSVVLLLVAGVALTIMLVLWKEFPPTISAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER*
Ga0066699_100082104	3300005561	Soil	MSMLFNRTAIIPVWFVVFGLFALFELPMAFAMSVVLLLVAGVALTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER*
Ga0066699_105561922	3300005561	Soil	MSMLFSRTAMIPVWLFVFGLFVIIGSPTAFAAGLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPNSGFRNSRQKGTGGGYRSERS*
Ga0066703_100757895	3300005568	Soil	MSMLFSRTAMIPPWLFVFGLFVIIGSPMTFATGLVLLLMGGVALTIMLVLWKEPLPTIAAMTIPDPPLATLSSADFAPNSWPNSGFRNSRQRGTGGGHRSERT*
Ga0066694_102010441	3300005574	Soil	MSMLFNRTAIVPMWLVVFGLFVMFESPMTFATGVVLFLVAGVALTIMLVASKELHTLVPMTPPVPLAMVPSAQFVPNSWPNSGFRNSR
Ga0066708_103325301	3300005576	Soil	MSMLFSRTAMIPVWLFVFGLFVIIGSPMAFATGLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPNSGFRNSRQRGTGG
Ga0066691_100483873	3300005586	Soil	MLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGMALTIMLVLWKEFPPTIAAMTAPDLPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER*
Ga0068860_1002402454	3300005843	Switchgrass Rhizosphere	MLMLFSRTAVIPVWLLVLGLFVSFVSPMTFTLGLVMILVGGGALTILRVLGQEPAPTIAVMTVPAPLLATHSSTDFVSNSWPNSGYRSIRNRSMRRR*
Ga0066651_100316493	3300006031	Soil	MSMLFKRAAIVPLWLVVFGLFVMFESPTTFATGVVLFLVAGVALTIMLVASRELHTLVPMTAPDPPLAMVPSAEFVPNSWPDSGFRNSTQRGTKGR*
Ga0066651_106338791	3300006031	Soil	MSMLFSRTAMIPVWLFVFGLFVIIGSPMAFATGLVLLLVGGMALTSMLVLWKEPLHTIAAMTMPVPPIATLSSADFVPNSWPNSGFRNS
Ga0066656_103879652	3300006034	Soil	MSMLFSRTAIILVWLVVFGLFALFGSPMTFATGVVLLLVAGVALTIMLVLWKELPPAVAAMTAPDLPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSRTR*
Ga0075432_103506571	3300006058	Populus Rhizosphere	MSMLFSRTAIIPVWLLVFGQLVLFGSRMTFPRGLVLLLAAGVALAIMRVLWREPAQTIAAMTVPAPPPATLSPTGFVSNSWPNSGFRNIRIRSRSTRGR*
Ga0066665_106292611	3300006796	Soil	RTAMIPVWLLVFGLFVSIGPPMTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0066660_100797453	3300006800	Soil	IPVWFVVFGLFALFELPMAFAMSVVLLLVAGVALTIMLVLWKEIPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER*
Ga0075433_100466646	3300006852	Populus Rhizosphere	MSMLFSRTAIIPVWFVVFGLVAVLGSSMTFASGVVLLLVGGVALTVMLVLWEKLLPTIAALTAPNRSLAAPSADVVPNSWPNSGFRNSRQRSTKSR*
Ga0075433_103966993	3300006852	Populus Rhizosphere	MSMLFSRTAIIPVWLLVFGQLVLFGSRMTFPRGLVLLLAAGVALAIMRVLWREPAQTIAAMTVPAPPPATLSPTDFVSNSWPNSGFRNIRKRSTRG
Ga0075433_116232042	3300006852	Populus Rhizosphere	MSMLFSRTAIIPVWLLVFGQLVLFGSRMTFSRGLVLLLAAGVALTIMRVLWREPAQTIAAMTVPAPPPATLSPTDFVSNSWPNSGFRNIRKRSTRGR*
Ga0075425_1000164433	3300006854	Populus Rhizosphere	MSMLFSRTAIIPVWLLVFGQLVLFGSRMTFPRGLVLLLAAGVALAIMRVLWREPAQTIAAMTVPAPPPATLSPTDFVSNSWPNSGFRNIRKRSTRGR*
Ga0075425_1000379065	3300006854	Populus Rhizosphere	MSILFSRTAMIPVWLLVFGLLVFMGSPMTFGNGALLLMGGVALTIMLVLWKNPLPTIAARPMPDPPLATLSSADFVPNSWPNSGFRNSRRRGTRGGSAR*
Ga0075425_1003413863	3300006854	Populus Rhizosphere	MSMLFSRTAIIPVWLLVFGLLVSFESPMTFRPGLVMVLVGGVALTMMRVLWQEPAPTIAPMTVPGPLLATHSSTDFVSNWWPNSGFRNISNRSTRGR*
Ga0075434_1001127041	3300006871	Populus Rhizosphere	MSMLFRRTAIIPVWFVVFGLAVLGSSMTFASGVVLLLVGGVALTVMLVLWEKLLPTIAALTAPNRSLAAPSADVVPNSWPNSGFRNSRQRGTKSR*
Ga0075434_1016514472	3300006871	Populus Rhizosphere	MSMVFSRTTTIPVSLVAFGLFALFGLPMTPAVGVVLLLVGGVALTIMLILWKELPPTIVTMTAPDPPLATLPSADFVPNSWPNSGF
Ga0075434_1018073961	3300006871	Populus Rhizosphere	VWLLVFGLLVFMGSPMTFGNGALLLMGGVALTIMLVLWKNPLPTIAARPMPDPPLATLSSADFVPNSWPNSGFRNSRRRGTRGGSAR*
Ga0075426_100150779	3300006903	Populus Rhizosphere	MSMVFSRTTTIPVSLVAFGLFALFGLPMTPAVGVVLLLVGGVALTIMLVLRKELPPTIVAMTVPDPPLATLPSADFVPNSWPNSGFRNSRQRGTRGERRDSGKR*
Ga0075426_104975742	3300006903	Populus Rhizosphere	MSMLFRRTAIIPVWFVVFGLAVLGSSMTFASGVVLLLVGGVALTVMLVLWEKLLPTIAALTAPNRSLAVPSADVVPNSWPNSGFRNSRQRGTKSR*
Ga0075426_107606841	3300006903	Populus Rhizosphere	RTAIIPVWLLVFGLLVSFVSPMTFRPGLVMVLVGGVALTMMRVLWQEPAPTIAPMTVPGPLLATRSSTDFVSNWWPNSGFRNISNRSTRGR*
Ga0075436_1003924542	3300006914	Populus Rhizosphere	MSMLFSRTAIIPVWLLVFGQLVLFGSRMTFPRGLVLLLAAGVALTIMRVLWREPAQTIAAMTVPAPPPATLSPTDFVSNSWPNSGFRNIRKRSTRGQ*
Ga0075436_1015087961	3300006914	Populus Rhizosphere	VIRTTRKKRDPMSMVFSRTTTIPVSLVAFGLFALFGLPMTPAVGVVLLLVGGVALTIMLVLRKELPPTIVAMTVPDPPLATLPSADFVPNSWPNSGFRNSRQRGTRGERRDSGKR*
Ga0075435_1000804572	3300007076	Populus Rhizosphere	MSMLFRRTAIIPVWFVVFGLAVLGSSMTFASGVVLLLVGGVALTVMLVLWEKLLPTIALTAPNRSLAAPSADVVPNSWPNSGFRNSRQRGTKSR*
Ga0066710_1000167262	3300009012	Grasslands Soil	MSMLFNRAAIVPMWLVVFGLFVLFESPLTFAAGLVLFLVAGVALTTMLAVWKQLHTIAPRTARNPPLAMLPSTAFVSNSWPNSGFRNSRRRGTRGG
Ga0066710_1002557772	3300009012	Grasslands Soil	MSMLFSRTAMIPPWLFVFGLFVIIGSPMTFATGLVLLLMGGVALTIMLVLWKEPLPTIAAMTIPDPPLATLSSADFAPNSWPNSGFRNSRQRGTGGGHRSERT
Ga0099830_107658852	3300009088	Vadose Zone Soil	MAMSFSRTAIIPVWLVVFGLFAMVGSPMTLATGVVVLVGGVALTIMLVLWKGPSHHRGDDAPDPPVVTLPSADFVPNVWPDSGFRNSRQRGTRGR*
Ga0066709_1003421964	3300009137	Grasslands Soil	MSMSCSRTAIIPVWLVVFGLFPLLGSPMTVITGVVVLLGAVALTMMLVPWKGPSYSRGDTAPIPSLVTLPSADFVPNSWPDSGFRNSRQRGR*
Ga0114129_100805266	3300009147	Populus Rhizosphere	MSMLFSRTAIIPVWFVVFGLVAVLGSSMTFASGVVLLLVGGVALTVMLVLWEKLLPTIAASTTPNRSLPVPSADVVPNSWPNSGFRNIRQRGTKSR*
Ga0075423_100924875	3300009162	Populus Rhizosphere	MSMLFSRTAIIPVWFVVFGLVAVLGSSMTFASGVVLLLVGGVALTVMLVLWEKLLPAIAASTPNRSLAVPSADVVPNSWPNSGFRNSRQRGTKSR*
Ga0075423_101616354	3300009162	Populus Rhizosphere	MSMIFGRTAIIPVWLVVFGLFAVSGSPISSATGVVLLLVGGIALTIVLALWNEPRPTIATMPAPDPLAKLPSADFVPNSWPNSGYRNSRQRGTRAR*
Ga0075423_129233211	3300009162	Populus Rhizosphere	MSMVFSRTTTIPVSLVAFGLFALFGLPMTPAVGVVLLLVGGVALTIMLVLRKELPPTIVAMTVPDPPLATLPSADFVPNAWPNSGFRNSRQRGIGA*
Ga0134088_101988802	3300010304	Grasslands Soil	MSILFSRTAIIPVWLVVFGLFALFESPTMYATGVILLVGVALTIMLVRWRELPPTVASMMAPDPPLATLPSADVVPNSWPNSGFRNGRQRGTMGG*
Ga0134084_100221833	3300010322	Grasslands Soil	MSMLFSRTAMIPVWLLVFGLFVSIGPPMTFATGLVLLLMGGVALIIMLVLSKEPLPAIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0134086_101652392	3300010323	Grasslands Soil	MSMLFNRTAIVPMWLVVFGLFVMFESPMTFATGVVLFLVAGVALTIMLVASKELHTLVPMTPPVPLAMVPSAQFVPNAWPNSGFRNSRQRGTKGR*
Ga0134086_102412372	3300010323	Grasslands Soil	MSMLFNRAAIVPMWLVVFGLFVLFESPLTFAAGLVLFLVAGVALTTMLAVWKQLHTIGPRTARNPPLAMLPSTAFVSNSWPKSGFRN
Ga0134111_100502883	3300010329	Grasslands Soil	MSMLSSRTAMIPVWLLVFGLFVSIGSPLTFATGLVLLLMGGVALIIMLVLSKERLPAIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0134080_101366712	3300010333	Grasslands Soil	MSMLFNRAAIVPMWLVVFGLFVLFESPLTFAAGLVLFLVAGVALTTMLAVWKQLHTIAPRTAPNPPLAMLPSAAFVSNSWPNSGFRNSRRRGTWGG*
Ga0134080_102565561	3300010333	Grasslands Soil	MLSSRTAMIPVWLLVFGLFVSIGPPMTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0134071_100347484	3300010336	Grasslands Soil	MSMLSSRTAMIPVWLLVFGLFVSIGSPMTFATGLVLLLMGGVALRIMLVLSKKPLPAIGAMTMPDPPLATLSSADFVPNSWPNSGFRNSRQRGTRRG*
Ga0134062_100277673	3300010337	Grasslands Soil	MLSSRTAMIPVWLLVFGLFVSIGPPMTFATGLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0137365_101178364	3300012201	Vadose Zone Soil	MMSMLFNRTAIVRMWLVVFGLFVMFESPMTFATGVVLFLVAGVALTIMLVASKELHTLVPMTPPVPLAMVPSAQFVPNSWPNSGFRNSRQRGTKGR*
Ga0137365_101590212	3300012201	Vadose Zone Soil	MSMFFNRAAIVPMWLVVFGLFVLFESPLTFAAGLVLFLVAGVALTTMLVVWKQLHTIAPRTAPNPPLAMLPLAPFVPNSWPNSGFRNSRRRDRFS*
Ga0137399_100003105	3300012203	Vadose Zone Soil	MSMSFSRTAIIPVWLLVFGLFVLFGSSMTFATVAILLGGGAALITMLALSKEHAPTIAAMTMPGPPLATLPSADIERHSWPNSAFRNSRQRATQR*
Ga0137380_100143605	3300012206	Vadose Zone Soil	MSMLSSRTAMIPVWLLVFGLFVSIGSPMTFATGLALLLMGGVALIIMLVLSKEPLPAIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0137381_101134181	3300012207	Vadose Zone Soil	MATMSMLSSRTAMIPVWLLVFGLFVSIGSPMTFSTGLVLLLMWGVALIIMLVLSKEPLPAIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0137377_1002278510	3300012211	Vadose Zone Soil	MSMLFNRTAIVPMWLVVFGLFVMFESPMTFATGVVLFLVAGVALTIMLVASKELHTLVPMTPPVPLAMVPSAQFVPNSWPNSGFRNSRQRGTKMARV*
Ga0137370_105774352	3300012285	Vadose Zone Soil	MSMLFNRTAIVPMWLVVFGLFVMFESPITFATGVALFLVACVALTIMLVASKGLHTLVPMTPPVPLAMVPSAQFVPNSWPNSGFRNSRQRGTKGR*
Ga0137387_101503702	3300012349	Vadose Zone Soil	MSMLSSRTAMIPVWLLVFGLFVSFGPPMTFATGLVLLLMGGVALIIMLVLSKEPLPAIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0137396_100070596	3300012918	Vadose Zone Soil	MSMSFSRTAIIPVWLLVFGLFVLFGSSMTFATVAILLGGGAALITMLALSKEHAPTIAAMTMPGPPLATLPSADIERHSWPNSAFRNSRQRASQR*
Ga0137394_107399602	3300012922	Vadose Zone Soil	MAMSFNRTAIIPVWLVVFGLFALFGSPTTFITGVVVLVGGVTLTIMLVLWKGPSHDRADDAPGPPLVTLLSAEFVPNLWPDSGFRNSRQRGTRGR*
Ga0134076_100474293	3300012976	Grasslands Soil	MSMLSSRTAMIPVWLLVFGLFVSIGSPMTFATGLVLLLMGGVALIIKLVLSKEPLPAIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0134076_106057782	3300012976	Grasslands Soil	MSMLFNRAAIVPMWLAAFGLFVLFESPMTFATGVALFLVAGVSLTIMLAVWKKLHPALAAMTVPGAPLATLPPGDVVPNSWPNSGYRNSRRRGTSGA*
Ga0134075_101363202	3300014154	Grasslands Soil	MSMLSSRTAMIPVWLLVFGLFVSIGSPMTFATGLVLLLMGGVALIIMLVLSKEPLPAIGAMTMPDPPLPTSSSADFVPNSWPGSAFRNSRQKRTGGG*
Ga0134089_102088791	3300015358	Grasslands Soil	MATMSMLSSRTAMIPVWLVVFGLFVSIGSPMTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG*
Ga0134112_100546172	3300017656	Grasslands Soil	MLSSRTAMIPVWLLVFGLFVSIGSPLTFATGLVLLLMGGVALIIMLVLSKEPLPAIGSMTMPDPPLPKLSSADFVPNSWPDSGFRNSRQKRTGGG
Ga0184609_100315812	3300018076	Groundwater Sediment	MSMLFNRAAIVPMWLLVFGLFVVFQSPMTFATGVVVFLVAGVALTIMLVAWKGHRTLAPMTAPPPLAMVPSADFVSNTWPNSGYRNSSRRGARGE
Ga0066655_105919472	3300018431	Grasslands Soil	KLPTMSRLLKRTAIVPMWLVVFGLFVMFESPMTFATGVVLFLVAGVALTIMLVASKELHTLVPMTPPVPLAMVPSAQFVPNSWPNSGFRNSRQRGTKGR
Ga0066667_100103942	3300018433	Grasslands Soil	MSMLSSRTAMIPVWLLVFGLFVSIGPPMTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG
Ga0066667_101299843	3300018433	Grasslands Soil	MLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGVPLTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER
Ga0066667_116361641	3300018433	Grasslands Soil	MSMLFSRTAMIPPWLFVFGLFVIIGSPMTFATGLVLLLMGGVALTIMLVLWKEPLPTIAAMTIPDPPLATLSSADFAPNSWPNSGFRNSRQRGTGGGYRSERS
Ga0066662_100235044	3300018468	Grasslands Soil	MLFNRTAIIPVWFVVFGLFALFELPMAFAMSVVLLLVAGVALTIMLVLWKEIPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER
Ga0066669_102645533	3300018482	Grasslands Soil	MSMLFKRAAIVPLWLVVFGLFVMFESPTTFATGVVLFLVAGVALTIMLVASRELHTLVPMTAPDPPLAMVPSAEFVPNSWPDSGLRKTTPRG
Ga0210382_100054873	3300021080	Groundwater Sediment	MSMSFNRTAIIPVWLVVFGLFALFGSPMTFATGVVVLVVGVALTIMLVLWKGPSRDRGDDAPDPPRVTLLSGDFVPNLWPDSGFRNSRQRGARGRIPQ
Ga0210400_103069063	3300021170	Soil	MPTLSMLVRSRAVVPVWPLVFGLFVLLGSPMTFAARVVLLFAVGLALTIMLALWKKPAPTVVAMTTPDLQRAPLSSADFVPNSWPNSGFRNSRQRGTTRG
Ga0193719_100557002	3300021344	Soil	MAMSFSRPAIISVWLVVFGLFALFRSPMTFVTGVVVLVGGVTLTIMLVLWKGPAHDRGDDARDPPRLTLLSADFVPNLWPDSGFRNSRQRGTRGR
Ga0193719_100629042	3300021344	Soil	MAAKLLAVRKSQERSVTIMAMSFSRTAIIPVWLVVFGLFALFGSPMTFATGVVVLLGGAALAIVLWKGPSHDRGDDAPDPPLVMLPSADFVPNLWPDSGFRNSRQRGTRGR
Ga0222623_102181192	3300022694	Groundwater Sediment	MWLLVFGLFVVFQSPMTFATGVVVFLVAGVALTIMLVAWKGHRTLAPMTAPPPLAMVPSADFVSNTWPNSGYRNSSRRGARGE
Ga0207646_108025431	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTNMSLLFSRTAIIPVWLLVFGLFMLLGSPMTFAIGLVLLLVAGAALTLMLLPWKEPLPTVAAMTMPDPPLATLSSADFVPNSWPNSGFRNGRQRGSKGR
Ga0209235_10843333	3300026296	Grasslands Soil	MSMSFSRTAIIPVWLFVFGLFVLLGSSMTFATVAVLLMGGTALIAMLALSKGHRPTIAAMTVPGPPLATLPSANIGPGSWPNSGFRNSRQRAMQR
Ga0209055_11746512	3300026309	Soil	MSMLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGVPLTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER
Ga0209761_11947831	3300026313	Grasslands Soil	MSMSFSRTAIIPVWLLVFGLFVLLGSSMTFATVAVLLMGGTALIAMLALSKGHRPTIAAMTVPGPPLATLPSANIGPGSWPNSGFRNSRQRATQR
Ga0209154_10439003	3300026317	Soil	MLFNRTAIIPVWFVVFGLFALFELPMAFAMSVVLLLVAGVALTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER
Ga0209471_12882591	3300026318	Soil	MSMLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGMALTIMLVLWKEFPPTIAAMTAPDLPLATLPSADFVPNSWPNSGFRN
Ga0209472_10709092	3300026323	Soil	MSMLFSRTAMIPVWLFVFGLFVIIGSPMAFATGLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPNSGFRNSRQRGTGGGYRSERS
Ga0209470_11585471	3300026324	Soil	MSMLFNRTAIVPMWLVVFGLFVMFESPMTFATGVVLFLVAGVALTIMLVASKELHTLVPMTPPVPLAMVPSAQFVPNSWPNSGFRNSRQRGTKGR
Ga0209266_10162584	3300026327	Soil	MSMLSSRTAMIPVWLLVFGLFVSIGSPLTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG
Ga0209057_10188072	3300026342	Soil	MLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGVALTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER
Ga0209808_10992002	3300026523	Soil	MSMLFSRTAMIPVWLFVFGLFVIIGSPMAFATVLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPNSGFRNSRQRGTHLKHPSTSVNR
Ga0209806_13034361	3300026529	Soil	MSMLFNRTAIIPVWFVVFGLFALFESPMAFAMSVVLLLVAGVALTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER
Ga0209058_10295546	3300026536	Soil	LLVFGLFVSIGSPMTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG
Ga0209058_12627991	3300026536	Soil	MSMLSSRTAMIPVWLLVFGLFVSIGSPMTFATGLVLLLMGGVALIIMLVLSKEPLPAIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG
Ga0209056_100149757	3300026538	Soil	MSMLSSRAAMIPVWLLVFGLFVSIGPPMTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDSGFRNSRQKRTGGG
Ga0209376_11897431	3300026540	Soil	MSMLSSRTAMIPVWLLVFGLFVSIGPPMTFATGLVLLLMGGVALIIMLVLSKEPLPPIGAMTMPDPPLPTLSSADFVPNSWPDS
Ga0209805_10611082	3300026542	Soil	MSMLFNRTAIIPVWFVVFGLFALFELPMAFAMSVVLLLVAGVALTIMLVLWKEFPPTIAAMTAPDPPLATLPSADFVPNSWPNSGFRNSGQRGTRGERRDSGER
Ga0209805_11266732	3300026542	Soil	MSMLFSRTAMIPVWLFVFGLFVIIGSPTAFAAGLVLLLVGGMALTSMLVLWKEPLPTIAAMTMPVPPLATLSSADFVPNSWPNSGFRNSRQKGTGGGYRSERS
Ga0209577_100083277	3300026552	Soil	MTTMSMLFSRTAMIPPWLFVFGLFVIIGSPMTFATGLVLLLMGGVALTIMLVLWKEPLPTIAAMTIPDPPLATLSSADFAPNSWPNSGFRNSRQRGTGGGHRSERT
Ga0209388_11457302	3300027655	Vadose Zone Soil	MSMSFSRTAIIPVWLFVFGLFVLLGSSMTFATVAVLLMGGTALIAMLALSKGHRPTIAAMTVPGPPLATLPSANIGPGSWPNSGFRNSRQRATQR
Ga0209726_101294102	3300027815	Groundwater	MSMLFSRTAIILVWLVVFGLFALFRLPMTFATGVVLLPVAGVALTIMLVLWKEFSSTGAAMTTLDLPLLTLPSADFVPNSWPNSGFRNSGQRGTRDERRDSGKR
Ga0268264_106836262	3300028381	Switchgrass Rhizosphere	MLMLFSRTAVIPVWLLVLGLFVSFVSPMTFTLGLVMILVGGGALTILRVLGQEPAPTIAVMTVPAPLLATHSSTDFVSNSWPNSGYRSIRNRSMRRR
Ga0308178_10147682	3300030990	Soil	MSMLFNRAAIVPMWLLVFGLFVVFQSPMTVATGVVVFLVAGVALTIMLVAWKERMVPSAHFVPNSWPDSGYRNSRRRGARGQ
Ga0308178_10388791	3300030990	Soil	MSMLFNRAAIVPMWLLVFGLFVVFQSPMTFATGVVVFLVAGVALTIMLVAWKERRTLTPMTAPPPLAMGPSADFVSNSWPNSGYRNSRRRGARGE
Ga0308185_10088542	3300031081	Soil	MSMLFNRTAIVPMWLLVFGLFVVFQSPMTFATGVVVFLVAGVALTIMLVAWKEPRTLAPMTAPPPLAMGPSADFVPNSWPNSGYRNSRRRGARGQFV
Ga0308184_10228492	3300031095	Soil	MSMLFNRAAIVPMWLLVFGLFVVFQSPMTVATGVVVFLVAGVALSIMLVASKERMVPSAHFVPNSW
Ga0308182_10021452	3300031125	Soil	MSMLFNRTAIVPMWLLVFGLFVVFQSPMTVATSVVVFLVAGVALSIMLVASKERMVPSAHFVPNSWPDSGYRNSRRRGARGQ
Ga0308179_10130891	3300031424	Soil	TRKKLMTMSMLFNRAAIVPMWLLVFGLFVVFQSPMTFATGVVVFLVAGVALTIMLVAWKERRTLAPMTAPPPLAMGPSADFVSNSWPNSGYRNSRRRGARGE
Ga0307469_104723211	3300031720	Hardwood Forest Soil	MTNMSLLFSRTAIIPVWLLVFGLFMLLGSPMTFAIGLVLLLMAGAALTLMLLPWKEPLPTVAAMTMPDPPLATLSSADFVPNSWPNSGFRNGRQR
Ga0307473_100036642	3300031820	Hardwood Forest Soil	MTNMSLLFSRTAIIPVWLLVFGLFMLLGSPMTFAIGLVLLLIAGAALTLMLLPWKEPLPTVAAMTMPDPPLATLSSADFVPNSWPNSGFRNGRQRGSKGR
Ga0364932_0316640_293_583	3300034177	Sediment	MSMLFSRTAIIPVWLVVFGLFALFGSPMTFATGVVLLLVGGVALTIMLVLWKELPPTIAAMTALDPPLATVPSADFVPNSWPNSGFRNSGRRDTSR
Ga0370546_024938_124_411	3300034681	Soil	MSMLFNRAAIVPMWLLVFGLFVVFQSPMTVATGVVVFLVAGVALTIMLVASKERHTLAPMTAPPALAMVPSAEFVPNSWPNSGYRNSRRRGASSP
Ga0370546_041004_47_337	3300034681	Soil	MSMLFNRAAIVPMWLVVFGLFVLFESPLTFAAGLVLFLVAGVALTTMLVVWKQLHTIAPRTAPNPPLAMLPSAAFVSNSWPDSGFRNSRRRGTRGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056458

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences