Metagenome / Metatranscriptome Family F056381

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056381
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	90 residues
Representative Sequence	VREEEDGRSERHPVMGWIGVEPMGNITPRESELTSVWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVRRLQARMVKVVPEHVLDVA
Number of Associated Samples	123
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.33 %
% of genes near scaffold ends (potentially truncated)	23.36 %
% of genes from short scaffolds (< 2000 bps)	90.51 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.708 % of family members)
Environment Ontology (ENVO)	Unclassified (27.007 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.956 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.61% β-sheet: 0.00% Coil/Unstructured: 62.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF13546	DDE_5	1.46
PF02371	Transposase_20	1.46
PF02810	SEC-C	0.73
PF10049	DUF2283	0.73
PF07690	MFS_1	0.73
PF13565	HTH_32	0.73
PF13655	RVT_N	0.73
PF13384	HTH_23	0.73
PF13669	Glyoxalase_4	0.73
PF03575	Peptidase_S51	0.73
PF13358	DDE_3	0.73
PF01844	HNH	0.73
PF11312	Methyltransf_34	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.46

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.82 %
Unclassified	root	N/A	48.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.09 %
Unclassified	root	N/A	48.18 %
Viruses	superkingdom	All Organisms → Viruses	0.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.09 %
Unclassified	root	N/A	48.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.31 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.73 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.18 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.84 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.38 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.65 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.73 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.73 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.18 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	13.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.38 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	3.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.65 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.46 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.73 %
Candidatus Handelsmanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.73 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.73 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.18 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	11.68 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	4.38 %
Methylococcales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis	3.65 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	2.19 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.19 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.46 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	0.73 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.73 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	0.73 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.73 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.73 %
Bradymonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.18 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	11.68 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	4.38 %
Candidatus Methylumidiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus	3.65 %
Rugamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas	2.19 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2.19 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.46 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.73 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	0.73 %
Bradymonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae	0.73 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	0.73 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.18 %
unclassified Paraburkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia	11.68 %
Candidatus Methylumidiphilus alinenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	3.65 %
Rugamonas aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas aquatica	2.19 %
Desulfonema	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema	1.46 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.46 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.73 %
Desulfobacula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula	0.73 %
Halomonas urmiana	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas urmiana	0.73 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.73 %
Bradymonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae	0.73 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	0.73 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.18 %
Paraburkholderia sp. BL6665CI2N2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	11.68 %
Candidatus Methylumidiphilus alinenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	3.65 %
Rugamonas aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas aquatica	2.19 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.46 %
Desulfonema limicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema → Desulfonema limicola	0.73 %
Desulfobacula toluolica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica	0.73 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.73 %
Halomonas urmiana	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas urmiana	0.73 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.73 %
Bradymonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae	0.73 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	0.73 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.18 %
Paraburkholderia sp. BL6665CI2N2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	11.68 %
Candidatus Methylumidiphilus alinenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	3.65 %
Rugamonas aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas aquatica	2.19 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.46 %
Desulfobacula toluolica Tol2	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica → Desulfobacula toluolica Tol2	0.73 %
Desulfonema limicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema → Desulfonema limicola	0.73 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.73 %
Halomonas urmiana	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas urmiana	0.73 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.73 %
Bradymonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae	0.73 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	0.73 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002562\|JGI25382J37095_10048453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	1639	Open in IMG/M
3300002908\|JGI25382J43887_10228900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	871	Open in IMG/M
3300003373\|JGI25407J50210_10040285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas aquatica	1198	Open in IMG/M
3300004633\|Ga0066395_10125593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1271	Open in IMG/M
3300004633\|Ga0066395_10190013	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005187\|Ga0066675_11252034	Not Available	549	Open in IMG/M
3300005289\|Ga0065704_10278652	Not Available	927	Open in IMG/M
3300005334\|Ga0068869_101053009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	710	Open in IMG/M
3300005445\|Ga0070708_100816396	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300005446\|Ga0066686_10454270	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300005447\|Ga0066689_10556883	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	724	Open in IMG/M
3300005467\|Ga0070706_100356861	Not Available	1362	Open in IMG/M
3300005552\|Ga0066701_10499069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Bradymonadales → Bradymonadaceae	753	Open in IMG/M
3300005555\|Ga0066692_10904402	Not Available	541	Open in IMG/M
3300005713\|Ga0066905_101947022	Not Available	545	Open in IMG/M
3300005719\|Ga0068861_102225507	Not Available	549	Open in IMG/M
3300005764\|Ga0066903_102145199	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300006058\|Ga0075432_10090606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1119	Open in IMG/M
3300006854\|Ga0075425_101960052	Not Available	655	Open in IMG/M
3300006904\|Ga0075424_101336868	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300007255\|Ga0099791_10672432	Not Available	509	Open in IMG/M
3300007265\|Ga0099794_10463198	Not Available	665	Open in IMG/M
3300009012\|Ga0066710_102713864	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300009038\|Ga0099829_11303211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	601	Open in IMG/M
3300009090\|Ga0099827_11330584	Not Available	625	Open in IMG/M
3300009090\|Ga0099827_11864099	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300009147\|Ga0114129_10591397	Not Available	1439	Open in IMG/M
3300009553\|Ga0105249_10240782	Not Available	1789	Open in IMG/M
3300009553\|Ga0105249_12723622	Not Available	566	Open in IMG/M
3300009553\|Ga0105249_12756563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	563	Open in IMG/M
3300009792\|Ga0126374_10075856	Not Available	1818	Open in IMG/M
3300009792\|Ga0126374_11428125	Not Available	565	Open in IMG/M
3300009807\|Ga0105061_1089818	Not Available	524	Open in IMG/M
3300009813\|Ga0105057_1098217	Not Available	539	Open in IMG/M
3300009836\|Ga0105068_1027161	Not Available	990	Open in IMG/M
3300010029\|Ga0105074_1026402	Not Available	979	Open in IMG/M
3300010038\|Ga0126315_10410593	Not Available	852	Open in IMG/M
3300010043\|Ga0126380_11064356	Not Available	686	Open in IMG/M
3300010046\|Ga0126384_10987787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	766	Open in IMG/M
3300010046\|Ga0126384_11196319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	701	Open in IMG/M
3300010046\|Ga0126384_11369325	Not Available	659	Open in IMG/M
3300010047\|Ga0126382_11543007	Not Available	613	Open in IMG/M
3300010109\|Ga0127497_1137894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	549	Open in IMG/M
3300010119\|Ga0127452_1146768	Not Available	588	Open in IMG/M
3300010145\|Ga0126321_1104989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1712	Open in IMG/M
3300010358\|Ga0126370_11311699	Not Available	679	Open in IMG/M
3300010360\|Ga0126372_12781007	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	541	Open in IMG/M
3300010361\|Ga0126378_11308597	Not Available	820	Open in IMG/M
3300010361\|Ga0126378_11493957	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300010366\|Ga0126379_11233675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas aquatica	854	Open in IMG/M
3300010366\|Ga0126379_12947811	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	569	Open in IMG/M
3300010375\|Ga0105239_10653515	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300011271\|Ga0137393_10621095	Not Available	927	Open in IMG/M
3300012189\|Ga0137388_10142813	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300012202\|Ga0137363_10657360	Not Available	886	Open in IMG/M
3300012204\|Ga0137374_10030550	All Organisms → cellular organisms → Bacteria	5898	Open in IMG/M
3300012205\|Ga0137362_11732687	Not Available	512	Open in IMG/M
3300012207\|Ga0137381_11320910	Not Available	614	Open in IMG/M
3300012209\|Ga0137379_10232011	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300012209\|Ga0137379_11345928	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300012349\|Ga0137387_10975240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	609	Open in IMG/M
3300012360\|Ga0137375_10129379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2507	Open in IMG/M
3300012361\|Ga0137360_11533632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	571	Open in IMG/M
3300012362\|Ga0137361_10584695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema → Desulfonema limicola	1024	Open in IMG/M
3300012363\|Ga0137390_10710077	All Organisms → cellular organisms → Bacteria → Proteobacteria	967	Open in IMG/M
3300012375\|Ga0134034_1255511	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300012392\|Ga0134043_1148316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	503	Open in IMG/M
3300012398\|Ga0134051_1375422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	865	Open in IMG/M
3300012400\|Ga0134048_1157221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	588	Open in IMG/M
3300012917\|Ga0137395_10050375	All Organisms → cellular organisms → Bacteria → Proteobacteria	2615	Open in IMG/M
3300012917\|Ga0137395_10904965	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	638	Open in IMG/M
3300012923\|Ga0137359_10396316	Not Available	1224	Open in IMG/M
3300012929\|Ga0137404_10155586	Not Available	1905	Open in IMG/M
3300012948\|Ga0126375_10911091	Not Available	707	Open in IMG/M
3300012971\|Ga0126369_11404173	Not Available	788	Open in IMG/M
3300013306\|Ga0163162_11255451	Not Available	841	Open in IMG/M
3300013306\|Ga0163162_12056009	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300014154\|Ga0134075_10571740	Not Available	511	Open in IMG/M
3300016341\|Ga0182035_11205294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300016371\|Ga0182034_11785274	Not Available	542	Open in IMG/M
3300016404\|Ga0182037_10503970	Not Available	1015	Open in IMG/M
3300016445\|Ga0182038_11710375	Not Available	567	Open in IMG/M
3300017656\|Ga0134112_10383998	Not Available	578	Open in IMG/M
3300017792\|Ga0163161_10956138	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300017997\|Ga0184610_1121916	Not Available	840	Open in IMG/M
3300018027\|Ga0184605_10533005	Not Available	508	Open in IMG/M
3300018056\|Ga0184623_10020989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	2896	Open in IMG/M
3300018063\|Ga0184637_10037077	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	2959	Open in IMG/M
3300018075\|Ga0184632_10161672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	988	Open in IMG/M
3300018082\|Ga0184639_10078972	Not Available	1727	Open in IMG/M
3300018465\|Ga0190269_11702422	Not Available	532	Open in IMG/M
3300019789\|Ga0137408_1354343	Not Available	2471	Open in IMG/M
3300020170\|Ga0179594_10053945	Not Available	1363	Open in IMG/M
3300021560\|Ga0126371_10745525	Not Available	1127	Open in IMG/M
3300021560\|Ga0126371_10930216	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1013	Open in IMG/M
3300025910\|Ga0207684_10953719	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300025922\|Ga0207646_11388271	Not Available	611	Open in IMG/M
3300025927\|Ga0207687_10874818	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300025961\|Ga0207712_11731168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	560	Open in IMG/M
3300025972\|Ga0207668_10349851	Not Available	1235	Open in IMG/M
3300026296\|Ga0209235_1153695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	909	Open in IMG/M
3300026301\|Ga0209238_1163067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	664	Open in IMG/M
3300026310\|Ga0209239_1338934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	524	Open in IMG/M
3300026361\|Ga0257176_1061338	Not Available	601	Open in IMG/M
3300027490\|Ga0209899_1025926	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300027511\|Ga0209843_1051441	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	727	Open in IMG/M
3300027577\|Ga0209874_1036782	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300027671\|Ga0209588_1007755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	3169	Open in IMG/M
3300027748\|Ga0209689_1043293	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300027846\|Ga0209180_10296665	Not Available	927	Open in IMG/M
3300027874\|Ga0209465_10010966	All Organisms → cellular organisms → Bacteria	4029	Open in IMG/M
3300027882\|Ga0209590_10863861	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300027961\|Ga0209853_1061805	Not Available	1012	Open in IMG/M
3300028381\|Ga0268264_10832679	Not Available	923	Open in IMG/M
3300028878\|Ga0307278_10404837	Not Available	599	Open in IMG/M
3300030554\|Ga0247640_1122255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica → Desulfobacula toluolica Tol2	623	Open in IMG/M
3300030904\|Ga0308198_1042522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → unclassified Paraburkholderia → Paraburkholderia sp. BL6665CI2N2	684	Open in IMG/M
3300031091\|Ga0308201_10094397	Not Available	851	Open in IMG/M
3300031545\|Ga0318541_10078814	Not Available	1740	Open in IMG/M
3300031547\|Ga0310887_10743607	Not Available	612	Open in IMG/M
3300031561\|Ga0318528_10417794	Not Available	720	Open in IMG/M
3300031564\|Ga0318573_10366254	Not Available	774	Open in IMG/M
3300031572\|Ga0318515_10445062	Not Available	693	Open in IMG/M
3300031720\|Ga0307469_11323878	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300031768\|Ga0318509_10845204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Rugamonas → Rugamonas aquatica	506	Open in IMG/M
3300031771\|Ga0318546_10079362	Not Available	2114	Open in IMG/M
3300031792\|Ga0318529_10604862	Not Available	509	Open in IMG/M
3300031820\|Ga0307473_11495190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	512	Open in IMG/M
3300031941\|Ga0310912_10565920	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	885	Open in IMG/M
3300032042\|Ga0318545_10124977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas urmiana	909	Open in IMG/M
3300032065\|Ga0318513_10615682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfonema	532	Open in IMG/M
3300032180\|Ga0307471_101024654	All Organisms → cellular organisms → Bacteria → Proteobacteria	992	Open in IMG/M
3300032180\|Ga0307471_102294495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	681	Open in IMG/M
3300034479\|Ga0314785_005210	Not Available	848	Open in IMG/M
3300034664\|Ga0314786_053747	Not Available	768	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.13%
Host-Associated	Host-Associated	13.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.02%
Plants	Host-Associated → Plants	13.87%
Aquatic	Environmental → Aquatic	5.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.11%
Sediment	Environmental → Aquatic → Sediment	4.38%
Freshwater	Environmental → Aquatic → Freshwater	0.73%
Roots	Host-Associated → Plants → Roots	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.30%
Loam	Environmental → Terrestrial → Soil → Loam	6.57%
Sand	Environmental → Terrestrial → Soil → Sand	5.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.30%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.84%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.11%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.46%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.73%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.73%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012375	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030554	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034479	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J37095_100484533	3300002562	Grasslands Soil	VRESTPQGKPIDVREEEDGRSERHPVMGWIGVEPRGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS*
JGI25382J43887_102289002	3300002908	Grasslands Soil	MGWIGVEPMGNITPRESALTSVWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVWRLQARMVKVVPEHVLDVT*
JGI25407J50210_100402853	3300003373	Tabebuia Heterophylla Rhizosphere	MEWIGVAPTGNMTPRESALTSIWSCITREFGQPPEERRQMTAVATLTGALSRRMTVRGLQARMVKVVSPYVFDV
Ga0066395_101255932	3300004633	Tropical Forest Soil	MEWIRVEPTGDITLRASVLTSIWSCITREFGQPPEERRQMTAVATLTGALSRRMTVRGLQARMVKVVSQSVFDVAAPRSARGVGKA*
Ga0066395_101900131	3300004633	Tropical Forest Soil	MGWIGVAPTGNITPRESGLTSIWSCITREFGQPPEERRQMTAVATLTGALSHRMMVRGLQARMVKVVSQPVFDVAAPRSARGVGKA*
Ga0066675_112520341	3300005187	Soil	RSEGPSVMEGIGVEPTGNITPRESALTSVWSCITRDLGQPLKERRQMTAVVTLTGALSHRMTVRGLQARMVKMVSQEVFDVAAPRSARGVGKA*
Ga0065704_102786522	3300005289	Switchgrass Rhizosphere	MEWIRVEPAGDITLRESVLTSIWSCLTREFGQPPEERRQMTAVVTLTGALSHRMTVRGLQARMVKVVSQPGFEVAAPRSARGVGKA*
Ga0068869_1010530092	3300005334	Miscanthus Rhizosphere	GRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVATLTGALSDRLTARRLQARMV*
Ga0070708_1008163962	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSRRTTVRGLQARMVKVVSQHVFDVASPRSARGVGKA*
Ga0066686_104542702	3300005446	Soil	VRAWEEGRSEGHPVIGWIGVEHTRKITPRESELTSIWSCITRDLGQPLKERKQMTAVATLTGALSARMTVWRLQARMVEVVPEHVLDVT*
Ga0066689_105568831	3300005447	Soil	VREEEDGRSERHLVMGWIGVEPMGNITPRESALTSVWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVWRLQARMVKVVPEHVLDVT*
Ga0070706_1003568611	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSRRTTVRGLQARMVKVVSQHVFDVASPRSARGVGKA*
Ga0066701_104990692	3300005552	Soil	ITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSHRITVRGLQARMVKVVSQHVLDVASPRSARGVGKA*
Ga0066692_109044021	3300005555	Soil	VREWEDGRSEGPSVMERIGVEPTGNSTPRESALTSVWSCITRDLGQPLKERRQMTAVVTLTGALSDRCTARRLQARMVKVVS*
Ga0066708_102900102	3300005576	Soil	VRVWEDGRSEGHSVMEWIRVEPTGDITLRESVLTSIWSGITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKVVSQPGVRRGTTAFRKER*
Ga0066905_1019470221	3300005713	Tropical Forest Soil	VREREDGRSEGHSVMGWIGVAPTGNITPRESGLTSIWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKVVSLPGVRRGTTAFRKER*
Ga0068861_1022255071	3300005719	Switchgrass Rhizosphere	VRVWEDGRSEGHSVMEWIRVEPAGDITLRESVLTSIWSCLTREFGQPPEERRQMTAVVTLTGALSHRMTVRGLQARMVKVVSQPGFEVAAPRSARGVGKA*
Ga0066903_1021451991	3300005764	Tropical Forest Soil	PQGKPIGVRAWEDGRSEGHSVMEWIGGTPTGNMTPRASGLTSIWSCITREVDQPPEERRQMTAVAPLTGALSDRLTARRLQARMVKVV*
Ga0075432_100906062	3300006058	Populus Rhizosphere	VREWEDGRSEGHLVIEWIGVEHPRNITPRESGLTSIWSCITREFGQPREERRQMTAVVTLTGALSDRFTVRRLQTRMVKVVS*
Ga0075425_1019600522	3300006854	Populus Rhizosphere	VRAWEDGRSEGHSVIEWIGVERPRNITPRESGLTSIWSCITREFGQPREERRQMTAVVTLTGALSDRFTVRRLQTRMVKVVS*
Ga0075424_1013368683	3300006904	Populus Rhizosphere	MGNSTPRESELTSIGSGITREFGQAPEERRQMTAVATLTGALSNRLTVRRPQTRMVKVVSQYVFDVASPRSARGVCQA*
Ga0099791_106724321	3300007255	Vadose Zone Soil	VREEEDGRSEGHPVMGWIGVKLIRNITPRASELTSVWSCITRDLGQPLEERKQMTVVATLTGALSDRMTVRRLQASMVNVVPEHVLDVALPLSARSVCKA*
Ga0099794_104631982	3300007265	Vadose Zone Soil	VREEEDGRSEGHPVMGWIGVKLIRNITPRASELTSVWSCITRDLGQPLEERKQMTVVATLTGALSDRMTVRRLQARMVKVVPEHVLDVA*
Ga0066710_1027138641	3300009012	Grasslands Soil	VRVWEDGRSEGHSVMEWIRVEPTGDITLRESVLTSIWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS
Ga0099829_113032112	3300009038	Vadose Zone Soil	VREEEDGRSERHPVMGWIGVEPMGNITPRESELTSVWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVRRLQARMVKVVPEHVLDVA*
Ga0099827_113305842	3300009090	Vadose Zone Soil	MEGIGVEPTGNITPRESALTSVWSCITRDLGQPLKERRQMTAVATLTGALSNRMTVRGLQARMVKVVSQHFDVASPRSARGVGKA*
Ga0099827_118640991	3300009090	Vadose Zone Soil	VREEEDGSSERHPVMGWIGVEPMGSITPRESELTSVWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVRRLQARMVKVVPEHVLDVA*
Ga0066709_1000709471	3300009137	Grasslands Soil	PTGVRVWEDGRSEGHSVMEWIRVEPTGDITLRESVLTSIWSGITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKVVSQPGVRRGTTAFRKER*
Ga0114129_105913973	3300009147	Populus Rhizosphere	MEWIRVEPTGDITLRESVLTSIWSCITREFGQPSEERKQMTAVATLTGALSHRMMVRGLQARMVKVVSQPVFDVAAPRSARGVGKA*
Ga0105249_102407824	3300009553	Switchgrass Rhizosphere	VRESKPQGKPIDVREEEDGRSERHPVMGWRGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVATLTGALSDRLTARRLQARMV*
Ga0105249_127236221	3300009553	Switchgrass Rhizosphere	VRAWEDGRSEGHSVMEWRGVEPTGDITLRESVLTSIWSCITREFGSPREERRQMTAVATLTGALSDRMTVRRLQARMVKVGPQPGVRRGTTAFRKER*
Ga0105249_127565632	3300009553	Switchgrass Rhizosphere	VRESKPQGKPIDVREEEDGRSECHPVMGWRGVEPTGNITPRESALTSVWSCITREFGQPPEERKQMTAVVTLTGALSHRRTVRGLQARMVKVVSQPVCDVAAPRSARGVGKA*
Ga0126374_100758562	3300009792	Tropical Forest Soil	MEWIRVEPTGDITLRASVLTSIWSCITREFGQPPEERRQMTAVATLTGALSRRMTVRGLQARMVKVVSQSVFDVAAPRSARGVSKA*
Ga0126374_114281251	3300009792	Tropical Forest Soil	VREGEDGRSEGHSVMGWIGVTPTGNITPRESALTSIWSCLTREFGQPPEERRQMTAVAILTGALSHRMTVPGLQARMVKVGPQPGIRRGTTAFRKER*
Ga0105061_10898182	3300009807	Groundwater Sand	VREEEDGRSEGHPVMGWRGVEPLCNITPRESVLTSVWSGITREFGQPREERKQMTAVATLTGELSDRIPVRRLQMRMVKVVPQHVFDVA*
Ga0105057_10982172	3300009813	Groundwater Sand	MGWIGVKRLRNITPRASELTSVWSCLTRDLGQPLEESKQMTVVATLTGALSDRMTVRRLQARMVKVVPAHGLDVA*
Ga0105068_10271612	3300009836	Groundwater Sand	VPIGVREEEDGRSEGHPVIGWIGVEPTGNIAPRESALTSVWSCVTRKLGQPLQERKQMTAVATLTGALSDRIPVRRLQVRMVKVVPQHVFDVA*
Ga0105074_10264021	3300010029	Groundwater Sand	VREEEDGRSERHPVMGRRGVEPTGDITPRESALTSVWSCVTRKLGQPLQERKQMTAVATLTGALSDRITGWRLQARMVQVVPAHVLDVAGPRSARSVCKA*
Ga0126315_104105931	3300010038	Serpentine Soil	MSPVREREPQGKLIDMREGEDGRSERHPVMGWRGVEPTGDITLRESALTSIWSCITREFGQPPEERKQMTAVATLTGALSHRLTVRGLQARMVKVVPE*
Ga0126380_110643562	3300010043	Tropical Forest Soil	VRESEPQGKPIDVREWEDGRSEGHPVMGWIRVEPTGDITLRESGLTSIWSCITREFGQPPEERRQMTAVATLTGALSHRMMVRGLQARMVKVVSQPVFDVAAPRSARGVGKA*
Ga0126384_109877872	3300010046	Tropical Forest Soil	MGNITPRESGQTSIWSCLTRDLGEPPGERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQHVLDVASPRSARGVGKA*
Ga0126384_111963191	3300010046	Tropical Forest Soil	VRESEPQGKPIDVREGEDGRSEGHPVMGWIGVEPTSNMTPRESGQTSIWSCITREFGQPREERRQMTAVATLTGALSHRMTVPGLQARMVKVGPQPGVGRGTTAFRKER*
Ga0126384_113693251	3300010046	Tropical Forest Soil	VRESEPQGKPIDVREWEDGRSEGHPVMGWIRVEPTGDITLRESGLTSIWSCITREFGQPSEERRQMTAVVTLTGALSDRLTARRLQARMVKVVSLPGVRR
Ga0126382_115430071	3300010047	Tropical Forest Soil	VRESEPQGKPIDVREWEDGRSEGHPVMGWIRVEPTGDITLRESGLTSIWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKVVSLPGVRRGTTAFRKER*
Ga0127497_11378942	3300010109	Grasslands Soil	VRESKPQGQPIDVREEEDGRSERHPVMGWIGVEPRGDITPRESALTSVWSCITRDLGQPHKERKQMTAVATLTGALSNRMTVWRLQARMVKVVPEHVLDVP*
Ga0127452_11467681	3300010119	Grasslands Soil	MEWIRVEPTGDITLRASVLTSIWSCITREFGHPPEERRQMTAVVTLTGALSHRITVRGLQARMVKVVSQHVLDVASPRSARGVGKA*
Ga0126321_11049892	3300010145	Soil	VRESEPQGKPIDVREWEDGRSEGHSVMGWIGVEPTGDITLRESALTSIWSCITREFGQAPEERRQMTAVATLTGALSHRMTVPGLQARMVKVGPQPGVGRGTTAFRKER*
Ga0126370_113116992	3300010358	Tropical Forest Soil	DITLRESVLTSIWSCITREFGQPPEERRQMTAVATLTGALSRRMTVRGLQARMVKVMSQSVFDVAAPRSARGVGKA*
Ga0126372_127810071	3300010360	Tropical Forest Soil	MEWIRVEPTGDITLRESVLTSIWSCLTREVGQPSEERKQMTAVATLTGALSHRMMVRGLQARMVKVVSQPVFDVAAPRSARGVGKA*
Ga0126378_113085971	3300010361	Tropical Forest Soil	VREWEDGRSEGHSVIEWIGVEHPRNITPRESGLTSIWSCITREFGQPREERRQMTAVVTLTGALSDRFTVRRLQTRMVKVVS*
Ga0126378_114939571	3300010361	Tropical Forest Soil	VREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCLTREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKV
Ga0126379_112336751	3300010366	Tropical Forest Soil	MEWIRVEPTGDITLRESVLTSIWSGITREFGQPPEERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQPVCDVAAPRSARGVCQA*
Ga0126379_129478111	3300010366	Tropical Forest Soil	MGWIGVAPTGNITPRESALTSVWSCLTRDLGQPLKERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQHVLDVTSPRSARGVGKA*
Ga0105239_106535151	3300010375	Corn Rhizosphere	PRTSPVRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVATLTGALSDRLTARRLQARMV*
Ga0137393_106210952	3300011271	Vadose Zone Soil	VREEEDGSSERHPVMGWIGVEPTGNIAPRESALTSVWSCVTRKLGQPLQERKQMTAVATLTGALSDRIPVRRLQVRMVKVVPQHVFDVA*
Ga0137388_101428132	3300012189	Vadose Zone Soil	VPIGVREWEDGRSEGHPVIGWIGVEPLCNITPRESVLTSVWSCITREFGQPREERKQMTAVATLTGALSHRMTVRRLQVRMVKVVPQYVFDVA*
Ga0137363_106573602	3300012202	Vadose Zone Soil	VREEEEGRSQGHPVMGWIGVKLLRNITPRASELTSVWSCLTRDLGQPLEERKQMTVVATLTGALSDRMTVRRLQARMVKVVPEHVLDVA*
Ga0137374_100305508	3300012204	Vadose Zone Soil	VKRLRNITPRASELTSVWSCLTRDLGQPLEERKQMTAVATLTGALSDRMTVRRLQARMVKVVPAHVLDVARPRSARSVCKA*
Ga0137362_117326872	3300012205	Vadose Zone Soil	MGWIGVAPTGNITPRASGLTSIWSCITREFGQPREERKQMTAVATLTGALSDRRTGWRLQARMVKVVSDVLDMA*
Ga0137381_113209101	3300012207	Vadose Zone Soil	IWSCITRDLGQPPEERRQMTAVVTLTGALSHRMTVRGLQARMVKVVSRHIFDVAAPRSARGVGKA*
Ga0137379_102320112	3300012209	Vadose Zone Soil	MSPARESEPQGKPIDVRAWEEGRSERHPVMGWIGGAPTGNMTPRASGLTSLWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVWRLQARMVKVVPEHVLDVT*
Ga0137379_113459281	3300012209	Vadose Zone Soil	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS*
Ga0137387_109752401	3300012349	Vadose Zone Soil	VRESTPQGKPIDVREEEDGRSERHPVMGWIGVEPRGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKVVS*
Ga0137375_101293791	3300012360	Vadose Zone Soil	VRVKRLRNITPRASELTSVWSCLTRDLGQPLEERKQMTAVATLTGALSDRMTVRRLQARMVKVVPAHVLDVARPRSARSVCKA*
Ga0137360_115336321	3300012361	Vadose Zone Soil	MGWIGVEPLGNITPRASALTSVWSCITRDLGQPLKERKQMTAVATLTGALSDRMTVWRLQARMVKVVSDVLDMA*
Ga0137361_105846952	3300012362	Vadose Zone Soil	MGWIGVAPTGNITPRASGLTSIWSCITRDLGQPPEERKQMTAVATLTGALSNQMTVRELQARMVKVVSQHVLDGASPRSARGVGKA*
Ga0137390_107100771	3300012363	Vadose Zone Soil	VRESKPQGKPIDVRGEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERKQMTAVVTLTGALSDRLPVRRLQARMVKVVPQHV
Ga0134034_12555111	3300012375	Grasslands Soil	VRESTPQGKPIDVREEEDGRSECHPVMGWIGVEPTGDITLRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKVVSQPGVRRGTTAFRKER*
Ga0134043_11483161	3300012392	Grasslands Soil	PPARESEPQGKPIGVREEEDGRSECHPVMGWIGVAPTSNMTPRASGLTSVWSCITRDLGQPPKERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQHVFDVASPRSARGVGKA*
Ga0134051_13754221	3300012398	Grasslands Soil	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPRGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS*
Ga0134048_11572212	3300012400	Grasslands Soil	VRESKPQGQPIDVREEEDGRSERHPVMGWIGVEPRGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS*
Ga0137395_100503753	3300012917	Vadose Zone Soil	VREWEDGRSEGHPVIGWIGVEHTRNITPRESELTSIWSCITRDLGQPLKERKQMTAVATLTGALSARMTVWRLQARMVEVVPE*
Ga0137395_109049651	3300012917	Vadose Zone Soil	TWEPRTSPARESKPYGKPIDVRAWEEGRSEGHSVMEWIRVEPTGDITLRESVLTSIWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS*
Ga0137359_103963162	3300012923	Vadose Zone Soil	MEWIRVEPTGDITLGESVLTSIWSCITREFGQPPEERKQMTVVATLTGALSLRLTVRGLQARMVKGVSQQVFDVASPRSARGVGKA*
Ga0137404_101555861	3300012929	Vadose Zone Soil	VRESTPQGKLIDVREEEDGRSERHPVMGWRGVEPTGDITPRESALTSVWSCITRECGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS*
Ga0126375_109110911	3300012948	Tropical Forest Soil	VRESEPQGKPIDVREWEDGRSEGHPVMGWIRVEPTGDITLRESGLTSIWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKVVSQPGV
Ga0126369_114041731	3300012971	Tropical Forest Soil	VRAWEDGRSEGHSVIEWIGVEHPRNITPRASGLTSIWSCLTREFGQPREERRQMTAVVTLTGALSDRFTVRRLQTRMVKVVS*
Ga0163162_112554512	3300013306	Switchgrass Rhizosphere	VRVWEDGRSEGHSVMEWIRVEPAGDITLRESVLTSIWSCLTREFGQPPEERRQMTAVVTLSGALSHRMTVRGLQARMVKVVSQPGFEVAAPRSARGVGKA*
Ga0163162_120560091	3300013306	Switchgrass Rhizosphere	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVATLTGALSDRLTARRLQARMV*
Ga0134075_105717401	3300014154	Grasslands Soil	MERIGVEPTGNSTPRESALTSVWSCITRDLGQPLKERRQMTAVATLTGALSARMTVWRLQARMVKVVSDVLDMA*
Ga0182035_112052941	3300016341	Soil	EDGRSEGHPVMGWIGVAPTGNITPRESALTSVWSCLTRDLRQPLKERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQHVLDVTSPRSARGVGKA
Ga0182034_117852741	3300016371	Soil	GKPIGVRAGEDGRSEGHPVMGWIGVAPTGNITPRESALTSVWSCLTRDLGQPLKERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQHVLDVTSPRSARGVGKA
Ga0182037_105039702	3300016404	Soil	EDGRSEGHPVMGWIGVEPTGDITLRESALTSIWSCITREFGQPPEERKQMTAVATLTGALSHRLTVRGLQARMVKGVSQHVLDVTSPRSARGVGKA
Ga0182038_117103751	3300016445	Soil	GEDGRSEGHPVMGWIGVAPTGNITPRESALTSVWSCLTRDLGQPLKERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQHVLDVTSPRSARGVGKA
Ga0134112_103839981	3300017656	Grasslands Soil	RHPVMGWRGVEPMGNITPRESALTSVWSCITRDLGQPHKERKQMTAVATLTGALSNRMTVWRLQARMVKVVPEHVLDVP
Ga0163161_109561382	3300017792	Switchgrass Rhizosphere	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVATLTGALSDRLTARRLQARMV
Ga0184610_11219161	3300017997	Groundwater Sediment	GVEPLRNITPRESVLTSVWSCITREFGQPREERKQMTAVATLTGALSDRLTVRRLQARMVKGVPQHVLDVAPPRSARGVCKA
Ga0184605_105330051	3300018027	Groundwater Sediment	TWEPRTSPARGSEPQGKPIGVREREDGRSERHPVMGWRGVEPLGNITPRASALTSVWSCITRDLGQPLKERKQMTAVATLTGALSDRMTVWRPQARMGKVVPEHVLDVA
Ga0184623_100209891	3300018056	Groundwater Sediment	VREEEDGRSERHPVMGWIGVEPLRNITPRESVLTSVWSCITREFGQPREERKQMTAVATLTGALSHRMTVRRLQVRMVKVVPE
Ga0184637_100370774	3300018063	Groundwater Sediment	MGWIGVEPTCNITPRESELTSVWSCLTRDLGQPLEERRQMTAVATLTGALSDRMTVRRLQARMVKVVPEHVLDVA
Ga0184632_101616722	3300018075	Groundwater Sediment	VREEEDGRSERHPVMGWIGVEPLRNITPRESVLTSVWSCITREFGQPREERKQMTAVATLTGALSHRMTVRRLQVRMVKVVPEYVAPPRSARSVGKA
Ga0184639_100789722	3300018082	Groundwater Sediment	MGWRGVEPLRTITPRASELTSVWSGITRARGQPLEEGKQMPAVATLPGALSNRMTVRRLQARMVKVVPEPVLAVAPSRSARSVCKA
Ga0190269_117024221	3300018465	Soil	PRTPPARESEPQGKPIGVREEEDGRSERHPVMGWIGVAPTGNMTPRASGQTSIWSCITRDLGQPPKERRQMTAVVTLTGALSHRMTVRRLQARMVKVVPEHVLDVA
Ga0137408_13543433	3300019789	Vadose Zone Soil	MEPRTSPVRESTPQGKLIDVREEEDGRSERHPVMGWRGVEPTGDITPRASALTSVWSCITRECGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS
Ga0179594_100539451	3300020170	Vadose Zone Soil	VRESTPQGKLIDVREEEDGRSERHPVMGWRGVEPTGDITPRESALTSVWSCITRECGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS
Ga0126371_107455253	3300021560	Tropical Forest Soil	MGWIGVAPTGNITPRESALTSVWSCLTRDLGQPLKERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQHVLDVTSPRSARGVGKA
Ga0126371_109302161	3300021560	Tropical Forest Soil	MEWIRVEPTGDITLRASVLTSIWSCITREFGQPPEERRQMTAVATLTGALSRRMTVRGLQARMVKVVSQSVFDVAAPRSARGVGKA
Ga0207684_109537191	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSRRTTVRGLQARMVKVVSQHVFDVASPRSARSVGKA
Ga0207646_113882711	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GRSECHPVMGWRGVEPLHNITPRASELTSVWSCLTRDLGHLLEERKPMTAVATLTGALAHRMTGRRLQARMVKVVPEHMLDVARSRSARSVGKA
Ga0207687_108748181	3300025927	Miscanthus Rhizosphere	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSHRMTVRGLQARMVKVVSQPGFEVAAPRSARGVGKA
Ga0207712_117311682	3300025961	Switchgrass Rhizosphere	VRESKPQGKPIDVREEEDGRSECHPVMGWRGVEPTGNITPRESALTSVWSCITREFGQPPEERKQMTAVVTLTGALSHRRTVRGLQARMVKVVSQPVCDVAAPRSARGVGKA
Ga0207668_103498512	3300025972	Switchgrass Rhizosphere	MEWIRVEPAGDITLRESVLTSIWSCLTREFGQPPEERRQMTAVVTLTGALSHRMTVRGLQARMVKVVSQPGFEVAAPRSARGVGKA
Ga0209235_11536952	3300026296	Grasslands Soil	MGWIGVEPMGNITPRESALTSVWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVWRLQARMVKVVPEHVLDVT
Ga0209238_11630672	3300026301	Grasslands Soil	VREEEDGRSERHPVMGWIGVEPMGNITPRESALTSVWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVWRLQARMVKVVPEHVLDVT
Ga0209239_13389342	3300026310	Grasslands Soil	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPMGNITPRESALTSVWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVWRLQARMVKVVPEHVLDVT
Ga0257176_10613382	3300026361	Soil	MGWIGVEPLRNITPRESVLTSVWSCITREFGQPPEERKQMTVVATLTGALSHRMTVRGLQARMVKVVSRHIFDVAAPRSARGVGKA
Ga0209899_10259262	3300027490	Groundwater Sand	VPIGVREEEDGRSEGHPVIGWIGVEPTGNIAPRESALTSVWSCVTRKLGQPLQERKQMTAVATLTGALSDRIPGRRLQVRMVKVVPQHVFDVA
Ga0209843_10514412	3300027511	Groundwater Sand	VREWEDGRSEGHPVIGWIGVEPTGNIAPRESALTSVWSCVTRKLGQPLQERKQMTAVATLTGALSDRIPVRRLQVRMVKVVPQHVFDVA
Ga0209874_10367822	3300027577	Groundwater Sand	MGWIGVKRLRHITPRASELTSVWSCLTSDLGQPLEESKPLTVVATLTGALSDRMTVRRLQARMVKVVPAHGLDVA
Ga0209588_10077551	3300027671	Vadose Zone Soil	MGWIGVEHTRNITPRESALTSVWSCITRDLGQPLQERRQMTVVATLTGALSDRLPVRRLQARMVKVVPQHVLDVAPSRSARSVCKA
Ga0209689_10432935	3300027748	Soil	DITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKVVPQHVLDVVPPRSARGVGKA
Ga0209180_102966651	3300027846	Vadose Zone Soil	LSPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSHRITVRGLQARMVKVVSQHVLDVASPRSARGVGKA
Ga0209465_100109665	3300027874	Tropical Forest Soil	MEWIRVEPTGDITLRESVLTSIWSGITREFGQPPEERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQPVCDVAAPRSARGVCQA
Ga0209590_108638611	3300027882	Vadose Zone Soil	MGWIGVEPMGSITPRESELTSVWSCITRDLGQPLEERRQMTAVATLTGALSDRMTVRRLQARMVKVVPEHVLDVA
Ga0209853_10618052	3300027961	Groundwater Sand	VPIGVREWEDGRSEGHPVIGWIGVEPTGNIAPRESALTSVWSCVTRKLGQPLQERKQMTAVATLTGALSDRIPVRRLQVRMVKVVPQHVFDVA
Ga0268264_108326792	3300028381	Switchgrass Rhizosphere	VRVWEDGRSEGHSVMEWIRVEPAGDITLRESVLTSIWSCLTREFGQPPEERRQMTAVVTLTGALSHRMTVRGLQARMVKVVSQPGFEVAAPRSARGVGKA
Ga0307278_104048371	3300028878	Soil	EGHPVIGWIGVEPTGNIAPRESALTSVWSCVTRKLGQPLEERKQMTAVATLTGALSNRIPGRRLQVRMVKVVPQHVFDVA
Ga0247640_11222551	3300030554	Soil	VREEEDGRSERHPVMGWIGVEPTGDITLRESALTSIWSCLTREFGQPREERRQMTAVATLTGALSHRMTVPGLQARMVKVVLDSWHDRVP
Ga0308198_10425221	3300030904	Soil	VREEEDGRSERHPVMGWIGVAPTGNMTPRASGQTSIWSCITREFGQPREERRQMTAVATLTGALSHRMTVRGLQARMVKVVSRHIFDVAAPRSARGVGKA
Ga0308201_100943971	3300031091	Soil	VRESTPQGKLIDVREEEDGRSERHPAMGWIGVEPTGDITPRASALTSVWSCITRDLGQPLKERRQMTAVVTLTGALSDRMTVWRLQARMVKVVA
Ga0318541_100788141	3300031545	Soil	ALTSIWSCITREFGQPPEERRQMTAVATLTGALSHRLTVRGLQARMVKGVSQHVLDVTSPRSARGVGKA
Ga0310887_107436071	3300031547	Soil	VREWEDGRSEGHLVIEWIGVEHPRNITPRESGLTSIWSCITREFGQPREERRQMTAVVTLTGALSDRFTVRRLQTRMVKVVS
Ga0318528_104177941	3300031561	Soil	MGWIGVEPTGDITLRESALTSIWSCITREFGQPPEERRQMTAVATLTGALSHRLTVRGLQARMVKGVSQHVLDVTSPRSARGVGKA
Ga0318573_103662541	3300031564	Soil	MGWIGVEPTGDITLRESALTSIWSCITREFGQPPEERRQMTAVATLTGALSHRMTVRGLQARMVKVVSQHVLDVTSPRSARGVGKA
Ga0318515_104450622	3300031572	Soil	MGWIGVEPTGDITLRESVLTSIWSCLTREFGQPPEERRQMTAVVTRTGALSHRMTVRGLQARMVKVVSQHVFDVASPRSARGVCKA
Ga0307469_113238781	3300031720	Hardwood Forest Soil	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCLTREFGQPSEERRQMTAVVTLTGALSDRFTARRLQARMVKGVS
Ga0318509_108452041	3300031768	Soil	MEWIRVEPTGDMTLRESVLTSIWSCITREFGQPPEERRQMTAVATLTGALSHRLTVRGLQARMVKGVSQHVLDVTSPRSARGVGKA
Ga0318546_100793622	3300031771	Soil	MGWIGVEPTGDITLRESALTSIWSCITREFGQPPEERRQMTAVATLTGALSHRLTVRGLQARMVKVVPEYGVASPRSVRGVGKA
Ga0318529_106048621	3300031792	Soil	VMEWIRVEPTGDITLRESVLTSIWSCITREFGQPPEERRQMTAVATLTGALSHRRTVRGLQACMVKVVSQHVLDVTSPRSARGVGKA
Ga0307473_114951901	3300031820	Hardwood Forest Soil	VREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS
Ga0310912_105659202	3300031941	Soil	MGWIGVAPTGNMTPRESVLTSIWSCLTREFGQPPEERRQMTAVVTRTGALSHRMTVRGLQARMVKVVSRHILDVAAPRSARGVGKA
Ga0318545_101249771	3300032042	Soil	MGWIGVAPTGDIALRESALTSIWSCITREFGQPPEERRQMTAVATLTGALSHRLTVRGLQARMVKGVSQHVLDVTSPRSARGVGKA
Ga0318513_106156821	3300032065	Soil	PRTSPVRESEPQGKPIDVRAWEDGRSERHPVMGWIGVAPTGNMTPRESVLTSIWSCLTREFGQPPEERRQMTAVVTRTGALSHRMTVRGLQARMVKVVSRHIFDVAAPRSARGVGKA
Ga0307471_1010246541	3300032180	Hardwood Forest Soil	VRESKPQGKPIDVREEEDGRSERHPVMGWIGVEPTGDITPRESALTSVWSCITREFGQPPEERRQMTAVVTLTGALSDRLTARRLQARMVKGVS
Ga0307471_1022944951	3300032180	Hardwood Forest Soil	MRESEPQGKPIDVREWEDGRSEGHPVMGWIGVEHTRNITPRESVLTSVWSCITRDLGQPLQERRQMTVVATLTGALSDRLPVRRLQARMVKVVPQHVLGVAPSRSARSVCKA
Ga0314785_005210_540_788	3300034479	Soil	VREWEDGRSEGHSVIEWIGVEHPRNITPRESGLTSIWSCITREFGQPREERRQMTAVVTLTGALSDRFTVRRLQTRMVKVVS
Ga0314786_053747_1_255	3300034664	Soil	MEWIRVEPAGDITLRESVLTSIWSCLTREFGQPPEERRQMTAVVTLTGALSHRMTVRGLQARMVKVVSQPGFEVAAPRSARGVGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056381

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences