Metagenome / Metatranscriptome Family F056382

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056382
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	73 residues
Representative Sequence	IVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL
Number of Associated Samples	114
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.36 %
% of genes near scaffold ends (potentially truncated)	75.91 %
% of genes from short scaffolds (< 2000 bps)	75.91 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (95.620 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.496 % of family members)
Environment Ontology (ENVO)	Unclassified (37.226 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.336 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.89% β-sheet: 14.89% Coil/Unstructured: 70.21%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF07704	PSK_trans_fac	2.92
PF08818	DUF1801	2.19
PF14329	DUF4386	2.19
PF02852	Pyr_redox_dim	1.46
PF05163	DinB	1.46
PF13378	MR_MLE_C	1.46
PF09285	Elong-fact-P_C	1.46
PF00561	Abhydrolase_1	1.46
PF12760	Zn_Tnp_IS1595	0.73
PF00528	BPD_transp_1	0.73
PF13683	rve_3	0.73
PF01632	Ribosomal_L35p	0.73
PF02321	OEP	0.73
PF13428	TPR_14	0.73
PF00076	RRM_1	0.73
PF01202	SKI	0.73
PF00144	Beta-lactamase	0.73
PF04613	LpxD	0.73
PF01872	RibD_C	0.73
PF00069	Pkinase	0.73
PF07730	HisKA_3	0.73
PF00291	PALP	0.73
PF00857	Isochorismatase	0.73
PF04014	MazE_antitoxin	0.73
PF13193	AMP-binding_C	0.73
PF00782	DSPc	0.73
PF13537	GATase_7	0.73
PF01425	Amidase	0.73
PF00899	ThiF	0.73
PF06441	EHN	0.73
PF00873	ACR_tran	0.73
PF11008	DUF2846	0.73
PF00581	Rhodanese	0.73
PF00534	Glycos_transf_1	0.73
PF00850	Hist_deacetyl	0.73
PF13439	Glyco_transf_4	0.73
PF00903	Glyoxalase	0.73
PF14237	GYF_2	0.73
PF00383	dCMP_cyt_deam_1	0.73
PF08031	BBE	0.73
PF13305	TetR_C_33	0.73
PF03544	TonB_C	0.73
PF02371	Transposase_20	0.73
PF13360	PQQ_2	0.73
PF14559	TPR_19	0.73
PF12686	DUF3800	0.73
PF08327	AHSA1	0.73
PF04264	YceI	0.73
PF01565	FAD_binding_4	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.92
COG4423	Uncharacterized conserved protein	Function unknown [S]	2.92
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	2.19
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	2.19
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	2.19
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.46
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.46
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.46
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.73
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.73
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.73
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.73
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.73
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.73
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.73
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.73
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.73
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.73
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.73
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.73
COG0291	Ribosomal protein L35	Translation, ribosomal structure and biogenesis [J]	0.73
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.73
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.73
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.35 %
Unclassified	root	N/A	3.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.62 %
Unclassified	root	N/A	3.65 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.91 %
Unclassified	root	N/A	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.92 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.03 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.03 %
Unclassified	root	N/A	3.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.19 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.57 %
Unclassified	root	N/A	3.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.19 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.73 %
unclassified Thaumarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota	0.73 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.57 %
Unclassified	root	N/A	3.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.19 %
Thaumarchaeota archaeon 13_1_40CM_4_48_7	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	0.73 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.73 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Unclassified	root	N/A	3.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.19 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.46 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.73 %
Thaumarchaeota archaeon 13_1_40CM_4_48_7	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	0.73 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Unclassified	root	N/A	3.65 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.46 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.73 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.73 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.73 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.73 %
Thaumarchaeota archaeon 13_1_40CM_4_48_7	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	0.73 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.03 %
Unclassified	root	N/A	3.65 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.46 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.73 %
Granulicella sp. L46	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	0.73 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.73 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.73 %
Thaumarchaeota archaeon 13_1_40CM_4_48_7	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	0.73 %
Spongiibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02IFYTF	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
2199352024\|deeps_contig89399.53032	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300001137\|JGI12637J13337_1021465	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300002245\|JGIcombinedJ26739_100020815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	5643	Open in IMG/M
3300002561\|JGI25384J37096_10233004	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300005167\|Ga0066672_10553434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300005172\|Ga0066683_10212805	All Organisms → cellular organisms → Bacteria → Acidobacteria	1194	Open in IMG/M
3300005174\|Ga0066680_10217104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300005178\|Ga0066688_10457583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	825	Open in IMG/M
3300005178\|Ga0066688_10821870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300005181\|Ga0066678_10900298	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300005445\|Ga0070708_100245686	All Organisms → cellular organisms → Bacteria → Acidobacteria	1681	Open in IMG/M
3300005445\|Ga0070708_100890895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300005447\|Ga0066689_10042947	All Organisms → cellular organisms → Bacteria → Acidobacteria	2384	Open in IMG/M
3300005447\|Ga0066689_10089271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1746	Open in IMG/M
3300005468\|Ga0070707_100042269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4363	Open in IMG/M
3300005471\|Ga0070698_100412581	All Organisms → cellular organisms → Bacteria → Acidobacteria	1284	Open in IMG/M
3300005552\|Ga0066701_10309307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	980	Open in IMG/M
3300005553\|Ga0066695_10500404	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300005556\|Ga0066707_10139762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1527	Open in IMG/M
3300005556\|Ga0066707_10863177	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300005566\|Ga0066693_10008519	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300005921\|Ga0070766_10387075	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300006034\|Ga0066656_10053136	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300006854\|Ga0075425_100990909	All Organisms → cellular organisms → Bacteria → Acidobacteria	959	Open in IMG/M
3300007788\|Ga0099795_10146490	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300009012\|Ga0066710_100108794	All Organisms → cellular organisms → Bacteria	3736	Open in IMG/M
3300009012\|Ga0066710_102081641	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300009038\|Ga0099829_10371133	All Organisms → cellular organisms → Bacteria → Acidobacteria	1180	Open in IMG/M
3300009038\|Ga0099829_11437633	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300009088\|Ga0099830_10023905	All Organisms → cellular organisms → Bacteria	4028	Open in IMG/M
3300009088\|Ga0099830_11612486	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300009089\|Ga0099828_10843089	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300009089\|Ga0099828_11004552	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300009090\|Ga0099827_11148376	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300009137\|Ga0066709_101878228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	835	Open in IMG/M
3300009524\|Ga0116225_1517473	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300009618\|Ga0116127_1175937	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300009624\|Ga0116105_1011537	All Organisms → cellular organisms → Bacteria → Acidobacteria	1801	Open in IMG/M
3300009646\|Ga0116132_1132592	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300009665\|Ga0116135_1446034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	530	Open in IMG/M
3300010159\|Ga0099796_10412428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	594	Open in IMG/M
3300010304\|Ga0134088_10151546	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300010329\|Ga0134111_10140571	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300010336\|Ga0134071_10301242	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300010379\|Ga0136449_103057917	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300010401\|Ga0134121_12245218	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300011120\|Ga0150983_13448515	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300011269\|Ga0137392_10961711	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300011271\|Ga0137393_10384082	All Organisms → cellular organisms → Bacteria → Acidobacteria	1202	Open in IMG/M
3300011271\|Ga0137393_11756985	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300012096\|Ga0137389_10163339	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300012096\|Ga0137389_10184241	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	1730	Open in IMG/M
3300012096\|Ga0137389_10401720	All Organisms → cellular organisms → Bacteria → Acidobacteria	1170	Open in IMG/M
3300012198\|Ga0137364_10987627	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300012198\|Ga0137364_11005311	Not Available	630	Open in IMG/M
3300012199\|Ga0137383_10336923	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300012205\|Ga0137362_10821151	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300012206\|Ga0137380_10028421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5154	Open in IMG/M
3300012206\|Ga0137380_10111175	All Organisms → cellular organisms → Bacteria → Acidobacteria	2504	Open in IMG/M
3300012207\|Ga0137381_10165047	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300012208\|Ga0137376_10302712	All Organisms → cellular organisms → Bacteria → Acidobacteria	1388	Open in IMG/M
3300012209\|Ga0137379_11071823	Not Available	711	Open in IMG/M
3300012351\|Ga0137386_10027439	All Organisms → cellular organisms → Bacteria	3867	Open in IMG/M
3300012351\|Ga0137386_10126384	All Organisms → cellular organisms → Bacteria → Acidobacteria	1820	Open in IMG/M
3300012356\|Ga0137371_10203124	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300012359\|Ga0137385_10040288	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4188	Open in IMG/M
3300012361\|Ga0137360_10046112	All Organisms → cellular organisms → Bacteria → Acidobacteria	3117	Open in IMG/M
3300012362\|Ga0137361_10134622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Spongiibacteraceae	2192	Open in IMG/M
3300012362\|Ga0137361_10542128	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300012683\|Ga0137398_10050500	All Organisms → cellular organisms → Bacteria → Acidobacteria	2461	Open in IMG/M
3300012917\|Ga0137395_10846450	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300012918\|Ga0137396_10003940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8442	Open in IMG/M
3300012922\|Ga0137394_10115800	All Organisms → cellular organisms → Bacteria → Acidobacteria	2266	Open in IMG/M
3300012923\|Ga0137359_11086441	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300012923\|Ga0137359_11396299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012925\|Ga0137419_10579665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300012925\|Ga0137419_11929197	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300012927\|Ga0137416_10837925	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300012929\|Ga0137404_10716142	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300012930\|Ga0137407_10597777	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300012931\|Ga0153915_11650124	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300012972\|Ga0134077_10310606	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300014152\|Ga0181533_1048056	All Organisms → cellular organisms → Bacteria → Acidobacteria	2234	Open in IMG/M
3300014153\|Ga0181527_1206983	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300014155\|Ga0181524_10236066	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300014160\|Ga0181517_10368208	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300014491\|Ga0182014_10003325	All Organisms → cellular organisms → Bacteria	19399	Open in IMG/M
3300014501\|Ga0182024_12330119	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300014638\|Ga0181536_10511838	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300014839\|Ga0182027_10580599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	1209	Open in IMG/M
3300015052\|Ga0137411_1004918	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300015052\|Ga0137411_1232437	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300015241\|Ga0137418_10009480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8955	Open in IMG/M
3300015241\|Ga0137418_10084884	All Organisms → cellular organisms → Bacteria	2867	Open in IMG/M
3300015264\|Ga0137403_10105749	All Organisms → cellular organisms → Bacteria → Acidobacteria	2819	Open in IMG/M
3300015359\|Ga0134085_10261638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300017939\|Ga0187775_10541064	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300018024\|Ga0187881_10034619	All Organisms → cellular organisms → Bacteria → Acidobacteria	2583	Open in IMG/M
3300019881\|Ga0193707_1012622	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300020001\|Ga0193731_1065546	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300020579\|Ga0210407_10515185	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300021178\|Ga0210408_10047500	All Organisms → cellular organisms → Bacteria → Acidobacteria	3360	Open in IMG/M
3300021181\|Ga0210388_10149676	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300022532\|Ga0242655_10076549	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300024271\|Ga0224564_1021411	Not Available	1175	Open in IMG/M
3300024330\|Ga0137417_1303563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1984	Open in IMG/M
3300024330\|Ga0137417_1430086	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300025414\|Ga0208935_1045752	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300025460\|Ga0208562_1002010	All Organisms → cellular organisms → Bacteria → Acidobacteria	7003	Open in IMG/M
3300026342\|Ga0209057_1055242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1837	Open in IMG/M
3300026377\|Ga0257171_1073480	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300026514\|Ga0257168_1044883	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300026524\|Ga0209690_1018266	All Organisms → cellular organisms → Bacteria	3583	Open in IMG/M
3300026530\|Ga0209807_1073793	Not Available	1524	Open in IMG/M
3300026542\|Ga0209805_1025752	All Organisms → cellular organisms → Bacteria	3040	Open in IMG/M
3300026542\|Ga0209805_1068134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1737	Open in IMG/M
3300026552\|Ga0209577_10152614	All Organisms → cellular organisms → Bacteria → Acidobacteria	1815	Open in IMG/M
3300027663\|Ga0208990_1006336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3916	Open in IMG/M
3300027674\|Ga0209118_1040058	All Organisms → cellular organisms → Bacteria → Acidobacteria	1411	Open in IMG/M
3300027829\|Ga0209773_10368212	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300027889\|Ga0209380_10533150	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300027903\|Ga0209488_10326314	All Organisms → cellular organisms → Bacteria → Acidobacteria	1143	Open in IMG/M
3300027905\|Ga0209415_10014853	All Organisms → cellular organisms → Bacteria	12688	Open in IMG/M
3300027986\|Ga0209168_10206972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300028047\|Ga0209526_10050876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2918	Open in IMG/M
3300030906\|Ga0302314_10629537	Not Available	1114	Open in IMG/M
3300031708\|Ga0310686_103324829	All Organisms → cellular organisms → Bacteria → Acidobacteria	4037	Open in IMG/M
3300031708\|Ga0310686_111517709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4821	Open in IMG/M
3300031820\|Ga0307473_10464487	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300033829\|Ga0334854_045301	All Organisms → cellular organisms → Bacteria → Acidobacteria	1054	Open in IMG/M
3300033887\|Ga0334790_180203	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300034085\|Ga0373908_095545	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300034091\|Ga0326724_0135423	All Organisms → cellular organisms → Bacteria → Acidobacteria	1550	Open in IMG/M
3300034091\|Ga0326724_0574874	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300034124\|Ga0370483_0303484	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300034282\|Ga0370492_0487004	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.81%
Engineered	Engineered	1.46%
Host-Associated	Host-Associated	0.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.59%
Aquatic	Environmental → Aquatic	10.22%
Plants	Host-Associated → Plants	0.73%
Solid Waste	Engineered → Solid Waste	0.73%
Bioremediation	Engineered → Bioremediation	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.94%
Freshwater	Environmental → Aquatic → Freshwater	10.22%
Peat	Environmental → Terrestrial → Peat	3.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.73%
Grass	Engineered → Solid Waste → Grass	0.73%
Metal	Engineered → Bioremediation → Metal	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.22%
Loam	Environmental → Terrestrial → Soil → Loam	8.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.73%
Composting	Engineered → Solid Waste → Grass → Composting	0.73%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.11%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.19%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.73%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.73%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.19%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.46%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.46%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.73%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.73%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.73%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.73%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034085	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B3A4.3	Engineered	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_00199290	2170459017	Switchgrass, Maize And Mischanthus Litter	PLGADIVHVREDRRNGAGLTGRLGSPGGRVKMFDKKLVYTIIGGKDLDCGSAHLRVSLALTRGH
deeps_00720580	2199352024	Soil	IELPRDLQMWSCKPDPLGADIVHVGEDCSDGADLARRFGSPGGGLEIFDQELVDAIVSGKDLDSGSAELRGILG
JGI12637J13337_10214651	3300001137	Forest Soil	MRSGKPDPLAADIVHVREDRRNGAGRHLAVRAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVSTRGHGSLLLDL*
JGIcombinedJ26739_1000208151	3300002245	Forest Soil	MVHVREDRRNGAGLAGRFGSPGGRVKMFDNKLVHAIIGGEDLDCGSAEVECVNLVLTRAHGSLFLDL*
JGI25384J37096_102330041	3300002561	Grasslands Soil	WNLQVRSCKPDPLGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTRGHGS*
Ga0066672_105534342	3300005167	Soil	DRRNGAGRSVAGRAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTIDVLTRGHGSLLLDL*
Ga0066683_102128052	3300005172	Soil	VREDRRNGAGLAGRSGTPGGRVKMFDNNLVHAIVGEKDPGGKVLDCGSAELSVNLGLTRWSRLATP*
Ga0066680_102171041	3300005174	Soil	KPDPLGADIVHVREDRRNGADLAGRFGAPGSRVKMFDKHLVHAIIGGKDLDCGSAQFRVNLPRVNLSRVNLRLTRGHGSLLLDL*
Ga0066688_104575833	3300005178	Soil	CKPDPLAADIVHVREDRRNGADFVFAGRIGSPDGRVKMFDKNLVHAITGGKDLDCGSAELSVNLGLTIGALTRGHGSLLRNL*
Ga0066688_108218701	3300005178	Soil	ADIVHVREDRRNGADVVFSGVFAGRFGCRRSGTPGGRVKMFDKHLVHAIIGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0066678_109002982	3300005181	Soil	VHVSEDRRNGARLAGRFGSPGARVKMFDKNLVHAIVGGKDPDCGLAELSVNLVLARGHGSRLLGL*
Ga0070708_1002456863	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LGADIVHVREDRGDGADFVFAGRFGCRFCCPGGRVKMFDKHLVHAIIGGKDLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0070708_1008908951	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VHVGEDRRNGAGLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLCVNLLSVNLFMDDREAVNVLTRGHGSLLLDLIILQGRRPSGM*
Ga0066689_100429471	3300005447	Soil	VRSCKPDPLGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIVGEKDPGGKVLDCGSTELSVNLGLTIDVLTRGHGSLLLDL*
Ga0066689_100892711	3300005447	Soil	KPDPLAADIVHVGEDRGNGAGLAGRFGCRRFGFPGGRVKMFDKHLVHALIGGKDLDCGSAELSVNLGLRRGHGSLLLDL*
Ga0070707_1000422691	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MQRRLVEQAAAETAADIVHVREDRRNGADLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVN
Ga0070698_1004125811	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQRRLVEQAAAETAADIVHVREDRRNGADLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0066701_103093073	3300005552	Soil	CKPDPLAADIVHVREDRRNGADFVFAGRIGSPDRRVKMFDKNLVHAITGGKDLDCGSAELSVNLGLTIGALTRGHGSLLRNL*
Ga0066695_105004041	3300005553	Soil	VRSCKPDPLGADIVHVREDRRNGAGLAGRFGFPGGRVKMFDENLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0066707_101397621	3300005556	Soil	LQVRSCKPDPLGADIVHVREDRRNGAGFAGRFGSPGGRVKMFDKNLVHAIIGGKDPDRGSAELSVNLVLTRGHASLLLDL*
Ga0066707_108631772	3300005556	Soil	LGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIVGEKDPGGKVLDCGSTELSVNLGLTIDVLTRGHGSLLLDL*
Ga0066693_100085194	3300005566	Soil	IVHVREDRRNGADVVFSGVFAGRFGCRRSGSPGGRVKMFNKNLVHAIIGEKDPGGKVLDCGSAELSVNLGLTIDDLTRGHGLP*
Ga0070766_103870754	3300005921	Soil	GIVHVREDRRNGAGLAGRFGPPGDRVKMFNENLVHPIIGGKDPNRGSAELSVNLGLTRGHGS*
Ga0066656_100531364	3300006034	Soil	AGRFGCRRSGSPGGRVKMFNKNLVHAIIGEKDPGGKVLDFGSAELSVNLGLTIDDLTRGHGLP*
Ga0075425_1009909092	3300006854	Populus Rhizosphere	ADIVHVREDRGDSAGLAGWFGSPGTRVKVFDQNLVHAIIGGKDPDRGAAELSVNLMLTRGHG*
Ga0099795_101464903	3300007788	Vadose Zone Soil	VHVGEDCRDGAGFARRIGFPGARVEMLDKNLVHAFIGGKDLNCGSVELCVNFVLTRGHGSSFIRRSPTGIFYVC*
Ga0066710_1001087945	3300009012	Grasslands Soil	QMRSCKPDPLAADIVHVRKDRRNGAGRSVAGRAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTIDVLTRGHGSLLLDL
Ga0066710_1020816411	3300009012	Grasslands Soil	RSWNLQVRSCKPDPLAADIVHVREDRRNGAGLARRFGSPCGRVKMFDEKLVHALIGGKDLDCGSAELSVNLGLTRAHGSLLRDL
Ga0099829_103711331	3300009038	Vadose Zone Soil	PDPLGADIVHVREDRRNGADLVFAGRFGSPGGRVKMFEKNLVHAIIGAKDPDCGSAELSLNRGLTRGHGSLLLDL*
Ga0099829_114376332	3300009038	Vadose Zone Soil	PLAADIVHVREDCRNGAGRHLAGRAGRFGSPGGRIKMFDKDLVHVIVGGKDLDRGSAELSVNLGLTMGALTRGHGSLAPLPMIVLGQSILW*
Ga0099830_100239055	3300009088	Vadose Zone Soil	VHWREDRRNGADLVFAGRFGCRFGCPGGRVEMFDKHLVHAIVHEKDPGGKDLHCGSAELSVNLGLTRGHGSLLPDL*
Ga0099830_116124862	3300009088	Vadose Zone Soil	DIVHVRENRHNGTGLAGRFGSPDGRVKMFDKNLVHPIIDCKNLDCRSAELSVNLVLTRGHGSLFLDL*
Ga0099828_108430892	3300009089	Vadose Zone Soil	VNDLRAASDRRKGADLVFAGRFGSPGGRVKMFDKHLVHALIGGKDLDCGSAELRVNLLRVNLFMDDREAVNVLTRGHGSLLLD
Ga0099828_110045523	3300009089	Vadose Zone Soil	VHVREDRRNGADLLFAGRFGSPGGRVEMFDKNLVHAIISGKDLDRGSAELSVNLGLTRGHGCLFLDL*
Ga0099827_111483762	3300009090	Vadose Zone Soil	ADIVHVREDRRNRADLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLRVKSSVNLVLTRGHGSLVLDLSYVRAVGHPEVIHFIRHAEPPGD*
Ga0066709_1018782281	3300009137	Grasslands Soil	REDRRNGAGLAGRSGTPGGRVKMFDNNLVHAIVGEKDPGGKVLDCGSAELSVNLGLTRWSRLATP*
Ga0116225_15174731	3300009524	Peatlands Soil	RQPDPLGPDIVHVREDGGYGTDFAGRFGAPGGRVKMFDENLVDAVVGVKDLDRGAAELGVKFELTGGHGAVLRNL*
Ga0116127_11759371	3300009618	Peatland	KPDPLAADIVHVREDRHNGAGLAGRFGFPGGRLKMFDKNLVHAIVGGKDPDCGSAELSVNPGLTIGVLTRGHGFLLLDL*
Ga0116105_10115374	3300009624	Peatland	VHVREDGRDGAGLAGRFGAPGGGVEMFDQKLVDAIVGGEDADCGRAELSFNLGLTRGNGLATPRLIIFRVGE*
Ga0116132_11325921	3300009646	Peatland	RRNGAGLAGRFSSPGGRVKMFDKNLVHAIIGGKDLDCGPAELSVNLVLTRGHGSLLLDL*
Ga0116135_14460343	3300009665	Peatland	GRNGADLAGRFGSPGGGVKMFDKNLVDAIIGGKHLDRGSAELSGNLGLTRGHGCLLPDL*
Ga0099796_104124281	3300010159	Vadose Zone Soil	MRSRKPDPLGAHIVHVREDRRNSAGFAFAGRFRFPGSRIKMFDQNLVDPIIDGKDLDCGAAELSVNPGLTRGHGSYSLTYSTFESSFKEKR*
Ga0134088_101515462	3300010304	Grasslands Soil	LERTLHVREDRRNGAGLAGRSGTPGGRVKMFDNNLVHAIVGEKDPGGKVLDCGSAELSVNLGLTRWSRLATP*
Ga0134111_101405712	3300010329	Grasslands Soil	VFSGVFAGRFGCRRSGPPGGRVKMFDKNLVDAIVGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0134071_103012422	3300010336	Grasslands Soil	EDRRNGAGLAGRFGSPGGRVEMFDKNLIDPIIGGKDLDCGSAQLRAMLSVNLM*
Ga0136449_1030579172	3300010379	Peatlands Soil	KPDPLGPDIVHVREDRRNGADLAGRFGPPGGRVKMFDENLVHAIIGGKDLNCGSAESSVNLALTRGHGSLLLDL*
Ga0134121_122452181	3300010401	Terrestrial Soil	MRSGEPDPLGADIVHVGEDRRNGAGLAGRFGSPGGGVKMFNKNLIYAIVGGKDLDCGSGGLRFGH
Ga0150983_134485152	3300011120	Forest Soil	VRSGKPDPLAADVVHVREDRRNSACLAGRFGFPCGGVKMFDKKLVHAIIGGKDADCGSAELSVNLVLTRGHGSLLLEP*
Ga0137392_109617112	3300011269	Vadose Zone Soil	VHVREDRRNGADLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLSVKLSVNLVLTRGHGSLLLDL*
Ga0137393_103840822	3300011271	Vadose Zone Soil	DPLGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0137393_117569851	3300011271	Vadose Zone Soil	MHVREDCHDAADLAGRFGSPDGRIKMFDKNLVHAIIGGKDPDCGSAELSVNLGLTIGALTRGHGSLLLDL*
Ga0137389_101633392	3300012096	Vadose Zone Soil	VHWREDRRNGADLVFAGRFGCRFCCPGGRVEMFDKHLVHAIVHEKDPGGKDLHCGSAELSVNLGLTRGHGSLLPDL*
Ga0137389_101842415	3300012096	Vadose Zone Soil	AADVVHVREDRRNGAGLVFAGWFGSPDGKVKMFDKSPVHAIISGKDLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0137389_104017204	3300012096	Vadose Zone Soil	PLAADIVHVAEDRRNGAGLVFAGRFGSPGGRVKMFDKNLVHALIGGKDLDRGSAELSVNLGLTIGALTRGHGSLLLDL*
Ga0137364_109876272	3300012198	Vadose Zone Soil	SGVFAGRFGCRRSGPPGGRVKMFDKNLVDAIVGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL*
Ga0137364_110053111	3300012198	Vadose Zone Soil	NGAGVVFSGVFAGRFGCRRSGPPGGRVKMFDKNLIDAIVGEKDPGGKVLDCGSAELSVNLVLMRGHGSLLLDL*
Ga0137383_103369231	3300012199	Vadose Zone Soil	ADLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLRAKLSVNLVLARGHGSSLLDL*
Ga0137362_108211511	3300012205	Vadose Zone Soil	NATDLAGRFGSPGGRVKMFDKSLVHAIIGGKDLDCGSAELSVNLGLTRAHRSLLLDLSYF
Ga0137380_100284211	3300012206	Vadose Zone Soil	PDPLAADIVHVCEDRRNATDLAGRFGSPGGRVKMFDKSLVHAIIGGKDLDCGSAELSVNLGLTRAHRSLLLDLSYF*
Ga0137380_101111754	3300012206	Vadose Zone Soil	KPDPLGADIVHVREDRRNGAGLAGRFGSPGGGVKMLDKNLVHAIIGGKDLNCGSAQLSVKSSVNLVLTRGHGSLLLDL*
Ga0137381_101650473	3300012207	Vadose Zone Soil	VHVREDRRNGADVVFSGVFAGRFGCRRFGFPGGWVKMFDKNLIDAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0137376_103027122	3300012208	Vadose Zone Soil	WNLQVRSCKPDPLGADIVHVREDRRNGAGFAGRFGSPGGRVKMFDKNLVHAIIGGKDPDRGSAELSVNLVLTRGHASLLLDL*
Ga0137379_110718231	3300012209	Vadose Zone Soil	ADIVHVREDRRNGAGLAGRFGSPGGGVKMLDKNLVHAIIGGKDLNCGSAQLSVKSSVNLVLTRGHGSLLLDL*
Ga0137386_100274391	3300012351	Vadose Zone Soil	CKPDPLGADIVHVREDRRNGAGFAGRFGSPGGRVKMFDKNLVHAIIGGKDLDRGSAELSVNLVLTRGHASLLLDL*
Ga0137386_101263844	3300012351	Vadose Zone Soil	MRSCKPDPLAADIVQVCEDRRNATDLARRFGSPGGRVKMFDKSLVHAIIGGKDLDCGSAELSVNLGLTRAHRSLLLDLSYF*
Ga0137371_102031242	3300012356	Vadose Zone Soil	VFSGVFAGRFGCRRSGTPGGRVKMFDKNLVDAIVGEKDPGGRDLDCGSAELSLNLGLTIGALTRGHGSLLLDL*
Ga0137385_100402881	3300012359	Vadose Zone Soil	VRSCKPDPLAADIVHVCEDRRNATDLARRFGSPGGRVKMFDKSLVHAIIGGKDLDCGSAELSVNLGLTRAHRSLLLDLSYF*
Ga0137360_100461121	3300012361	Vadose Zone Soil	LGADIVHVREDRRNGAGLAGRIGFPGARVKVVGKNLVHAIIGGKDLDCGSTELSVIFVLTRGHGSLLLGL*
Ga0137361_101346223	3300012362	Vadose Zone Soil	RRNGAGLARRFGSPGGRVKMFDKNLVHAIIGAKELDCGSAELSVNLVLTRGHDSLLLDL*
Ga0137361_105421281	3300012362	Vadose Zone Soil	DRRNGADLAGRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAQLSVKLSVNLVLTRGHGSLLLDL*
Ga0137398_100505004	3300012683	Vadose Zone Soil	VDVREDRRNGTDIAGRFGSPGGRVKMFDKDLVHAITGGESLDCGSAELSVNLMLSRGHGPYSLTYNTSRPSATRN*
Ga0137395_108464503	3300012917	Vadose Zone Soil	HVREDRRNSAGRHLAGRAGRFGSPGGRVKMFDKHLVHAIIGGKDLDCGSPELSVHLGLMIGALTRSHGSLAP*
Ga0137396_100039408	3300012918	Vadose Zone Soil	CKPDPLGADIVQVREDRRNGAGLAGRFGSPGGRVKMSDKNLGHAIIGGKDLDCASAELSVNLGLRRGHGSLLLDL*
Ga0137394_101158004	3300012922	Vadose Zone Soil	KPDPLGADIVHVREDRRNGADLAGRFGSPGGRVKMFDKHLVHALIDGKDLDGGSSQFRVKKSRVNLLSVNLRLTRGHGSLLLDP*
Ga0137359_110864412	3300012923	Vadose Zone Soil	EDRSDGAGAGIAGRLGRRFCGPGGRVKMFDKNLVHPIVGGKDLECGSAELSVNLTQIFLVW*
Ga0137359_113962991	3300012923	Vadose Zone Soil	SCKPDPLGADIVHVREDRRNAAGLAGRFGSPGGRVKMFDENLVHAIINGKDLDCGSAELSLNLGLMRGHGSLLLDL*
Ga0137419_105796651	3300012925	Vadose Zone Soil	LAADIVHVREDRHNGAGLAGRFGSPGSTVKMFDKNLVHALIGGKDLDCGSAELSVNLVLTRGHGSLLLDP*
Ga0137419_119291971	3300012925	Vadose Zone Soil	MHVREDRRNGADLAGRFGSPGGEVKMFDKNLVHAIIGGKDLNCGSAELRVNLVLTGGHGSLLLDLYYFSCPT*
Ga0137416_108379251	3300012927	Vadose Zone Soil	VHVREDRRNGAGLAGRFGFPCRRVKMFDKNLVHAIIGGKDLDCRSAELSLNLVLTRGHGSLFLDL*
Ga0137404_107161422	3300012929	Vadose Zone Soil	VHVREDRRNCADLAGRPGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSANLVLTRGHGSLLLDL*
Ga0137407_105977773	3300012930	Vadose Zone Soil	WNLQVRSCKPDPLGADIVHVREDRRNRAGLAGRLGSPGCRVKMFDENLVHAIIGGKDLDCGSGELSVNLV*
Ga0153915_116501241	3300012931	Freshwater Wetlands	IVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0134077_103106062	3300012972	Grasslands Soil	KPDPLGADIVHVREDPRNRAGLAGRLGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL*
Ga0181533_10480561	3300014152	Bog	IVHVREDRHNGAGLAGRFGSPGRRVKMFDKNLVHAIVGGKDLDCGSAELSVNPGLTIGVLTRGHGFLLLDL*
Ga0181527_12069831	3300014153	Bog	CKPDPLGADIVHVREDRRNGAGLAGRFGSPGGRVKMLDKNLVYAIIGGKDLDCGSAELSVNLVLMRGHGSLLLDL*
Ga0181524_102360661	3300014155	Bog	LGADIVHVREDRRNGAGLAGRFGSPGGRVKMLDKNLVYAIIGGKDLDCGSAELSVNLVLMRGHGSLLLDL*
Ga0181517_103682082	3300014160	Bog	KPDPLGADIVHVREDRRNGAGLAGRFGSPGGRVEMFDKNLVDAIVGGKDPDCGSAELSVNLGLTRGRGSLLLDL*
Ga0182014_1000332515	3300014491	Bog	MPPLSATPAGRLGFPRGSVKMFDEDLVDAIIGGKNLDCGLAQLSVKLGLVRGHGSALLDR
Ga0182024_123301192	3300014501	Permafrost	WNLQVRSCKPDPLGADIVHVREDRRYGADLARRFGSPGGRVKMFDKNLVHAIVGGKDLDRGSAELSVNLVLTRGHGSLLLDL*
Ga0181536_105118381	3300014638	Bog	VHVREDGGNGAGLAGWFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTRGHGSLLLDLQYSRVVGDTETIVLCH
Ga0182027_105805991	3300014839	Fen	LAGRFGSPGGGIEIFDKHLVHAIIGGKDPDCGSAKVSLVLTSRHGSLLLGPSYFRAVENDRPISRK*
Ga0137411_10049182	3300015052	Vadose Zone Soil	VHVREDRRNGADCVFAGRFGSPRGRVKMFDKNLVHPIVGGKDLDRGSSELSVNLGLTIDDLTRGHGSLLLAL*
Ga0137411_12324371	3300015052	Vadose Zone Soil	EDRRNGADLAGRFGAPGSRVKMFDKHLVHAIIGGKDLDCGSAQFRVNLPRVNLSRVNLRLTRGHGSLLLDL*
Ga0137418_100094808	3300015241	Vadose Zone Soil	HVREDRRNGAGLAGRFGSPGGRVKMSDKNLGHAIIGGKDLDCASAELSVNLGLRRGHGSLLLDL*
Ga0137418_100848841	3300015241	Vadose Zone Soil	HVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLYL*
Ga0137403_101057496	3300015264	Vadose Zone Soil	EDRRNGADLAGRFGSPGGRVKMFDKHLVHALIDGKDLDGGSSQFRVKKSRVNLLSVNLRLTRGHGSLLLDP*
Ga0134085_102616381	3300015359	Grasslands Soil	IVHVREDRRDGADLAGRFGSPGDRVKMFDKNLVHAIIGGKDLDCGSAELSVNLGLTRGHGS*
Ga0187775_105410641	3300017939	Tropical Peatland	VHVREDRRNGAGLAGRFGSPGGKVKMFDKNLVHAIIGGKDLDCGSAESSVNLVLMRGHGSLLLDL
Ga0187881_100346193	3300018024	Peatland	VHVREDGRNAADVAGRFGSPGGRVKMFDENLVDAIVGAKDLDCGSPQLRVDLGLTRGHGSLLLT
Ga0193707_10126221	3300019881	Soil	VREDRCNAADLGGRFGSPGGRVEMFDKNLVDAIIGGKDLNCGTAELSVNLGLTRGRVAHSSPVLA
Ga0193731_10655462	3300020001	Soil	VRSCKPDPLAADIVHVREDRCNAADLGGRFGSPGGRVEMFDKNLVDAIIGGKDLNCGTAELSVNLGLTRGRVAHSSPVLA
Ga0210407_105151852	3300020579	Soil	WNLQVWSCKPDPLGADIVHVREDRRNGADLAGRFGFPCGRVKMFDKSLVHAIIGDKDLNCGPAELSVNLVLRRGHGCLLP
Ga0210408_100475001	3300021178	Soil	MVHVREDRRNGAGLAGRFGSPGGRVKMFDKRLVHAIIGGEDLDCGSAELSVNLVLTRVHGSLLLDL
Ga0210388_101496761	3300021181	Soil	GRFGSPSGRVKMFDKHLVHALIRGKDLDCGSAQLRMNLSCVSLPSLNLLLTLGQGSLPLDLCIFQVRGQIRNSAE
Ga0242655_100765492	3300022532	Soil	DRRNAAGLTRRFGSPGGRVKMFDKNLVDAIIGGKDLDCGSAEWSVNSVLARGHGSLILDL
Ga0224564_10214112	3300024271	Soil	ADIVHVREDRRNGAGVTGRFGWRFGFPGGRVKMFDEKLVHALIGGKDLEGGSAELSVNLVSMRGHGSLLPDL
Ga0137417_13035631	3300024330	Vadose Zone Soil	MRRCKPDPLAADIVHVREDRRNAADLAGRLSSPGGRIKMFEEHLVHALVGGKDPDCGLAELRVNLGLTRGH
Ga0137417_14300862	3300024330	Vadose Zone Soil	VRAAADAELQVRSGKPDPLAADIVHVREDRSNRAGLAGRFGSPGGRVKMFDKHLVHALIDGKNLNRGSAQLCVNLFSLNLG
Ga0208935_10457521	3300025414	Peatland	VHVREDGCDGADLARRFGCPGGRVKMGDKNLVHAIIGGKDLDCGSANLNMDSGLTSGHGSLPLDIIFPGRRPF
Ga0208562_10020106	3300025460	Peatland	DIVHVREDRHNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNPGLTIGVLTRGHGFLLLDL
Ga0209057_10552421	3300026342	Soil	GADVVFSGVFAGRFGCRRSGTPGGRVKMFDKNLVDTIVGEKDPGGKVLDCGSAELSVNLGLTIDDLTRGHGSLLLDL
Ga0257171_10734802	3300026377	Soil	RSCKPDPLAADIVHVREDRHNGACLAGRFGSPGGRIKMFNKNLVHAIIGGKDLYCGSAELRVNLVLTRGHGSLLPDL
Ga0257168_10448832	3300026514	Soil	DRRNGAGRHLAGRAGRFGSPGGRVKMFDKHLVHALIGGKDLDCGSAELSVNLALTRGHGSLLLDL
Ga0209690_10182662	3300026524	Soil	LHVREDRRNGAGLAGRSGTPGGRVKMFDNNLVHAIVGEKDPGGKVLDCGSAELSVNLGLTRWSRLATP
Ga0209807_10737932	3300026530	Soil	AGVVFSGVFAGRFGCRRSGTPGGRVKMFDKNLVDAIVGEKDPGGKVLDCGSAELSVNLGLTIDDLTRGHGSLLLDL
Ga0209805_10257524	3300026542	Soil	DRRNGADVVFSGVFAGRFGCRRSGTPGGRVKMFDKNLVDAIVGEKDPGGKVLDCGSAELSVNLGLTIDDLTRRHGSLLLDL
Ga0209805_10681342	3300026542	Soil	PLAADIVHVREDRRNGADVVFSGVFAGRFGCRRSGSPGGRVKMFNKNLVHAIIGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL
Ga0209577_101526141	3300026552	Soil	VRSCKPDPLGADIVHVREDRRNGAGRSVAGRAGRFGSPGGRVKMFDKNLVHAIIGEKDPGGKVLDCGSAELSVNLGLTRGHGSLLLDL
Ga0208990_10063361	3300027663	Forest Soil	LGADIVHVREDRRNRAGLPGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGLAELSVNLVLTRGHGSLLQPIIIPGRRLLGS
Ga0209118_10400586	3300027674	Forest Soil	DRRNGADFAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGAAELSVNLVLTRSHGSLLRDL
Ga0209773_103682121	3300027829	Bog Forest Soil	VVELSGNLQVRSRKPDPLRTDVVHVREDSRNGAGLAGRLGSPRCRVKLLDQNLVDAIVRGKDLDCRSAELSLNLVLA
Ga0209380_105331501	3300027889	Soil	KPDPLGAGIVHVREDRRNGAGLAGRFGPPGDRVKMFNENLVHPIIGGKDPNRGSAELSVNLGLTRGHGS
Ga0209488_103263142	3300027903	Vadose Zone Soil	IVYVREDRRNGSGLAGRFGSPGGRVKMFDKNLVHALIGGKDLDCGSAQFRVNLPRVNPLSVNLRLTRRHGSLLLDP
Ga0209415_100148535	3300027905	Peatlands Soil	VYVREDRRNGAGLAGRFGSPGGRVKTFDESLVHAIICGKDPDRGSAELSVNLLLTRGHGSLFLDLSYVRAAGLEG
Ga0209168_102069722	3300027986	Surface Soil	AHIVDVREDCHNVSDVAGRFGCPSGRVKMFNENLVDAIIGGKNLDCGSAKLSVNLVLMRGHGSLFLDL
Ga0209526_100508764	3300028047	Forest Soil	DRRNGAGLAGPFGSPGGRVKMFDNKLVHAIIGGEDLDCGSAEVECVNLVLTRAHGSLFLD
Ga0302314_106295371	3300030906	Palsa	MREDRRNGADLAGRFGPPGRFKMFNKNLVHPIIGGKDLESGSAELSVDLVLRRGHGSLLLEL
Ga0310686_1033248295	3300031708	Soil	RSCKPDPLGADIVHVREDRRNGAGVTGRFGWRFGFPGGRVKMFDEKLVHALIGGKDLEGGSAELSVNLVSMRGHGSLLPDL
Ga0310686_1115177093	3300031708	Soil	VHVREDRRNGAGFAGRFGFPGGSVKMFDKNLVHAIIGGKDLDCGSAELSVNLVWTRGHGSLLLDLQYFRAVGFTGHDLQSERRRQNAAD
Ga0307473_104644871	3300031820	Hardwood Forest Soil	MRSCKPDPLAADIVHVREDRRNVADFVLAGRFGSPGGRVKMFDKNLVHAISGGKDLDCGSAELSVNLGLTRGHGSLLLDLTYFRAAKAS
Ga0334854_045301_821_1018	3300033829	Soil	VHVREDRRDAAGLAGRFRSPRGRVKMFDENLVHALVNGKNPPCGSAEFSLNFALMRGHVSLLLDL
Ga0334790_180203_65_262	3300033887	Soil	VHVREDRRNGTGLAGRFGSPGSRVKVFDQDLVHAIVGGKNPDCGSPELSVNLVLTCGHGSLLLHL
Ga0373908_095545_3_218	3300034085	Sediment Slurry	PLGADIVHVREDRRNGAGLAGRFGSPGGRVKMFDKNLVHAIIGGKDLDCGSAELSVNLVLTRGHGSLLLDL
Ga0326724_0135423_18_215	3300034091	Peat Soil	VHVRENRRDGADLAGRFGSPGGWVEMFDKNLVHPIVGGKDPDCGSAELSVNLVWTRGHGSLLLDL
Ga0326724_0574874_357_554	3300034091	Peat Soil	VHVREDRRNAADIARRFGFPGGRVKMFDQHLVHALIGGKDPHCVSARLRVCFVLARGHGSLLLDL
Ga0370483_0303484_158_346	3300034124	Untreated Peat Soil	MDVRENCRNGACLAGRFGFPGVRIKMLDQKLVHVIVGGKDLDCLSAEIGVNLVLTHVAAHTS
Ga0370492_0487004_97_294	3300034282	Untreated Peat Soil	VHVREDRRNGADVARRFGSPGGGVKTFDNNLVYAIIGGEDLDCALTELSVNLVSTRGHGSILLDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056382

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences