NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F056395

Metagenome / Metatranscriptome Family F056395

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F056395
Family Type Metagenome / Metatranscriptome
Number of Sequences 137
Average Sequence Length 79 residues
Representative Sequence VPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRYRRALQIKAMLAEILHPELATEDDEDWRRL
Number of Associated Samples 54
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 62.77 %
% of genes near scaffold ends (potentially truncated) 40.88 %
% of genes from short scaffolds (< 2000 bps) 95.62 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (54.745 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(30.657 % of family members)
Environment Ontology (ENVO) Unclassified
(36.496 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.095 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 63.55%    β-sheet: 0.00%    Coil/Unstructured: 36.45%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 137 Family Scaffolds
PF05443ROS_MUCR 28.47
PF10108DNA_pol_B_exo2 3.65
PF06035Peptidase_C93 2.19
PF09361Phasin_2 2.19
PF01923Cob_adeno_trans 2.19
PF00496SBP_bac_5 1.46
PF12836HHH_3 1.46
PF01544CorA 0.73
PF02308MgtC 0.73
PF01695IstB_IS21 0.73
PF00762Ferrochelatase 0.73
PF01381HTH_3 0.73
PF00239Resolvase 0.73
PF07929PRiA4_ORF3 0.73
PF09722Xre_MbcA_ParS_C 0.73
PF07045DUF1330 0.73
PF069833-dmu-9_3-mt 0.73
PF03167UDG 0.73
PF04392ABC_sub_bind 0.73
PF01434Peptidase_M41 0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 137 Family Scaffolds
COG4957Predicted transcriptional regulatorTranscription [K] 28.47
COG3672Predicted transglutaminase-like proteinPosttranslational modification, protein turnover, chaperones [O] 2.19
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.73
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 0.73
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.73
COG3663G:T/U-mismatch repair DNA glycosylaseReplication, recombination and repair [L] 0.73
COG3174Membrane component of predicted Mg2+ transport system, contains DUF4010 domainInorganic ion transport and metabolism [P] 0.73
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.73
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.73
COG0276Protoheme ferro-lyase (ferrochelatase)Coenzyme transport and metabolism [H] 0.73
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.73
COG1573Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.73
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 0.73
COG1285Magnesium uptake protein YhiD/SapB, involved in acid resistanceInorganic ion transport and metabolism [P] 0.73
COG0692Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.73
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 0.73
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 0.73


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A54.74 %
All OrganismsrootAll Organisms45.26 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_118505694Not Available566Open in IMG/M
3300002568|C688J35102_119624062Not Available734Open in IMG/M
3300002568|C688J35102_120251539Not Available950Open in IMG/M
3300002568|C688J35102_120443342Not Available1073Open in IMG/M
3300002568|C688J35102_120767314All Organisms → cellular organisms → Bacteria → Proteobacteria1524Open in IMG/M
3300002568|C688J35102_120876222Not Available1958Open in IMG/M
3300002568|C688J35102_120983590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae5500Open in IMG/M
3300003572|Ga0007424J51698_1031781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1357Open in IMG/M
3300003572|Ga0007424J51698_1041017All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales505Open in IMG/M
3300003572|Ga0007424J51698_1133713Not Available531Open in IMG/M
3300004153|Ga0063455_100445928Not Available783Open in IMG/M
3300004157|Ga0062590_101321704All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300005093|Ga0062594_101902803Not Available631Open in IMG/M
3300005343|Ga0070687_101252893All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens549Open in IMG/M
3300005364|Ga0070673_101119690Not Available736Open in IMG/M
3300005618|Ga0068864_102377622Not Available536Open in IMG/M
3300006844|Ga0075428_100520112Not Available1273Open in IMG/M
3300006844|Ga0075428_101639153Not Available672Open in IMG/M
3300006845|Ga0075421_101517541Not Available732Open in IMG/M
3300009094|Ga0111539_10773780Not Available1117Open in IMG/M
3300009094|Ga0111539_11335712Not Available832Open in IMG/M
3300009098|Ga0105245_13085768Not Available516Open in IMG/M
3300009156|Ga0111538_10551673All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1461Open in IMG/M
3300009156|Ga0111538_12388344Not Available664Open in IMG/M
3300009789|Ga0126307_10028262All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4297Open in IMG/M
3300009789|Ga0126307_10128304All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2024Open in IMG/M
3300009789|Ga0126307_10142208All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1918Open in IMG/M
3300009789|Ga0126307_10250383All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1424Open in IMG/M
3300009789|Ga0126307_10326026All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1236Open in IMG/M
3300009789|Ga0126307_10379627All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300009789|Ga0126307_10496670All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria985Open in IMG/M
3300009789|Ga0126307_11774119Not Available502Open in IMG/M
3300009840|Ga0126313_10201964Not Available1526Open in IMG/M
3300009840|Ga0126313_10340858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1179Open in IMG/M
3300009840|Ga0126313_10374041All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300009840|Ga0126313_11542075Not Available552Open in IMG/M
3300009840|Ga0126313_11591756All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria544Open in IMG/M
3300010036|Ga0126305_10276063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 113-1-21086Open in IMG/M
3300010036|Ga0126305_10385575Not Available922Open in IMG/M
3300010036|Ga0126305_10890734Not Available607Open in IMG/M
3300010037|Ga0126304_10273330All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1115Open in IMG/M
3300010037|Ga0126304_10480640Not Available833Open in IMG/M
3300010038|Ga0126315_10993552Not Available562Open in IMG/M
3300010039|Ga0126309_10199484All Organisms → cellular organisms → Bacteria → Proteobacteria1107Open in IMG/M
3300010039|Ga0126309_10485437All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300010040|Ga0126308_10085522Not Available1906Open in IMG/M
3300010040|Ga0126308_10344923Not Available986Open in IMG/M
3300010040|Ga0126308_10400805Not Available915Open in IMG/M
3300010040|Ga0126308_10820343All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria645Open in IMG/M
3300010040|Ga0126308_10888941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales620Open in IMG/M
3300010041|Ga0126312_10439833Not Available930Open in IMG/M
3300010041|Ga0126312_10590466Not Available798Open in IMG/M
3300010041|Ga0126312_11073551Not Available591Open in IMG/M
3300010041|Ga0126312_11244774Not Available549Open in IMG/M
3300010042|Ga0126314_10158314All Organisms → cellular organisms → Bacteria1581Open in IMG/M
3300010042|Ga0126314_10679875Not Available753Open in IMG/M
3300010042|Ga0126314_10768327Not Available708Open in IMG/M
3300010044|Ga0126310_10020504All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3300Open in IMG/M
3300010045|Ga0126311_10425480All Organisms → cellular organisms → Bacteria1026Open in IMG/M
3300010045|Ga0126311_10507745Not Available944Open in IMG/M
3300010045|Ga0126311_10534431All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria921Open in IMG/M
3300010045|Ga0126311_10735476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales791Open in IMG/M
3300010166|Ga0126306_10264878Not Available1315Open in IMG/M
3300010166|Ga0126306_10687903Not Available819Open in IMG/M
3300010166|Ga0126306_10756973Not Available782Open in IMG/M
3300010166|Ga0126306_10884079Not Available724Open in IMG/M
3300010375|Ga0105239_13428914Not Available515Open in IMG/M
3300010403|Ga0134123_13157322Not Available530Open in IMG/M
3300012212|Ga0150985_100000601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis1381Open in IMG/M
3300012212|Ga0150985_102740849Not Available753Open in IMG/M
3300012212|Ga0150985_103113471All Organisms → cellular organisms → Bacteria → Proteobacteria2215Open in IMG/M
3300012212|Ga0150985_104028767Not Available815Open in IMG/M
3300012212|Ga0150985_106660401Not Available579Open in IMG/M
3300012212|Ga0150985_106666248Not Available768Open in IMG/M
3300012212|Ga0150985_107272328All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales692Open in IMG/M
3300012212|Ga0150985_107600965Not Available874Open in IMG/M
3300012212|Ga0150985_110762413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1434Open in IMG/M
3300012212|Ga0150985_111763673Not Available531Open in IMG/M
3300012212|Ga0150985_114323807Not Available925Open in IMG/M
3300012212|Ga0150985_114330551Not Available680Open in IMG/M
3300012212|Ga0150985_115700206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1014Open in IMG/M
3300012212|Ga0150985_116889481Not Available672Open in IMG/M
3300012212|Ga0150985_117200813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria730Open in IMG/M
3300012212|Ga0150985_117442714All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300012212|Ga0150985_117934229Not Available952Open in IMG/M
3300012212|Ga0150985_119888728All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1748Open in IMG/M
3300012212|Ga0150985_119908948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria686Open in IMG/M
3300012212|Ga0150985_120473451Not Available507Open in IMG/M
3300012212|Ga0150985_120880847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales593Open in IMG/M
3300012212|Ga0150985_122238318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales567Open in IMG/M
3300012469|Ga0150984_100005774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales666Open in IMG/M
3300012469|Ga0150984_102166904Not Available861Open in IMG/M
3300012469|Ga0150984_102567833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1609Open in IMG/M
3300012469|Ga0150984_102685972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1878Open in IMG/M
3300012469|Ga0150984_104314375Not Available824Open in IMG/M
3300012469|Ga0150984_105015986All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1096Open in IMG/M
3300012469|Ga0150984_105294295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria814Open in IMG/M
3300012469|Ga0150984_107054754All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales672Open in IMG/M
3300012469|Ga0150984_109397392All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1313Open in IMG/M
3300012469|Ga0150984_109544959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria807Open in IMG/M
3300012469|Ga0150984_111141168All Organisms → cellular organisms → Bacteria → Proteobacteria1781Open in IMG/M
3300012469|Ga0150984_113971899Not Available975Open in IMG/M
3300012469|Ga0150984_116386346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1076Open in IMG/M
3300012469|Ga0150984_118237945Not Available719Open in IMG/M
3300012469|Ga0150984_119371468All Organisms → cellular organisms → Bacteria → Proteobacteria2429Open in IMG/M
3300012469|Ga0150984_119767620Not Available1577Open in IMG/M
3300012469|Ga0150984_121475111Not Available633Open in IMG/M
3300012469|Ga0150984_123050249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria713Open in IMG/M
3300012897|Ga0157285_10274047Not Available563Open in IMG/M
3300012902|Ga0157291_10100758All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales786Open in IMG/M
3300012915|Ga0157302_10488215Not Available529Open in IMG/M
3300012958|Ga0164299_10456178Not Available838Open in IMG/M
3300013306|Ga0163162_11007836Not Available942Open in IMG/M
3300013306|Ga0163162_12423717Not Available603Open in IMG/M
3300014745|Ga0157377_11208163Not Available586Open in IMG/M
3300015201|Ga0173478_10650083Not Available556Open in IMG/M
3300018466|Ga0190268_10575142Not Available790Open in IMG/M
3300018469|Ga0190270_10266567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1502Open in IMG/M
3300018469|Ga0190270_10561288Not Available1103Open in IMG/M
3300018469|Ga0190270_11029112Not Available852Open in IMG/M
3300018476|Ga0190274_13252794Not Available547Open in IMG/M
3300018481|Ga0190271_10813395All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1059Open in IMG/M
3300018481|Ga0190271_12096936Not Available673Open in IMG/M
3300019356|Ga0173481_10558973Not Available594Open in IMG/M
3300025940|Ga0207691_10735246All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium831Open in IMG/M
3300025961|Ga0207712_11388125Not Available628Open in IMG/M
3300026075|Ga0207708_10740090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium843Open in IMG/M
3300027909|Ga0209382_11478647Not Available678Open in IMG/M
3300028379|Ga0268266_11472774All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300028778|Ga0307288_10429292Not Available541Open in IMG/M
3300028872|Ga0307314_10175472Not Available633Open in IMG/M
3300031093|Ga0308197_10460428All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales512Open in IMG/M
3300031731|Ga0307405_11571859Not Available580Open in IMG/M
3300031854|Ga0310904_10191993All Organisms → cellular organisms → Bacteria → Proteobacteria1224Open in IMG/M
3300031908|Ga0310900_10165169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1517Open in IMG/M
3300032002|Ga0307416_100858698All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1006Open in IMG/M
3300032013|Ga0310906_10623069All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria746Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil30.66%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere18.25%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere13.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil5.84%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.46%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.46%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.73%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.73%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.73%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003572Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_40 (Metagenome Metatranscriptome, Counting Only)Host-AssociatedOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_11850569423300002568SoilMPKLDRSLAIGRANYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELDVRLCRARQIKVMLAEILHPERMEENDEEWRQL*
C688J35102_11962406223300002568SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHRSLGHLEVRFRRALQIKGMLAEILHPELATEDDEDWRRL*
C688J35102_12025153913300002568SoilMPKLHRSFALGRASYQRWLGTEPDEMAAAGEVLRRFAPEHSCLLELEVRLCRARQIKGLLAEIRHPERMEESDEDWRRL*
C688J35102_12044334213300002568SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAMLAEILRPELATDDDEDWRRL*
C688J35102_12076731413300002568SoilVPKLDNSLALGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALRIKAMLAEILHPELATEDDEEWRRL*
C688J35102_12087622243300002568SoilVPKLDSSLALGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAILAEILHPELATEDDEDWRRL*
C688J35102_12098359063300002568SoilMPKLDRSLAIGRASYQRWLGTEPAEIAAAAEALRQFEPEHPCLLELEVRLRRALQIKGILAEVLHPELANQDDEDWRRL*
Ga0007424J51698_103178113300003572Avena Fatua RhizosphereEVAMPKLDRSLAIGRASYQRWLGTEPAEIAAAAEALRQFEPEHPCLLELEVRLRRALQIKGILAEVLHPELANQDDEDWRRL*
Ga0007424J51698_104101713300003572Avena Fatua RhizosphereGAAVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLGHLEVRFRRALQIKGMLAEILHPELATEDDEDWRRL*
Ga0007424J51698_113371313300003572Avena Fatua RhizosphereERWAMPKLDRSLAIGRASYQRWLGTEPEEIAAATEVLRRFAPEHPYLLELEVRLCRARRIKAMLAEILHPERMDENDEEWRQL*
Ga0063455_10044592823300004153SoilVPKLDSSIVIGRATYERWLGTEPDEIAAATEALHRFEPEHPSLAHLDVRYRRALQIKAMLAEILRPELAAEDDEDWRR
Ga0062590_10132170423300004157SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRHFEPEHPSLVHLEVRFRRALQIKAMLAEILRPELATEDDEEWRRL*
Ga0062594_10190280323300005093SoilMPKLDRSLAIGRANYQRWLGTEPDEIVASAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAGILHPERMEEWRRL*
Ga0070687_10125289313300005343Switchgrass RhizosphereMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAGILHPERMEEWRRL*
Ga0070673_10111969023300005364Switchgrass RhizosphereMPKLDRSLAIGRASYQRWLGTEPDEIAAAAEVLCRFAPEHSCLLELDVRLCRARQIKAMLAGILHPERMEEWRRL*
Ga0068864_10237762213300005618Switchgrass RhizosphereMPKLDRSLAIGRASYQRWLGTEPEEIAASAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAEILQPERMEENDEEWRRL*
Ga0075428_10052011213300006844Populus RhizosphereVSKLDSSLVIGRATFERWLGTEPDEIAAAAEALRRFEPEHPSLGDLEVRYRRALQIKAMLAEILNSELATEDDEEWRWL*
Ga0075428_10163915323300006844Populus RhizosphereTYERWLGTEPDEITAAADALRHFEPSHPSLVNLEVRLRRARQIKAMLFDILHPELASDDDEDWRRL*
Ga0075421_10151754133300006845Populus RhizosphereVSKLDSSLVIGRATFERWLGTEPDEIAAAAEALRRFEPEHPSLGDLEVRYRRALQIKAVLAEILHPELAAEDDEDWRR
Ga0111539_1077378023300009094Populus RhizosphereMQKLDSSLALGRATYERWLGTEPAAIAAAAEALRRFEPEHPCLLELEVRLRRALQIKGILAEALHPELGNEDEDWRRL*
Ga0111539_1133571213300009094Populus RhizosphereVDRSLALGRATYARWLGTEPEEITAAADALRHFEPSHPSLVNLEVRLRRARQIKAMLFDILHPELASDDDEDWRRL*
Ga0105245_1308576823300009098Miscanthus RhizosphereVPKLDSSLAIGRATYERWLGTEPDEIATAAEALRRFEPEHPSLVHLEVRFRRALQIKAMLAEILRP
Ga0111538_1055167323300009156Populus RhizosphereMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFALEHPCLLELEVRLCRARQIKAMLAEILQPERMEENDEEWRRL*
Ga0111538_1238834413300009156Populus RhizosphereMQKLDSSLALGRATYERWLGTEPAAIAAAAEALRRFEPEHPCLLELEVRLRRALQIKGILTEALHPELGNEDEDWRRL*
Ga0126307_1002826283300009789Serpentine SoilMPKLDHSLAIGRASYQRWLGTEPEEIAAAAEVLRRLAPEHPCLLELEVRLCRARQIKAMLAEILQPERMEENDEEWRRL*
Ga0126307_1012830413300009789Serpentine SoilKGGGLCQSWTVLLQSVARWLGTEPEEITAAAEVLRRFAPEHPCLLELEVRLCCARQIKAMLAKILQPERMEENDEEWRRL*
Ga0126307_1014220843300009789Serpentine SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEGLRRFEPEHPSLMHLKVRLRRALQIKAMLAEILYLELATDDDEDWRRL*
Ga0126307_1025038323300009789Serpentine SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAMLAEILRPELATEDDEEWRRL*
Ga0126307_1032602623300009789Serpentine SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFHRALQIKAMLAEILPPELETDDDEDWRRL*
Ga0126307_1037962723300009789Serpentine SoilMVSSAHGGCTVSKLDSSLVVGRATYERWLGTEPSEIAASAEALHRCEPEHPSLANLELRLRRARQMKAMLEEVLHSELAAEDDEDWRRL*
Ga0126307_1049667013300009789Serpentine SoilMPKLDRSLAIGRANYQQWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAEILHPERMEENDEEWRRL*
Ga0126307_1177411923300009789Serpentine SoilVDRSLALGRATYERWLGTEPDEITAAADALRHFEPSHPSLVDLEVRLRRARQIKAMLFDILHPELASDDDE
Ga0126313_1020196413300009840Serpentine SoilMARLWQKASPDGKVRAVKKLDSSLALGRATYERWLGTEPDEITAAADALRHFEPKHPSLVDLEVRLRRARQIKAMLADILHRELASDDDEDWRRL*
Ga0126313_1034085823300009840Serpentine SoilVPKLDSSFAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAMLAEILRPELATEDDEEWRL*
Ga0126313_1037404123300009840Serpentine SoilRWAMPKLDHSLAIGRASYQRWLGTEPEEIAAAAEVLRRLAPEHPCLLELEVRLCRARQIKAMLAEILQPERMEENDEEWRRL*
Ga0126313_1154207523300009840Serpentine SoilVPKLDSSIVIGRATYELWLGTEPDEIAAATEALRRFEPEHPSLVHLEVRFRRAVQIKAMLAEILHPELETDDDEDWRRL*
Ga0126313_1159175623300009840Serpentine SoilANYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAEILHPERMEENDEEWRRL*
Ga0126305_1027606323300010036Serpentine SoilVSKLDSSLALGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLAHLEVRFRRALQIKAMLADILRPEPMEENDEEWRQL*
Ga0126305_1038557513300010036Serpentine SoilVDRSLALGRATYERWLGTEPDEITAAADALRYFEPSHPSLVDLEVRLRRARQIKAMLFEILHPELASDDDEDWRRL*
Ga0126305_1089073413300010036Serpentine SoilMPKLDRTLAVGRASYQRWLGTEPDEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAEILHPQPMEENDEEWRQL*
Ga0126304_1027333013300010037Serpentine SoilVDRSLALGRATYERWLGTEPDEITAAADALRHFEPSHPSLVDLEVRLRRARQIKAMLFDILHPELASDDDEDWRRL*
Ga0126304_1048064013300010037Serpentine SoilMPKLHRSFALGRASYQRWLGTEPDEIAAAREVLRRFAPEHSCLLELEVRLCRARQIKGLLAEIRHPERMEESDEDWRRL*
Ga0126315_1099355213300010038Serpentine SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAMLAEILRPELATEDDEE
Ga0126309_1019948433300010039Serpentine SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKTMLGEILHPELATEDDEE*
Ga0126309_1048543723300010039Serpentine SoilMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAEILHPERMEENDEEWRRL*
Ga0126308_1008552213300010040Serpentine SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAMLAEILRPEL
Ga0126308_1034492313300010040Serpentine SoilMRGDPKACAPLQRLRRVSARTSELARLWQKASPDGKVRAVKKLDSSLALERATYERWLGTEPDEITAAADALRHFEPKHPSLVDLDVRLRRARQIKAMLADILHRELASDDDEDWRRL*
Ga0126308_1040080523300010040Serpentine SoilVDRSLALGRATYERWLGTEPDEITAAADALRHFEPSHPSLVDLEVRLRRARQIKAMLFDILHPDLASDDDEDWRRL*
Ga0126308_1082034313300010040Serpentine SoilMPKLDRSLAIGLANYQRWLGTEPEEITAAAEVLRRFAPEHPCLLELDVRLSRARQIKAMLAEILHPERMEENDEEWRRL*
Ga0126308_1088894113300010040Serpentine SoilMPKLDRSLAIGRANYQRWLGTEPEEIAAAAEVLRRFAPEHSCLLELEVRLCRARQIKAMLAEILQPERMEENDEEWRRL*
Ga0126312_1043983313300010041Serpentine SoilKGIARRKRCAVKKLDSSVALGRATYERWLGTEPDEITAAADALRHFEPKHPSLVDLEVRLRRARQIKAMLADILHRELASDDDEDWRRL*
Ga0126312_1059046623300010041Serpentine SoilMPKLDRSLAVGRASYQRWLGTEPEEIAAAAEVLRRFEPEHPCLLELEVRLCCARQIKAMLAKILQPERMEENDEEWRQL*
Ga0126312_1107355113300010041Serpentine SoilVPKLDSSLAIGRATYERWLGTEPDEIAAATEALRRFEPEHPSLVHLEVRFRRALQIKAMLAEILRPELASEDDEEWRRL*
Ga0126312_1124477413300010041Serpentine SoilMAGLWQKGIARRKRCAVKKLDSSVALGRASYERWLGTEPDEITAAADALRHFEPKHPSLVALEVRLRRARHINAMLADILH
Ga0126314_1015831433300010042Serpentine SoilMQKLDSSLALGRATYERWLGTEPAAIAAAAEALRRFEPEHPCLLELEVRLRRALQIKGILAEALHPGLGNEDEDWRRL*
Ga0126314_1067987513300010042Serpentine SoilMPKLDRSLAIGRASYQRWLGTEPEEIAAATEVLRRFAPEHPYLLELEVRLCRARRIKAMLAEILHPERMDENDEEWRQL*
Ga0126314_1076832723300010042Serpentine SoilMPKLDRTLAVGRASYQRWLGTEPDEIAATANVLRRFAPEHPCLLDLEVRLCRARQIKAMLAEILQPERIEENDEEWRRL*
Ga0126310_1002050413300010044Serpentine SoilVPKLDSSLAIGRATYERWLGTEPEDIAAAAEVLRRFAPEHPCLLELEVRLRRARQIKAMLAEILHPELASEDDEDWRRL*
Ga0126311_1042548013300010045Serpentine SoilMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRLAPEHPCLLELEVRLCRARQIKAMLAEILQPERMEENDEEWRRL*
Ga0126311_1050774513300010045Serpentine SoilMQKLDSSLALGRATYERWLGTEPAAIAAAAEALRRFEPEHPCLLELEVRLRRALQIKGILAQALHPGLGNEDEDWRRL*
Ga0126311_1053443123300010045Serpentine SoilVPKLDSSLAIGRATYERWLGTEPEDIAAAAELLRRFAPEHPCLLELEVRLRRARQIKAMLAEILHPELASEDDEDWRRL*
Ga0126311_1073547613300010045Serpentine SoilMPKLDRSLAIGRANYQRWLGTEPEEITAAAEVLRRFAPEHPCLLELEVRLCCARQIKAMLAKILQPERMEENDEEWRRL*
Ga0126306_1026487823300010166Serpentine SoilLWSLRDGKAFAVKKLDLSLVLGRAIYERWLGTEPDEIAAAADVLRHFEPNHPSLVDLDVRLRRARQIKAMLADILHTELASDDDEDWRRL*
Ga0126306_1068790313300010166Serpentine SoilVDRSLALGRATYERWLGTEPDEITAAADALRHFEPSHPSLVNLEVRLRRARQIKAMLFDILHPELASDDDEDWRRL*
Ga0126306_1075697313300010166Serpentine SoilKLNSSLAIGRATYERWLGTEPDEIAAAAEGLRRFEPEHPSLMHLKVRLRRALQIKAMLAEILYLELATDDDEDWRRL*
Ga0126306_1088407913300010166Serpentine SoilMQKLDSSLALGRATYERWLGTEPAAIAAAAEALRRFEPEHPCLLELEVRLRRALQIKGILAEVLHPELGNEDEDWRRL*
Ga0105239_1342891413300010375Corn RhizosphereMPKLERSLAIGRTSYQRWLGTEPEEIAASAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAGIL
Ga0134123_1315732213300010403Terrestrial SoilVSKLDNSLVIGRATFERWLGTEPVEIAAAAEALQKLEPEHPSLGDLEVRYRRALQIKAMLAEILHPELATEDDEDSEM
Ga0150985_10000060113300012212Avena Fatua RhizosphereVRKLDSSLALGRATYERWLGTEPNEIAAAAEALRDLQPEHPSIVELEVRLRRAHQIKAMLAEILHPEVAAEKDEDWRRL*
Ga0150985_10274084923300012212Avena Fatua RhizosphereWGMPKLDRSLAIGRASYQRWLGTEPDEIAVAAEMLRRFAPEHPCLLELEVRLCRARQIKAMLAGILHPERTEENDEEWRRL*
Ga0150985_10311347143300012212Avena Fatua RhizosphereMPKLDRSLAIGRASYQRWLGTEPDEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAEILHPERIEENDEEWRLL*
Ga0150985_10402876723300012212Avena Fatua RhizosphereAPFLSGQQEVDRSLALGRATYERWLGTEPDEITAAADALRRFEPSHPSLVDLEVRLRRARQIKAMLFDILHPELASDDDEDWRLL*
Ga0150985_10666040123300012212Avena Fatua RhizosphereGGAAVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRAWLIKAMLAEVLHSESAGERDEDWRRL*
Ga0150985_10666624823300012212Avena Fatua RhizosphereVDRSLALGRATYERWLGTEPDEITAAADALRHFEPNHPSLVDLEVRFRRARQIKAMLADIHPEVGERR*
Ga0150985_10727232833300012212Avena Fatua RhizosphereAVPKLDSSLALGRATYEGLLGTEPDEIAAAAEALRRFEPEHPSLAHLEVRFRRALQIKAMLAEILHPELAAEDDEDWRRL*
Ga0150985_10760096523300012212Avena Fatua RhizosphereYERWLGTEPAAIAAAAEALRRFEPEHPCLLELEVRLRRALQIKGILAEVLHPELGNEDEDWRRL*
Ga0150985_11076241313300012212Avena Fatua RhizosphereASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLGEILQPERMEENDEEWRRL*
Ga0150985_11176367313300012212Avena Fatua RhizosphereGLAETSPSYLSGGAAVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLGHLEVRFRQALQIKGMLAEILHPEVATEDDEDWRRL*
Ga0150985_11432380723300012212Avena Fatua RhizosphereAAVPKLDSSLVIGRATYERWLGTEPDEIAATAEALRRFEPEHPSLVHLEVRFRRALQIKAMLDEILHPELATEDDEEWRRL*
Ga0150985_11433055123300012212Avena Fatua RhizosphereAVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRYRQALQIKAMLAEILHPEVATEDDEK*
Ga0150985_11570020633300012212Avena Fatua RhizosphereKGSAPQKERWAMPKFDRSLAIGRASYQRWLGTEPEEIAAATEVLRRFAHEHPYLLELEVRLCRARRIKAMLAEILHPERMDENDEEWRQL*
Ga0150985_11688948123300012212Avena Fatua RhizosphereAMSKLDRSLAIGRASYQRWLGTEPDEIAAAAEVLRRIAPEHPCLLELEVRLCRARQIKAMLAEILSPELASDDDEDWRGL*
Ga0150985_11720081313300012212Avena Fatua RhizosphereVSKLDSSLVIGRATYERWLGTEPDEIADAAEALRQLEPEHPSLGELEVRFRRALQIKAMLAAILHPELASEDAEDWPR*
Ga0150985_11744271413300012212Avena Fatua RhizosphereCAVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRGLQIKAMLAEILNSELATEDDEEWRWL*
Ga0150985_11793422913300012212Avena Fatua RhizosphereMPKLDRSLAIGRANYQRWLGTEPDEIAAAAEVLRRFAPEHPCLLELDVRLCRARQIKAMLAEILHPERMEENDEEWRRL*
Ga0150985_11988872813300012212Avena Fatua RhizosphereIGVPIVAGGAAVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLAYLEVRFRRALHIKAMLAEILNPELATEDDEEWRRL*
Ga0150985_11990894813300012212Avena Fatua RhizosphereRASSTKGRWAMPKLDRSLAIGRASYQRWLGTEPDEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKSMLAEILQPERMENDEEWRRL*
Ga0150985_12047345113300012212Avena Fatua RhizosphereVPKLDSSLAIGRATYERWLGTEPDEIAAATEALRRFEPEHPSLVHLEVRYRRALQINAMLAVILHPELATEDDEDWRQL*
Ga0150985_12088084713300012212Avena Fatua RhizosphereASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRAGQIKAMLAEILQPERMEENDEEWRRL*
Ga0150985_12223831813300012212Avena Fatua RhizosphereLDSSLAIGRATYERLLGTEPDEIAAAAEALRRFEPEHPCLVDLEVRLRRALQIKAMLAEILSPELATEDDEDWRRL*
Ga0150984_10000577413300012469Avena Fatua RhizosphereKLDSSLALGRATYEGLLGTEPDEIAAAAEALRRFEPEHPSLAHLEVRFRRALQIKAMLAEILHPELAAEDDEDWRRL*
Ga0150984_10216690413300012469Avena Fatua RhizosphereAVWQKGLRPTKGRWAMPKLDRSLAIGRANYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELDVRLCRARQIKVMLAEILHPERMEENDEEWRQL*
Ga0150984_10256783313300012469Avena Fatua RhizosphereVAMPKLDRSLAIGRTSYQRWLGTEPEEIAASAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAGILHPERMEEWRRL*
Ga0150984_10268597243300012469Avena Fatua RhizosphereVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAMLDEILHPELATEDDEEWRRPSSTGN*
Ga0150984_10431437513300012469Avena Fatua RhizosphereKVRAVKKLDNSLALGRATYERWLGTEPDEITAAADALRHFEPKHPSLVDLEVRLRRARHIKAMLAHILHRELASDDDEDWRRL*
Ga0150984_10501598643300012469Avena Fatua RhizosphereRWAMPKLDRSLAIGRASYQRWLGTEPEEIAAATEVLRRFAPEHPYLLELEVRLCRARRIKAMLAEILHPERMDENDEEWRQL*
Ga0150984_10529429533300012469Avena Fatua RhizosphereYQRWLGTEPDEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLVEILHPEPMEENDEEWRRL*
Ga0150984_10705475423300012469Avena Fatua RhizosphereGRWAMPKLDRSLAIGRASYQRWLGTEPDEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKSMLAEILQPERMENDEEWRRL*
Ga0150984_10939739213300012469Avena Fatua RhizosphereDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLGEILQPERMEENDEEWRRL*
Ga0150984_10954495923300012469Avena Fatua RhizosphereVAGGAAVPKLDSSLALGRATYERWLGTEPDEIAAAAEALRRFEPEHPFLVDLEVRFRRAAQIKAMLAEILHLELAAKDDEDWRRL*
Ga0150984_11114116813300012469Avena Fatua RhizosphereIGRANYQRWLGTEPEEITAAAEVLRRFAPEHSCLLELEVRLCRARQIKGLLAEIRHPERMEESDEDWRRL*
Ga0150984_11397189913300012469Avena Fatua RhizosphereVSKLDSSLVIGRATYERWLGTEPDEIADAAEALRRLTPEHPSLAQLEVRFRRALQIKAMLAEILHPELATEDDEDWRRL*
Ga0150984_11638634633300012469Avena Fatua RhizosphereGTRTVSKLDSSLVIGRATYERWLGTEPAEIAAAAEAPRQLEPEHPSLGELEVRFRRALQIKAMLAEILSPELASDDDEDWRR*
Ga0150984_11823794523300012469Avena Fatua RhizosphereATYERWLGTEPDEITAATDALRHFEPNHPSLVDLEVRLRRARHIKAMLAHILHRELASDDDEDWRRL*
Ga0150984_11937146833300012469Avena Fatua RhizosphereAVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLAYLEVRFRRALHIKAMLAEILNPELATEDDEEWRRL*
Ga0150984_11976762043300012469Avena Fatua RhizosphereRCAVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAILAEILHPELATEDDEDWRRL*
Ga0150984_12147511123300012469Avena Fatua RhizosphereAETSASLQTGEVAVRKLDSSLALGRATYERWLGTEPNEIAAAAEALRDLQPEHPSIVELEVRLRRAHQIKAMLAEILHPEVAAEKDEDWRRL*
Ga0150984_12305024923300012469Avena Fatua RhizosphereGAMPKLDRSLAVGRASYQRWLGTEPDEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAEILHPERIEENDEEWRLL*
Ga0157285_1027404713300012897SoilMQKLDSSLALGRATYERWLGTEPAAITAAAEALRRLEPEHPCLLELEVRLRRALQIKGILAEALHPGLGNEDEDWRRL*
Ga0157291_1010075823300012902SoilMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFSPEHPCLLELEVRLCRARQIKAMLAEILHPERMEENDEEWRRL*
Ga0157302_1048821513300012915SoilMPKLDRSLAIGRTSYQRWLGTEPEEIAAAAEVLRRFEPEHPCLLELEVRLCRARQIKAMLAEILQPERMEENDEEWRRL*
Ga0164299_1045617813300012958SoilMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLGEILQPERMENDEEWRRL*
Ga0163162_1100783623300013306Switchgrass RhizosphereMPKLDRSLAIGRANYQRWLGTEPEEIAAAAEVLRRFEPEHPCLLELEVRLCRARQIKAMLAGILHPERMEEWRRL*
Ga0163162_1242371723300013306Switchgrass RhizosphereVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRLRRALQIKAMRAEILHPELAREDDEDWRRL*
Ga0157377_1120816313300014745Miscanthus RhizosphereMPKLDRSLAIGRASYQRWLGTEPDEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKSMLAEILQPERMEDNDEEWRRLYRPSR*
Ga0173478_1065008313300015201SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRYRRALQIKAMLAEILHPELATEDDEDWRRL*
Ga0190268_1057514223300018466SoilMQKLDSSLALGRATYERWLGTEPAAIAAAAEALRRFEPEHPCLLELEVRLRRALQIKGILAEVLHPELGNEDERRL
Ga0190270_1026656723300018469SoilMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLGLEVRLCRARQIKAMLAEILHPERIEENDEEWRRL
Ga0190270_1056128813300018469SoilMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAEILHPERMEEDDEEWRRL
Ga0190270_1102911223300018469SoilMQKLDSSLALGRATYERWLGTEPAAIAAAAEALRRFEPEHPCLLELEVRLRRALQIKGILAEALHPGLGNEDEGWRRL
Ga0190274_1325279413300018476SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAMLAEILRPELATEDDEEWRRL
Ga0190271_1081339533300018481SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALKIKAMLAELLHPELATEDDEEWRWP
Ga0190271_1209693623300018481SoilMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLGLEVRLCRARQIKAMLAEILHPERMEENDEEWRRL
Ga0173481_1055897323300019356SoilVPKLDSSLAIGRATYERWLGTEPDEIAAAAEALRHFEPEHPSLVHLEVRFRRALQIKAMLAEILRPELATEDDEEWRRL
Ga0207691_1073524623300025940Miscanthus RhizosphereMPKLDRSLAIGRTSYQRWLGTEPEEIAASAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAGILHPERMEEWRRL
Ga0207712_1138812513300025961Switchgrass RhizosphereMPKLDRSLAIGRANYQRWLGTEPDEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLAEILHPERMEENDEEWRRL
Ga0207708_1074009023300026075Corn, Switchgrass And Miscanthus RhizosphereMPKLDRSLAIGRANYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELDVRLCRARQIKAMLAQILQPERMEENDEEWRRL
Ga0209382_1147864723300027909Populus RhizosphereVSKLDSSLVIGRATFERWLGTEPDEIAAAAEALRRFEPEHPSLGDLEVRYRRALQIKAVLAEILHPELAAEDDEDWRRL
Ga0268266_1147277413300028379Switchgrass RhizosphereMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLCRARQIKAMLGEILQPERMEENDEEWRRL
Ga0307288_1042929213300028778SoilSAPARVWQKHRRLIVAGGAAVPKLDSSLALGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIRAMLAEILNPELATEDDEDWRRL
Ga0307314_1017547213300028872SoilMPKLDSSLAIGRATYERWLGTEPDEIAAATQALRRFEPEHPSLVHLEVRFRRALQIRAMLAEILNPELATEDDEDWRRL
Ga0308197_1046042813300031093SoilAVPKLDSSLALGRATYERWLGTEPNEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIRAMLAEILNPELATEDDEDWRRL
Ga0307405_1157185923300031731RhizosphereMPKLDRSLAIGRANYQRWLGTEPEEIAAATEVLRRFAPEHPYLLELEVRLCRARRIKAMLAEILHPERMDENDEEWRQL
Ga0310904_1019199333300031854SoilEVDRSLALGRATYERWLGTEPEEITAAADALRHFEPSHPSLVNLEVRLRRARQIKAMLFDILHPELASDDDEDWRRL
Ga0310900_1016516933300031908SoilMPKLDRSLAIGRASYQRWLGTEPEEIAAAAEVLRRFAPEHPCLLELEVRLSRARQIKAMLAEILHPERMEENDEEWRRL
Ga0307416_10085869823300032002RhizosphereVPKLDSSLALGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRYRRALQIKAMLAEILHPELASEDDEDWRRL
Ga0310906_1062306923300032013SoilGRATYERWLGTEPDEIAAAAEALRRFEPEHPSLVHLEVRFRRALQIKAMLAEILRPELATEDDEEWRRL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.