Metagenome / Metatranscriptome Family F056407

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056407
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	45 residues
Representative Sequence	LFVISDGGRHIHEVVSEFTPPGFTEPQPTQTSADDWKVASEKD
Number of Associated Samples	89
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.84 %
% of genes near scaffold ends (potentially truncated)	94.89 %
% of genes from short scaffolds (< 2000 bps)	94.89 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (49.635 % of family members)
Environment Ontology (ENVO)	Unclassified (56.204 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.555 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 43.66% Coil/Unstructured: 56.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00108	Thiolase_N	9.49
PF02775	TPP_enzyme_C	4.38
PF08352	oligo_HPY	3.65
PF00174	Oxidored_molyb	2.92
PF02803	Thiolase_C	2.19
PF01799	Fer2_2	2.19
PF10282	Lactonase	1.46
PF13147	Obsolete Pfam Family	1.46
PF05448	AXE1	1.46
PF00239	Resolvase	1.46
PF00486	Trans_reg_C	1.46
PF13432	TPR_16	1.46
PF02322	Cyt_bd_oxida_II	0.73
PF13495	Phage_int_SAM_4	0.73
PF01068	DNA_ligase_A_M	0.73
PF02738	MoCoBD_1	0.73
PF15617	C-C_Bond_Lyase	0.73
PF07687	M20_dimer	0.73
PF02417	Chromate_transp	0.73
PF02776	TPP_enzyme_N	0.73
PF00211	Guanylate_cyc	0.73
PF08388	GIIM	0.73
PF08818	DUF1801	0.73
PF13565	HTH_32	0.73
PF00107	ADH_zinc_N	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	11.68
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	2.92
COG3915	Uncharacterized conserved protein	Function unknown [S]	2.92
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	1.46
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.46
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.46
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.46
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	0.73
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.73
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.73
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.73
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.73
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.73
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.73

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.09 %
Unclassified	root	N/A	48.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.09 %
Unclassified	root	N/A	48.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.09 %
Unclassified	root	N/A	48.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.98 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.46 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.46 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.46 %
Lichenibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae	1.46 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.46 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.46 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.73 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.73 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.92 %
Lichenibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium	1.46 %
Altererythrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter	0.73 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.73 %
Rhizobiales bacterium PAR1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium PAR1	0.73 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.73 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.73 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.73 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples	0.73 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.73 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.92 %
Lichenibacterium ramalinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium ramalinae	1.46 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.73 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.73 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.73 %
Achromobacter aegrifaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter aegrifaciens	0.73 %
Altererythrobacter segetis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter → Altererythrobacter segetis	0.73 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.73 %
Rhizobiales bacterium PAR1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium PAR1	0.73 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.73 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.73 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.92 %
Lichenibacterium ramalinae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium ramalinae	1.46 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.73 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.73 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.73 %
Achromobacter aegrifaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter aegrifaciens	0.73 %
Altererythrobacter segetis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter → Altererythrobacter segetis	0.73 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.73 %
Rhizobiales bacterium PAR1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium PAR1	0.73 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.73 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.73 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_100818979	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300004635\|Ga0062388_102628875	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300005332\|Ga0066388_101639236	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1134	Open in IMG/M
3300005764\|Ga0066903_101890923	Not Available	1143	Open in IMG/M
3300006806\|Ga0079220_10393234	Not Available	902	Open in IMG/M
3300009826\|Ga0123355_11345998	Not Available	711	Open in IMG/M
3300009826\|Ga0123355_11590835	Not Available	630	Open in IMG/M
3300010048\|Ga0126373_10974210	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300010048\|Ga0126373_12501223	Not Available	575	Open in IMG/M
3300010048\|Ga0126373_12606770	Not Available	564	Open in IMG/M
3300010343\|Ga0074044_10935003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	567	Open in IMG/M
3300010358\|Ga0126370_12014604	Not Available	564	Open in IMG/M
3300010360\|Ga0126372_10466921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae → Altererythrobacter → Altererythrobacter segetis	1175	Open in IMG/M
3300010361\|Ga0126378_10700695	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300010376\|Ga0126381_101332340	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300010376\|Ga0126381_103348312	Not Available	632	Open in IMG/M
3300010376\|Ga0126381_103549050	Not Available	612	Open in IMG/M
3300010376\|Ga0126381_105075212	Not Available	504	Open in IMG/M
3300010398\|Ga0126383_12133798	Not Available	647	Open in IMG/M
3300010398\|Ga0126383_12273778	Not Available	628	Open in IMG/M
3300010398\|Ga0126383_13168563	Not Available	537	Open in IMG/M
3300011270\|Ga0137391_10555098	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300012971\|Ga0126369_10212217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1876	Open in IMG/M
3300015264\|Ga0137403_10122419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	2592	Open in IMG/M
3300016270\|Ga0182036_11486781	Not Available	568	Open in IMG/M
3300016294\|Ga0182041_10843917	Not Available	821	Open in IMG/M
3300016341\|Ga0182035_10500660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1037	Open in IMG/M
3300016341\|Ga0182035_10662740	Not Available	906	Open in IMG/M
3300016341\|Ga0182035_11180205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300016357\|Ga0182032_10941873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	736	Open in IMG/M
3300016371\|Ga0182034_11673773	Not Available	559	Open in IMG/M
3300016387\|Ga0182040_10362410	Not Available	1127	Open in IMG/M
3300016404\|Ga0182037_11031028	Not Available	718	Open in IMG/M
3300016404\|Ga0182037_11872931	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300016422\|Ga0182039_11614558	All Organisms → cellular organisms → Bacteria → Proteobacteria	592	Open in IMG/M
3300016445\|Ga0182038_10450656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1089	Open in IMG/M
3300016445\|Ga0182038_11047697	Not Available	723	Open in IMG/M
3300016445\|Ga0182038_11185595	Not Available	680	Open in IMG/M
3300016445\|Ga0182038_12007396	Not Available	524	Open in IMG/M
3300017933\|Ga0187801_10459821	Not Available	535	Open in IMG/M
3300017955\|Ga0187817_10704315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	644	Open in IMG/M
3300017955\|Ga0187817_10969524	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300020579\|Ga0210407_10954476	Not Available	655	Open in IMG/M
3300020580\|Ga0210403_10387883	Not Available	1141	Open in IMG/M
3300020580\|Ga0210403_11343170	Not Available	544	Open in IMG/M
3300020581\|Ga0210399_10708981	Not Available	827	Open in IMG/M
3300020581\|Ga0210399_11065064	Not Available	648	Open in IMG/M
3300020581\|Ga0210399_11516108	Not Available	520	Open in IMG/M
3300020583\|Ga0210401_11365634	Not Available	566	Open in IMG/M
3300021168\|Ga0210406_10303481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300021170\|Ga0210400_11239452	Not Available	600	Open in IMG/M
3300021171\|Ga0210405_10798637	Not Available	723	Open in IMG/M
3300021171\|Ga0210405_11117967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300021178\|Ga0210408_10080248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2557	Open in IMG/M
3300021178\|Ga0210408_11478702	Not Available	509	Open in IMG/M
3300021372\|Ga0213877_10192734	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300021405\|Ga0210387_11640356	Not Available	546	Open in IMG/M
3300021432\|Ga0210384_11350991	Not Available	618	Open in IMG/M
3300021432\|Ga0210384_11525033	Not Available	574	Open in IMG/M
3300021476\|Ga0187846_10419996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium ramalinae	549	Open in IMG/M
3300021560\|Ga0126371_10897976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	1030	Open in IMG/M
3300021560\|Ga0126371_12172434	Not Available	669	Open in IMG/M
3300022512\|Ga0242676_1000457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2135	Open in IMG/M
3300022531\|Ga0242660_1202278	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300022726\|Ga0242654_10190725	Not Available	707	Open in IMG/M
3300027174\|Ga0207948_1016944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	852	Open in IMG/M
3300027297\|Ga0208241_1073478	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300030973\|Ga0075395_11454292	Not Available	764	Open in IMG/M
3300031474\|Ga0170818_104258765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300031474\|Ga0170818_113658900	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300031545\|Ga0318541_10862844	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031564\|Ga0318573_10518372	Not Available	642	Open in IMG/M
3300031573\|Ga0310915_10209165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1366	Open in IMG/M
3300031573\|Ga0310915_10855743	Not Available	638	Open in IMG/M
3300031679\|Ga0318561_10650834	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300031718\|Ga0307474_11172630	Not Available	608	Open in IMG/M
3300031719\|Ga0306917_11282225	Not Available	567	Open in IMG/M
3300031736\|Ga0318501_10349795	Not Available	794	Open in IMG/M
3300031747\|Ga0318502_10041767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2379	Open in IMG/M
3300031747\|Ga0318502_10912968	Not Available	534	Open in IMG/M
3300031751\|Ga0318494_10144590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	1336	Open in IMG/M
3300031751\|Ga0318494_10937485	Not Available	508	Open in IMG/M
3300031753\|Ga0307477_10410219	All Organisms → cellular organisms → Bacteria → Proteobacteria	927	Open in IMG/M
3300031753\|Ga0307477_10663951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300031753\|Ga0307477_11015058	Not Available	544	Open in IMG/M
3300031763\|Ga0318537_10289795	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031768\|Ga0318509_10020128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3108	Open in IMG/M
3300031768\|Ga0318509_10148022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium PAR1	1294	Open in IMG/M
3300031770\|Ga0318521_10619221	Not Available	655	Open in IMG/M
3300031781\|Ga0318547_10206404	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300031781\|Ga0318547_10993816	Not Available	524	Open in IMG/M
3300031796\|Ga0318576_10225199	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300031797\|Ga0318550_10356792	Not Available	708	Open in IMG/M
3300031819\|Ga0318568_10497336	Not Available	760	Open in IMG/M
3300031819\|Ga0318568_10557871	Not Available	714	Open in IMG/M
3300031823\|Ga0307478_10930718	Not Available	727	Open in IMG/M
3300031833\|Ga0310917_10468640	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300031833\|Ga0310917_10677884	Not Available	698	Open in IMG/M
3300031833\|Ga0310917_11158078	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031845\|Ga0318511_10085381	Not Available	1324	Open in IMG/M
3300031879\|Ga0306919_10372910	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300031879\|Ga0306919_10477694	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300031890\|Ga0306925_10582074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1184	Open in IMG/M
3300031890\|Ga0306925_10763338	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300031910\|Ga0306923_10160160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2570	Open in IMG/M
3300031910\|Ga0306923_12010587	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300031941\|Ga0310912_10275979	Not Available	1298	Open in IMG/M
3300031942\|Ga0310916_10540148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter aegrifaciens	992	Open in IMG/M
3300031945\|Ga0310913_10110239	All Organisms → cellular organisms → Bacteria	1871	Open in IMG/M
3300031945\|Ga0310913_10670578	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300031946\|Ga0310910_11263054	Not Available	571	Open in IMG/M
3300031947\|Ga0310909_10459264	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300031954\|Ga0306926_10095668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3636	Open in IMG/M
3300031981\|Ga0318531_10041437	All Organisms → cellular organisms → Bacteria → Proteobacteria	1929	Open in IMG/M
3300032001\|Ga0306922_10723626	Not Available	1046	Open in IMG/M
3300032001\|Ga0306922_11074977	Not Available	826	Open in IMG/M
3300032035\|Ga0310911_10210377	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300032035\|Ga0310911_10723088	Not Available	576	Open in IMG/M
3300032039\|Ga0318559_10218154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300032042\|Ga0318545_10166303	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300032052\|Ga0318506_10564183	Not Available	504	Open in IMG/M
3300032055\|Ga0318575_10355251	Not Available	743	Open in IMG/M
3300032059\|Ga0318533_10219173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1367	Open in IMG/M
3300032059\|Ga0318533_10460084	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300032059\|Ga0318533_11220733	Not Available	550	Open in IMG/M
3300032059\|Ga0318533_11245321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenibacteriaceae → Lichenibacterium → Lichenibacterium ramalinae	544	Open in IMG/M
3300032063\|Ga0318504_10644187	Not Available	510	Open in IMG/M
3300032065\|Ga0318513_10315984	Not Available	759	Open in IMG/M
3300032094\|Ga0318540_10217425	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300032261\|Ga0306920_102097385	Not Available	789	Open in IMG/M
3300032261\|Ga0306920_102138076	Not Available	780	Open in IMG/M
3300032261\|Ga0306920_102798258	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300032261\|Ga0306920_103522608	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300033289\|Ga0310914_10482644	All Organisms → cellular organisms → Bacteria → Proteobacteria	1121	Open in IMG/M
3300033289\|Ga0310914_10521438	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300033289\|Ga0310914_10540201	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300033289\|Ga0310914_11714325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.54%
Host-Associated	Host-Associated	1.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.89%
Aquatic	Environmental → Aquatic	3.65%
Arthropoda	Host-Associated → Arthropoda	1.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.16%
Freshwater	Environmental → Aquatic → Freshwater	3.65%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.46%
Cave	Environmental → Terrestrial → Cave	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.65%
Loam	Environmental → Terrestrial → Soil → Loam	2.92%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.73%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.46%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	49.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.19%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.46%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.46%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.73%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.73%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1008189792	3300004092	Bog Forest Soil	TINIPMQGASTGVLKILFVISDRGHHIHEVVAEFTPPGVANPVPTQSSADDWKVDR*
Ga0062388_1026288752	3300004635	Bog Forest Soil	VLKILFVISDRGHHIHEVVAEFTPPGVANPVPTQSSADDWKVDR*
Ga0066388_1016392361	3300005332	Tropical Forest Soil	MFVISDGGCHIHEVVSESTPPFSSAPVPTQASADDWKVASDEDD*
Ga0066903_1018909232	3300005764	Tropical Forest Soil	LFVISDGGRHIHEVVGSLTLPGNVNVPVQTSADDWKVAPEQNQQQ*
Ga0079220_103932342	3300006806	Agricultural Soil	LFVISDGGRHIHEVVSELTPPFASGPVPVQTSADDWKVAPASEQDNQ*
Ga0123355_113459982	3300009826	Termite Gut	NLSPGHVLEIRFVISNGGRHIHEVVAELTPPGSSGPVPIQTSADDWKVAPSAAEGSQ*
Ga0123355_115908351	3300009826	Termite Gut	GVIDIKFVISNGGRHIHEVVSQFTPPGASGPVPTQTSGDDWQVASAQDQ*
Ga0126373_109742101	3300010048	Tropical Forest Soil	SDGGRHIREVVSPPLGATVPIPVQTSADDWKVASEQ*
Ga0126373_125012232	3300010048	Tropical Forest Soil	ISNGGRHIHEVVSEFTPPGSPVPVPTQTSADDWKVFDEDE*
Ga0126373_126067702	3300010048	Tropical Forest Soil	AEGVINVLFVISDGGRHIREVVSPPLRSTVPIPVQTSVDDWKVASEREDQVR*
Ga0074044_109350031	3300010343	Bog Forest Soil	VIQILFVISDGGRHIHEVVSAFYPPFSSKTVPAPTQTSADDWKVASAQQQ*
Ga0126370_120146042	3300010358	Tropical Forest Soil	GRHIHEVVASFIPAGSIQSVPVQTSADDWKVAPEQDQQQ*
Ga0126372_104669212	3300010360	Tropical Forest Soil	FVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASD*
Ga0126378_107006953	3300010361	Tropical Forest Soil	VLKNLFVISDGGRHANGVISQFTPPFAAAPIPVQMSFEAWKVAP
Ga0126381_1013323401	3300010376	Tropical Forest Soil	GVIDIMFVISDGGRHIHEVVSQFTPPGASGPVSNQTSADDWKVASER*
Ga0126381_1033483121	3300010376	Tropical Forest Soil	HVHDVVSEFTPPGFTEPQPTQTSSDAWKVASEHKR*
Ga0126381_1035490501	3300010376	Tropical Forest Soil	DGGRHIHEVVGSLTAAGSNVPVQTIADDWKVASEQDQQQ*
Ga0126381_1050752122	3300010376	Tropical Forest Soil	DGGRHIHEVVSENTPPRSTGPLHPTQTSADDWKVASDQDQ*
Ga0126383_121337981	3300010398	Tropical Forest Soil	SNGGRHIHEVVSEFTPPFSATPVPTQTSADEWKVESEEGEQ*
Ga0126383_122737781	3300010398	Tropical Forest Soil	GGRHIHEVVSEFTPPGSTEPQANQTSADDWKVASEKDH*
Ga0126383_131685631	3300010398	Tropical Forest Soil	LFVISNGGRHIHYVVSEFTPPGATGPEPAQTSVDAWKVASEHDD*
Ga0137391_105550981	3300011270	Vadose Zone Soil	LFVITDCGRHLHEVVSEFTPPGFTTPQPTQTSADDWKVASERDD*
Ga0126369_102122171	3300012971	Tropical Forest Soil	ISDGGRHIHEVVSEFTPPGFSEPQPTQTSADVWKVASEREN*
Ga0137403_101224193	3300015264	Vadose Zone Soil	ISDGGRHIHEVVSEFFPPFSSPSVPVPTQTSADDWKVASERDD*
Ga0182036_114867812	3300016270	Soil	VPNVPAGLSISDGGRHIHEVVSQLTPPFSSGPVPTQTSADDWKVASEQDH
Ga0182041_108439172	3300016294	Soil	GILFVISDGGRHIREVVSENIPPGAPGPVPVQTRADDWKVASEQDSQ
Ga0182035_105006603	3300016341	Soil	VTTQGGMIGILFVISDGGRHIHEVVSENIPPGAHGPVPVQTSADDWKVASEQND
Ga0182035_106627401	3300016341	Soil	VAKILFVISDGGRGIHEVVSQFTPPGASAPVSNQTSADDWKVASDKDYLDRR
Ga0182035_111802051	3300016341	Soil	TGVIWIKFVISGGGRQIHEVVSELIPPFGIGRVPTQTSADDWKVASDKD
Ga0182032_109418731	3300016357	Soil	PPLGGELEILFVISNGGRHIHEVVSQFTPPFSSGPAPIQTSADDWMVAAAQDNQ
Ga0182034_116737732	3300016371	Soil	FVISNGGRHIHEVVSEFTPPGAFGPVSNQSSADDWKVASEQEQ
Ga0182040_103624101	3300016387	Soil	ILFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASD
Ga0182037_110310282	3300016404	Soil	SGVINIKFVISDGGRHIHEVVSEFFPPLSSPSVPVPTQTSADDWKVASYQ
Ga0182037_118729311	3300016404	Soil	LFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASERDY
Ga0182039_116145581	3300016422	Soil	WIKFVISDGGRHIHEVVSQLTPPFQSAPVPTQTSADDWKVASEQQQ
Ga0182038_104506561	3300016445	Soil	ILFVISDGGRHIHEVVSENIPPGAHGPVPVQTSADDWKVASEQND
Ga0182038_110476972	3300016445	Soil	GVINIKFVISDGGRHIHEVVSEFFPPFSSPSVPVPTQTSADDWKVASYQ
Ga0182038_111855951	3300016445	Soil	IHEVVSENIPPGAPGPVPVQTRADDWKVASEQDSQ
Ga0182038_120073961	3300016445	Soil	TVFVISDGGRHTHDVVAEFTPPGFTEPQPTQTSSDAWKVASEQER
Ga0187801_104598211	3300017933	Freshwater Sediment	IMFVISDGGRHIHEVVSQFTPPGSSGPVPTQTSADDWKVASGQGH
Ga0187817_107043151	3300017955	Freshwater Sediment	RHVREVVTELTPPGSTTGPVPTQTSVDVWKVASEQKY
Ga0187817_109695241	3300017955	Freshwater Sediment	IHEVVSAFFPPFSSVTVPAPTQTSADDWKVASEQDQ
Ga0210407_109544762	3300020579	Soil	IEIAFVISDGGRHIHEVVAEFTPPGFTEPQPTQTSADDWKVASDRNN
Ga0210403_103878833	3300020580	Soil	LFVISDGGRHIHEVVSEFTPPGFTEPQPTQTSADDWKVASEKD
Ga0210403_113431702	3300020580	Soil	LVISNGGRNFHGVASEYTPPGFTAPQPTQSNFDAWKVASDRDD
Ga0210399_107089812	3300020581	Soil	ISNGGRHFHDVVSEYIPPGFTEPQPTQTSSDAWKVALNHDD
Ga0210399_110650641	3300020581	Soil	ISDGGRHIHEVVAEFTPPGFTTPQPTQTSADDWKVASERDE
Ga0210399_115161081	3300020581	Soil	IDIMFVISDGGRHIHEVVSQSTPPGSTVPVHPTQTSADDWKVASEKTTNSR
Ga0210401_113656341	3300020583	Soil	MFVISDGGRHIHEVVSEFTPPGFTEPQPTQTSADDWKVASEKDH
Ga0210406_103034811	3300021168	Soil	AFHEVVAEFTPPGATQPVPTQTRADDWKVGLEQDN
Ga0210400_112394521	3300021170	Soil	VFVISDGGRHIHDVVSEFTPPGFTTPQPTQTSSDHWKVASNRDD
Ga0210405_107986372	3300021171	Soil	MFVISGGGRHIHEVVSEFTPPGFTTPQPTQTSADDWKVASEQDN
Ga0210405_111179672	3300021171	Soil	FVISDGGRHIHEVVSQNTPPGSTGPLHPTQTSADDWKVASEQQH
Ga0210408_100802483	3300021178	Soil	HIHEVVSEFIPPGFTTPQPTQTSADDWKVASEQDN
Ga0210408_114787021	3300021178	Soil	MFVISDGGRHIHEVVLEFTPPGFTEPQPTQTSADDWKVASEKDH
Ga0213877_101927342	3300021372	Bulk Soil	VIKVLFVISDGGRHIHEVVTELTPPGSTTGPVPTQTSVDVWKVASAQNR
Ga0210387_116403561	3300021405	Soil	TGSTGVINILFVIADGGRHIHEVVSAFTPPGAPGPVTTHTSADDWKVAPEQDDER
Ga0210384_113509911	3300021432	Soil	LEIMFVISDGGRHIHEVVAEFTPPGFTTPQPTQTSADDWKVASEHDN
Ga0210384_115250331	3300021432	Soil	TPPPHGVIKIMFVISGGGRHIHEVVSEFIPPGFTTPQPTQTSADDWKVASEQDN
Ga0187846_104199961	3300021476	Biofilm	GRHMHGVVSEFTPPGFPVGTSVPTQTSFDHWKVASEEDN
Ga0126371_108979762	3300021560	Tropical Forest Soil	EILFVISNGGRHIHEVVSQFTPPFSSAPTPVQTSADDWMVAPAQDQDN
Ga0126371_121724341	3300021560	Tropical Forest Soil	IHEVVSENIPPGAPGPVPTQTSADDWKVASEQDQQQ
Ga0242676_10004571	3300022512	Soil	HIHEVVSAFFPPFSSATVPAPTQTSADDWKVASQQDQ
Ga0242660_12022782	3300022531	Soil	STGVINILFVISDGGRHIHEVVSQFTPPGSSGPQPTQTSADDWKVTSDQDN
Ga0242654_101907251	3300022726	Soil	VISDGGRHIHEVVSEVTPPGSTTGPVPTQTSADNWKVASEKDD
Ga0207948_10169442	3300027174	Forest Soil	HEVVSAFFPPFSSATVPAPTQTSADDWKVASEHDN
Ga0208241_10734781	3300027297	Forest Soil	LSSGVIEIKFVISDGGRHIHEVVSQLTPPFQSAPVPTQTSADDWKVASGRGD
Ga0075395_114542922	3300030973	Soil	PGRSSGIINIKFVISDGGRHIHEVVSEFFPPFSSASVPAPTQTSADDWKVASEDRND
Ga0170818_1042587652	3300031474	Forest Soil	ISDGGRHIHEVVAEFTPPGATGPVPTQTSADDWKVASEEDD
Ga0170818_1136589001	3300031474	Forest Soil	PGTSSGVINILFVISDGGRHIHEVVAAFFPPFSSATVPVPTQTSADDWKVASDRDD
Ga0318541_108628442	3300031545	Soil	EILFVISDGGRHIHEVVSQITQPFSSAPEPVQTSADDWKVASE
Ga0318573_105183721	3300031564	Soil	GMIGILFVICDGGRHIREVVSENIPPGAPGPVPVQTRADDWKVASEQDSQ
Ga0310915_102091651	3300031573	Soil	IDIMFVISDGGRHIHAVVSQFTRPGSSGPVPTQTSADDWKVASDKD
Ga0310915_108557431	3300031573	Soil	VIKTVFVISDGGRHLHDVVAEFTPPGFTEPQPTQTSSDAWKVASEKDQ
Ga0318561_106508342	3300031679	Soil	ISDGGRHVHEVVSELTPPGSTTGPAPTQTSVDVWKVASQQEQ
Ga0307474_111726302	3300031718	Hardwood Forest Soil	SGTSSGVIDIMFVISDGGRHIHEVVSQNTPPGSTGPLHPTQTSADDWKVASEQQH
Ga0306917_112822251	3300031719	Soil	IDIMFVISDGGRHIHEVVSQATPPGSTGPTHPTQTSADDWKVTSERDD
Ga0318501_103497952	3300031736	Soil	LFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASD
Ga0318502_100417673	3300031747	Soil	MFVISDGGRHIPEVVSQATPPGSAGPMHPTQTSADDWKVTSERDD
Ga0318502_109129681	3300031747	Soil	RIETVFVISDGGRHLHDVVARFTPPGFTTAQPTQTSSDAWKVGSER
Ga0318494_101445902	3300031751	Soil	LEIRFVISNGGRHIHEVVAEFTPPGFTAPQPTQTSADDWKVGSDE
Ga0318494_109374851	3300031751	Soil	GVIHTVFVISDGGRHTHDVVAEFTPPGFTEPQPTQTSSDAWKVASEHER
Ga0307477_104102191	3300031753	Hardwood Forest Soil	FVISNGGRHIHEVVSQFIPPGASGPVSNQTSADDWKVASEQER
Ga0307477_106639511	3300031753	Hardwood Forest Soil	RGFHEVVAEFTPPGATQPVPTQTRADDWKVGLEQDN
Ga0307477_110150581	3300031753	Hardwood Forest Soil	SGVIDIMFVISDGGRHIHEVVSQFTPPFFAAPQPTQTSADDWKVASERGR
Ga0318537_102897952	3300031763	Soil	NIMFVISNGGRHIHEVVSQFTPPGASGPVSNQTSADDWKVASEQEQ
Ga0318509_100201281	3300031768	Soil	ILFVICDGGRHIREVVSENIPPGAPGPVPVQTRADDWKVASEQDSQ
Ga0318509_101480222	3300031768	Soil	SSGVLEIRFVISDGGRHIHEVVAEFTPPGFTEPQPTQTSVDDWKVAPERGD
Ga0318521_106192212	3300031770	Soil	GSTGVINIMFVISNGGRHIHEVVSEFIPPGASGPVSNQTSADDWKVASEQEQ
Ga0318547_102064042	3300031781	Soil	IETVFVISDGGRHLHDVVARFTPPGFTTAQPTQTSSDAWKVGSER
Ga0318547_109938161	3300031781	Soil	CDGGRHIREVVSENIPPGAPGPVPVQTRADDWKVASEQDSQ
Ga0318576_102251991	3300031796	Soil	EIRFVISDGGRHIHEVVAEFTPPGFTEPQPTQTSVDDWKVAPERGD
Ga0318550_103567921	3300031797	Soil	TVFVISDGGRHLHDVVARFTPPGFTTAQPTQTSSDAWKVGSER
Ga0318568_104973361	3300031819	Soil	IGILFVICDGGRHIREVVSENIPPGAPGPVPVQTRADDWKVASEQDSQ
Ga0318568_105578711	3300031819	Soil	IKVLFVISDGGRHVHEVVSEFIPPFAPGRVPTQTSADAWKVASEQDD
Ga0307478_109307182	3300031823	Hardwood Forest Soil	PPNGVIWILFVISDGGRHIHEVVSKLIPPFSSTPEAVQTSADDWKVASEQDQQR
Ga0310917_104686401	3300031833	Soil	SINFVISNGGRHIHEVVSEFTPPGSAGPAHPTQTTADDWKVALEQDQQQ
Ga0310917_106778842	3300031833	Soil	RHVHEVVSEFIPPFAPGRVPTQTSADAWKVASEQDD
Ga0310917_111580781	3300031833	Soil	ADIHEVVSEFIPPGASGPVTNQTSADDWKVASEKND
Ga0318511_100853811	3300031845	Soil	PNGVIQILFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASD
Ga0306919_103729102	3300031879	Soil	NVPAGLSISDGGRHIHEVVSQLTPPFSSGPVPTQTSADDWKVASEQDH
Ga0306919_104776941	3300031879	Soil	FVISDGGRHIHEVVSQLTPPFSSTPEAVQTSADDWKVASERNY
Ga0306925_105820741	3300031890	Soil	LFVISDGGRHIHEVVSQLTPPFSSGPAPTQTSADDWKVASEQDD
Ga0306925_107633381	3300031890	Soil	PPVTTQGGMIGILFVISDGGRHIHEVVSENIPPGAPGPVPVQTSADDWKVASEQND
Ga0306923_101601601	3300031910	Soil	PGTSSGVLEIRFVISDGGRHIHEVVAEFTPPGFTEPQPTQTSVDDWKVAPERGD
Ga0306923_120105872	3300031910	Soil	TGIINIMCVISDGGRHIHEVVAEFTPPGAPGPVATQTSADDWKVASEEDN
Ga0310912_102759792	3300031941	Soil	GRAPAQRNDRNLFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASERDY
Ga0310916_105401482	3300031942	Soil	GKIETVSVISNGGRHIHGVVSRFTPPGATGPAPTQTSFDHWKVAAEQDD
Ga0310913_101102391	3300031945	Soil	VSVISNGGRHIHGVVSRFTPPGATGPAPTQTSFDHWKVAAEQDD
Ga0310913_106705781	3300031945	Soil	GMIGILFVISDGGRHIHEVVSENIPPGAPGPVPVQTSADDWKVASEQND
Ga0310910_112630541	3300031946	Soil	VIQILFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASD
Ga0310909_104592641	3300031947	Soil	FVISDGGRHIREVVSENIPPGAPGPVPVQTRADDWKVASEQDSQ
Ga0306926_100956681	3300031954	Soil	NLFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASERDY
Ga0318531_100414374	3300031981	Soil	NVPGAPPPNGVIQILFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASD
Ga0306922_107236261	3300032001	Soil	MLFGWRVISVKFVISDGGRHVHEVVSEFTSPGSSTGPAPTQTNVDVWKV
Ga0306922_110749771	3300032001	Soil	KIMFVISNGGRHIHEVVSQFIPPGSTQPVPTQTSADDWKVASAQQQ
Ga0310911_102103771	3300032035	Soil	GVIEIKFVISDGGRHIHEVVSQGTPPGSTGPSHPTQTSADDWKVASEQER
Ga0310911_107230881	3300032035	Soil	ILFVISDGGRHIHEVVSQLTPPFSSTPEAVQTSADDWKVASERNY
Ga0318559_102181541	3300032039	Soil	NGGRHIHEVVAEFTPPGFTEPQPTQTSADDWKVTSERDD
Ga0318545_101663031	3300032042	Soil	RHIHEVVAEFTPPGFTEPQPTQTSVDDWKVAPERGD
Ga0318506_105641831	3300032052	Soil	PPNGVIEILFVISDGGRHIHEVVSQLTPPFSSTPEAVQTSADDWKVASERNY
Ga0318575_103552512	3300032055	Soil	DSGRHVHEVVSELTPPGSTTGPAPTQTSVDVWKVASQQEQ
Ga0318533_102191731	3300032059	Soil	IGILFVISDGGRHIHEVVSENIPPGAHGPVPVQTSADDWKVASEQND
Ga0318533_104600842	3300032059	Soil	PGSPPPNGVIEILFVISDGGRHIHEVVSQLTPPFSSTPEAVQTSADDWKVASERNY
Ga0318533_112207331	3300032059	Soil	GTSSGVLEIRFVISNGGRHIHEVVAEFTPPGFSEPQSTQTSADDWKVASEQDD
Ga0318533_112453212	3300032059	Soil	GGRHIHEVVSKFFPPFSSASVPVPTQTSADDWKVAFEQED
Ga0318504_106441872	3300032063	Soil	SDGGRHIHEVVSQATPPGSTGPTHPTQTSADDWKVTSERDD
Ga0318513_103159841	3300032065	Soil	PAQRNDRNLFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASD
Ga0318540_102174251	3300032094	Soil	LEIRFVISDGGRHIHEVVARFTPPGFSEPQPTQTSADDWKVASARDD
Ga0306920_1020973852	3300032261	Soil	GRHIHEVVAEFTPPGAPGPVATQTSADDWKVASEEDN
Ga0306920_1021380762	3300032261	Soil	PGTSSGVIDIKFVISDGGRHVHEVVSQFIPPFFAAPQPTQTSADDWKVASAQQQ
Ga0306920_1027982582	3300032261	Soil	VIQILFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASE
Ga0306920_1035226081	3300032261	Soil	GRHIHEVVSEFTPPGAFGPVSNQSSADDWKVASEQEQ
Ga0310914_104826441	3300033289	Soil	QRNDRNLFVISDGGRHIHEVVSQLTPPFSSAPEPVQTSADDWKVASERDY
Ga0310914_105214382	3300033289	Soil	SDGGRHIHEVVSQLTPPFSSTPEAVQTSADDWKVASERNY
Ga0310914_105402011	3300033289	Soil	MIGILFVISDGGRHIHEVVSENIPPGAPGPVPVQTSADDWKVASEQND
Ga0310914_117143252	3300033289	Soil	INIKFVISNGGRHIHEVVSKFFPPFSSASVPVPTQTSADDWKVAFEQED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056407

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences