Metagenome / Metatranscriptome Family F056179

Overview

Basic Information

• Family ID: F056179
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 138
• Average Sequence Length: 49 residues
• Representative Sequence: VTDSPEQTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGEL
• Number of Associated Samples: 124
• Number of Associated Scaffolds: 138

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 89.86 %
• % of genes near scaffold ends (potentially truncated): 99.28 %
• % of genes from short scaffolds (< 2000 bps): 88.41 %
• Associated GOLD sequencing projects: 117
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (98.551 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.217 % of family members)
• Environment Ontology (ENVO): Unclassified (19.565 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (45.652 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 41.10%
  β-sheet: 0.00%
  Coil/Unstructured: 58.90%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF09299	Mu-transpos_C	44.20
PF13683	rve_3	39.13
PF13565	HTH_32	2.17
PF00589	Phage_integrase	1.45
PF00665	rve	0.72
PF11761	CbiG_mid	0.72
PF12708	Pectate_lyase_3	0.72
PF13443	HTH_26	0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.72
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.72
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.72
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.72

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.55 %
Unclassified	root	N/A	1.45 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.55 %
Unclassified	root	N/A	1.45 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.55 %
Unclassified	root	N/A	1.45 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	97.83 %
Unclassified	root	N/A	1.45 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.38 %
Unclassified	root	N/A	1.45 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	86.23 %
Unclassified	root	N/A	1.45 %

Level 7

Name	Rank	Taxonomy	Distribution
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.62 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.90 %
Unclassified	root	N/A	1.45 %

Level 8

Name	Rank	Taxonomy	Distribution
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.90 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.90 %
Unclassified	root	N/A	1.45 %

Level 9

Name	Rank	Taxonomy	Distribution
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.90 %
Unclassified	root	N/A	1.45 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001356|JGI12269J14319_10193025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810
3300001418|JGI20188J14859_1022586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648
3300001449|JGI20208J14878_1015043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	874
3300001454|JGI20204J15135_1006347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1146
3300003368|JGI26340J50214_10084174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	830
3300003372|JGI26336J50218_1004297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	899
3300003505|JGIcombinedJ51221_10133515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	999
3300005165|Ga0066869_10002825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2027
3300005169|Ga0066810_10013286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1261
3300005185|Ga0066811_1030306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504
3300005447|Ga0066689_10274281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1042
3300005555|Ga0066692_10971467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520
3300006057|Ga0075026_100368095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801
3300006086|Ga0075019_10499926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754
3300006575|Ga0074053_10000757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1304
3300007258|Ga0099793_10122924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1215
3300009525|Ga0116220_10189045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	890
3300009641|Ga0116120_1019901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2463
3300009641|Ga0116120_1228390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586
3300009665|Ga0116135_1449247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529
3300009698|Ga0116216_10049813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2586
3300010379|Ga0136449_104668115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501
3300010880|Ga0126350_10672769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580
3300012189|Ga0137388_11481342	Not Available	616
3300012199|Ga0137383_10975929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618
3300012200|Ga0137382_10682115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736
3300012209|Ga0137379_10865690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	808
3300012359|Ga0137385_10410709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1153
3300012917|Ga0137395_10944930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621
3300012922|Ga0137394_10866264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755
3300014201|Ga0181537_10313610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1077
3300014493|Ga0182016_10319679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	942
3300016319|Ga0182033_11781782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559
3300016445|Ga0182038_11716076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	566
3300017823|Ga0187818_10134751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1073
3300017823|Ga0187818_10522521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534
3300017924|Ga0187820_1072496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959
3300017927|Ga0187824_10311484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560
3300017959|Ga0187779_10172433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1343
3300017966|Ga0187776_10947373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629
3300017975|Ga0187782_11644627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508
3300018009|Ga0187884_10113514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1167
3300018023|Ga0187889_10043255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2455
3300018060|Ga0187765_10515595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759
3300018064|Ga0187773_10036813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2188
3300018064|Ga0187773_10806789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597
3300018085|Ga0187772_10634108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	762
3300018433|Ga0066667_12183141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515
3300021171|Ga0210405_11254742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546
3300021474|Ga0210390_11369572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565
3300021476|Ga0187846_10220467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792
3300021477|Ga0210398_11534737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518
3300021560|Ga0126371_13264997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548
3300021861|Ga0213853_10644368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589
3300024176|Ga0224565_1015459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820
3300025633|Ga0208480_1025127	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1731
3300025912|Ga0207707_11399997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558
3300026304|Ga0209240_1062904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1387
3300026318|Ga0209471_1266495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577
3300026331|Ga0209267_1290164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546
3300026538|Ga0209056_10433499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770
3300026551|Ga0209648_10324079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1083
3300026831|Ga0207738_121792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569
3300026839|Ga0207764_104008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1530
3300026859|Ga0207859_1004582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1307
3300026898|Ga0207788_1000123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11843
3300026909|Ga0207858_1018454	All Organisms → cellular organisms → Bacteria → Terrabacteria group	672
3300026959|Ga0207852_1003915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1746
3300026979|Ga0207817_1007356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1301
3300027010|Ga0207839_1010923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1067
3300027014|Ga0207815_1014552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	992
3300027523|Ga0208890_1002215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2062
3300027537|Ga0209419_1088102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616
3300027583|Ga0209527_1060879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850
3300027604|Ga0208324_1004251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5144
3300027812|Ga0209656_10316636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717
3300027812|Ga0209656_10383438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633
3300027898|Ga0209067_10153957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1221
3300028673|Ga0257175_1101025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565
3300028742|Ga0302220_10274494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616
3300028877|Ga0302235_10106157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1275
3300030013|Ga0302178_10060293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2051
3300030013|Ga0302178_10173549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1053
3300030013|Ga0302178_10427267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587
3300030056|Ga0302181_10033467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2818
3300030056|Ga0302181_10100013	All Organisms → cellular organisms → Bacteria	1440
3300030494|Ga0310037_10181583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	941
3300030503|Ga0311370_10732547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1153
3300030520|Ga0311372_11291201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	923
3300030520|Ga0311372_11788135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	734
3300030524|Ga0311357_10139470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2404
3300030617|Ga0311356_11289970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668
3300030906|Ga0302314_11295605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674
3300031017|Ga0265744_104619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	734
3300031027|Ga0302308_10238847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1146
3300031090|Ga0265760_10059622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1158
3300031233|Ga0302307_10211336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000
3300031236|Ga0302324_100938281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1185
3300031525|Ga0302326_10121211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4598
3300031549|Ga0318571_10010524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2171
3300031573|Ga0310915_10982920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589
3300031679|Ga0318561_10483415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682
3300031682|Ga0318560_10242043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	968
3300031708|Ga0310686_103467268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	980
3300031718|Ga0307474_11584378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515
3300031744|Ga0306918_10828685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722
3300031778|Ga0318498_10554640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504
3300031781|Ga0318547_10598856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	683
3300031781|Ga0318547_10716164	Not Available	622
3300031798|Ga0318523_10441428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645
3300031823|Ga0307478_11118785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657
3300031831|Ga0318564_10114694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1199
3300031835|Ga0318517_10052274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1714
3300031893|Ga0318536_10628520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536
3300031896|Ga0318551_10587732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642
3300031897|Ga0318520_10789754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595
3300031897|Ga0318520_10799913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591
3300032042|Ga0318545_10037195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1616
3300032065|Ga0318513_10542713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569
3300032090|Ga0318518_10061512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1811
3300032160|Ga0311301_12667219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551
3300032770|Ga0335085_11086448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	858
3300032770|Ga0335085_11816256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624
3300032805|Ga0335078_11675494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699
3300032805|Ga0335078_12257050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571
3300032828|Ga0335080_11310027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	723
3300032895|Ga0335074_10202288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2418
3300032896|Ga0335075_10148791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2926
3300032896|Ga0335075_10361675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1571
3300032896|Ga0335075_10642181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1037
3300032897|Ga0335071_11364777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653
3300032898|Ga0335072_11220280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666
3300032955|Ga0335076_11701417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519
3300033134|Ga0335073_10868602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	955
3300033475|Ga0310811_10764781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	913
3300033808|Ga0314867_008431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2421
3300033829|Ga0334854_059066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	916
3300034124|Ga0370483_0023234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1846

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.96%
Aquatic	Environmental → Aquatic	13.04%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.46%
Peat	Environmental → Terrestrial → Peat	13.04%
Freshwater	Environmental → Aquatic → Freshwater	10.87%
Sediment	Environmental → Aquatic → Sediment	2.17%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Cave	Environmental → Terrestrial → Cave	0.72%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.14%
Loam	Environmental → Terrestrial → Soil → Loam	9.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.72%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.07%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.72%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.22%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.07%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.72%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.72%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental
3300001418	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012	Environmental
3300001449	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow	Environmental
3300001454	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012	Environmental
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental
3300003372	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1	Environmental
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental
3300010379	Sb_50d combined assembly	Environmental
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental
3300026831	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 9 (SPAdes)	Environmental
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental
3300030503	III_Palsa_E3 coassembly	Environmental
3300030520	III_Palsa_N2 coassembly	Environmental
3300030524	II_Palsa_N3 coassembly	Environmental
3300030617	II_Palsa_N2 coassembly	Environmental
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental
3300031017	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)	Environmental
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_101930251	3300001356	Peatlands Soil	VTDSPDQTLALARAAAGAVRSLNHATLGGEGLAQP
JGI20188J14859_10225861	3300001418	Arctic Peat Soil	VTDSPDQTLALARTAAGAVRSLNHATLGGEGLAQPADAYE
JGI20208J14878_10150431	3300001449	Arctic Peat Soil	MADSPDGTLALARTAAEAIRSLNHATLGGDGLGQPADACA
JGI20204J15135_10063471	3300001454	Arctic Peat Soil	VADSPGQTLALARTAAGAVRSLNHATLGGDGLDQPADAYELIGELALAAA
JGI26340J50214_100841742	3300003368	Bog Forest Soil	VTDSPDQTLALARTAAGAVRSLNHATLGGEGLAQPADAYELIGELALAAA
JGI26336J50218_10042971	3300003372	Bog Forest Soil	VTDSPEQTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIG
JGIcombinedJ51221_101335152	3300003505	Forest Soil	VADSPRETLALARTAAGAVRSLNHATLGGDGLGQPADAYELIGELSLAAAGLPQLLA
Ga0066869_100028251	3300005165	Soil	VADSPRETLALARTAAGAVRSLNHATLGGDGLGQPADAYELIGELSLAAAGLPQLLAQVGRWL
Ga0066810_100132862	3300005169	Soil	VADSPEETLALARTAAGAVRSLNHATLGGDGLGQPADAYELIGEL
Ga0066811_10303062	3300005185	Soil	VTDVPDQTLALARTAAGAVRSLNHATLGGRGLDWPAGACELIGELALAAAGLPQ
Ga0066689_102742812	3300005447	Soil	VTDSPEQTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGEL
Ga0066692_109714672	3300005555	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGLPQLLAQVGRWLAA
Ga0075026_1003680951	3300006057	Watersheds	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGLPQLL
Ga0075019_104999262	3300006086	Watersheds	VTDAPDQTLALARTAAAAVRSLNHATLGGAGLEQPADAHGLVGELSLAAAGLPQLLA
Ga0074053_100007571	3300006575	Soil	VADSPRETLALARTAAGAVRSLNHATLGGDGLGQPADAYELIGEL
Ga0099793_101229241	3300007258	Vadose Zone Soil	VTDSPDQTLALARTAAGAVRSLNHATLGGEGLAQPADAYELIGEL
Ga0116220_101890451	3300009525	Peatlands Soil	VADSPRETLALARTAAGAVRSLNHATLGSGGLAQPADAYELIGELSLA
Ga0116120_10199014	3300009641	Peatland	MKEAAVADSPRETLALARAAAGAVRSLNHATLGGQGLDWPADACELIGELSLAAAG
Ga0116120_12283901	3300009641	Peatland	VDDSPDGTLALARTAAEVIRSLNHATLGGDGLEQPADAYAVLGEL
Ga0116135_14492471	3300009665	Peatland	VTDSPRKTLALARTAAGAVRSLNHATLGGDGLAQPADAYE
Ga0116216_100498133	3300009698	Peatlands Soil	VTDSPDQTLALARTAAGAVRSLNHATLGGEGLAQPADAYELIGELALAA
Ga0136449_1046681152	3300010379	Peatlands Soil	VTDCPQQTLALARTAAGAVRSLNHATLGGDGLGQPADAYELIGELALAAAGLPQLLAQV
Ga0126350_106727691	3300010880	Boreal Forest Soil	VTDSPDQALALARTAAGAVRSLNHATLGGQGLAHPADAYELIGELALAAAGLPQ
Ga0137388_114813422	3300012189	Vadose Zone Soil	MKEAAVADSPRETLALARTAAGTVRSLNHATLGSGGLAQPADAYELIGELSLA
Ga0137383_109759292	3300012199	Vadose Zone Soil	VADSPEETLALARTAAGAVRSLNHATLGGGGLGQPADAYELIGELALAAAG
Ga0137382_106821151	3300012200	Vadose Zone Soil	VADSPGQTLALARTAAGAVRSLNHATLGGQGLDWPADAYELIG
Ga0137379_108656902	3300012209	Vadose Zone Soil	VADSPRETLALARTAAGAVRSLNHATLGGEGLDWPADAYELIGELSLAAAGLPQ
Ga0137385_104107093	3300012359	Vadose Zone Soil	VADSPRETLALARTAAGAVRSLNHATLAGDGPVRLADACELLGVLSLAASGLPRLLAEVGRWLPSALASGR
Ga0137395_109449302	3300012917	Vadose Zone Soil	VADSPGQTLALARTAAGAVRSLNHATLGGAGLAQPADAYSLLGELSLAAA
Ga0137394_108662642	3300012922	Vadose Zone Soil	VADSPRETLALARTAAGAVRSLNHATLGGDGPGQPAGACELTGELTPAAAGLP
Ga0181537_103136102	3300014201	Bog	MSDSPQAVALARSAAEAVRGLNHATLGGDGLAQPAEAYEVLGELS
Ga0182016_103196791	3300014493	Bog	VADSPQETLALARTAAGAVRSLNHATLGGAGLEQPADAYGL
Ga0182033_117817822	3300016319	Soil	VADSPDQTLALARTAAGTVRSLNHATLGGAGLAQPADAYELIGELSLAASGLP
Ga0182038_117160762	3300016445	Soil	VADSPRETLALARTAAGAVRSLNHATLGGDGLGQPADAYELIGELSLAAAGLPQLLAQV
Ga0187818_101347511	3300017823	Freshwater Sediment	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELA
Ga0187818_105225211	3300017823	Freshwater Sediment	VTDASGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELA
Ga0187820_10724962	3300017924	Freshwater Sediment	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGEL
Ga0187824_103114841	3300017927	Freshwater Sediment	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGL
Ga0187779_101724331	3300017959	Tropical Peatland	VADSPRETLALARTAAGAVRSLNHATLGSGGLDWPADACELIGEL
Ga0187776_109473732	3300017966	Tropical Peatland	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGLPQLLAQVGR
Ga0187782_116446272	3300017975	Tropical Peatland	MKEAAVADSPRETLAVARAAAGAVRSLNHATLGGQGLGQPADAYELLGELSLAVSGLP
Ga0187884_101135142	3300018009	Peatland	VDDSPDGTLALARTAAEVIRSLNHATLGGDGLEQPADAYAVLGELSLAASRL
Ga0187889_100432553	3300018023	Peatland	MKEAAVADSPRETLALARAAAGAVRSLNHATLGGQGLDWPADACELIGE
Ga0187765_105155951	3300018060	Tropical Peatland	MTRTGRDMADCPHETLALARTAAEAVRSLNHATLGGDGLEQPSDAYEVLGELSTAASRIP
Ga0187773_100368131	3300018064	Tropical Peatland	MKEAAVADSPRETLALARTAAGAVRSLNHATVGSGGLAQPADAY
Ga0187773_108067892	3300018064	Tropical Peatland	VTDAPGTLALARTAAGAVRSLNHATLGGEGLRQPADAYEVLGELSLAAAGLPQ
Ga0187772_106341081	3300018085	Tropical Peatland	VTDSPQQTLALARTAAAAVRSLNHATLGGQGLAQPADAVSGAWLF
Ga0066667_121831411	3300018433	Grasslands Soil	VADSPRETLALARTAAGAVRSLNHATLGGDGLGQPADAYELIGELSLAAAGLPQLLAQVG
Ga0210405_112547421	3300021171	Soil	VADSPHETLALARTAAGAVRSLNHATLGGDGLAQP
Ga0210390_113695721	3300021474	Soil	VADSPGQTLALARAAAGAVRSLNHATLGGEGLAQPADAYELL
Ga0187846_102204671	3300021476	Biofilm	VTDSPEETLALARTAAGAVRSLNHATLGGEGLAQPADAYAVLGELALAAAG
Ga0210398_115347371	3300021477	Soil	VTDSPRKTLALARTAAGAVRSLNHATLGGEGLAQPADAYELIGELSLAAAG
Ga0126371_132649972	3300021560	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAVAGLPQLLAQVGRWLAAALVAG
Ga0213853_106443681	3300021861	Watersheds	VTDAPGTLARTAAGAVRSLNHATLGGQGLAQPADAYA
Ga0224565_10154592	3300024176	Plant Litter	VADPPGQTLALARTAAGAVRSLNHATLGGDGLDQPADAYELIGEL
Ga0208480_10251273	3300025633	Arctic Peat Soil	VADSPQETLALARTAAGAVRSLNHATLGGAGLEQPADAYGLL
Ga0207707_113999971	3300025912	Corn Rhizosphere	MSDFPDGTLALARAAAEAIRGLNHATLGAEGFGQPS
Ga0209240_10629042	3300026304	Grasslands Soil	MKEAAVADSPRETLALARTAAGTVRSLNHATLGSGGLAQPADAYELIGELSLAAAGLPQLLAQVGRWLASALEA
Ga0209471_12664952	3300026318	Soil	VTDSPEQTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELGLA
Ga0209267_12901641	3300026331	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGLPQ
Ga0209056_104334991	3300026538	Soil	VTDSPEQTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELGLAAAGLPQLLAQVGRWLAAALAA
Ga0209648_103240793	3300026551	Grasslands Soil	VADSPEETLALARTAAGAVRSLNHATLGGEGLDWPADACELIGEL
Ga0207738_1217922	3300026831	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAY
Ga0207764_1040082	3300026839	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALA
Ga0207859_10045822	3300026859	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAVTGAGR
Ga0207788_100012311	3300026898	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAVAGLPQLLAQVG
Ga0207858_10184542	3300026909	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAVA
Ga0207852_10039153	3300026959	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADA
Ga0207817_10073561	3300026979	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAVAG
Ga0207839_10109231	3300027010	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPAGAYELIGELALAVAGLPQLLAQV
Ga0207815_10145522	3300027014	Tropical Forest Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAVAGLPQLL
Ga0208890_10022153	3300027523	Soil	VADSPEETLALARTAAGAVRSLNHATLGGDGLGQPA
Ga0209419_10881021	3300027537	Forest Soil	VTDSPDQTLALARTAAGAVRSLNHATLGGEGLAQPADAYELI
Ga0209527_10608792	3300027583	Forest Soil	VTDSPDQTLALARTAAGAVRSLNHATLGGEGLAQPADAYELIGELALAAAGLP
Ga0208324_10042511	3300027604	Peatlands Soil	VTDSPEETLALASTAAGAVRSLNHATLGGEGLAQPADAYELI
Ga0209656_103166362	3300027812	Bog Forest Soil	VTDSPEQTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAA
Ga0209656_103834382	3300027812	Bog Forest Soil	VTDSPDQTLALARTAAGAVRSLNHATLGGEGLAQPADAYELIGELALAAAGLPQL
Ga0209067_101539571	3300027898	Watersheds	VADSPRETLALARTAAGAVRSLNHATLGSGGLAQPADAYELIG
Ga0257175_11010251	3300028673	Soil	VTDSPDQTLALARTAAGAVRSLNHATLGGEGLAQPA
Ga0302220_102744942	3300028742	Palsa	VADSPEETLALARTAAAAVRSLNHATLGGEGMEQPADAYGLLGELSLAAAGLPQLLAQVGRWLASAL
Ga0302235_101061572	3300028877	Palsa	VADSPQETLALARNAAGAVRSLNHATLGGAGLEQPADAYGLLGELSLAAACLPQL
Ga0302178_100602931	3300030013	Palsa	VADSARDTLSLARTAAGAVRSLNHATLGGEGLAQPA
Ga0302178_101735492	3300030013	Palsa	VTDAPRETVALARTAAGAVRSLNHATLGGQGLDQPADAYELIGELALAAAGLPQLLAQVGRWLA
Ga0302178_104272672	3300030013	Palsa	VTDSRDRTLALARTAAGAVRSLNHATLGGEGLAQPADAYQLIGELALAAAGLPQLLAQ
Ga0302181_100334671	3300030056	Palsa	VADSPEETLALARTAAAAVRSLNHATLGGEGMEQP
Ga0302181_101000131	3300030056	Palsa	VTDAPRETVALARTAAGAVRSLNHATLGGQGLDQPADAYELIGEL
Ga0310037_101815831	3300030494	Peatlands Soil	VADSPRETLALARTAAGAVRSLNHATLGGDGLGQPADAYELIGELSLAAAGLPQLLAQAGRWLASAL
Ga0311370_107325472	3300030503	Palsa	VTDSRDQTLALARTAAGAVRSLNHATLGGQGLDQPADAYELIG
Ga0311372_112912012	3300030520	Palsa	VTDSRDRTLALARTAAGAVRSLNHATLGGDGLAQPADAYQLI
Ga0311372_117881352	3300030520	Palsa	VTDSPRKTLALARTAAGAVRSLNHATLGGDGLAQPADAYELIGELALAAAGLPQLLAQIGRWLTAAL
Ga0311357_101394701	3300030524	Palsa	VADSPQETLALARNAAGAVRSLNHATLGGAGLEQPADAYGLLGELSLAAACLPQLL
Ga0311356_112899701	3300030617	Palsa	VTDSPGQTLALARTAAGAVRSLNHATLGGEGLAQPADAYELIGELALAAAGLPQLLAQAGRWLASALA
Ga0302314_112956052	3300030906	Palsa	VTDSPRKTLALARTAAGAVRSLNHATLGGDGLAQPADAYELIGELAL
Ga0265744_1046191	3300031017	Soil	VADSPGQTLALARAAAGAVRSLNHATLGGDGLGQPADAYELIGELALAAAGL
Ga0302308_102388471	3300031027	Palsa	VTDSRDQTLALARTAAGAVRSLNHATLGGQGLDQPADAYEL
Ga0265760_100596221	3300031090	Soil	VADSPGQTLALARTAAGAVRSLNHATLGGDGLDQPADAYELIGELALAAAG
Ga0302307_102113362	3300031233	Palsa	VADSPQETLALARTAAGAVRSLNHATLGGAGLEQPAD
Ga0302324_1009382811	3300031236	Palsa	VSDSPEETLALARAAAGAVRSLNHATLGGGGLAQPADAYELIGELSLAASGQPQLRA
Ga0302326_101212111	3300031525	Palsa	VADSPQETLALARTAAGAVRSLNHATLGGAGLEQPADAYGLLGELSLAA
Ga0318571_100105241	3300031549	Soil	VADSPEETLALARTAAGAVRSLNHATLGGEGLAQPADAYGLLGELSLTAAGLPQLLAQVGRRQG
Ga0310915_109829201	3300031573	Soil	VADSPEETLALARTAAGAVRSLNHATLGGEGLAQPADAYGLLGELSLTAAGLPQLLAQV
Ga0318561_104834152	3300031679	Soil	VADSPEETLALARTAAGAVRSLNHATLGGEGLAQPA
Ga0318560_102420432	3300031682	Soil	VADSPDQTLALARTAAGTVRSLNHATLGGAGLAQPADAYELIGELSLAASGLPQLL
Ga0310686_1034672681	3300031708	Soil	VADSPRETLALARTAAGAVRSLNHATLGSGGLAQPADAYELIGELSL
Ga0307474_115843781	3300031718	Hardwood Forest Soil	VADSPHETLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGLPQLLAQ
Ga0306918_108286852	3300031744	Soil	VTDSPEETLALARTAAGAVRSLNHATLGGQGLAQPADAYAVLGELAL
Ga0318498_105546402	3300031778	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYE
Ga0318547_105988561	3300031781	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQLADELVGVGGLA
Ga0318547_107161641	3300031781	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAVAGLPQLLA
Ga0318523_104414281	3300031798	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGLPQLLAQAGR
Ga0307478_111187852	3300031823	Hardwood Forest Soil	VSDSPEETLALARTAAAAVRSLNHATLGGGGLAQPADAYELIGEL
Ga0318564_101146941	3300031831	Soil	VADSPDQTLALARTAAGTVRSLNHAPLGGAGLAQPADGS
Ga0318517_100522741	3300031835	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGLPQLLAQ
Ga0318536_106285201	3300031893	Soil	VADSPEETLALARTAAGAVRSLNHATLGGEGLAQPADAYGLLGELSLTAAGLPQ
Ga0318551_105877322	3300031896	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAVAGLPQLLAQVGRWLAAALA
Ga0318520_107897542	3300031897	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPA
Ga0318520_107999132	3300031897	Soil	VADSPEETLALARTAAGAVRSLNHATLGGEGLAQPAEG
Ga0318545_100371951	3300032042	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELGEA
Ga0318513_105427132	3300032065	Soil	VADSPDQTLALARTAAGTVRSLNHATLGGAGLAQPADAYELIGELSLAASGLPQLLA
Ga0318518_100615121	3300032090	Soil	VADSPEETLALARTAAGAVRSLNHATLGGEGLAQPADAYGLLGELSLTAAGLPQLLAQVG
Ga0311301_126672191	3300032160	Peatlands Soil	VTDSPEETLALARTAAGAVRSLNHATLGGQGLAQPADA
Ga0335085_110864482	3300032770	Soil	VADSPRETLALARSAAGAVRSLNHATLGGTGLGHP
Ga0335085_118162561	3300032770	Soil	VTDSPARTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELS
Ga0335078_116754942	3300032805	Soil	VADSPEQTLALARTAAGAVRSLNHATLGGAGLAQPAEA
Ga0335078_122570501	3300032805	Soil	VTDAPGTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGLPQLLAQVGRWLAAAL
Ga0335080_113100271	3300032828	Soil	VADSPQQTLALARAVSGAVRSLNHATLGGGGFAQPADAY
Ga0335074_102022883	3300032895	Soil	VADSPQETLALARTAAGAVRSLNHATLGGDGLAQPADAC
Ga0335075_101487911	3300032896	Soil	VTDSPQQTVDLARTAAAAVRSLNHATLGGAGLDWPADAYELLGELSAAAA
Ga0335075_103616751	3300032896	Soil	VADSPPETLALARTAAGAVRSLNHATLGGQGLDQPAD
Ga0335075_106421812	3300032896	Soil	VSDPAEQTLALARSAAEAVRSLNHATLGGNGLEQPADAYA
Ga0335071_113647772	3300032897	Soil	VADSPRETLALARTAAGAVRSLNHATLGGDRLGQPADA
Ga0335072_112202802	3300032898	Soil	VADSPQETLALARTAAGAVRSLNHATLGGDGLEQPADAYELIG
Ga0335076_117014172	3300032955	Soil	VTDSPDRTLALARTAAGAVRSLNHATLGGQGLAQPADAYELIGELALAAAGL
Ga0335073_108686022	3300033134	Soil	VTDSPQQTVDLARTAAAAVRSLNHATLGGAGLDWPADAYELLGELSAA
Ga0310811_107647812	3300033475	Soil	MSDSPDETLALARAAAEAVRALNHATLGGGLGQPSDAYTVLGEL
Ga0314867_008431_2306_2419	3300033808	Peatland	MKEAAVADSPRETLALARAAAGAVRSLNHATLGSGGLA
Ga0334854_059066_795_914	3300033829	Soil	MTDSRDQTLALARTAAGAVRSLNHATLGGQGLDWPADAYE
Ga0370483_0023234_1_126	3300034124	Untreated Peat Soil	MTDSPDQTLALARTAAGAVRSLNHATLGGEGLAQPADAYELI