Metagenome / Metatranscriptome Family F056388

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056388
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	62 residues
Representative Sequence	MEFDPRTDRLPFHDPDEAEQARAGATMPSRDARIRHLQRVPLFSGFNEDELRRVAELSRIAEAPA
Number of Associated Samples	116
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.08 %
% of genes from short scaffolds (< 2000 bps)	92.70 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.321 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (12.409 % of family members)
Environment Ontology (ENVO)	Unclassified (24.088 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.956 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.18% β-sheet: 0.00% Coil/Unstructured: 68.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF13424	TPR_12	7.30
PF13532	2OG-FeII_Oxy_2	4.38
PF00005	ABC_tran	3.65
PF04392	ABC_sub_bind	2.92
PF13432	TPR_16	2.19
PF00072	Response_reg	1.46
PF02627	CMD	1.46
PF13847	Methyltransf_31	1.46
PF00491	Arginase	1.46
PF13176	TPR_7	0.73
PF00300	His_Phos_1	0.73
PF00296	Bac_luciferase	0.73
PF09720	Unstab_antitox	0.73
PF00692	dUTPase	0.73
PF07719	TPR_2	0.73
PF02518	HATPase_c	0.73
PF13531	SBP_bac_11	0.73
PF02335	Cytochrom_C552	0.73
PF01527	HTH_Tnp_1	0.73
PF07366	SnoaL	0.73
PF02515	CoA_transf_3	0.73
PF13490	zf-HC2	0.73
PF12773	DZR	0.73
PF06580	His_kinase	0.73
PF13414	TPR_11	0.73
PF00872	Transposase_mut	0.73
PF09335	SNARE_assoc	0.73
PF05199	GMC_oxred_C	0.73
PF00027	cNMP_binding	0.73
PF13793	Pribosyltran_N	0.73
PF07681	DoxX	0.73
PF12680	SnoaL_2	0.73
PF12399	BCA_ABC_TP_C	0.73
PF00496	SBP_bac_5	0.73
PF00120	Gln-synt_C	0.73
PF13191	AAA_16	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.92
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.46
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.46
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	1.46
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.73
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.73
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.73
COG3303	Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit	Inorganic ion transport and metabolism [P]	0.73
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.73
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.73
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.73
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.73
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.73
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.73
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.73
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.73
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.32 %
Unclassified	root	N/A	11.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.32 %
Unclassified	root	N/A	11.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.32 %
Unclassified	root	N/A	11.68 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	40.88 %
Unclassified	root	N/A	11.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	40.88 %
Unclassified	root	N/A	11.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	39.42 %
Unclassified	root	N/A	11.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.73 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	39.42 %
Unclassified	root	N/A	11.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.46 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.73 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.42 %
Unclassified	root	N/A	11.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.46 %
Syntrophobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae	0.73 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.42 %
Unclassified	root	N/A	11.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.46 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.73 %
Syntrophobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.42 %
Unclassified	root	N/A	11.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.46 %
unclassified Syntrophobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → unclassified Syntrophobacter	0.73 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.42 %
Unclassified	root	N/A	11.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.46 %
Syntrophobacter sp. SbD2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → unclassified Syntrophobacter → Syntrophobacter sp. SbD2	0.73 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10421541	Not Available	532	Open in IMG/M
3300000955\|JGI1027J12803_106264426	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300004019\|Ga0055439_10226050	Not Available	605	Open in IMG/M
3300004268\|Ga0066398_10070568	Not Available	754	Open in IMG/M
3300004643\|Ga0062591_100245862	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300005093\|Ga0062594_100296309	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300005332\|Ga0066388_105220625	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	659	Open in IMG/M
3300005338\|Ga0068868_100113862	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300005345\|Ga0070692_10787661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300005445\|Ga0070708_101798232	Not Available	569	Open in IMG/M
3300005458\|Ga0070681_11534144	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300005467\|Ga0070706_100473317	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300005467\|Ga0070706_101694680	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005468\|Ga0070707_100851815	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300005468\|Ga0070707_101154914	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005471\|Ga0070698_101642471	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005471\|Ga0070698_101729640	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005546\|Ga0070696_100658149	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005615\|Ga0070702_101873131	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300005764\|Ga0066903_101729233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1192	Open in IMG/M
3300006847\|Ga0075431_100359024	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300006852\|Ga0075433_11196524	Not Available	660	Open in IMG/M
3300006852\|Ga0075433_11244163	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300006903\|Ga0075426_11357851	Not Available	540	Open in IMG/M
3300006904\|Ga0075424_100046436	All Organisms → cellular organisms → Bacteria → Proteobacteria	4530	Open in IMG/M
3300006953\|Ga0074063_12054117	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300007255\|Ga0099791_10660769	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300009038\|Ga0099829_11083907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	664	Open in IMG/M
3300009038\|Ga0099829_11424449	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300009148\|Ga0105243_10430514	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300009171\|Ga0105101_10058193	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300010043\|Ga0126380_10707813	Not Available	811	Open in IMG/M
3300010046\|Ga0126384_10778240	All Organisms → cellular organisms → Bacteria → Proteobacteria	855	Open in IMG/M
3300010047\|Ga0126382_11969249	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300010048\|Ga0126373_10008016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8361	Open in IMG/M
3300010301\|Ga0134070_10400707	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300010358\|Ga0126370_10040936	All Organisms → cellular organisms → Bacteria	2877	Open in IMG/M
3300010358\|Ga0126370_11065190	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300010358\|Ga0126370_12341989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300010359\|Ga0126376_10352209	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1306	Open in IMG/M
3300010361\|Ga0126378_13371723	Not Available	507	Open in IMG/M
3300010391\|Ga0136847_12196815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300010398\|Ga0126383_11971555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophobacteraceae → Syntrophobacter → unclassified Syntrophobacter → Syntrophobacter sp. SbD2	672	Open in IMG/M
3300010398\|Ga0126383_12692411	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300011270\|Ga0137391_10470906	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300012209\|Ga0137379_10505489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1116	Open in IMG/M
3300012362\|Ga0137361_10058759	All Organisms → cellular organisms → Bacteria	3206	Open in IMG/M
3300012362\|Ga0137361_10658985	Not Available	958	Open in IMG/M
3300012532\|Ga0137373_10512665	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300012582\|Ga0137358_10290702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1110	Open in IMG/M
3300012685\|Ga0137397_10408683	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1011	Open in IMG/M
3300012900\|Ga0157292_10072041	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300012917\|Ga0137395_11123795	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300012922\|Ga0137394_10375070	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300012929\|Ga0137404_11996529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300012931\|Ga0153915_10017662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6963	Open in IMG/M
3300012939\|Ga0162650_100085549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300012948\|Ga0126375_10433042	Not Available	961	Open in IMG/M
3300012948\|Ga0126375_11851529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300012971\|Ga0126369_10453234	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1332	Open in IMG/M
3300012971\|Ga0126369_10643094	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300014318\|Ga0075351_1105740	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300014326\|Ga0157380_10409701	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300014881\|Ga0180094_1063210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	808	Open in IMG/M
3300015264\|Ga0137403_10088570	All Organisms → cellular organisms → Bacteria	3117	Open in IMG/M
3300016387\|Ga0182040_10393807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300017997\|Ga0184610_1326303	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300018000\|Ga0184604_10025215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300018000\|Ga0184604_10126571	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300018028\|Ga0184608_10422111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300018053\|Ga0184626_10077184	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1406	Open in IMG/M
3300018056\|Ga0184623_10058514	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1766	Open in IMG/M
3300018063\|Ga0184637_10342329	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	900	Open in IMG/M
3300018064\|Ga0187773_10582717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	681	Open in IMG/M
3300018076\|Ga0184609_10099692	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1304	Open in IMG/M
3300018076\|Ga0184609_10105775	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300018076\|Ga0184609_10165655	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300018082\|Ga0184639_10114877	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300018084\|Ga0184629_10524236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	613	Open in IMG/M
3300018429\|Ga0190272_13071403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300019269\|Ga0184644_1075500	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300019362\|Ga0173479_10631950	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300019458\|Ga0187892_10286706	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	827	Open in IMG/M
3300019877\|Ga0193722_1077267	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	821	Open in IMG/M
3300020003\|Ga0193739_1051029	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1064	Open in IMG/M
3300020004\|Ga0193755_1078228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300020070\|Ga0206356_11346925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300020170\|Ga0179594_10399955	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300020199\|Ga0179592_10402689	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300021073\|Ga0210378_10042528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1797	Open in IMG/M
3300021080\|Ga0210382_10308443	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300021170\|Ga0210400_11600995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300021560\|Ga0126371_12125636	Not Available	677	Open in IMG/M
3300021560\|Ga0126371_12583331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	615	Open in IMG/M
3300022534\|Ga0224452_1049795	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1243	Open in IMG/M
3300022756\|Ga0222622_10323945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300025315\|Ga0207697_10557879	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300025569\|Ga0210073_1014326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1540	Open in IMG/M
3300025908\|Ga0207643_10216024	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300025910\|Ga0207684_10439991	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300025910\|Ga0207684_11529207	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300025910\|Ga0207684_11594907	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300025912\|Ga0207707_11228047	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300025917\|Ga0207660_10001609	All Organisms → cellular organisms → Bacteria → Proteobacteria	15148	Open in IMG/M
3300025918\|Ga0207662_10648231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300025922\|Ga0207646_10729996	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300025971\|Ga0210102_1101968	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300026089\|Ga0207648_11550610	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300026118\|Ga0207675_101456705	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300026142\|Ga0207698_12639917	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300026361\|Ga0257176_1086844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300026371\|Ga0257179_1056475	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300026494\|Ga0257159_1097074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300026498\|Ga0257156_1038765	Not Available	972	Open in IMG/M
3300026557\|Ga0179587_10344321	Not Available	966	Open in IMG/M
3300027252\|Ga0209973_1049357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300027645\|Ga0209117_1122980	Not Available	693	Open in IMG/M
3300027952\|Ga0209889_1015149	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300028715\|Ga0307313_10098662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300029636\|Ga0222749_10120680	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1251	Open in IMG/M
3300030620\|Ga0302046_10220499	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1561	Open in IMG/M
3300031561\|Ga0318528_10405317	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300031720\|Ga0307469_10086092	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300031720\|Ga0307469_11654029	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300031793\|Ga0318548_10092814	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300031820\|Ga0307473_11484405	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300031847\|Ga0310907_10815452	Not Available	523	Open in IMG/M
3300031893\|Ga0318536_10132136	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300032075\|Ga0310890_10742306	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300032174\|Ga0307470_10456332	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	920	Open in IMG/M
3300032180\|Ga0307471_100987053	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300032180\|Ga0307471_102511134	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	652	Open in IMG/M
3300032180\|Ga0307471_104154080	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300032180\|Ga0307471_104203681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300032205\|Ga0307472_100268072	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300034090\|Ga0326723_0314966	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.78%
Host-Associated	Host-Associated	10.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.26%
Aquatic	Environmental → Aquatic	17.52%
Plants	Host-Associated → Plants	10.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.07%
Sediment	Environmental → Aquatic → Sediment	10.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.11%
Freshwater	Environmental → Aquatic → Freshwater	4.38%
Marine	Environmental → Aquatic → Marine	2.19%
Peat	Environmental → Terrestrial → Peat	0.73%
Cave	Environmental → Terrestrial → Cave	0.73%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.37%
Loam	Environmental → Terrestrial → Soil → Loam	17.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.46%
Lake	Environmental → Aquatic → Freshwater → Lake	0.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.73%
Sand	Environmental → Terrestrial → Soil → Sand	0.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.73%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.19%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.19%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.19%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.73%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.73%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.73%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.73%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.73%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_104215412	3300000550	Soil	MEIDPSTDRLPFQDPDEPEQVRAGAIELSPDAQRRHLQRVPLFSGFNE
JGI1027J12803_1062644261	3300000955	Soil	MELDPRSADRLPFHDAEEVEEAHAGEIVPARDAQRRHLQRVPLFSGFDEDELGRVAEISKIVE
Ga0055439_102260502	3300004019	Natural And Restored Wetlands	MDFDPRTDRLPFTDPDEAGQARAGETESSSDARIRHLQRVPLFSGFNEDELRRVAELSRIVDLPA
Ga0066398_100705682	3300004268	Tropical Forest Soil	MELDPRTDSSPFNESDEAEQAPAGATEPSRDVRIRHLQRVPLFSGFNEKELRRVAELARIVD
Ga0062591_1002458621	3300004643	Soil	MEIDPRTDRLPFNDPDEPEPGYAGATEPSADARIRHLQRVPLFSGFNENELHRIA
Ga0062594_1002963091	3300005093	Soil	MEFNQRFTDRLPFHDPDEAEQAHPGVPASSRDARIGHLERVPLFTGFNEDELRRIVELSRIVESPTGTVI
Ga0066388_1052206253	3300005332	Tropical Forest Soil	MAFDPRTDRLPFSDLDAGAQVTEPSHDARIRHLQRLPLFSGFTETELRR
Ga0068868_1001138624	3300005338	Miscanthus Rhizosphere	MELDPRSVDRVPPFHDPVEVEPPAFPGAAEPAGDAQLRHLQRVPLFTGFNENELRRVAGLSRIVDVS
Ga0070692_107876611	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDQKIDRLPFQDPDAAEQVRPDETAPSHDARIRHLQRVPLFTGFNEDELRRVAELARIVETPAGTVVTQI
Ga0070708_1017982322	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEIDPRTADRLPFHDVDEGQQAYAGATEPARDVHLRHLQRVPLFSGFNEDE
Ga0070681_115341442	3300005458	Corn Rhizosphere	MEIDPRMRLPFHDPAEAEPSYAGAAEPSGDAQLRHLQRVPLFSGFNEDE
Ga0070706_1004733172	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDPRTDRLPFNEPAEEAPAGAAELSNDARIRHLQRVPLFSGFREKELRRVAEL
Ga0070706_1016946802	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDERFTDRLPFHDPDETEQAHAGSTASSGDARIGHLQRVPLFSGFNEDELRRV
Ga0070707_1008518151	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDPRTDRLPFHDPDEAEQARAGATMPSRDARIRHLQRVPLFSGFNEDELRRVAELSRIAEAPA
Ga0070707_1011549142	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDPRSPDRLPFHDPDEAEQAHAGATEPSRDAQRRHLQRVPLFSGFNEDELRRVAELSRIVEAPVGTVITQIGDAGDSIVLSRQKGRRPP*
Ga0070698_1016424712	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDPRSIDRLPFHDPDEAELAHARGTASARDAPIRHLQRVPLFSGFNEDELRRVAELSRIVE
Ga0070698_1017296401	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MEFNQRFTDRLPFHDPDEAEQAHPGVPASSRDARIGHLERVPLFTGFNEDELRRIVELS
Ga0070699_1020510351	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDQRFTDRLPFHDPDETEQVHDGAPASSRDPRIGHLERVPLFSGFTEDELRRVA
Ga0070696_1006581492	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDPRTDRLPFNEPADDPAAGGAELSSDARIRHLQRVPLFSGFSGKELRRVAELARIADVPAGS
Ga0070702_1018731311	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MELDPRTDRLAFNHPDEAEQAHAGATVPSHDARIRHLQRVPLFSGFNEDELRRVAELSRIAEI
Ga0066903_1017292331	3300005764	Tropical Forest Soil	MAFDPRTDRLPFSDLDAGAQVTEPSHDARIRHLQRLPLFSGFTETELRRVADLSRIAEVA
Ga0075431_1003590245	3300006847	Populus Rhizosphere	MEIDPRIRLPFHDPDEAEPSYAGTAEPSGDAQLRHLQRVPLFSGFNEDE
Ga0075433_111965241	3300006852	Populus Rhizosphere	MEIDPRTADRLPFHEIDEGQQPYAGATEPAHDVHLRHLQRVPLFSGFNEDELRRI
Ga0075433_112441631	3300006852	Populus Rhizosphere	MDLDPRTDRVPFNDPDEAEQARAGATEPSHDARIRHLQRVPLFSGFNEGELRRVAELSRIAE
Ga0075426_113578512	3300006903	Populus Rhizosphere	MGEAEEVTMEIDPRTADRLPFHDVDEGQQAYAGATEPARDVHLRHLQRVPLFSGFNEDELRRIAELS
Ga0075424_1000464365	3300006904	Populus Rhizosphere	MDFDARSADRLPFHDDDEVTPAPDPISSDARIRHLQRVPLFSGFSEDELRRIVDRSRIVEVA
Ga0074063_120541171	3300006953	Soil	MEFDQRITDRLPFHDPDEAEQALAGATASSRDPRIGHLERVPLFSGFSEDELRRVAELSRIVESPAGTIITQIG
Ga0099791_106607691	3300007255	Vadose Zone Soil	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEGEL
Ga0099829_110839072	3300009038	Vadose Zone Soil	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEDELRRVAEHSRILDAPAGTVITQ
Ga0099829_114244491	3300009038	Vadose Zone Soil	MEFDPRSTDRLPFHDPDEAEQAHAGATAPSRDAQRRHLQRVPLFSGFSENELRRVAELSRIVEAPVGTVITQI
Ga0105243_104305141	3300009148	Miscanthus Rhizosphere	MEFDQRSTDRLPFHDPDEAGQAHAGVTASSRDAQIGHLQRVPLFSGFNEDELRRVAELSRIVEAPA
Ga0105101_100581933	3300009171	Freshwater Sediment	MEIDPRIRLPFHDPDEVEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEDELRRVAEHS
Ga0126380_107078131	3300010043	Tropical Forest Soil	MELDPRTDSSPFNESDEAEQAPAGATEPSRDVRIRHLQRVPLFSGFNDKELRRV
Ga0126384_107782401	3300010046	Tropical Forest Soil	MDFDPRTDRLSFNDPDEAEQARARATVPSHDARILHSQRVPLFSGFNENELRRVAELSRIAEAPAGTVVTQMGEPGDSFF
Ga0126382_119692491	3300010047	Tropical Forest Soil	MEFDPRNDRLPFNESDEAEQAPAGATEPSGDARIRHLQRVPLFSGFNEKELRRVAEL
Ga0126373_100080169	3300010048	Tropical Forest Soil	MEFDRQNDRLPFNESDEEEAGRAGTTESSSDARIRHLQRVPLFSGFNEVELRRIAELSRIVDIPAGTAVT*
Ga0134070_104007072	3300010301	Grasslands Soil	MEFDHRSIDRLPFHDPDEAEHAHAGATASARDAKLRHLQRVPLFSGFGEDELRRVA
Ga0126370_100409361	3300010358	Tropical Forest Soil	MDFDPRTDRLSFNDPDEAEQARARAVPSHDTRVLHLQRVPLFSGFNENELRRVAELSRIAEAPA
Ga0126370_110651902	3300010358	Tropical Forest Soil	MEFDQPLTDRLPFHDPDETDPAHAGASAPSRDARIRHLQRVPLFSGFEESDLRKVAEKTRIVEAPAGTVITHIGEPG
Ga0126370_123419891	3300010358	Tropical Forest Soil	MDLDPRTDRLSFNDPDEAEQARARAPVPSHDARILHLQRVPLFSGFNEDELRRVAELSRIAEAPAGTVVTQMGEPG
Ga0126376_103522092	3300010359	Tropical Forest Soil	MEIDPRTADRLPFHDPNEADETYAGAAEPAADAQLRHLQRVPLFSGFN
Ga0126378_133717231	3300010361	Tropical Forest Soil	MDFDPRTDPLLFDDPDEGATAPSRDARALHLQRVPLFGGLNEDELGRVAELSRIAEVPAGTVVTQTGEPGD
Ga0136847_121968151	3300010391	Freshwater Sediment	MEFDPRTDRLPFNDPDEAEQARAGATAPSHDARIRHLQRVPLFSGFNEDELRRVAELSRIAEAAAGTV
Ga0126383_119715553	3300010398	Tropical Forest Soil	MEMDPQSTNRLPFHDPSELEPARGGAGVSSRDARVQHLERVPLFSGFTEGELRRVAELS
Ga0126383_126924111	3300010398	Tropical Forest Soil	MDLDPRTDRLSFNDPDEEEQARARATVPSHDARILHLQRVPLFSGFNENELRRVAEL
Ga0137391_104709063	3300011270	Vadose Zone Soil	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEDELRRVAEH
Ga0137379_105054891	3300012209	Vadose Zone Soil	MDFDPRTDRVPLNDPDEAEQAHAGETVPSHDARIRHLQRVPLFSGFNEDELRRVAELSRIAEAP
Ga0137361_100587596	3300012362	Vadose Zone Soil	MEIDPRTTDRLPFHDPHEAEQAYAGAAEPSGDAQLRHLQRVPLFSGFSEGELRRVAD
Ga0137361_106589852	3300012362	Vadose Zone Soil	VEIDPRITDRLPFHDPDEAEQAYAGAAEPSGDAQLRHLQRVPLFSGFSEGELRRVAD
Ga0137373_105126652	3300012532	Vadose Zone Soil	MDFDPRTDRVPFNDPDEAEQARADATGPSHDARIRHLQRVPLFSGFNEDELRRVAELSR
Ga0137358_102907023	3300012582	Vadose Zone Soil	MECDQQTERLPFHDPDEAEQGRAGATVPSGDGRIRHLQRVPLFSGFNEAELRRVVELSRIVEAPAGTVVT
Ga0137397_104086832	3300012685	Vadose Zone Soil	MEFDPETDRTPFTDPDESSHDARIRHLQRVPLFGGFNEDELRRVAELSRIAEVAAGTVVTQIGEPGD
Ga0157292_100720412	3300012900	Soil	MELDPRSAERLPFHDADEAAGAHAGEIVPARDAQTRHLQRVPLFSGFDEDELGRVAEISTIVEAP
Ga0137395_111237951	3300012917	Vadose Zone Soil	MEIDPRTADRLPFHDPEPAEPAYVGAAEPSSDARLRHLQRVPLFSGFSEDELRRVAELSR
Ga0137394_103750701	3300012922	Vadose Zone Soil	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAHLRHLQRVPLFTGFNEDELRRVAEHSRILEAPAGTVITQIGDAGDS
Ga0137404_119965292	3300012929	Vadose Zone Soil	MEFDPRSDRLPFHGPDEAEQAHAGATASSSDAPIRHLQRVPLFSGFNEDELRRVA
Ga0153915_100176627	3300012931	Freshwater Wetlands	MEFDPRTDRLPFNEPAEPAPAGATEPSHDARIRHLQRVPLFSGFSEKELRRIAELSRIVD
Ga0162650_1000855491	3300012939	Soil	MEFDQKIDRLPFQDPDAAEQVRPDETAPSHDARIRHLQRVPLFTGFNEDELRRVAELARIVETPAGTVVTQ
Ga0126375_104330422	3300012948	Tropical Forest Soil	MDFDPRTDPLLFDDPDEGATAPSRDARALHLQRVPLFSGLNEDELGRVAELSRIAEVPAGTVVTQTGEP
Ga0126375_118515292	3300012948	Tropical Forest Soil	MAFDPRTDRLPFSDLDESKDTLAGAPEMSDDARIRHLQRVPLFSGFNED
Ga0126369_104532343	3300012971	Tropical Forest Soil	MEFDRQNDRLPFNESDEEEVGRAGTTESSSDARIRHLQRVPLFSGFNEVELRRIAELSRIVDIPAGTAVT*
Ga0126369_106430942	3300012971	Tropical Forest Soil	MEFDQPLTDRLPFHDPDETDPAHAGASAPSRDARIRHLQRVPLFSGFEESDLRKVAEKTRIVE
Ga0075351_11057401	3300014318	Natural And Restored Wetlands	MEFDQHADRLPFHDPDEIEQARADATVPSHDARIRHLQRVPLFSGFNEDELRRVAELSRIVEAP
Ga0157380_104097011	3300014326	Switchgrass Rhizosphere	MELDPRSVDRVPPFHDPVEVEPPAFPGATEPAGDAQLRHLQRVPLFTGFNENELRRVAGLSRIVDVSAGTVITQIGDAG
Ga0180094_10632101	3300014881	Soil	MEIDPRIRLPFHDPDETEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEDELRRVAEHSRI
Ga0137403_100885706	3300015264	Vadose Zone Soil	MEFDPRSDRLPFHGPDEAEQAHAGATASSSDAPIRHLQRVPLFSGFNEDELRRVAELSRIVEAPVGTVITQ
Ga0182040_103938073	3300016387	Soil	MEFDRQNDRLPFNESDEEEAGRAGTTESSSDARIRHLQRVPLFSGFNEVELRRIAELSRIVD
Ga0184610_13263032	3300017997	Groundwater Sediment	VEIDPRIRLPFHDPDEAEESYAGAAEPSGDAQLRHLQRVPLFSGFNEDELCRVAELSRIVDASAGTVITQ
Ga0184604_100252151	3300018000	Groundwater Sediment	MEIDPRIRLPFHDPDEAEESYASAAEPSGDAQLRHLQRVALFSGFNDDELRRVAEHSR
Ga0184604_101265712	3300018000	Groundwater Sediment	MEFDQRFTDRLPFHDPDEAEESYAGAAEPSGDAQLRHLQRVALFSGFNDDELRRVAEHSR
Ga0184608_104221111	3300018028	Groundwater Sediment	MEIDPRIRLPFHDPDEAEQSYAGTTEPSGDAQLRHLQRVPLFSGFNEDELRRVAELSR
Ga0184626_100771841	3300018053	Groundwater Sediment	MEIDPRIRLPFHDPDEVEQAYAGAAEPSGDAQLRHLQRVPLFSGFNEDELR
Ga0184623_100585141	3300018056	Groundwater Sediment	MEIDPRIRLPFHDPDEAEQPYAGAAEPSGDAQLRHLQRVPLFSGFNEDELRRVAEHSRIV
Ga0184637_103423291	3300018063	Groundwater Sediment	MEFDPRTDRLPFHDPDEAEQACVDATAPSHDARIRHLQRVPLFSGFNEDELRRVAELSRIVEAP
Ga0187773_105827172	3300018064	Tropical Peatland	MEFDRLADRLPFHDPGEGEEAHAGAAEPSRDARIRHLQRVPLFSGFDEDELRRVVDLARIVEAPAG
Ga0184609_100996921	3300018076	Groundwater Sediment	MELDPRTDRLPFHDPDEAGQARADATAPSHDARIRHLQRVPLFSGFNEDELRRVAELSRIVE
Ga0184609_101057751	3300018076	Groundwater Sediment	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEDELRRVAEHSRIL
Ga0184609_101656552	3300018076	Groundwater Sediment	MEIDPRIRLPFHDPDEAEQSYAGTTEPSGDAQLRHLQRVPLFSGFNEDELRRVAEHSRIVDAPAGTVIT
Ga0184639_101148771	3300018082	Groundwater Sediment	MGFDPRTDRSPFNNPDEAEQARAEEAEPSHDARIRHLERVPLFSGLNEDELRRVAELSRIAEAPAGTAITQIGEP
Ga0184629_105242362	3300018084	Groundwater Sediment	MEFNPRTGHSPFNDPDEAEQARAEVAEPSHDARIRHLERVPLFSGLNEDELRRVAELSRIAEAPAGTAITQIGEP
Ga0190272_130714031	3300018429	Soil	MEIDPRIRLPFHDPDEVEEAYAGAAEPSGDAQLRHLQRVPLFSGFN
Ga0184644_10755001	3300019269	Groundwater Sediment	MEIDPRIRLPFHDPDEAEQSYAGTTEPSGDAQLRHLQRVPLFSGFNEDELRRVAEHSRIVDAPAGTVITQIG
Ga0173479_106319502	3300019362	Soil	MEFNQRFTDRLPFHDPDEAEQAHPGVPASSRDARIGHLERVPLFTGFNEDELRRIVELSRIVESPTG
Ga0187892_102867061	3300019458	Bio-Ooze	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFTGFNEDELRRV
Ga0193722_10772672	3300019877	Soil	MEFDPRTDRLPFNEPDEAESARAGVTEPSHDARIRHLQRVPLFSGFSEKELRRIAELSR
Ga0193739_10510292	3300020003	Soil	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEDELHRVAEHS
Ga0193755_10782282	3300020004	Soil	MEIDPRIRLPFHDPDEAEQAYVGAAEPSGDAQLRHLQRVPLFSGFNEEELRRVA
Ga0206356_113469252	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MELDPRSVDRVPPFHDPVEVEPPAFPGATEPAGDAQLRHLQRVPLFTGFNENE
Ga0179594_103999552	3300020170	Vadose Zone Soil	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEGELRRVAEHSRIVDAPAGTVITQIGD
Ga0179592_104026891	3300020199	Vadose Zone Soil	MEIDPRTAERLPFHEADEGQQAYAGATEPARDVHLRHLQRVPLFSGFNEDELRRIAELSRIRETAAGTVVTQIGDAGDS
Ga0210378_100425281	3300021073	Groundwater Sediment	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEDELRRVAE
Ga0210382_103084431	3300021080	Groundwater Sediment	MEIDPRIRLPFHDPDEAEESYAGAAEPSGDAQLRHLQRVPLFSGFNEAELRRVAEHSRILDAP
Ga0210400_116009952	3300021170	Soil	MEFDPRSTDRLPFHDPDEAEQASAGATEPSRDPKRRHLQRVPLFSGFNEDELRRVAELSRVVEA
Ga0126371_121256361	3300021560	Tropical Forest Soil	MDFDPRTDPLLFDDSDEGATAPSRDARALHLQRVPLFSGLNEDELGRV
Ga0126371_125833312	3300021560	Tropical Forest Soil	MEFDRRNDRLPFNESDEVEAGRAGATESSSDARIRHLQRVPLFSGFNEVELRRIAELS
Ga0224452_10497952	3300022534	Groundwater Sediment	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEDELRRVAEHSRILDAP
Ga0222622_103239451	3300022756	Groundwater Sediment	MEIDPRIRLPFHDPDEAEPPYAGAAEPSGDAQLRHLQRVALFSGFNDDELRRVAEHSRIL
Ga0207697_105578791	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MELDPRSVDRVPPFHDPVEVEPPAFPGAAEPAGDAQLRHLQRVPLFTGFN
Ga0210073_10143261	3300025569	Natural And Restored Wetlands	MEFDRQTDRLPFHDPDEAEQGRADATIPSHDARIRHLQRVPLFTGFNEDELRRVAELSRIVEAPVGTAVTQIG
Ga0207643_102160243	3300025908	Miscanthus Rhizosphere	MEIDPRTDRLPFNDPDEPEPGYAGATEPSADARIRHLQRVPLFSGFNENELHRIAELSRIDEAPAGAVVTQIGEPGNSF
Ga0207684_104399911	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDPRTDRLPFNDPDEAEQARAAAAAPSHDARIRHLQRVPLFSGFNEDELRRVAELSRIAEA
Ga0207684_115292071	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEIDPRTADRLPFHDPDEAEQAYSGAAELSSDGQLRHLQRVPLFSGFSEDELRRVASCRGSSSPQR
Ga0207684_115949072	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQFDPRSTDRLPFHDPDEAEQVSAGGTEPSRDPKRRHLQRVPLFSGFNEDELRRVAELSRVV
Ga0207707_112280472	3300025912	Corn Rhizosphere	MEIDPRMRLPFHDPAEAEPSYAGAAEPSGDAQLRHLQRVPLFSGFNEDEL
Ga0207660_1000160920	3300025917	Corn Rhizosphere	MELDPRSVDRVPPFHDPVEVEPPAFPGATEPAGDAQLRHLQRVPLFTGFNENELRRVAGLSRIVDVSAGT
Ga0207662_106482312	3300025918	Switchgrass Rhizosphere	MELDPRSVDRVPPFHDPVEVEPPAFPGAAEPAGDAQLRHLQRVPLFTGFNENELRRVAGLSRIVDVSA
Ga0207646_107299963	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEFDPRTDRLPFHDPDEAEQARAGATMPSRDARIRHLQRVPLFSGFNEDELRRVAELSRIAEAPAG
Ga0210102_11019681	3300025971	Natural And Restored Wetlands	MELGQPSDRLPFHDPDEAEHPFAGAMESSGDVRIRHLRRVPLFSGFDDDELRRVVDLARIVEAPAGTVVTQI
Ga0207648_115506102	3300026089	Miscanthus Rhizosphere	MEFDQRSTDRLPFHDPDEAGQAHAGVTASSRDAQIGHLQRVPLFSGFNEDELRRVAELSR
Ga0207675_1014567051	3300026118	Switchgrass Rhizosphere	MEFDQRFSDRLPFHDPDEAEQAHLAAPASSRDPRIGHLERVPLFSGFTEDELRRVAELSRIVESPTGTV
Ga0207698_126399171	3300026142	Corn Rhizosphere	MELDPRTDRLPFNESDEAEQAPAGATEPSGDARIRHLQRVPLFSGFNEKELRRVAELARIVD
Ga0257176_10868442	3300026361	Soil	MEFDPRTDRLPFNDPDEAEPARAGATESSSDARIRHLQRVPLFSGFNEDELRRIAELS
Ga0257179_10564751	3300026371	Soil	MEIDPRTTDRLPFHDPHEAEQAYAGAAEPSGDAQLRHLQRVPLFSGFSEGELRRVAELSRIIES
Ga0257159_10970742	3300026494	Soil	VEIDPRITDRLPFHDPDEAEQAYTGAAKPSSDAQLRHLQRVPLFSGFSEDELRRVAEL
Ga0257156_10387651	3300026498	Soil	VEIDPRITDRLPFHDPDEAEQAYTGAAKPSSDAQLRHLQRVPLFSGFSEDELRRVAELSRISEAPA
Ga0179587_103443212	3300026557	Vadose Zone Soil	MEIDPRTAERLPFHEADEGQQAYAGATEPARDVHLRHLQRVPLFSGFNEDELRRIAELSRIRETAAGTV
Ga0209973_10493571	3300027252	Arabidopsis Thaliana Rhizosphere	MELDPRSAERLPFHDADEAAGAHAGEIVPARDAQTRHLQRVPLFSGFDEDELGRVAEISKIVEAPEGAEIGDYDE
Ga0209117_11229802	3300027645	Forest Soil	MEIDPRTAERLPFHEADEGQQAYAGATEPARDVHLRHLQRVPLFSGFNEDELRRI
Ga0209889_10151491	3300027952	Groundwater Sand	MELDPRSTDRLPFHDPDEAEQAHAGATEPSRDAQRRHLQRVPLFSGFDEGELRRIADLSR
Ga0307313_100986621	3300028715	Soil	MEIDPRIRLPFHDPDEAEQSYAGAAEPSGDAQLRHLQRVPLFSGFNEDELRRVAEHSRIVDAPAGA
Ga0222749_101206801	3300029636	Soil	MEFDQQTDRLPFHDPDEAEQARVDATPSRDARIRHLQRVPLFSGFNEDELRRVVELARIAEVPAGTVVTQI
Ga0302046_102204991	3300030620	Soil	MEIDPRIRLPFHDPDEAEQSYAGAAEPFGDAQLRHLQRVPLFSGFNED
Ga0318528_104053172	3300031561	Soil	MEFDRQNDRLPFNESDEEEAGRAGTTESSSDARIRHLQRVPLFSGFNEVELRRIAELSRI
Ga0307469_100860921	3300031720	Hardwood Forest Soil	MEFDPRTDRLPFNEPAEQAPAGAAELSNDARIRHLQRVPLFSGFREKELRRVAEL
Ga0307469_116540291	3300031720	Hardwood Forest Soil	MDFDPRTDRPHFNDSDEAAQASAGATVLSHDARIRHLQRVPLFSGFNEDELRRVAELSRI
Ga0318548_100928141	3300031793	Soil	MEFDRQNDRLPFNESDEEEAGRAGTTESSSDARIRHLQRVPLFSGFNEVELRRIAELSRIVDIPA
Ga0307473_114844051	3300031820	Hardwood Forest Soil	MQFDPRSTDRLPFHDPDEAEQVSAGGTEPSRDPKRRHLQRVPLFSGFNEDELRRVAELSRVVEAPV
Ga0310907_108154521	3300031847	Soil	MELDPRSVDRVPPFHDPVEVEPPAFPGAAEPAGDAQLRHLQRVPLFTGF
Ga0318536_101321361	3300031893	Soil	MEFDRQNDRLPFNESDEEEAGRAGTTESSSDARIRHLQRVPLFSGFNEVELRRIAELSRIVDIPAGT
Ga0310890_107423061	3300032075	Soil	MELDPRSVDRVPPFHDPVEVEPPAFPGAAEPAGDAQLRHLQRVPLFTGFNENELRRVA
Ga0307470_104563321	3300032174	Hardwood Forest Soil	MEFDPRTDRLPVNEPAEQAPAGAAELSNDARIRHPQRVPLFSGFREKELRRVAELARIVDVPAGTAVTQIGEPGDS
Ga0307471_1009870531	3300032180	Hardwood Forest Soil	MEFDQQTDRLPFHDPDEAEQAGVDATPSRDARIRHLQRVPLFSGFNEDELRRVVELARIAEVP
Ga0307471_1025111341	3300032180	Hardwood Forest Soil	MEFDQKIDRLPFQDPDAAEQVRPDETVPSHDARIRHLQRVPLFTGFNEDELRRVAELSRIVETPAG
Ga0307471_1041540802	3300032180	Hardwood Forest Soil	MQFDPRSTDRLPFHDPDEAEQVSAGGTEPSRDPKRRHLQRVPLFSGFNEDELRRVAELSR
Ga0307471_1042036811	3300032180	Hardwood Forest Soil	MEFDPQTDRLRFNDSDEAELARAGATAPSHDARIRHLQRVPLFSGFNEDELRRVAELSRIAEA
Ga0307472_1002680722	3300032205	Hardwood Forest Soil	MEFDPRSTDRLPFHDPDEAEQASAGATEPSRDPKRRHLQRVPLFSGFNEDELRRVADLS
Ga0326723_0314966_533_703	3300034090	Peat Soil	MEFDPRTDRLPFNEPDEAEPARAGVTEPSHDARIRHLQRVPLFSGFSEKELRRIAEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056388

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences