Metagenome / Metatranscriptome Family F056141

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056141
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	48 residues
Representative Sequence	VDISKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL
Number of Associated Samples	122
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.64 %
% of genes near scaffold ends (potentially truncated)	72.46 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.319 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater (22.464 % of family members)
Environment Ontology (ENVO)	Unclassified (51.449 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.377 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.26% β-sheet: 0.00% Coil/Unstructured: 39.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00574	CLP_protease	21.74
PF10902	WYL_2	13.77
PF13394	Fer4_14	9.42
PF01242	PTPS	4.35
PF00984	UDPG_MGDP_dh	3.62
PF13759	2OG-FeII_Oxy_5	2.17
PF01227	GTP_cyclohydroI	2.17
PF00149	Metallophos	1.45
PF01230	HIT	0.72
PF13328	HD_4	0.72
PF02739	5_3_exonuc_N	0.72
PF13353	Fer4_12	0.72
PF01370	Epimerase	0.72
PF01171	ATP_bind_3	0.72
PF06745	ATPase	0.72
PF00004	AAA	0.72
PF03721	UDPG_MGDP_dh_N	0.72
PF07896	DUF1674	0.72
PF02348	CTP_transf_3	0.72
PF16473	Rv2179c-like	0.72
PF13488	Gly-zipper_Omp	0.72
PF02511	Thy1	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	43.48
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	43.48
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	21.74
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	4.35
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	4.35
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	4.35
COG5508	Uncharacterized conserved protein, DUF1674 domain	Function unknown [S]	0.72
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.72
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.72
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.72
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.72
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.72
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.72
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.72
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.72
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.72
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.72
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
All Organisms	root	All Organisms	37.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
cellular organisms	root	All Organisms → cellular organisms	23.19 %
Viruses	superkingdom	All Organisms → Viruses	14.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.80 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.72 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.80 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	5.07 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.72 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	6.52 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	5.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.45 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.72 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.72 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	6.52 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	5.07 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.72 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.72 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	6.52 %
Candidatus Nitrosopelagicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus	5.07 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.72 %
unclassified Legionellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales	0.72 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	0.72 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	0.72 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	6.52 %
unclassified Candidatus Nitrosopelagicus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus	5.07 %
Vibrio phage 2.275.O._10N.286.54.E11	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 2.275.O._10N.286.54.E11	0.72 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.72 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	0.72 %
unclassified Porticoccaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae	0.72 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	6.52 %
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	5.07 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.72 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.72 %
Vibrio phage 2.275.O._10N.286.54.E11	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 2.275.O._10N.286.54.E11	0.72 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.72 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	6.52 %
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	5.07 %
Maribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter	0.72 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.72 %
Vibrio phage 2.275.O._10N.286.54.E11	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 2.275.O._10N.286.54.E11	0.72 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.72 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	6.52 %
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	5.07 %
unclassified Maribacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter	0.72 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.72 %
Vibrio phage 2.275.O._10N.286.54.E11	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 2.275.O._10N.286.54.E11	0.72 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.72 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.77 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	6.52 %
Candidatus Nitrosopelagicus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	5.07 %
Maribacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	0.72 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.72 %
Vibrio phage 2.275.O._10N.286.54.E11	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 2.275.O._10N.286.54.E11	0.72 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.72 %
Legionellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2236876005\|none_p100875	Not Available	532	Open in IMG/M
3300001344\|JGI20152J14361_10090218	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	637	Open in IMG/M
3300001346\|JGI20151J14362_10140283	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	742	Open in IMG/M
3300001352\|JGI20157J14317_10054143	All Organisms → cellular organisms → Bacteria → Proteobacteria	1817	Open in IMG/M
3300001352\|JGI20157J14317_10117499	Not Available	906	Open in IMG/M
3300001450\|JGI24006J15134_10239974	Not Available	527	Open in IMG/M
3300001472\|JGI24004J15324_10032643	All Organisms → Viruses → Predicted Viral	1672	Open in IMG/M
3300003346\|JGI26081J50195_1025808	All Organisms → Viruses → Predicted Viral	1297	Open in IMG/M
3300003620\|JGI26273J51734_10037267	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1660	Open in IMG/M
3300004097\|Ga0055584_100032166	Not Available	5157	Open in IMG/M
3300004279\|Ga0066605_10040553	All Organisms → Viruses → Predicted Viral	2160	Open in IMG/M
3300004279\|Ga0066605_10180875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300005523\|Ga0066865_10154793	Not Available	850	Open in IMG/M
3300005934\|Ga0066377_10031757	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300005941\|Ga0070743_10080529	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1099	Open in IMG/M
3300006027\|Ga0075462_10167488	Not Available	668	Open in IMG/M
3300006793\|Ga0098055_1349735	Not Available	549	Open in IMG/M
3300007554\|Ga0102820_1039865	Not Available	1145	Open in IMG/M
3300007554\|Ga0102820_1100796	Not Available	694	Open in IMG/M
3300007557\|Ga0102821_1193112	Not Available	519	Open in IMG/M
3300007647\|Ga0102855_1203073	Not Available	529	Open in IMG/M
3300007862\|Ga0105737_1143797	Not Available	617	Open in IMG/M
3300009000\|Ga0102960_1037074	All Organisms → Viruses → Predicted Viral	1807	Open in IMG/M
3300009000\|Ga0102960_1125609	Not Available	929	Open in IMG/M
3300009003\|Ga0102813_1035648	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1754	Open in IMG/M
3300009071\|Ga0115566_10352396	Not Available	857	Open in IMG/M
3300009077\|Ga0115552_1138291	Not Available	1029	Open in IMG/M
3300009079\|Ga0102814_10009303	All Organisms → cellular organisms → Bacteria	5919	Open in IMG/M
3300009079\|Ga0102814_10562253	Not Available	623	Open in IMG/M
3300009193\|Ga0115551_1161795	Not Available	1021	Open in IMG/M
3300009193\|Ga0115551_1350796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium	639	Open in IMG/M
3300009433\|Ga0115545_1207603	Not Available	666	Open in IMG/M
3300009437\|Ga0115556_1292786	Not Available	575	Open in IMG/M
3300009443\|Ga0115557_1130079	Not Available	1035	Open in IMG/M
3300009445\|Ga0115553_1405774	All Organisms → cellular organisms → Eukaryota → Opisthokonta	518	Open in IMG/M
3300009476\|Ga0115555_1130949	Not Available	1061	Open in IMG/M
3300009496\|Ga0115570_10417859	Not Available	568	Open in IMG/M
3300009497\|Ga0115569_10424967	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	571	Open in IMG/M
3300009505\|Ga0115564_10386818	Not Available	685	Open in IMG/M
3300009507\|Ga0115572_10076064	All Organisms → Viruses → Predicted Viral	2055	Open in IMG/M
3300009507\|Ga0115572_10541044	Not Available	644	Open in IMG/M
3300009508\|Ga0115567_10956616	Not Available	507	Open in IMG/M
3300009677\|Ga0115104_10115498	Not Available	562	Open in IMG/M
3300012953\|Ga0163179_10014258	All Organisms → cellular organisms → Bacteria	5209	Open in IMG/M
3300016748\|Ga0182043_1246286	Not Available	1151	Open in IMG/M
3300017708\|Ga0181369_1038272	Not Available	1107	Open in IMG/M
3300017719\|Ga0181390_1167763	Not Available	543	Open in IMG/M
3300017742\|Ga0181399_1037988	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1286	Open in IMG/M
3300017746\|Ga0181389_1034908	Not Available	1518	Open in IMG/M
3300017779\|Ga0181395_1253804	Not Available	537	Open in IMG/M
3300017782\|Ga0181380_1011752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3358	Open in IMG/M
3300017783\|Ga0181379_1008498	All Organisms → Viruses → Predicted Viral	4356	Open in IMG/M
3300017783\|Ga0181379_1115471	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	974	Open in IMG/M
3300017949\|Ga0181584_10234549	Not Available	1194	Open in IMG/M
3300017952\|Ga0181583_10924470	Not Available	507	Open in IMG/M
3300017957\|Ga0181571_10453368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	789	Open in IMG/M
3300017964\|Ga0181589_10478502	Not Available	808	Open in IMG/M
3300018036\|Ga0181600_10531275	Not Available	555	Open in IMG/M
3300018418\|Ga0181567_10006611	Not Available	8422	Open in IMG/M
3300018424\|Ga0181591_10588608	Not Available	798	Open in IMG/M
3300018426\|Ga0181566_10501895	Not Available	852	Open in IMG/M
3300020165\|Ga0206125_10319893	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	577	Open in IMG/M
3300020175\|Ga0206124_10395559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300020185\|Ga0206131_10173912	Not Available	1093	Open in IMG/M
3300020185\|Ga0206131_10302282	Not Available	715	Open in IMG/M
3300020185\|Ga0206131_10331171	Not Available	666	Open in IMG/M
3300020188\|Ga0181605_10324869	Not Available	636	Open in IMG/M
3300020194\|Ga0181597_10373367	Not Available	609	Open in IMG/M
3300020194\|Ga0181597_10470291	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Vibrio phage 2.275.O._10N.286.54.E11	510	Open in IMG/M
3300020274\|Ga0211658_1075998	Not Available	676	Open in IMG/M
3300020438\|Ga0211576_10603516	Not Available	546	Open in IMG/M
3300020467\|Ga0211713_10431040	Not Available	639	Open in IMG/M
3300020478\|Ga0211503_10070700	Not Available	2113	Open in IMG/M
3300020595\|Ga0206126_10013740	Not Available	5967	Open in IMG/M
3300021356\|Ga0213858_10050848	All Organisms → Viruses → Predicted Viral	2006	Open in IMG/M
3300021364\|Ga0213859_10123843	All Organisms → Viruses → Predicted Viral	1222	Open in IMG/M
3300021958\|Ga0222718_10015401	All Organisms → cellular organisms → Bacteria → Proteobacteria	5460	Open in IMG/M
3300021958\|Ga0222718_10016088	All Organisms → cellular organisms → Bacteria	5319	Open in IMG/M
3300021964\|Ga0222719_10807576	Not Available	515	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10131244	All Organisms → Viruses → Predicted Viral	1348	Open in IMG/M
3300023110\|Ga0255743_10218014	Not Available	1033	Open in IMG/M
3300023119\|Ga0255762_10307936	Not Available	820	Open in IMG/M
3300023178\|Ga0255759_10208677	Not Available	1284	Open in IMG/M
3300024191\|Ga0228636_1040374	Not Available	1126	Open in IMG/M
3300024221\|Ga0228666_1073468	Not Available	665	Open in IMG/M
3300024228\|Ga0228633_1011334	All Organisms → Viruses → Predicted Viral	2580	Open in IMG/M
3300024228\|Ga0228633_1038616	Not Available	1244	Open in IMG/M
3300024229\|Ga0233402_1137627	Not Available	502	Open in IMG/M
3300024231\|Ga0233399_1117085	Not Available	596	Open in IMG/M
3300024236\|Ga0228655_1051451	Not Available	944	Open in IMG/M
3300024237\|Ga0228653_1003627	All Organisms → Viruses → Predicted Viral	3947	Open in IMG/M
3300024281\|Ga0228610_1024175	Not Available	749	Open in IMG/M
3300024291\|Ga0228660_1095809	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	581	Open in IMG/M
3300024328\|Ga0228635_1129096	Not Available	545	Open in IMG/M
3300024332\|Ga0228659_1076481	Not Available	733	Open in IMG/M
3300024413\|Ga0233393_1041721	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1113	Open in IMG/M
3300024420\|Ga0228632_1045666	Not Available	1024	Open in IMG/M
3300025632\|Ga0209194_1141903	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	572	Open in IMG/M
3300025636\|Ga0209136_1056625	All Organisms → Viruses → Predicted Viral	1286	Open in IMG/M
3300025653\|Ga0208428_1161292	Not Available	594	Open in IMG/M
3300025680\|Ga0209306_1047667	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	1389	Open in IMG/M
3300025690\|Ga0209505_1169417	Not Available	566	Open in IMG/M
3300025695\|Ga0209653_1021755	All Organisms → Viruses → Predicted Viral	2954	Open in IMG/M
3300025696\|Ga0209532_1059117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	1491	Open in IMG/M
3300025701\|Ga0209771_1058252	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300025701\|Ga0209771_1067955	All Organisms → Viruses → Predicted Viral	1257	Open in IMG/M
3300025705\|Ga0209374_1025511	All Organisms → Viruses → Predicted Viral	2533	Open in IMG/M
3300025705\|Ga0209374_1205694	Not Available	515	Open in IMG/M
3300025712\|Ga0209305_1228759	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Candidatus Nitrosopelagicus → unclassified Candidatus Nitrosopelagicus → Candidatus Nitrosopelagicus sp.	535	Open in IMG/M
3300025751\|Ga0208150_1181589	Not Available	656	Open in IMG/M
3300025759\|Ga0208899_1011544	All Organisms → Viruses → Predicted Viral	4857	Open in IMG/M
3300025771\|Ga0208427_1237464	Not Available	565	Open in IMG/M
3300025849\|Ga0209603_1076716	Not Available	1594	Open in IMG/M
3300026085\|Ga0208880_1121406	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	556	Open in IMG/M
3300026447\|Ga0247607_1078816	Not Available	582	Open in IMG/M
3300026447\|Ga0247607_1081482	Not Available	572	Open in IMG/M
3300026458\|Ga0247578_1093757	Not Available	588	Open in IMG/M
3300026471\|Ga0247602_1075113	Not Available	908	Open in IMG/M
3300026500\|Ga0247592_1034182	Not Available	1240	Open in IMG/M
3300026506\|Ga0228604_1073277	Not Available	575	Open in IMG/M
3300027234\|Ga0208170_1054176	Not Available	793	Open in IMG/M
3300027416\|Ga0207994_1110365	Not Available	552	Open in IMG/M
3300027833\|Ga0209092_10004304	Not Available	11956	Open in IMG/M
3300028008\|Ga0228674_1039278	Not Available	1851	Open in IMG/M
3300028110\|Ga0247584_1042630	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1138	Open in IMG/M
3300028111\|Ga0233397_1124202	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	622	Open in IMG/M
3300028127\|Ga0233401_1012667	All Organisms → Viruses → Predicted Viral	2274	Open in IMG/M
3300028129\|Ga0228634_1040240	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1243	Open in IMG/M
3300028134\|Ga0256411_1061656	All Organisms → Viruses → Predicted Viral	1284	Open in IMG/M
3300028189\|Ga0257127_1086950	Not Available	939	Open in IMG/M
3300028196\|Ga0257114_1036061	All Organisms → Viruses → Predicted Viral	2285	Open in IMG/M
3300028273\|Ga0228640_1073081	Not Available	669	Open in IMG/M
3300028280\|Ga0228646_1067679	Not Available	882	Open in IMG/M
3300028333\|Ga0247595_1052613	Not Available	675	Open in IMG/M
3300029448\|Ga0183755_1068486	Not Available	805	Open in IMG/M
3300031597\|Ga0302116_1005024	Not Available	7119	Open in IMG/M
3300032820\|Ga0310342_102919579	Not Available	570	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.55%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.45%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	26.81%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	22.46%
Pelagic	Environmental → Aquatic → Marine → Pelagic	18.84%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.87%
Oceanic	Environmental → Aquatic → Marine → Oceanic	7.97%
Strait	Environmental → Aquatic → Marine → Strait	5.07%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.35%
Inlet	Environmental → Aquatic → Marine → Inlet	2.17%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	26.81%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	18.84%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	11.59%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.87%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	7.97%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.52%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.07%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.45%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	22.46%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	14.49%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	11.59%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	7.25%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.52%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.80%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.07%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.35%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	4.35%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.35%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.62%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.17%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.45%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.45%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.45%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.72%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.72%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.72%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.72%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2236876005	Estuarine microbial communities from Columbia River, sample from South Channel ETM site, GS313-3LG-ETM-15m	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300003346	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA	Environmental	Open in IMG/M
3300003620	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007862	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2um	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009003	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300016748	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011502CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020274	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020467	Marine microbial communities from Tara Oceans - TARA_B100000945 (ERX555966-ERR598957)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023110	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300024191	Seawater microbial communities from Monterey Bay, California, United States - 45D	Environmental	Open in IMG/M
3300024221	Seawater microbial communities from Monterey Bay, California, United States - 80D	Environmental	Open in IMG/M
3300024228	Seawater microbial communities from Monterey Bay, California, United States - 41D	Environmental	Open in IMG/M
3300024229	Seawater microbial communities from Monterey Bay, California, United States - 54D	Environmental	Open in IMG/M
3300024231	Seawater microbial communities from Monterey Bay, California, United States - 43D	Environmental	Open in IMG/M
3300024236	Seawater microbial communities from Monterey Bay, California, United States - 67D	Environmental	Open in IMG/M
3300024237	Seawater microbial communities from Monterey Bay, California, United States - 65D	Environmental	Open in IMG/M
3300024281	Seawater microbial communities from Monterey Bay, California, United States - 11D	Environmental	Open in IMG/M
3300024291	Seawater microbial communities from Monterey Bay, California, United States - 74D	Environmental	Open in IMG/M
3300024328	Seawater microbial communities from Monterey Bay, California, United States - 44D	Environmental	Open in IMG/M
3300024332	Seawater microbial communities from Monterey Bay, California, United States - 73D	Environmental	Open in IMG/M
3300024413	Seawater microbial communities from Monterey Bay, California, United States - 21D	Environmental	Open in IMG/M
3300024420	Seawater microbial communities from Monterey Bay, California, United States - 40D	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025636	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025690	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes)	Environmental	Open in IMG/M
3300025695	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025701	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025705	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m (SPAdes)	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300026085	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026447	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 125R_r (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026458	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 36R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026471	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 77R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026500	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026506	Seawater microbial communities from Monterey Bay, California, United States - 4D	Environmental	Open in IMG/M
3300027234	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02 (SPAdes)	Environmental	Open in IMG/M
3300027416	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757 (SPAdes)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028110	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 43R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028111	Seawater microbial communities from Monterey Bay, California, United States - 35D	Environmental	Open in IMG/M
3300028127	Seawater microbial communities from Monterey Bay, California, United States - 49D	Environmental	Open in IMG/M
3300028129	Seawater microbial communities from Monterey Bay, California, United States - 42D	Environmental	Open in IMG/M
3300028134	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028189	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_135m	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300028273	Seawater microbial communities from Monterey Bay, California, United States - 51D	Environmental	Open in IMG/M
3300028280	Seawater microbial communities from Monterey Bay, California, United States - 58D	Environmental	Open in IMG/M
3300028333	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 60R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031597	Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCM	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
none_1008754	2236876005	Marine Estuarine	VAVRITGCVVALATASWGWLALGFLVGEVLGIVEEL
JGI20152J14361_100902181	3300001344	Pelagic Marine	SMVKSIVRIAGCAAVLFGGGIIWLAGGLLVAELLGIAEEL*
JGI20151J14362_101402832	3300001346	Pelagic Marine	KSIVRIAGCAAVLFGGGIIWLAGGLLVAELLGIAEEL*
JGI20157J14317_100541433	3300001352	Pelagic Marine	MQYGKIEPKDPSKKHFYISLVKSATRIAGCVVALATGAWGWLAAGLLVAELLGIAEEL*
JGI20157J14317_101174993	3300001352	Pelagic Marine	LGISRQSSGEAIMPIPERVYVPEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL*
JGI24006J15134_102399741	3300001450	Marine	MAEPVDVSKKHFYISLVKSSIRIAGCVVALFTGSLVWLAVGLLV
JGI24004J15324_100326431	3300001472	Marine	AIRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL*
JGI26081J50195_10258086	3300003346	Marine	SKKHFYISLVKSATRIAGCTVALITGAWGYMALGLLVAEVLGIAEEL*
JGI26273J51734_100372672	3300003620	Marine	MAEPVDPSKKHFYISLVKSAVRITGCVVALATASWGWLALGFLVGEVLGIVEEL*
Ga0055584_1000321667	3300004097	Pelagic Marine	MPIPERVYVPEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL*
Ga0066605_100405531	3300004279	Marine	SKRHFQISMVKSAVRITGCFFCLYTADATWLASGFLVGELLGIAEEL*
Ga0066605_101808753	3300004279	Marine	MELKDPSKRHFQISMVKSAVRIAGCLFALFTADVIWLASGFLVGELLGIAEE
Ga0066865_101547931	3300005523	Marine	PVDVSKKHFYISLVKSGVRIAGCVVALATGSWGWLAGGFLVAELLGIAEEL*
Ga0066377_100317573	3300005934	Marine	MEPKDPSKRHFQISMIKSAVRIAGCLFCLFTLDVAWLASGFLVGELLGIAEEL*
Ga0070743_100805291	3300005941	Estuarine	HFYISLVKSAVRITGCVVALATASWGWLALGFLVGEVLGIVEEL*
Ga0075462_101674882	3300006027	Aqueous	MEPKDPSKRHFQISMVKSAVRIAGCLFCLFTLDVTWLASGFLVGELLGIAEEL*
Ga0098055_13497353	3300006793	Marine	MAEPVDPSKKHFYISLVKSATRIAGCVIALATGAWGWLALGLLVAEVLG
Ga0102820_10398652	3300007554	Estuarine	MAEPVDPSKKHFYISLVKSAVRITGCVVALATASWGWLALGFLVGEILGIVEEL*
Ga0102820_11007961	3300007554	Estuarine	FYISLVKSAIRIAGCVVALFTGSIFWLATGLLVAELLGIAEEL*
Ga0102821_11931123	3300007557	Estuarine	MPGAPEPKDPSKKHFYISLVKSAIRIAGCVVALFTGSIF
Ga0102855_12030731	3300007647	Estuarine	SKKHFYISLVKSAIRIAGCVAALATGSWGWLAAGLLIAEILGIAEEL*
Ga0105737_11437973	3300007862	Estuary Water	QSSGEAIMPIPERVYVPEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL*
Ga0102960_10370742	3300009000	Pond Water	MEPVDPSQKHFWISMAKSGVRIAGCLIAILTGSVVWLAGGFLIAEILGIAEEL*
Ga0102960_11256093	3300009000	Pond Water	MPIPERVYVPQPADPSRKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIVE
Ga0102813_10356481	3300009003	Estuarine	PVDVSKKHFYISLVKSAVRITGCVVALATASWGWLALGFLVGEVLGIVEEL*
Ga0115566_103523961	3300009071	Pelagic Marine	PIPERVYVPEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL*
Ga0115552_11382911	3300009077	Pelagic Marine	MEYGKIEPKDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL*
Ga0102814_1000930319	3300009079	Estuarine	MAEPVDVSKKHFYISLVKSATRIAGCTVALITGAWGYMA
Ga0102814_105622533	3300009079	Estuarine	ERVTMPGAPEPKDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL*
Ga0115551_11617954	3300009193	Pelagic Marine	GEAIMPIPERVYVPEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL*
Ga0115551_13507961	3300009193	Pelagic Marine	MEPVDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVA
Ga0115545_12076033	3300009433	Pelagic Marine	SLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL*
Ga0115556_12927861	3300009437	Pelagic Marine	KKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL*
Ga0115557_11300793	3300009443	Pelagic Marine	MQYGKIEPKDPSKKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL*
Ga0115553_14057741	3300009445	Pelagic Marine	MPIPERVTMPGAPEPKDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL*
Ga0115555_11309491	3300009476	Pelagic Marine	IPERVYVPEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL
Ga0115570_104178591	3300009496	Pelagic Marine	GEKIMPIPERVTMPGAPEPKDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL*
Ga0115569_104249671	3300009497	Pelagic Marine	VSKKHFYISMVKSIVRIAGCAVVLFGGGIIWLAGGLLVAELLGIAEEL*
Ga0115564_103868181	3300009505	Pelagic Marine	MPIPERVYVPEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGI
Ga0115572_100760641	3300009507	Pelagic Marine	KHFYISIIKSTLRIGACAIALYTGSIVWLASGFLIAELLGIAEEL*
Ga0115572_105410442	3300009507	Pelagic Marine	MIMAEPVDVSKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIA
Ga0115567_109566162	3300009508	Pelagic Marine	MAEPVDPSKKHFYISLAKSATRIAGCVIALATGAWGWLAAGLLVAEILGIAEEL*
Ga0115104_101154982	3300009677	Marine	KDPSKKHFYISLVKSATRIAGCVVALFTGSIVWLAGGLLVAELLGIAEEL*
Ga0163179_1001425811	3300012953	Seawater	MPIPERVFIPASKDPGQKHFYISLIKSGIRILGCVVALFTGSILWLAGGFLLGEILGIAEEL*
Ga0182043_12462862	3300016748	Salt Marsh	FYISLVKSAVRIAGCAVCLYTGSVVWLASGFLVAELLGIAEEL
Ga0181369_10382721	3300017708	Marine	VSEPVDVSKKHFYISLVKSATRIVGCSVALATASWGWMAVGLLV
Ga0181390_11677632	3300017719	Seawater	MQYGKIEPKDPSKKHFYISLVKSAIRIAGCVVALAT
Ga0181399_10379887	3300017742	Seawater	DPSKKHFYISLVKSAVRIAGCVVALATGSWGWLALGFLVGEILGIVEEL
Ga0181389_10349084	3300017746	Seawater	LQMAEPVDPSKKHFYISLVKSVVRIAGCVVALATGAWGWLALGFLIGEILGIVEEL
Ga0181395_12538041	3300017779	Seawater	MAEPVDPSKKHFYISLVKSVVRIAGCVVALATGAWGWLALGFLIGEILGIAEEL
Ga0181380_10117524	3300017782	Seawater	MELKDPSKRHFQISMVKSAIRIVGCFFCLYTADATWLASGFLVGEILGIAEEL
Ga0181379_10084981	3300017783	Seawater	ISLVKSAIRIAGCVVALFTGSIVWLAGGLLVAELLGIAEEL
Ga0181379_11154711	3300017783	Seawater	KHFYISLVKSAVRIAGCVVALATGSWGWLALGFLVGEILGIVEEL
Ga0181584_102345494	3300017949	Salt Marsh	MPIPERVYVPEPADISRKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL
Ga0181583_109244701	3300017952	Salt Marsh	DVSKKHFYISMVKSAVRIAGCVLTLYTGHIFWLASGFLVAEFLGIAEEL
Ga0181571_104533684	3300017957	Salt Marsh	MAEPVDVSKKHFYISMVKSAVRIAGCAITLYTGHVFWL
Ga0181581_106311301	3300017962	Salt Marsh	MTEPVDPSKKHFYISMIKSAVRIVGCVVALYTGSVFWL
Ga0181589_104785022	3300017964	Salt Marsh	SRKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL
Ga0181600_105312751	3300018036	Salt Marsh	MAEPVDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAV
Ga0181567_100066111	3300018418	Salt Marsh	SAVRIAGCAVCLYTGSVVWLASGFLVAELLGIAEEL
Ga0181591_105886082	3300018424	Salt Marsh	ISLVKSAVRIAGCAVCLYTGSVVWLASGFLVAELLGIAEEL
Ga0181566_105018951	3300018426	Salt Marsh	MTEPVDVSKQHFYISLVKSAVRIAGCAVCLYTGSVVW
Ga0206125_103198931	3300020165	Seawater	KSIVRIAGCAAVLFGGGIIWLAGGLLVAELLGIAEEL
Ga0206124_103955591	3300020175	Seawater	MPEPVDVSKKHFYISMVKSIVRIAGCAAVLFGGGIIWLASGLLVAELLGK
Ga0206131_101739122	3300020185	Seawater	MPIPERVTMPGAPEPKDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL
Ga0206131_103022822	3300020185	Seawater	MPIPERVYVPEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL
Ga0206131_103311711	3300020185	Seawater	MEYGKIEPKDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAE
Ga0181605_103248694	3300020188	Salt Marsh	MSEPVDVSKKHFYISLVKSATRIVGCSVALVTGSWAWMA
Ga0181597_103733673	3300020194	Salt Marsh	KSATRIAGCVVALATGAWGWLALGLLVAEILGIAEEL
Ga0181597_104702911	3300020194	Salt Marsh	MTEPVDVSKKHFYISLVKSAVRIAGCAVCLYTGSVVW
Ga0211658_10759981	3300020274	Marine	YISLVKSGVRIAGCVVALATGSWGWLALGLLVAEVLGIAEEL
Ga0211576_106035161	3300020438	Marine	PEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL
Ga0211713_104310404	3300020467	Marine	KKHFYISMIKSAVRIAGCGVCLLTGSVVWLASGFLVAELLGIAEEL
Ga0211503_100707002	3300020478	Marine	MVVEKKIMERDKHFYISMIKSGMRILGCVVALFTGSVIWLASGLLVAELLGIAEEL
Ga0206126_100137404	3300020595	Seawater	MPDVDIVSKKHFYISMVKSVVRIAGCAAVLLGGGIIWLAGGLLIAELLGIAEEL
Ga0213858_100508482	3300021356	Seawater	MEPVDPSQKHFWISMAKSGVRIAGCLVAILTGSVVWLAGGFLIAEILGIAEEL
Ga0213859_101238431	3300021364	Seawater	DPSKMHFYISLVKSVVRITGCVAVIGGASIFWLAGAFLVAELLGIAEEL
Ga0222718_100154012	3300021958	Estuarine Water	MEPVDPSQKHFWISMAKSGVRIAGCLIAILTGSVVWLAGGFLIAEILGIAEEL
Ga0222718_100160882	3300021958	Estuarine Water	MPIPERITIPGAPEPKDPSKKHFYISLVKSATRIAGCVVALATGAWGWLAAGLLVAEILGIAEEL
Ga0222719_108075762	3300021964	Estuarine Water	MEPKDPSKRHFQISMTKSIVRIAGCLLCLFTADVTWLASGFLVGELLGIAEEL
(restricted) Ga0233432_101312443	3300023109	Seawater	MELKDPSKRHFQISMVKSAVRITGCFFCLYTADATWLASGFLVGELLGIAEEL
Ga0255743_102180141	3300023110	Salt Marsh	KIIIPASKDPSTKHFWISMAKSGVRIAGCLIALFTGSVAWLAGGFLVAEILGIAEEM
Ga0255762_103079362	3300023119	Salt Marsh	VSKKHFYISLVKSAVRIAGCAVCLYTGSVVWLASGFLVAELLGIAEEL
Ga0255759_102086771	3300023178	Salt Marsh	MTEPVDVSKKHFYISLVKSAVRIAGCAVCLYTGSVVWLASGFLV
Ga0228636_10403741	3300024191	Seawater	MAEPVDVSKKHFYISLVKSATRIAGCVVALATGAWGWLALGLLVAEILGI
Ga0228666_10734681	3300024221	Seawater	ISLVKSATRIVGCVAALATGSWGWLAAGLLVAEVLGILEEL
Ga0228633_10113348	3300024228	Seawater	MAEPVDPSKKHFYISLVKSVVRIAGCVVALATGAWGWLALGFLIGEILGIVEEL
Ga0228633_10386166	3300024228	Seawater	DVSKKHFYISLVKSATRIAGCVVALATGAWGWLALGLLVAEILGIAEEL
Ga0233402_11376273	3300024229	Seawater	MSEPVDVSKKHFYISLVKSATRIVGCSVALATGSWGWMAVGLL
Ga0233399_11170851	3300024231	Seawater	MQYGKIEPKDPSKKHFYISLVKSAIRIAGCVVALATSSWGWLALGFLV
Ga0228655_10514514	3300024236	Seawater	HFYISLVKSAIRIAGCVVALATSSWGWLALGFLVAEILGIAEEL
Ga0228653_100362711	3300024237	Seawater	MAEPVDPSKKHFYISLVKSAVRIAGCVVALATGSWGWLALGFL
Ga0228610_10241752	3300024281	Seawater	KHFYISLVKSAIRIAGCVVALFTGSIVWLAGGLLVAELLGIAEEL
Ga0228660_10958091	3300024291	Seawater	SAVRIAGCVVALATGSWGWLALGFLVGEILGIVEEL
Ga0228635_11290962	3300024328	Seawater	KKHFYISLVKSVVRIAGCVVALATGAWGWLALGFLIGEILGIVEEL
Ga0228659_10764811	3300024332	Seawater	LVKSATRIAGCVVALATGAWGWLALGLLVAEILGIAEEL
Ga0233393_10417211	3300024413	Seawater	VSEPVDVSKKHFYISLVKSATRIVGCVAALATGSWGWLAAGLLVAEVLG
Ga0228632_10456663	3300024420	Seawater	MAEPVDVSKKHFYISLVKSAVRIAGCVVALATGAWGWLALGFLIGEIL
Ga0209194_11419032	3300025632	Pelagic Marine	KHFYISMVKSIVRIAGCAAVLFGGGIIWLAGGLLVAELLGIAEEL
Ga0209136_10566251	3300025636	Marine	MAEPVDVSKKHFYISLVKSAVRITGCVVALATASWGWLALGFLV
Ga0208428_11612921	3300025653	Aqueous	YISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL
Ga0209306_10476673	3300025680	Pelagic Marine	KKHFYISMVKSIVRIAGCAAVLLGGGIIWLAGGLLIAELLGIAEEL
Ga0209505_11694171	3300025690	Pelagic Marine	VYVPEPVDVSRKHFYISLVKSATRIAGCVVALFTGSWGWLAAGLLVAEILGIAEEL
Ga0209653_102175512	3300025695	Marine	VLHFYISLVKSATRIAGCTVALITGAWGYMALGLLFAEVLGIAEEL
Ga0209532_10591173	3300025696	Pelagic Marine	MEYGKIEPKDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL
Ga0209771_10582525	3300025701	Marine	ISLVKSAVRIAGCVVALATGSWVWLAAGFLVGELLGIAEEL
Ga0209771_10679551	3300025701	Marine	SATRIAGCVVALATGAWGWLALGLLVAEILGIAEEL
Ga0209374_10255114	3300025705	Marine	MELKDPSKRHFQISMVKSAVRIAGCLFALFTADVIWLASGFLVGELLGIAEEL
Ga0209374_12056942	3300025705	Marine	SKKHFYISLVKSAIRIAGCVAALATGSWGWLAAGLLVAEILGIAEEL
Ga0209305_12287591	3300025712	Pelagic Marine	FYISMVKSIVRIAGCAAVLFGGGIIWLAGGLLVAELLGIAEEL
Ga0208150_11815893	3300025751	Aqueous	MAEPVDPSKKHFYISLVKSATRIAGCVVALATGSWGWLAVG
Ga0208899_10115447	3300025759	Aqueous	MEPKDPSKRHFQISMVKSAVRIAGCLFCLFTLDVTWLASGFLVGELLGIAEEL
Ga0208427_12374641	3300025771	Aqueous	VDISKKHFYISLVKSATRIAGCVVALATGSWGWLAAGLLVAEILGIAEEL
Ga0209603_10767165	3300025849	Pelagic Marine	MQYGKIEPKDPSKKHFYISLVKSATRIAGCVVALATGAWGWLAAGLLVAELLGIAEEL
Ga0208880_11214063	3300026085	Marine	MEPKDPSKRHFQISMIKSAVRIAGCLFCLFTLDVAWLASGFLVGELLGIAEELXMFPQKLFGIIH
Ga0247607_10788161	3300026447	Seawater	SAIRIAGCVVALFTGSIVWLAGGLLVAELLGIAEEL
Ga0247607_10814821	3300026447	Seawater	VKSATRIVGCVAALATGSWGWLAAGLLVAEVLGILEEL
Ga0247578_10937572	3300026458	Seawater	AIRIAGCVVALFTGSIVWLAGGLLVAELLGIAEEL
Ga0247602_10751131	3300026471	Seawater	MAEPVDVSKKHFYISLVKSAVRIVGCVVALATGAWGWLALGFLIG
Ga0247592_10341822	3300026500	Seawater	MAEPVDPSKKHFYISLVKSATRIAGCVIALATGAWGWLALGLLVAQVLGIVAGL
Ga0228604_10732771	3300026506	Seawater	MAEPVDVSKKHFYISLVKSAVRIAGCVVALATGAWGWLALGFLIGEILGI
Ga0208170_10541761	3300027234	Estuarine	YISLVKSAIRIAGCVVALFTGSIFWLATGLLVAELLGIAEEL
Ga0207994_11103651	3300027416	Estuarine	AIRIAGCVVALFTGSIFWLATGLLVAELLGIAEEL
Ga0209092_100043041	3300027833	Marine	SKKHFYISLVKSAIRIAGCVVALFTGSIVWLAGGLLVAELLGIAEEL
Ga0228674_10392787	3300028008	Seawater	SKKHFYISLVKSAIRIAGCVAALATGSWGWLAAGLLIAEILGIAEEL
Ga0247584_10426303	3300028110	Seawater	MAEPVDPSKKYFYISLVKSAVRIAGCVVALATGSWGWLALGFLVGEILGIVEEL
Ga0233397_11242021	3300028111	Seawater	LVKSAVRIAGCVVALATGSWGWLALGFLVGEILGIVEEL
Ga0233401_10126671	3300028127	Seawater	MKIANKDPGKFHFYISLVKSVVRITGCVVALATASWGWLALGFLVGEVLGIVEEL
Ga0228634_10402405	3300028129	Seawater	SLVKSAVRIAGCVVAVATGSWGWLAAGLLVGELLGIAEEL
Ga0256411_10616561	3300028134	Seawater	VSKKHFYISLVKSAVRIAGCVVALATGAWGWLALGFLIGEILGIAEEL
Ga0257127_10869501	3300028189	Marine	ERVYVPEPVDVSRKHFYISLIKSATRIAGCVVALFTGSIVWLASGLLVAELLGIAEEL
Ga0257114_10360619	3300028196	Marine	YISLVKSAIRIAGCVAALATGSWGWLAAGLLVAEILGIAEEL
Ga0228640_10730811	3300028273	Seawater	MAEPVDVSKKHFYISLVKSATRIAGCVVALATGAWGWLA
Ga0228646_10676791	3300028280	Seawater	MAEPVDPSKKHFYISLVKSAVRIAGCVVALATGSWGWLALGFLVGE
Ga0247595_10526132	3300028333	Seawater	MPIPERVIMPGAPEPKDPSKKHFYISLVKSAVRIAGCVVALATGAWGWLALGFLIGEILGIAEEL
Ga0183755_10684861	3300029448	Marine	MEPVDPSKKHFYISMVKSTIRIAGCLFALFTADVLWLASGFFVGELLGIAEEL
Ga0302116_100502417	3300031597	Marine	MAEPLDVSKKHFYISLVKSATRIAGCIVALATGSWEW
Ga0310342_1029195793	3300032820	Seawater	MEVADPSKKHFQISMVKSTVRIVGCLFALYTADVTWLASGFLVGELLGIAEEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters