Metagenome / Metatranscriptome Family F056128

Overview

Basic Information

• Family ID: F056128
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 138
• Average Sequence Length: 37 residues
• Representative Sequence: EVEHKQGQISQQEYEKTKAALDQTLQRALKRESQKA
• Number of Associated Samples: 126
• Number of Associated Scaffolds: 138

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 97.83 %
• % of genes from short scaffolds (< 2000 bps): 92.03 %
• Associated GOLD sequencing projects: 121
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (83.333 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.043 % of family members)
• Environment Ontology (ENVO): Unclassified (26.087 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (46.377 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 39.06%
  β-sheet: 0.00%
  Coil/Unstructured: 60.94%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01435	Peptidase_M48	36.96
PF07726	AAA_3	2.90
PF01557	FAA_hydrolase	2.17
PF03729	DUF308	2.17
PF01740	STAS	1.45
PF13664	DUF4149	1.45
PF04794	YdjC	1.45
PF13905	Thioredoxin_8	1.45
PF09862	DUF2089	0.72
PF04643	Motilin_assoc	0.72
PF02954	HTH_8	0.72
PF03239	FTR1	0.72
PF02843	GARS_C	0.72
PF16640	Big_3_5	0.72
PF07589	PEP-CTERM	0.72
PF05580	Peptidase_S55	0.72
PF00069	Pkinase	0.72
PF02518	HATPase_c	0.72
PF13620	CarboxypepD_reg	0.72
PF13305	TetR_C_33	0.72
PF00486	Trans_reg_C	0.72
PF00027	cNMP_binding	0.72
PF08532	Glyco_hydro_42M	0.72
PF00696	AA_kinase	0.72
PF05977	MFS_3	0.72
PF00873	ACR_tran	0.72
PF13418	Kelch_4	0.72
PF03583	LIP	0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.90
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	2.17
COG3394	Chitooligosaccharide deacetylase ChbG, YdjC/CelG family	Carbohydrate transport and metabolism [G]	1.45
COG0151	Phosphoribosylamine-glycine ligase	Nucleotide transport and metabolism [F]	0.72
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.72
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.72

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.33 %
Unclassified	root	N/A	16.67 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.33 %
Unclassified	root	N/A	16.67 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.33 %
Unclassified	root	N/A	16.67 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	46.38 %
Unclassified	root	N/A	16.67 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Level 5

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	29.71 %
Unclassified	root	N/A	16.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.25 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	29.71 %
Unclassified	root	N/A	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.25 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	29.71 %
Unclassified	root	N/A	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.25 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.25 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.62 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.25 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.62 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001593|JGI12635J15846_10648673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611
3300005187|Ga0066675_11353451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	523
3300005293|Ga0065715_10419192	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	860
3300005436|Ga0070713_100213090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1750
3300005439|Ga0070711_101953662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	516
3300005446|Ga0066686_10472787	All Organisms → cellular organisms → Bacteria	855
3300005534|Ga0070735_10135115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1535
3300005542|Ga0070732_10141339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1431
3300005542|Ga0070732_10399675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829
3300005566|Ga0066693_10130156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	932
3300005615|Ga0070702_101164467	Not Available	619
3300005841|Ga0068863_100034326	All Organisms → cellular organisms → Bacteria	4833
3300005892|Ga0075275_1004826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1757
3300006047|Ga0075024_100487357	Not Available	644
3300006057|Ga0075026_100528146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	683
3300006059|Ga0075017_100422584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1002
3300006059|Ga0075017_100555491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	875
3300006163|Ga0070715_10016180	All Organisms → cellular organisms → Bacteria → Acidobacteria	2796
3300006175|Ga0070712_101559059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	578
3300006755|Ga0079222_11649444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	611
3300009038|Ga0099829_10732470	All Organisms → cellular organisms → Bacteria	821
3300009089|Ga0099828_11422648	All Organisms → cellular organisms → Bacteria	612
3300009137|Ga0066709_100407832	All Organisms → cellular organisms → Bacteria → Acidobacteria	1887
3300009137|Ga0066709_101927043	All Organisms → cellular organisms → Bacteria	821
3300009156|Ga0111538_12343033	All Organisms → cellular organisms → Bacteria	670
3300009174|Ga0105241_12485213	Not Available	518
3300009524|Ga0116225_1309215	All Organisms → cellular organisms → Bacteria	705
3300009624|Ga0116105_1060414	All Organisms → cellular organisms → Bacteria	888
3300009636|Ga0116112_1114511	All Organisms → cellular organisms → Bacteria	756
3300009683|Ga0116224_10226880	All Organisms → cellular organisms → Bacteria	892
3300009698|Ga0116216_10135467	All Organisms → cellular organisms → Bacteria	1515
3300009839|Ga0116223_10549256	All Organisms → cellular organisms → Bacteria	669
3300010043|Ga0126380_12045107	Not Available	525
3300010046|Ga0126384_11177270	All Organisms → cellular organisms → Bacteria → Acidobacteria	706
3300010049|Ga0123356_13120211	Not Available	577
3300010361|Ga0126378_11918309	All Organisms → cellular organisms → Bacteria	674
3300010366|Ga0126379_11530947	All Organisms → cellular organisms → Bacteria	772
3300010375|Ga0105239_12594262	All Organisms → cellular organisms → Bacteria	591
3300010379|Ga0136449_100650832	All Organisms → cellular organisms → Bacteria → Acidobacteria	1781
3300010379|Ga0136449_103916607	All Organisms → cellular organisms → Bacteria	558
3300010401|Ga0134121_10410093	Not Available	1227
3300011269|Ga0137392_11639958	All Organisms → cellular organisms → Bacteria	501
3300011271|Ga0137393_11084337	All Organisms → cellular organisms → Bacteria	681
3300012096|Ga0137389_10015397	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5235
3300012096|Ga0137389_10316555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323
3300012096|Ga0137389_10616878	Not Available	932
3300012189|Ga0137388_12034282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	502
3300012199|Ga0137383_10365159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1058
3300012356|Ga0137371_11427122	All Organisms → cellular organisms → Bacteria	506
3300012357|Ga0137384_11068324	All Organisms → cellular organisms → Bacteria	648
3300012361|Ga0137360_10781660	Not Available	821
3300012917|Ga0137395_10331509	Not Available	1082
3300012917|Ga0137395_10546047	All Organisms → cellular organisms → Bacteria → Acidobacteria	836
3300012975|Ga0134110_10297720	All Organisms → cellular organisms → Bacteria	696
3300013105|Ga0157369_10914257	All Organisms → cellular organisms → Bacteria	900
3300013296|Ga0157374_11021800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	846
3300013297|Ga0157378_10174267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2020
3300014167|Ga0181528_10122334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1412
3300014168|Ga0181534_10874013	All Organisms → cellular organisms → Bacteria	536
3300014489|Ga0182018_10333856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819
3300014495|Ga0182015_10954630	All Organisms → cellular organisms → Bacteria	534
3300014657|Ga0181522_10471738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	755
3300015052|Ga0137411_1154770	All Organisms → cellular organisms → Bacteria → FCB group	1041
3300015242|Ga0137412_10501336	Not Available	929
3300015371|Ga0132258_12291670	Not Available	1354
3300016357|Ga0182032_10368639	All Organisms → cellular organisms → Bacteria	1154
3300017924|Ga0187820_1269584	Not Available	552
3300017975|Ga0187782_10775950	All Organisms → cellular organisms → Bacteria → Acidobacteria	741
3300018005|Ga0187878_1044840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	2034
3300018057|Ga0187858_10881122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	527
3300018062|Ga0187784_10822842	All Organisms → cellular organisms → Bacteria	741
3300018062|Ga0187784_10827020	Not Available	738
3300018085|Ga0187772_10648604	All Organisms → cellular organisms → Bacteria	754
3300018088|Ga0187771_10804746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797
3300018468|Ga0066662_12547160	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	540
3300019890|Ga0193728_1061421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1805
3300020199|Ga0179592_10074893	All Organisms → cellular organisms → Bacteria → Acidobacteria	1551
3300020580|Ga0210403_11362377	All Organisms → cellular organisms → Bacteria → Acidobacteria	539
3300020581|Ga0210399_11099757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	636
3300021171|Ga0210405_10119902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2078
3300021178|Ga0210408_10672582	Not Available	817
3300021401|Ga0210393_10002885	All Organisms → cellular organisms → Bacteria	14006
3300021403|Ga0210397_10991722	All Organisms → cellular organisms → Bacteria	652
3300021407|Ga0210383_10782557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	817
3300021420|Ga0210394_11650087	All Organisms → cellular organisms → Bacteria	538
3300021474|Ga0210390_10477385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051
3300021475|Ga0210392_11200310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568
3300021478|Ga0210402_11370356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	634
3300021478|Ga0210402_11457579	All Organisms → cellular organisms → Bacteria	612
3300021860|Ga0213851_1322969	Not Available	549
3300022532|Ga0242655_10212989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596
3300025321|Ga0207656_10128285	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1186
3300025454|Ga0208039_1091874	All Organisms → cellular organisms → Bacteria	526
3300025576|Ga0208820_1113783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	646
3300025945|Ga0207679_10779025	All Organisms → cellular organisms → Bacteria	871
3300026322|Ga0209687_1210940	All Organisms → cellular organisms → Bacteria	599
3300026480|Ga0257177_1078288	All Organisms → cellular organisms → Bacteria	534
3300027439|Ga0209332_1081439	All Organisms → cellular organisms → Bacteria	584
3300027629|Ga0209422_1085462	All Organisms → cellular organisms → Bacteria	736
3300027727|Ga0209328_10033191	All Organisms → cellular organisms → Bacteria → Acidobacteria	1587
3300027745|Ga0209908_10122342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	663
3300027821|Ga0209811_10300123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	618
3300027842|Ga0209580_10252456	All Organisms → cellular organisms → Bacteria → Acidobacteria	877
3300027853|Ga0209274_10135372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234
3300027855|Ga0209693_10265183	All Organisms → cellular organisms → Bacteria	841
3300027867|Ga0209167_10735440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538
3300027869|Ga0209579_10688295	All Organisms → cellular organisms → Bacteria	554
3300027875|Ga0209283_10059265	All Organisms → cellular organisms → Bacteria → Acidobacteria	2452
3300027879|Ga0209169_10455034	All Organisms → cellular organisms → Bacteria → Acidobacteria	673
3300027898|Ga0209067_10871765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	528
3300027986|Ga0209168_10502974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	585
3300028047|Ga0209526_10311313	All Organisms → cellular organisms → Bacteria	1063
3300028047|Ga0209526_10591552	All Organisms → cellular organisms → Bacteria	712
3300029889|Ga0246001_1004453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5957
3300030054|Ga0302182_10184278	All Organisms → cellular organisms → Bacteria	896
3300030659|Ga0316363_10276265	All Organisms → cellular organisms → Bacteria	677
3300030760|Ga0265762_1021720	Not Available	1185
3300031057|Ga0170834_112272637	All Organisms → cellular organisms → Bacteria	545
3300031090|Ga0265760_10069583	Not Available	1078
3300031680|Ga0318574_10890078	All Organisms → cellular organisms → Bacteria	521
3300031715|Ga0307476_10959990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	630
3300031754|Ga0307475_10146783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1871
3300031823|Ga0307478_10773138	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	804
3300031823|Ga0307478_11365086	All Organisms → cellular organisms → Bacteria	588
3300031833|Ga0310917_10651944	All Organisms → cellular organisms → Bacteria	714
3300031893|Ga0318536_10710064	All Organisms → cellular organisms → Bacteria	501
3300031918|Ga0311367_12287440	Not Available	517
3300032160|Ga0311301_10002240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	73343
3300032515|Ga0348332_12188200	Not Available	1265
3300032770|Ga0335085_10301794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1897
3300032782|Ga0335082_10099148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2891
3300032783|Ga0335079_10462491	Not Available	1358
3300032892|Ga0335081_12027276	Not Available	613
3300032898|Ga0335072_10611608	Not Available	1092
3300032898|Ga0335072_11068838	All Organisms → cellular organisms → Bacteria	732
3300033004|Ga0335084_10813872	All Organisms → cellular organisms → Bacteria → Acidobacteria	948
3300033561|Ga0371490_1121365	Not Available	672
3300033829|Ga0334854_021037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1580

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.30%
Host-Associated	Host-Associated	8.70%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.71%
Aquatic	Environmental → Aquatic	11.59%
Plants	Host-Associated → Plants	7.97%
Arthropoda	Host-Associated → Arthropoda	0.72%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.36%
Freshwater	Environmental → Aquatic → Freshwater	7.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.07%
Sediment	Environmental → Aquatic → Sediment	3.62%
Peat	Environmental → Terrestrial → Peat	3.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.90%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.72%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.59%
Loam	Environmental → Terrestrial → Soil → Loam	10.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.32%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.45%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.72%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.72%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated
3300010379	Sb_50d combined assembly	Environmental
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental
3300031918	III_Fen_N3 coassembly	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_106486731	3300001593	Forest Soil	QLEVDRQQGNISQQEYDKHRAALDQTLERALKREAQKA*
Ga0066675_113534511	3300005187	Soil	KDEMFQLEVEHKQGLMSQQEYEQARAALDQTLARAIRRAALK*
Ga0065715_104191922	3300005293	Miscanthus Rhizosphere	DELFQLEVEHKQGDISQQEYERARAALEQTLERALKRSAVK*
Ga0070713_1002130904	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FELEVEHKQGRISQEEYEKTKAALDQTLQRALSRESQKA*
Ga0070711_1019536621	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FQLEVERQQGSITQQEYEKHKAALDQTLQRAISRTAQRV*
Ga0066686_104727872	3300005446	Soil	LEVEHKQGHISQQEYEKAKAALDQTLERALKRNAARTSA*
Ga0070735_101351152	3300005534	Surface Soil	FELEVEHKQGRISQQEYEQTKAALDQTLQRALKRENQKA*
Ga0070732_101413393	3300005542	Surface Soil	LEVEHKQGKITQQEYEKAKAALDGTLERAIKRESQKV*
Ga0070732_103996752	3300005542	Surface Soil	LEVEHKQGRISQQEYEKTKSALDQTLQRALKREAQRT*
Ga0066693_101301561	3300005566	Soil	EHKQGQISQQEYEKTKAALDQTLQRALKRESQKA*
Ga0070702_1011644671	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	FQLEIERQQGQISQQEYETQKAALDQTLKRALARTARNS*
Ga0068863_1000343266	3300005841	Switchgrass Rhizosphere	LFQLEMEHKQGSISQEEYAKAKTALDQTLERALKRKPMA*
Ga0075275_10048263	3300005892	Rice Paddy Soil	LEIERQQGAISQEEYEKHKSALDQTLQRALSRAGKG*
Ga0075024_1004873572	3300006047	Watersheds	EHKQGKITQQEYEKAKAALDGTLERAIKRDAQNV*
Ga0075026_1005281462	3300006057	Watersheds	EVEHKQGSISHQEYERARAALDQTLERALKRAAVK*
Ga0075017_1004225841	3300006059	Watersheds	HKQGRISQQEYEKTKSALDQTLQRALKREAAKQV*
Ga0075017_1005554911	3300006059	Watersheds	EMFQLELERRTGKITQSEYEKTKAALDQTLDRALKRQG*
Ga0070715_100161801	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	EVEHKQGGISQEEYDRARAALDQTLERALKRTASK*
Ga0070712_1015590591	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EVEHKQGKITQQEYEKAKAALDATLERAIKRESQKV*
Ga0079222_116494441	3300006755	Agricultural Soil	DELFQLEVEHKQGSISQQEYEQARAALDQTLDRALKRAVK*
Ga0099829_107324702	3300009038	Vadose Zone Soil	QLEVEHTQGQITDQEYAKTKSALDQTLARAIKRSR*
Ga0099828_114226483	3300009089	Vadose Zone Soil	FQLEVDRKQGNISPQEYEKHRAALEQTLERALKREAQKT*
Ga0066709_1004078323	3300009137	Grasslands Soil	QLEVERKQGNISPQEYEKHRAALDQTLERALKREAQKA*
Ga0066709_1019270431	3300009137	Grasslands Soil	LEVEHKQGRISQQEYEKARAALDQTLERAIKRESQKTK*
Ga0111538_123430331	3300009156	Populus Rhizosphere	ELEVERKQGRLSQEEYDKARSALDHTLERALKRQS*
Ga0105241_124852131	3300009174	Corn Rhizosphere	EVEHKQGQISQQEYEKTKAALDQTLQRALKRESQKA*
Ga0116225_13092151	3300009524	Peatlands Soil	QLEVEHKQGRISQQEYEKTKAALDQTLQRALKRATQKT*
Ga0116105_10604142	3300009624	Peatland	EVERKQGQISQAEYDTAKSALDQTLERALKREAQKA*
Ga0116112_11145112	3300009636	Peatland	EVERKQGQISQADYEKAKSALDQTLDRALKREAQKA*
Ga0116224_102268802	3300009683	Peatlands Soil	FHLEVERQQGRISHQEYETAKSALDQTLQRALKREAQKA*
Ga0116216_101354671	3300009698	Peatlands Soil	LEVERQQGRISHQEYETAKSALDQTLQRALKREAQKA*
Ga0116223_105492561	3300009839	Peatlands Soil	EVEHKQGRISQQEYEKTKAALDQTLQRALKRATQKT*
Ga0126380_120451071	3300010043	Tropical Forest Soil	VEHKQGRISQQEYETTKAALDQTLQRALKRESQRA*
Ga0126384_111772701	3300010046	Tropical Forest Soil	ELEVERKQGKITDEEYEKARAALDYALDRALKRESVSQS*
Ga0123356_131202111	3300010049	Termite Gut	EHKQGRISREEYDKAKAALDQTLEHALKREAAKQS*
Ga0126378_119183092	3300010361	Tropical Forest Soil	EHKRGSISQQEYDKAKAALDQTLERALKRETQKA*
Ga0126379_115309472	3300010366	Tropical Forest Soil	EHKQGHISQQEYEKAKAALDQTLQRALKREAARQT*
Ga0105239_125942622	3300010375	Corn Rhizosphere	ELFQLELEHKQGKISDEEYAKTKSALDQTLARALKRNG*
Ga0136449_1006508321	3300010379	Peatlands Soil	LEMEHKLGKITQQEYEKAKAALDQTLERALKRAK*
Ga0136449_1039166072	3300010379	Peatlands Soil	FQLEVEHKQGRISQQEYEKAKAALDQTLERAVKRGVVKVS*
Ga0134121_104100931	3300010401	Terrestrial Soil	ELFQLELEHKQARISDEDYAKTKAALDQTLARALKRSS*
Ga0137392_116399581	3300011269	Vadose Zone Soil	EVEHTQGDISQQEYERARAALDQTLERALKRAALK*
Ga0137393_110843372	3300011271	Vadose Zone Soil	VERRQGQISQPEYEKAKSALDQTLERALKREAQKA*
Ga0137389_100153977	3300012096	Vadose Zone Soil	LLQLEVERKEDRVSRQEYERARAALDETLERAIKRARPK*
Ga0137389_103165551	3300012096	Vadose Zone Soil	VERKQAQISEAEYQKAKAALDQTLARALKREAQQA*
Ga0137389_106168781	3300012096	Vadose Zone Soil	KQGHLSQEEYEKAKSALDQTLERALKREATAKQT*
Ga0137388_120342821	3300012189	Vadose Zone Soil	LEVERRQGQISQSEYEKAKSALDQTLERALKREAQKA*
Ga0137383_103651591	3300012199	Vadose Zone Soil	EVEHKQGRISQEEYEKSKAALDQTLERALKRKSSTSAM*
Ga0137371_114271222	3300012356	Vadose Zone Soil	LEVERKQGNISPQEYEKHRAALDQTLERALKREAQKA*
Ga0137384_110683242	3300012357	Vadose Zone Soil	FQLEVEHKQGRISQEEYESAKSALDQTVQRALKREAQKA*
Ga0137360_107816602	3300012361	Vadose Zone Soil	EVEHKQGKITQQEYEKAKAALDGTLERAIKREAQKV*
Ga0137395_103315091	3300012917	Vadose Zone Soil	IFQLEMEHKQGQVSDQEYSKAKAALDQTLARAVKRNR*
Ga0137395_105460471	3300012917	Vadose Zone Soil	EVERRQGQISQAEYEKAKSALDQTLERALKREAQRA*
Ga0134110_102977202	3300012975	Grasslands Soil	LEVEHKQGLMSQQEYEQARAALDQTLARAIRRAALK*
Ga0157369_109142572	3300013105	Corn Rhizosphere	ERQQGQISAEEYEKQKSALDQTLKRALARVAKNS*
Ga0157374_110218001	3300013296	Miscanthus Rhizosphere	LFQLEVERKQGKLSQEEYDKARNALDHTLERALKRQA*
Ga0157378_101742673	3300013297	Miscanthus Rhizosphere	FQLEVEHKQGGISQQEYEKAKAALDQTLERALKRAALK*
Ga0181528_101223341	3300014167	Bog	LEIERRQGKITPEDYEKAKAALDQTLDRALKRQS*
Ga0181534_108740132	3300014168	Bog	ERKQGLISQAEYEKAKSALDQTLDRALKREAQKA*
Ga0182018_103338561	3300014489	Palsa	QLEVEHKQGRISQQEYEKAKAALDQTLERAVKRTAVKVS*
Ga0182015_109546302	3300014495	Palsa	EVEHKQGSISQPEYEKARAALDQTLDRAIKRDSQKK*
Ga0181522_104717381	3300014657	Bog	QLEVERKQGKITPAEYEKARAALDQTLDRALKRQQG*
Ga0137411_11547701	3300015052	Vadose Zone Soil	ISQSEYEKAKSALDQTLERALSEARGAEGVKVSTI*
Ga0137412_105013361	3300015242	Vadose Zone Soil	ERKQGQISQAEYDRAKAALDQTLERALKREAQRA*
Ga0132258_122916701	3300015371	Arabidopsis Rhizosphere	VEHKQGRISQQEYESAKSALDQTLQRALKREAQKA*
Ga0182032_103686392	3300016357	Soil	EVEHKQGRISQQEYDKTKAALDQTLQRALKREAQKQT
Ga0187820_12695841	3300017924	Freshwater Sediment	IEHKQGRITQQEYEKTKAALDHTLERALKRENQRA
Ga0187782_107759501	3300017975	Tropical Peatland	VDRKQGEITQAEYDQAKAALDQTLERALRRQAQKA
Ga0187878_10448403	3300018005	Peatland	EIERQQGLISQQDYEKQKAALDQTLQVALARRRTA
Ga0187858_108811222	3300018057	Peatland	QLEVERRQGQISQAEYENAKSAMDKTLERALKREAQKA
Ga0187784_108228421	3300018062	Tropical Peatland	QLEIERKQGKISAEDYEKAKAALDQTLDRALKRQV
Ga0187784_108270202	3300018062	Tropical Peatland	LFQLEVELKQGKITQADYDKAKSALDQTLERALKRLG
Ga0187772_106486041	3300018085	Tropical Peatland	EHKQGRISQQEYEKAKAALDQTLERALKREGRASSAVR
Ga0187771_108047461	3300018088	Tropical Peatland	EHKQGRISQAEYEKAKAALDQTLERAVKRGTTKAG
Ga0066662_125471602	3300018468	Grasslands Soil	FQLEVEHKQGRISQQEYESAKAALDQTLQRALKREAQKTS
Ga0193728_10614211	3300019890	Soil	EVERRQGQISQAEYEKAKSALDQTLERALKREAQRA
Ga0179592_100748933	3300020199	Vadose Zone Soil	LEIDRHQGAISPEEYKTTKAALDQTLARAIQRESRKS
Ga0210403_113623771	3300020580	Soil	EHKQGRISQQEYEKAKAALDQTLERAVKRGAVKVS
Ga0210399_110997571	3300020581	Soil	QLEVEHKQGKITQAEYDKTKAALDQTLERALKRQG
Ga0210405_101199023	3300021171	Soil	VQLEVEHKQGRISQQEYDSAKSALDQTLQRALKREAQKA
Ga0210408_106725822	3300021178	Soil	LEVEHKQGRITQAEYDKAKAALDQTLERAIKRGAVKTS
Ga0210393_1000288510	3300021401	Soil	LFQLEVEHKQGQISQQEYEKTKAALDQTLQHALKREAQKA
Ga0210397_109917221	3300021403	Soil	LEVEHKQGGISQQEYEKARAALDQTLERALKRAALK
Ga0210383_107825571	3300021407	Soil	IFQLEVEHKQGRISQQEYEKAKAALDQTLERAVKRGAVKVG
Ga0210394_116500871	3300021420	Soil	LFDLEVEHKQGRISQQEYEKTKAALDQTLQHALRRESQKA
Ga0210390_104773851	3300021474	Soil	QLEVERRQGQISQSEYESAKSALDQTLDRALKREAQKA
Ga0210392_112003101	3300021475	Soil	LEVEHKQGRISQQEYEKAKAALDQTLERAVKRGAVKVG
Ga0210402_113703561	3300021478	Soil	FQLEVEKKQGKITPEDYEKARAALDQTLDRALKRQG
Ga0210402_114575791	3300021478	Soil	FQLEVEHKQGRISQPEYEKVKAALDQTLERALARSAPK
Ga0213851_13229691	3300021860	Watersheds	QLEVEHKQGSISQQEYEKTKAALDQTLERALKREAAKQT
Ga0242655_102129891	3300022532	Soil	ELFDLEVEHKQGRISQQEYEMTKAALDQTLQRALKREAQRT
Ga0207656_101282851	3300025321	Corn Rhizosphere	QLEVERQQGSITQQEYEKHKAALDQTLQRAISRTAQKV
Ga0208039_10918741	3300025454	Peatland	LEVERKQGLISQAEYEKAKSALDQTLDRALKREAQKA
Ga0208820_11137832	3300025576	Peatland	FQLEIERQQGVITQEDYEKQKAALDQTLKRALARTRRDNV
Ga0207679_107790251	3300025945	Corn Rhizosphere	QLEMEHKQGSISQEEYAKAKTALDQTLERALKRKPMA
Ga0209687_12109401	3300026322	Soil	LDRKQGRITPEEYAKTKTALDQTLDHALKRESQKV
Ga0257177_10782881	3300026480	Soil	FQLEVEHTQGDISQQEYERARAALDQTLERALKRAALK
Ga0209332_10814391	3300027439	Forest Soil	FQLEVERRQGQISQAEYEKAKSALDQTLERALKREAQRA
Ga0209422_10854621	3300027629	Forest Soil	IEHKQGRISQQEYEKTKSALDQTLQRALKREAQKA
Ga0209328_100331911	3300027727	Forest Soil	LFQLEVEHKQGRILQPEYERARAALDQTLDRAIKRAPRK
Ga0209908_101223422	3300027745	Thawing Permafrost	FQLEVERNQGQISQSEYEKAKSALDQTLERALRREAQKA
Ga0209811_103001231	3300027821	Surface Soil	LFELEIEHKQGRISQQEYESAKAALDQTLQRALKRESQKA
Ga0209580_102524561	3300027842	Surface Soil	LKDEIFELEIEHKQGRITQQEYEKTKSALDQTLQRALKREAQKA
Ga0209274_101353721	3300027853	Soil	VEHKQGRISQLEYESAKAALDQTLQRALKRVAPKA
Ga0209693_102651831	3300027855	Soil	QLEMEHKQGKISQQEYEKAKAALDGTLERALKRDAQRN
Ga0209167_107354401	3300027867	Surface Soil	LFQLEVEHKQGHISQQEYEKTKAALDQTLQHALKREAQKA
Ga0209579_106882952	3300027869	Surface Soil	DLEVEHKQGRISQQEYETTKAALDQTLQRALKRESQKA
Ga0209283_100592651	3300027875	Vadose Zone Soil	LEVEHKQGGISRQEYERARAALDQTLERALKRAALK
Ga0209169_104550341	3300027879	Soil	QLEVEHKQGRITQQEYEKAKAALDQTLERAVKRGAVKVG
Ga0209067_108717651	3300027898	Watersheds	DELFDLEVEHKQGLISQQEYEKTKAALDQTLQRALKREAQRT
Ga0209168_105029742	3300027986	Surface Soil	LFQLEVERRQGQISQAEYEKAKSALDQTLERALKREATKV
Ga0209526_103113132	3300028047	Forest Soil	QLEVERRQGQISQSEYEKAKSALDQTLERALKREAQKA
Ga0209526_105915522	3300028047	Forest Soil	KEEIFELEVEHKQGRISQQEYESAKSALDQTLQRALKREGARQT
Ga0246001_10044531	3300029889	Peat	EVERKQGQISQADYERAKSALDQTLDRALKREAQKA
Ga0302182_101842781	3300030054	Palsa	LEVERRQGQISQSEYESAKSALDQTLDRALKREAQKA
Ga0316363_102762652	3300030659	Peatlands Soil	EVEHKQGRISQQEYEKTKAALDQTLQRALKRATQKT
Ga0265762_10217202	3300030760	Soil	VEHKQGRISQQEYEKAKAALDQTLERALKRSAVKVS
Ga0170834_1122726372	3300031057	Forest Soil	FQLEVDHTQGRITQQEYDSAKSALDQTLQRALKREAQKA
Ga0265760_100695832	3300031090	Soil	FQLEVEHKQGQISQQEYEKTKAALDQTLQHALKREAQKA
Ga0318574_108900781	3300031680	Soil	VEHKQGKISQQEYEKAKAALDGTLERAIKRDAQQN
Ga0307476_109599902	3300031715	Hardwood Forest Soil	LEVERRQGQISQAEYEKAKSALDQTLERALKREAQRG
Ga0307475_101467833	3300031754	Hardwood Forest Soil	LEVERKQGKITPADYEKARAALDQTLERALKRQQG
Ga0307478_107731381	3300031823	Hardwood Forest Soil	EIFQLEVEHKQGRISQQEYDSAKSALDQTLQRALKREAQKA
Ga0307478_113650861	3300031823	Hardwood Forest Soil	QLEIEHQQGQISDPEYAKAKSALDQTLSRAIKRKG
Ga0310917_106519441	3300031833	Soil	FQLELEHKQGRISQQEYEKAKSALDQTLERALRRTTSKTT
Ga0318536_107100642	3300031893	Soil	QLEVEHKQGKISQQEYEKAKAALDGTLERAIKRDAQQN
Ga0311367_122874403	3300031918	Fen	ELELERKQGKISPPDYEKARAALDQTLDRALKRKA
Ga0311301_100022401	3300032160	Peatlands Soil	VEHKQGRISQQEYEKAKAALDQTLERAVKRGAIKVTS
Ga0348332_121882002	3300032515	Plant Litter	FQLEVEHKQGRISQQEYEKAKAALDQTLERAVKRGAVKVS
Ga0335085_103017944	3300032770	Soil	QLEVEHKQGRISQAEYEKAKSALDQTLERAIKRVGKS
Ga0335082_100991481	3300032782	Soil	VEHKQGRISQQEYEKAKTALDQTLERALKRTMAKAT
Ga0335079_104624911	3300032783	Soil	LEVEHKQGRISQQEYEKAKAALDQTLERAVKRGTAKVT
Ga0335081_120272761	3300032892	Soil	EVERQQGRISDAEYQSTKSALDQTLLRALARAKGTAHS
Ga0335072_106116081	3300032898	Soil	EHKRGEISQQEYEKAKSALDQTLQRALKRDAARPV
Ga0335072_110688382	3300032898	Soil	IERKQGKISADDYEKAKAALDQTLDRALRRSGLSS
Ga0335084_108138723	3300033004	Soil	QLEIEKEQGKISAEDYESTKAALNQTLRRALQRKNS
Ga0371490_11213651	3300033561	Peat Soil	QLEVERKQGLISQAEYEKAKSALDQTLDRALKREAQKA
Ga0334854_021037_1458_1580	3300033829	Soil	LFQLEVERRQGQISQSEYESAKSALDQTLDRALKREAQKA