Metagenome Family F056371

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056371
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	50 residues
Representative Sequence	MAGDIVVIEADPWDPSDVTVEMLQSLVDGGLLRPVTDPNRPEWIAPSGEPE
Number of Associated Samples	69
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	15.79 %
% of genes near scaffold ends (potentially truncated)	86.86 %
% of genes from short scaffolds (< 2000 bps)	97.08 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (91.241 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (92.701 % of family members)
Environment Ontology (ENVO)	Unclassified (92.701 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (92.701 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.39% β-sheet: 0.00% Coil/Unstructured: 88.61%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF04195	Transposase_28	7.30

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
All Organisms	root	All Organisms	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
cellular organisms	root	All Organisms → cellular organisms	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	8.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Tripsacinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae	8.03 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Zea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea	8.03 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.24 %
Zea mays	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	8.03 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005840\|Ga0068870_10994792	Not Available	598	Open in IMG/M
3300006881\|Ga0068865_102211068	Not Available	501	Open in IMG/M
3300009148\|Ga0105243_12487208	Not Available	557	Open in IMG/M
3300013296\|Ga0157374_12248414	Not Available	572	Open in IMG/M
3300013297\|Ga0157378_12874836	Not Available	534	Open in IMG/M
3300014969\|Ga0157376_12053204	Not Available	610	Open in IMG/M
3300015267\|Ga0182122_1023498	Not Available	686	Open in IMG/M
3300015267\|Ga0182122_1050377	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	558	Open in IMG/M
3300015268\|Ga0182154_1033126	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	629	Open in IMG/M
3300015269\|Ga0182113_1066251	Not Available	567	Open in IMG/M
3300015274\|Ga0182188_1052238	Not Available	528	Open in IMG/M
3300015276\|Ga0182170_1045498	Not Available	588	Open in IMG/M
3300015277\|Ga0182128_1025721	Not Available	693	Open in IMG/M
3300015279\|Ga0182174_1015044	Not Available	821	Open in IMG/M
3300015279\|Ga0182174_1026898	Not Available	703	Open in IMG/M
3300015281\|Ga0182160_1044611	Not Available	605	Open in IMG/M
3300015281\|Ga0182160_1052054	Not Available	579	Open in IMG/M
3300015281\|Ga0182160_1062215	Not Available	550	Open in IMG/M
3300015282\|Ga0182124_1059978	Not Available	553	Open in IMG/M
3300015282\|Ga0182124_1061711	Not Available	548	Open in IMG/M
3300015285\|Ga0182186_1016129	Not Available	805	Open in IMG/M
3300015287\|Ga0182171_1017624	Not Available	792	Open in IMG/M
3300015288\|Ga0182173_1015138	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	817	Open in IMG/M
3300015288\|Ga0182173_1031410	Not Available	673	Open in IMG/M
3300015288\|Ga0182173_1043158	Not Available	616	Open in IMG/M
3300015288\|Ga0182173_1047934	Not Available	598	Open in IMG/M
3300015288\|Ga0182173_1082263	Not Available	510	Open in IMG/M
3300015289\|Ga0182138_1010750	Not Available	910	Open in IMG/M
3300015291\|Ga0182125_1040650	Not Available	645	Open in IMG/M
3300015291\|Ga0182125_1094564	Not Available	502	Open in IMG/M
3300015292\|Ga0182141_1077356	Not Available	534	Open in IMG/M
3300015294\|Ga0182126_1015929	Not Available	842	Open in IMG/M
3300015294\|Ga0182126_1026756	Not Available	730	Open in IMG/M
3300015295\|Ga0182175_1080573	Not Available	535	Open in IMG/M
3300015296\|Ga0182157_1067326	Not Available	574	Open in IMG/M
3300015296\|Ga0182157_1093182	Not Available	519	Open in IMG/M
3300015298\|Ga0182106_1016333	Not Available	864	Open in IMG/M
3300015298\|Ga0182106_1026798	Not Available	749	Open in IMG/M
3300015298\|Ga0182106_1082736	Not Available	538	Open in IMG/M
3300015299\|Ga0182107_1014389	Not Available	894	Open in IMG/M
3300015299\|Ga0182107_1056344	Not Available	608	Open in IMG/M
3300015299\|Ga0182107_1077007	Not Available	553	Open in IMG/M
3300015299\|Ga0182107_1104772	Not Available	502	Open in IMG/M
3300015300\|Ga0182108_1014011	Not Available	911	Open in IMG/M
3300015300\|Ga0182108_1031528	Not Available	725	Open in IMG/M
3300015300\|Ga0182108_1049897	Not Available	635	Open in IMG/M
3300015302\|Ga0182143_1082372	Not Available	541	Open in IMG/M
3300015302\|Ga0182143_1083315	Not Available	539	Open in IMG/M
3300015303\|Ga0182123_1010714	Not Available	931	Open in IMG/M
3300015303\|Ga0182123_1031906	Not Available	695	Open in IMG/M
3300015304\|Ga0182112_1021526	Not Available	801	Open in IMG/M
3300015304\|Ga0182112_1046937	Not Available	642	Open in IMG/M
3300015305\|Ga0182158_1061067	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	593	Open in IMG/M
3300015305\|Ga0182158_1077189	Not Available	552	Open in IMG/M
3300015305\|Ga0182158_1079266	Not Available	548	Open in IMG/M
3300015305\|Ga0182158_1102734	Not Available	505	Open in IMG/M
3300015307\|Ga0182144_1065005	Not Available	590	Open in IMG/M
3300015307\|Ga0182144_1078979	Not Available	556	Open in IMG/M
3300015307\|Ga0182144_1107926	Not Available	503	Open in IMG/M
3300015308\|Ga0182142_1052567	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	640	Open in IMG/M
3300015314\|Ga0182140_1033066	Not Available	733	Open in IMG/M
3300015314\|Ga0182140_1108415	Not Available	513	Open in IMG/M
3300015322\|Ga0182110_1020258	Not Available	866	Open in IMG/M
3300015322\|Ga0182110_1058689	Not Available	636	Open in IMG/M
3300015322\|Ga0182110_1092469	Not Available	553	Open in IMG/M
3300015322\|Ga0182110_1118803	Not Available	510	Open in IMG/M
3300015322\|Ga0182110_1126033	Not Available	500	Open in IMG/M
3300015323\|Ga0182129_1092948	Not Available	539	Open in IMG/M
3300015341\|Ga0182187_1182485	Not Available	520	Open in IMG/M
3300015342\|Ga0182109_1175778	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	551	Open in IMG/M
3300015342\|Ga0182109_1203302	Not Available	521	Open in IMG/M
3300015343\|Ga0182155_1094163	Not Available	690	Open in IMG/M
3300015343\|Ga0182155_1115084	Not Available	644	Open in IMG/M
3300015343\|Ga0182155_1147208	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	589	Open in IMG/M
3300015344\|Ga0182189_1150703	Not Available	590	Open in IMG/M
3300015344\|Ga0182189_1178373	Not Available	554	Open in IMG/M
3300015345\|Ga0182111_1136794	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	630	Open in IMG/M
3300015345\|Ga0182111_1173779	Not Available	575	Open in IMG/M
3300015345\|Ga0182111_1227146	Not Available	517	Open in IMG/M
3300015346\|Ga0182139_1105570	Not Available	695	Open in IMG/M
3300015346\|Ga0182139_1215377	Not Available	529	Open in IMG/M
3300015351\|Ga0182161_1128606	Not Available	673	Open in IMG/M
3300015351\|Ga0182161_1222622	Not Available	541	Open in IMG/M
3300015351\|Ga0182161_1233684	Not Available	531	Open in IMG/M
3300015355\|Ga0182159_1275848	Not Available	559	Open in IMG/M
3300015355\|Ga0182159_1319208	Not Available	524	Open in IMG/M
3300015361\|Ga0182145_1053166	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	774	Open in IMG/M
3300015361\|Ga0182145_1118099	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	595	Open in IMG/M
3300017404\|Ga0182203_1161823	Not Available	504	Open in IMG/M
3300017409\|Ga0182204_1081902	Not Available	566	Open in IMG/M
3300017410\|Ga0182207_1111961	Not Available	588	Open in IMG/M
3300017410\|Ga0182207_1126711	Not Available	563	Open in IMG/M
3300017411\|Ga0182208_1029359	Not Available	788	Open in IMG/M
3300017413\|Ga0182222_1037097	Not Available	664	Open in IMG/M
3300017413\|Ga0182222_1059651	Not Available	588	Open in IMG/M
3300017415\|Ga0182202_1104019	Not Available	553	Open in IMG/M
3300017415\|Ga0182202_1132138	Not Available	511	Open in IMG/M
3300017420\|Ga0182228_1053548	Not Available	695	Open in IMG/M
3300017420\|Ga0182228_1077076	Not Available	607	Open in IMG/M
3300017420\|Ga0182228_1079232	Not Available	600	Open in IMG/M
3300017420\|Ga0182228_1100695	Not Available	551	Open in IMG/M
3300017424\|Ga0182219_1038008	Not Available	754	Open in IMG/M
3300017424\|Ga0182219_1060465	Not Available	653	Open in IMG/M
3300017424\|Ga0182219_1092432	Not Available	574	Open in IMG/M
3300017424\|Ga0182219_1124301	Not Available	522	Open in IMG/M
3300017430\|Ga0182192_1068599	Not Available	693	Open in IMG/M
3300017430\|Ga0182192_1087971	Not Available	636	Open in IMG/M
3300017433\|Ga0182206_1089324	Not Available	606	Open in IMG/M
3300017436\|Ga0182209_1106264	Not Available	590	Open in IMG/M
3300017436\|Ga0182209_1123969	Not Available	562	Open in IMG/M
3300017438\|Ga0182191_1082786	Not Available	656	Open in IMG/M
3300017438\|Ga0182191_1126925	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	570	Open in IMG/M
3300017438\|Ga0182191_1164542	Not Available	521	Open in IMG/M
3300017438\|Ga0182191_1173950	Not Available	511	Open in IMG/M
3300017442\|Ga0182221_1080124	Not Available	636	Open in IMG/M
3300017442\|Ga0182221_1111801	Not Available	574	Open in IMG/M
3300017442\|Ga0182221_1113574	Not Available	571	Open in IMG/M
3300017443\|Ga0182193_1197475	Not Available	502	Open in IMG/M
3300017680\|Ga0182233_1050861	Not Available	732	Open in IMG/M
3300017680\|Ga0182233_1106984	Not Available	520	Open in IMG/M
3300017683\|Ga0182218_1115443	Not Available	550	Open in IMG/M
3300017683\|Ga0182218_1136677	Not Available	521	Open in IMG/M
3300017683\|Ga0182218_1149819	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Tripsacinae → Zea → Zea mays	506	Open in IMG/M
3300017684\|Ga0182225_1042745	Not Available	733	Open in IMG/M
3300017684\|Ga0182225_1097098	Not Available	569	Open in IMG/M
3300017684\|Ga0182225_1124834	Not Available	527	Open in IMG/M
3300017686\|Ga0182205_1066998	Not Available	689	Open in IMG/M
3300017689\|Ga0182231_1082317	Not Available	614	Open in IMG/M
3300017690\|Ga0182223_1092564	Not Available	546	Open in IMG/M
3300025942\|Ga0207689_11515069	Not Available	560	Open in IMG/M
3300025942\|Ga0207689_11618296	Not Available	538	Open in IMG/M
3300025960\|Ga0207651_10827985	Not Available	822	Open in IMG/M
3300026089\|Ga0207648_11604205	Not Available	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	92.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.65%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	92.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	92.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	92.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015288	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017689	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068870_109947922	3300005840	Miscanthus Rhizosphere	MAGGPPVILPADPWEPSDVSVEVLQSLVDDGLLRPVTDPDRPEWIAPLGEPEPRP
Ga0068865_1022110682	3300006881	Miscanthus Rhizosphere	MAGDIIVIKVDPWGPSDVTMEMLQSLVDGGLLRPVTNPNRPEWIALLGELEPRPHDGYVV
Ga0105243_124872081	3300009148	Miscanthus Rhizosphere	MAGGPVILQADPWGPSDVTAEMLQSLVDGGLLRPVTDPNRPEWITLSGEPELRPRDGYVM
Ga0157374_122484141	3300013296	Miscanthus Rhizosphere	MAGDIVVIEADPWDPSDVTVEMLQSLVDDGLLCPVTDPNRPEWIAPSGEPE
Ga0157378_128748361	3300013297	Miscanthus Rhizosphere	MAGGAVVIQADPWGPSDVSAETLQSLVDDGLLRPVTDPNRLEWIAPGSRS*
Ga0157376_120532041	3300014969	Miscanthus Rhizosphere	MAGDIVVIEADPWDPSDVTVEMLQSLVDGGLLRPVTDPNRPEWIAPLGEPELRPRDGY
Ga0182122_10234982	3300015267	Miscanthus Phyllosphere	MAGDIVVIEVDPWDPSNVTVETLESLVDGGLLRPVMDPNRPEW
Ga0182122_10503771	3300015267	Miscanthus Phyllosphere	MAGGAVVLQADPWDPSDVSAAMLQSLVDDSLLRLVTDPNRPEWIAPGN*
Ga0182154_10331261	3300015268	Miscanthus Phyllosphere	APMAGTVVVEADSWGQSDVIVEMLQSLIDGGLLRPVTDPNRPEWIAPSGEPEPRHTMATS
Ga0182113_10662511	3300015269	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQSLIDGRLLRPVTDPNRPEWITPLGEPELRPRDGYVVSFVS
Ga0182188_10522381	3300015274	Miscanthus Phyllosphere	MAGGPPVILPADPWGPSDVSVETLQSLVDDGFLRPITDPDRPDWIAPLGEP
Ga0182170_10454981	3300015276	Miscanthus Phyllosphere	MAGAVVVEVDSWGQSDVIVETLQSLVDGGLLPPVTDPNRPEWIAPSGEL
Ga0182128_10257212	3300015277	Miscanthus Phyllosphere	MASDIVVIEVDPWDPSDVTVEMLQSLIDGGLLRSVTDPNRPEWIAPLGEPEPR
Ga0182174_10150441	3300015279	Miscanthus Phyllosphere	MAGAVVIEVDPWGQSDVSVEMLQSLVDDGLLHPVTDPNRPEWIAPSGEPEPRPYDGYVV
Ga0182174_10268981	3300015279	Miscanthus Phyllosphere	MAGGPPVILPVDPWEPSDVSVEVLQSLVDDDLLRSITDPDRLEW
Ga0182160_10446111	3300015281	Miscanthus Phyllosphere	MAGDIVVVEADPWDPSDVTEEMLQSLVDGGLLHPVTDSTRPEWIAPY
Ga0182160_10520541	3300015281	Miscanthus Phyllosphere	MAGDIVVVEADPWDPSDITEEMLQSLVDGGLLRPVTDSARLEWIAPCG
Ga0182160_10622151	3300015281	Miscanthus Phyllosphere	MAGDIFVIEADPWDPSDVSVEMLQSLIDDGLLCPITDPDRLEWIAPLGEPEPRPPAGYV
Ga0182124_10599782	3300015282	Miscanthus Phyllosphere	MAGNIVVIEVDPWGPSDVTVEMLQLLVHGGLLRPVTDPNRPEWIAPSGEPE
Ga0182124_10617112	3300015282	Miscanthus Phyllosphere	MAGNIVVVEADPWDPSDVTEEMLQSLVDGGLLRPVTDPTR*
Ga0182186_10161291	3300015285	Miscanthus Phyllosphere	MAGGPPVILPVDPWEPSDVSVEVLQSLVDDDLLRPITDPDRPEWIAPLGEPEPRP
Ga0182171_10176241	3300015287	Miscanthus Phyllosphere	MAGDLVVIEADPWDPSNVTVEMLQSLVDGGLLRPVTDPNR
Ga0182173_10151381	3300015288	Miscanthus Phyllosphere	PSHNGGGPPIILPVDPWGPSNVSVETLESLVDDGLLRPITDPDRLE*
Ga0182173_10314102	3300015288	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTEEMLQSLVDGGLLHPVTDPNRPEWIAPSGEPELRPRNG
Ga0182173_10431581	3300015288	Miscanthus Phyllosphere	MAGDIVVIEADSWDPSDVTMEMLQSLIDGGLLRPVTD
Ga0182173_10479341	3300015288	Miscanthus Phyllosphere	MAGGPIILPADPWDPSDMSVEMLRSLIDDGLLRPITNPDRPEWIAPLGELEPRPPAG*
Ga0182173_10822631	3300015288	Miscanthus Phyllosphere	MAGGAVVLRADPWGWSDVSMETLQSLVDDSLLRPVTDPSRLEWIAPGGEPESRPCDGY
Ga0182138_10107501	3300015289	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTEEMLQSLVNGGLLRPVIDPTRPEWIAPYGE
Ga0182125_10406501	3300015291	Miscanthus Phyllosphere	MAGNVVVVEADPWDPSDVTEEMLQSLIDGVLLRPVTDP
Ga0182125_10945641	3300015291	Miscanthus Phyllosphere	MAGDIVVIEEDPWGPSDVTMEMLQSLVDGGLLRSVTDPNRLEWI
Ga0182141_10773561	3300015292	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQSLVDGGLLRPVTDPNRL
Ga0182126_10159291	3300015294	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTMEMLQSLVDGGLLRPVMDP
Ga0182126_10267561	3300015294	Miscanthus Phyllosphere	MADGPVILLVDPWGLSDVSVETLQSLVDDGLLCSVTDPNRPKWIAPSGEPKPR
Ga0182175_10805731	3300015295	Miscanthus Phyllosphere	MAGGPPVILPVDPWELSDVSVEVLQSLIDGSLLRPITDPVRLE
Ga0182157_10673261	3300015296	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVSMEMLQSLIDDGLLRPITDPDRPEWIAPLGEPEPRPPA
Ga0182157_10900002	3300015296	Miscanthus Phyllosphere	MAGGAVVIQADPWGPSDVSVETLQSLVDDSLLRPVSDPNKPEWIALGNEPEPRP
Ga0182157_10931821	3300015296	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVIVETLESLVDGGLLRPVTDPNRPEWI
Ga0182106_10163331	3300015298	Miscanthus Phyllosphere	MAGDIVVVDADPWDLSDVTEEMLQSLVDGGLLRPVIDPTTPEWI
Ga0182106_10267981	3300015298	Miscanthus Phyllosphere	MAGDIVVIKADPWDPSDVTVEMLQSLVDGGLLRPVTDPNRPKWIAPSGEPEPRPRDG
Ga0182106_10827361	3300015298	Miscanthus Phyllosphere	MAGGPVILPADPWEPSNVSVEVLQSLVDDGLLRPVTDPNRPECIAPSSEPEPRPRDGYVVSFMSF
Ga0182107_10143891	3300015299	Miscanthus Phyllosphere	MASDIVVIEADPWDPSDITVEMLQSLVDGGLLRPVTDPNRLEWIASSGELEPRPCDG
Ga0182107_10563441	3300015299	Miscanthus Phyllosphere	MAGDIVVVEADPWDPSDITEEMLQSLVNGGLLRPVTDPSRPEW
Ga0182107_10770071	3300015299	Miscanthus Phyllosphere	MAGTVVVEADSWGQSDVTVETLQSLVDGGLLRPITDLNRPEWIAPSGEPEPRPCDG
Ga0182107_11047721	3300015299	Miscanthus Phyllosphere	MVGGLVILPVDPWGSSDMSVETLQSLVDDGLLHPVTDPNRLEWIAPSGEPELRPRD
Ga0182108_10140111	3300015300	Miscanthus Phyllosphere	MAGNVVVVEADPWDPSDVTEEMLQSLVDGGLLHPVTDSTRPEWIAPYGEPEPR
Ga0182108_10315281	3300015300	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQSLVDGGLLRPVTDPNRPELIAP
Ga0182108_10498971	3300015300	Miscanthus Phyllosphere	MAGDIVVIEVDPWDPSDITVEMLQSLVDGRLLRPMTDPSRPEW
Ga0182143_10823722	3300015302	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQSLVDSGLLRPMTDPNRPKWIAPSGESEPRPRDGYVV
Ga0182143_10833151	3300015302	Miscanthus Phyllosphere	MAGDIVVIEVDPWDPSDVTVETLQSLVDGGLLRPETDPNRPEWIAPSGEPEPRP
Ga0182123_10107141	3300015303	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTAEMLQLLVNGGLLRLVMDPNRPE
Ga0182123_10319061	3300015303	Miscanthus Phyllosphere	MAGDIVAIEVDPWDPSDVSVDMLQSLIDGGLLRPVTDPNRPEWIAPLGESE
Ga0182112_10215261	3300015304	Miscanthus Phyllosphere	MAGDIVVVEADPWDPSDVTKDMLQSLVDGGLLRPVTDPTRPEWIAPYGE
Ga0182112_10469371	3300015304	Miscanthus Phyllosphere	MVGAVVIQVDPWGPSDVSMETLQSLVDDGLLRPVTDPNRPEWIAPSGEPEPRPHD
Ga0182158_10610672	3300015305	Miscanthus Phyllosphere	MAGGHIILPADPWDPSDVSVEMLRSLIDNGLLRPITDPDRPEWIAPSGEPEPRPR*
Ga0182158_10771891	3300015305	Miscanthus Phyllosphere	MTGDTVVIGADPWYPSDITVEMLQLLIDGGLLRPVTDPNRPEWIAPS*
Ga0182158_10792661	3300015305	Miscanthus Phyllosphere	MAGDIVVVEADPWDPSDVTEEMLQSLVDGGLLRPVTDSTRP
Ga0182158_11027341	3300015305	Miscanthus Phyllosphere	MAGDIIVIEVDPWDPSDVTVEMLQSLIDGGLLHPVTNPNRLEWIAPSGEPE
Ga0182144_10650051	3300015307	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQSLVDGGLLHPVTDPNRPEWIAPLGEPEPRPH
Ga0182144_10789791	3300015307	Miscanthus Phyllosphere	MASNIVVIEVDPWGPYDITMEMLQSLIDGGLLRPVTDPNRPEWITPLGEPEPR
Ga0182144_11079261	3300015307	Miscanthus Phyllosphere	MAGNVVVVEADPWDPSDVTEEMLQSLVDGGLFRPVIDPSRSEWIAPYGELEPRP
Ga0182142_10525672	3300015308	Miscanthus Phyllosphere	MAGNIVVIEADPWDPSDVIVETLESLIDGGLLRPVTDPNRPEWIAPYGEP*
Ga0182140_10330661	3300015314	Miscanthus Phyllosphere	MADDIVVIEADPWGPSDVTVEMLQSLIDGGLLRPITDPNRPEWIAPSGEPEQRPH
Ga0182140_11084152	3300015314	Miscanthus Phyllosphere	MAGDIVVIEVDPWDTSDVTMEVLQSLIDGGLLRPVTD
Ga0182110_10202581	3300015322	Miscanthus Phyllosphere	MAGDIVVIEADPWGPSDVTVEMLRSLVDGGLLCPVTDPNRPEWITP
Ga0182110_10586891	3300015322	Miscanthus Phyllosphere	MAGDIVVIKVDPWDSSDITVEMLQSLIDGRLLRSVTGPNRPEWIAPLGEPKPRPR
Ga0182110_10924691	3300015322	Miscanthus Phyllosphere	MASDIIVIEADPWDPSDVTMEMLQSLVDGGLLRPVTDPNRLE*
Ga0182110_11188031	3300015322	Miscanthus Phyllosphere	MVDGPPVILPADPWEPSDVSVYVLQSLVDDGLLRPITDPDRPEWIAPL
Ga0182110_11260331	3300015322	Miscanthus Phyllosphere	MAGGPPVILPVDHWEPSDVSVEVLQSLVDDDLLRPITDPD
Ga0182129_10929482	3300015323	Miscanthus Phyllosphere	MADDIVVIEADPWDASNVTVEMLQSLVDGGLLRPMTDPNRPEWITPLGEPE
Ga0182187_11824851	3300015341	Miscanthus Phyllosphere	MAGTVVIETDAWGQSDVSVEMLQSLVDDGLLRLVTDPNRLEWIALS
Ga0182109_11757782	3300015342	Miscanthus Phyllosphere	VIEADPWDPSDITVEMLQSLVDRGLLRPVTDPSRPEWIAPS*
Ga0182109_12033021	3300015342	Miscanthus Phyllosphere	MAGNVVVVEADPWDPSDVTEEMLQSLVDGGLLCPVTDPSRPE
Ga0182155_10941631	3300015343	Miscanthus Phyllosphere	MAGSPPVILPVDPWEPSDVSVEVLQSLVDDGLLRPITDPDRPEWIAPLGEREP
Ga0182155_11150841	3300015343	Miscanthus Phyllosphere	MVGGPPVILPVDPWEPSDVSVEVLQSLIDDGLLRPITDPDRPEWIAPLGER
Ga0182155_11472081	3300015343	Miscanthus Phyllosphere	MADDIVVIEADPWDPSDVTMEMLQSLIDGGLLRPVTDPNRPEWIAPSGE*
Ga0182189_11507032	3300015344	Miscanthus Phyllosphere	MAGDIVVIEVDPWDPSDITVEMLQSLVDGGHLRPVTDTNRSEWIAPSGR
Ga0182189_11783731	3300015344	Miscanthus Phyllosphere	MAGDIVVVEADPWDPSDVTEEMLQSLVDGGLLHPETD
Ga0182111_11367941	3300015345	Miscanthus Phyllosphere	MAGDIVVIEVDPWDPSDVTTEMLQSLVDGGLLRLVTDPNRPEWIALSSKP*
Ga0182111_11737791	3300015345	Miscanthus Phyllosphere	MASGAIVIQADPWGPSDVSAETLQSLIDDGLLHPVTDPNRPKWIALGAEPELRPRDG
Ga0182111_12271461	3300015345	Miscanthus Phyllosphere	MADDIVVVEADPWDLSDVTEEMLQSLVDGGLLRPVTDPTRPEWIAPYSEPEPR
Ga0182139_11055701	3300015346	Miscanthus Phyllosphere	MAGNVVVVEADPWDPSDVTEEMLQSLVDGGLLRPVTDPSRPEWIAP
Ga0182139_12153771	3300015346	Miscanthus Phyllosphere	MAGNIVVVEVDPWDPSDVTEEMLRSLVDGGLLRPVTDSTRPEWIAP
Ga0182177_12351001	3300015347	Miscanthus Phyllosphere	MAGGPVILQADPWGPCDVTMATLQSLVDDCPLCPITVPIRPEWIALGGEPELRPRDGYI
Ga0182161_11286061	3300015351	Miscanthus Phyllosphere	MAGDIVVVEADPWDPSNVTEEVLQSLVDGGLLRPVTDSTRPEWI
Ga0182161_12226221	3300015351	Miscanthus Phyllosphere	MADDIVVIEVDPWGPSDVTVEILQSLVDGGLLRPVTDPNRPEWITLSGELEPRP
Ga0182161_12336842	3300015351	Miscanthus Phyllosphere	MAGTIVVIEADPWGRSDVSVETLQSLIDDGLLCPVTDPNRLEWIAPSGEPESRPSDGYVV
Ga0182159_12758481	3300015355	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQWLVDDGLLHPVTDPNRPEWIAP
Ga0182159_13192081	3300015355	Miscanthus Phyllosphere	MAGDIVVIEADPWGLSDVIVEMLQSLVDGGLLRPITDPNRPEWIAPSG
Ga0182145_10531662	3300015361	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQSLVDGRLLRPVTDPNRPEWIAPS*
Ga0182145_11180992	3300015361	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDITVEMLQSLIDDGLLRPVTDPSRP*
Ga0182203_11618231	3300017404	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSNIIVEMLQSLVDSRLLRSVTDPNRPEW
Ga0182204_10819021	3300017409	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQSLVDGGLLRPVTDPNRPEWIAPSGEPE
Ga0182204_10907641	3300017409	Miscanthus Phyllosphere	MAGNVIVIEVDPWGPSDVTVELLQSLVDGGLLRPVTD
Ga0182207_11119612	3300017410	Miscanthus Phyllosphere	MAGNVVVVEADPWDPSDVTEEMLQSLVDGGLLRPVTDPSRPEWI
Ga0182207_11267111	3300017410	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEVLQSLVDSGLLRSVIDPNRLQWIAPSGEPELRPRDD
Ga0182207_11430072	3300017410	Miscanthus Phyllosphere	MASGAVVLQADPWAPSDVSMVELQSLVDDGLLRPVIDPSRTEWIALGNKPKPRP
Ga0182208_10293591	3300017411	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQSLVDGGLLRPVTDPNRPEWIAPLGE
Ga0182222_10370972	3300017413	Miscanthus Phyllosphere	MAGDIVVIEVDPCDPSDVTVEMLQSLVDGGLLRPVTDPNRPELIAPLGEPE
Ga0182222_10596511	3300017413	Miscanthus Phyllosphere	MASMVFIEANAWGRSDVSVETLQSLVDDGLLHPITDPNRPEWIAPSGEPEPRSHDGY
Ga0182202_11040191	3300017415	Miscanthus Phyllosphere	MAGGPVILSVDPWDPSEVSVEMLQSVIDDGLLRPITDPDRPEWIASSGEP
Ga0182202_11321381	3300017415	Miscanthus Phyllosphere	MAGDIVVVEADPWDPSDVTEEMLQSLVDGGLLRLVTDPTRPEWIAPYGEPEWRPRDGYVV
Ga0182228_10535481	3300017420	Miscanthus Phyllosphere	MASTGVIKADAWHQSDVSVEMLQSLVDDDLLRSVTDPNRPEWISPSGEP
Ga0182228_10770761	3300017420	Miscanthus Phyllosphere	MAGAVVIEADPWGQSDVSMETLQLLIYDDLLRPVTDSNRPEWIAPSGEPEL
Ga0182228_10792321	3300017420	Miscanthus Phyllosphere	MAGGPPVIFPADPWGPSDVSVETLQSLVDGGILRLITDPDRLEWIASLGE
Ga0182228_11006951	3300017420	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQPLVDGGLLCPVTDPNRPEWISPLGEPES
Ga0182219_10380081	3300017424	Miscanthus Phyllosphere	MASDIVVIEADPWDPSDVTVEMLQSLIDGGLLRPVTDPNRPKWIS
Ga0182219_10604651	3300017424	Miscanthus Phyllosphere	MAGAVVIEADPWDQSNITVETLQSLVDGGLFFPVTDSNRPEWIAPSGEPEPRPHD
Ga0182219_10924321	3300017424	Miscanthus Phyllosphere	MAGGPPIILPTDPWELSDVSMEVLQSLVDDGLLRLITDPDRPEWIAPLGEPEPRPREGYV
Ga0182219_11243012	3300017424	Miscanthus Phyllosphere	MADDIIVVEADPWDPSDITEEMLQSLVDGGLLCPVTDPNMPEWIAPYSEPE
Ga0182192_10685991	3300017430	Miscanthus Phyllosphere	MAGNVVVVEADPWDPSDVTEEMLQSLVDGGLLRPVTDPSRPEWIAPYGELEPRPR
Ga0182192_10879711	3300017430	Miscanthus Phyllosphere	MVGGPPVILPVDPWEPSDVSVEVLQSLIDDGLLRPITDPDRPEWIAPL
Ga0182206_10893241	3300017433	Miscanthus Phyllosphere	MAGAVVVEVDSWGQSDVTVEMLQSLVDGRLLRLVADPNRPEWIALSGGPEPRPCDGYIVSFV
Ga0182209_11062641	3300017436	Miscanthus Phyllosphere	MAGTVVLPVDPWGLSDVSKETLQLLVDDGLLCPVADPNRAEWIALGSEPEPRPCDGYI
Ga0182209_11239691	3300017436	Miscanthus Phyllosphere	MVVFSVAPMASAVVVEADSWVQSDVTVETLQSLVDGGLLRPVTDPNGPEWIALSGEP
Ga0182191_10827861	3300017438	Miscanthus Phyllosphere	MAGDIVVVKADPWDPSDVTEEMLQSLVDGGLLRPVTDSTRLEWIAPYGEP
Ga0182191_11269251	3300017438	Miscanthus Phyllosphere	SIAPMADDIVVVEADPWDPSDITEEMLQSLVDGGLLHPMTDPTRPEWIAPYGEPEPRPAMATS
Ga0182191_11645421	3300017438	Miscanthus Phyllosphere	MAGDVVVIKEDPWDLSNVTIEMLQSLVDGRLLRPVTDPNR
Ga0182191_11739501	3300017438	Miscanthus Phyllosphere	MAGNIVVIEVNPWGPSDVTMEMLQSLVDGGLLRLVTDPNRPE
Ga0182221_10801241	3300017442	Miscanthus Phyllosphere	MANIVVLLADPWDRSDVTVGVLQSLVDDGLLRPITDPSKPEWMASGGEPELRP
Ga0182221_11118012	3300017442	Miscanthus Phyllosphere	MAGGPPVILLADPWEPSDVSVEVLQSLVDDGLLRPITDPDRPEWRATN
Ga0182221_11135741	3300017442	Miscanthus Phyllosphere	MASGAVVIQADPWGSSDVSMETLQSLVDDGLHCPITDPNRPEWIAPRGESELRPHDGY
Ga0182193_11974751	3300017443	Miscanthus Phyllosphere	MAGNVVVVEADPWDPSDVTEEMLQSLVDGGLLRPVTNPSRPEWIAPYGELEPRPRD
Ga0182233_10508612	3300017680	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEMLQSLIDGGLLRPVTDPNRPEWIAPSGEPEPRPRDGY
Ga0182233_11069841	3300017680	Miscanthus Phyllosphere	MAGDIVVVEADPWDPSDVTEEVLQSLVDGGLLRPVTDSTRPEWIAPYGEPEPRPRD
Ga0182218_11154432	3300017683	Miscanthus Phyllosphere	MAGDIVVIEVDPWDPSDVTVEMLQLLINGGLLCPVTDPNRTEWIAPSGEQEPRPC
Ga0182218_11366771	3300017683	Miscanthus Phyllosphere	MANVVVLPADPWDRSDVTVGVLQSLVDDGLLHPITDPSRPEWMALGGEPEPRPRDGYVVS
Ga0182218_11498191	3300017683	Miscanthus Phyllosphere	PTVLMAGAVVIQADPWGRSDVSVETLQSLIDDGLLRPVTDPSRPEWIAPGAS
Ga0182225_10427451	3300017684	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTVEVLQSLVDGGLLRPVTDPNRLEWIASSGELEPRPCDGYVV
Ga0182225_10970981	3300017684	Miscanthus Phyllosphere	MLMADNIVVIEADPWGLFDVTVEMLQSLVDGGLLPPVTDPNRLEWISPSGEPEPRPRDG
Ga0182225_11248341	3300017684	Miscanthus Phyllosphere	MAGDIIVIEVDPWDPSNVTEEMLQSLVDSGLLRPV
Ga0182205_10669981	3300017686	Miscanthus Phyllosphere	MADGPPVILSVDPWEPSDVSVEVLQSRVDDSLLRPTTDPDRPEWIAPL
Ga0182231_10823172	3300017689	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDVTMEMLQLLVNGGLLRPVTD
Ga0182223_10925642	3300017690	Miscanthus Phyllosphere	MAGDIVVIEADPWDPSDITVEMLQSLVDSGLLRPVTDPNRPEWIA
Ga0207689_115150691	3300025942	Miscanthus Rhizosphere	MAGDIVVVEADPWDPSDVTEEMLQSLVDGGLLRLVTDPARPEWIAP
Ga0207689_116182961	3300025942	Miscanthus Rhizosphere	MAGDIVVIEADPWDPSDVTAKMLESLIDGGLLHPVMDPNTPEWISSYSE
Ga0207651_108279851	3300025960	Switchgrass Rhizosphere	MAGDIVVVEVDPWDPSDVTEKMLQSLVDGGLLRPVTDSTRPEWIAPYGEPEPRPRD
Ga0207648_116042051	3300026089	Miscanthus Rhizosphere	MAGGPPVILSVDPWEPSDVSVEVLQSLVNDDLLRLITDPDRPKWIAPLGEPEPRPREGYDMSFVSFH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056371

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences