Metagenome / Metatranscriptome Family F056124

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056124
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	68 residues
Representative Sequence	MTDLRRGLAVLCLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQATP
Number of Associated Samples	119
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.75 %
% of genes near scaffold ends (potentially truncated)	26.09 %
% of genes from short scaffolds (< 2000 bps)	89.13 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (87.681 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.841 % of family members)
Environment Ontology (ENVO)	Unclassified (26.812 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.797 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.92% β-sheet: 0.00% Coil/Unstructured: 77.08%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF13847	Methyltransf_31	7.97
PF00155	Aminotran_1_2	7.25
PF00890	FAD_binding_2	7.25
PF02604	PhdYeFM_antitox	3.62
PF00873	ACR_tran	2.17
PF04542	Sigma70_r2	1.45
PF04909	Amidohydro_2	1.45
PF02776	TPP_enzyme_N	1.45
PF05721	PhyH	1.45
PF02538	Hydantoinase_B	1.45
PF08281	Sigma70_r4_2	1.45
PF01968	Hydantoinase_A	0.72
PF10518	TAT_signal	0.72
PF08241	Methyltransf_11	0.72
PF01934	HepT-like	0.72
PF00753	Lactamase_B	0.72
PF00529	CusB_dom_1	0.72
PF00210	Ferritin	0.72
PF00593	TonB_dep_Rec	0.72
PF08883	DOPA_dioxygen	0.72
PF01521	Fe-S_biosyn	0.72
PF01609	DDE_Tnp_1	0.72
PF00196	GerE	0.72
PF12831	FAD_oxidored	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	3.62
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	3.62
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	2.90
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.45
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.45
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.45
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.45
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.45
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.72
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.72
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.72
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.72
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.72
COG3805	Aromatic ring-cleaving dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.72
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.72
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	0.72
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.72
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.68 %
Unclassified	root	N/A	12.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.68 %
Unclassified	root	N/A	12.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.68 %
Unclassified	root	N/A	12.32 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	74.64 %
Unclassified	root	N/A	12.32 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	71.01 %
Unclassified	root	N/A	12.32 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	48.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	13.77 %
Unclassified	root	N/A	12.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.17 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	48.55 %
Unclassified	root	N/A	12.32 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	10.14 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
Geminicoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	48.55 %
Unclassified	root	N/A	12.32 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	10.14 %
Geminicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	48.55 %
Unclassified	root	N/A	12.32 %
unclassified Magnetospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum	8.70 %
Geminicoccus flavidas	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus flavidas	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	48.55 %
Unclassified	root	N/A	12.32 %
Magnetospirillum sp. UT-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	8.70 %
Geminicoccus flavidas	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus flavidas	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN02F0WTM	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100631588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1013	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100632132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300002914\|JGI25617J43924_10050441	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300004080\|Ga0062385_10403392	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300004152\|Ga0062386_100037462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3623	Open in IMG/M
3300004153\|Ga0063455_101122383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300005171\|Ga0066677_10080154	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300005174\|Ga0066680_10093711	All Organisms → cellular organisms → Bacteria → Proteobacteria	1828	Open in IMG/M
3300005176\|Ga0066679_10832828	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005177\|Ga0066690_10071186	All Organisms → cellular organisms → Bacteria → Proteobacteria	2176	Open in IMG/M
3300005178\|Ga0066688_10406046	Not Available	883	Open in IMG/M
3300005187\|Ga0066675_10733459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300005332\|Ga0066388_103644723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300005332\|Ga0066388_106863860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300005434\|Ga0070709_10013058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4662	Open in IMG/M
3300005434\|Ga0070709_10230968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus flavidas	1324	Open in IMG/M
3300005436\|Ga0070713_101226110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300005437\|Ga0070710_10116000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1614	Open in IMG/M
3300005445\|Ga0070708_100361951	Not Available	1367	Open in IMG/M
3300005451\|Ga0066681_10802847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300005454\|Ga0066687_10415706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300005467\|Ga0070706_100728607	Not Available	919	Open in IMG/M
3300005471\|Ga0070698_100023109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	6502	Open in IMG/M
3300005560\|Ga0066670_10961231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300005983\|Ga0081540_1067772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1666	Open in IMG/M
3300006028\|Ga0070717_10001720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15262	Open in IMG/M
3300006163\|Ga0070715_10064494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1618	Open in IMG/M
3300006173\|Ga0070716_101710273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300006176\|Ga0070765_100149765	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300006794\|Ga0066658_10942335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300006796\|Ga0066665_10840221	Not Available	719	Open in IMG/M
3300006797\|Ga0066659_10585326	Not Available	905	Open in IMG/M
3300006800\|Ga0066660_10494867	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300006806\|Ga0079220_10230515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1093	Open in IMG/M
3300006854\|Ga0075425_102063910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300006893\|Ga0073928_10223016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1459	Open in IMG/M
3300006954\|Ga0079219_11398848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300007255\|Ga0099791_10508112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	585	Open in IMG/M
3300009137\|Ga0066709_102032193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300009143\|Ga0099792_10178092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1194	Open in IMG/M
3300009143\|Ga0099792_11007273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300009143\|Ga0099792_11193648	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300009147\|Ga0114129_13010518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300010154\|Ga0127503_11231592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	522	Open in IMG/M
3300010162\|Ga0131853_10298387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1702	Open in IMG/M
3300010358\|Ga0126370_10821762	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300010359\|Ga0126376_12129489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300010376\|Ga0126381_103560424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300010856\|Ga0126358_1146334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	556	Open in IMG/M
3300010861\|Ga0126349_1260345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	553	Open in IMG/M
3300010862\|Ga0126348_1020755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	578	Open in IMG/M
3300011120\|Ga0150983_14564821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1100	Open in IMG/M
3300011269\|Ga0137392_10321705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	1280	Open in IMG/M
3300011269\|Ga0137392_10659849	Not Available	867	Open in IMG/M
3300011270\|Ga0137391_10388513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	1194	Open in IMG/M
3300011271\|Ga0137393_10647605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	906	Open in IMG/M
3300012199\|Ga0137383_10814343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300012202\|Ga0137363_10348023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1226	Open in IMG/M
3300012202\|Ga0137363_10373216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1184	Open in IMG/M
3300012205\|Ga0137362_10216012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1653	Open in IMG/M
3300012210\|Ga0137378_10099232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2671	Open in IMG/M
3300012362\|Ga0137361_11071905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300012362\|Ga0137361_11187115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	685	Open in IMG/M
3300012363\|Ga0137390_10208310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1942	Open in IMG/M
3300012409\|Ga0134045_1088055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300012469\|Ga0150984_120982042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300012582\|Ga0137358_10441333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300012917\|Ga0137395_10085815	All Organisms → cellular organisms → Bacteria → Proteobacteria	2064	Open in IMG/M
3300012917\|Ga0137395_10373592	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300012917\|Ga0137395_11231430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300012927\|Ga0137416_10444161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1108	Open in IMG/M
3300012930\|Ga0137407_11226959	Not Available	712	Open in IMG/M
3300012944\|Ga0137410_10801087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	791	Open in IMG/M
3300018431\|Ga0066655_10737001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300018433\|Ga0066667_10081407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2087	Open in IMG/M
3300018468\|Ga0066662_11495418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300020579\|Ga0210407_10006508	All Organisms → cellular organisms → Bacteria → Proteobacteria	8927	Open in IMG/M
3300020579\|Ga0210407_10052794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3038	Open in IMG/M
3300020579\|Ga0210407_10600438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	858	Open in IMG/M
3300020581\|Ga0210399_10184535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1732	Open in IMG/M
3300020581\|Ga0210399_11408441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300021088\|Ga0210404_10333940	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300021170\|Ga0210400_10118109	Not Available	2114	Open in IMG/M
3300021178\|Ga0210408_10601795	Not Available	870	Open in IMG/M
3300021178\|Ga0210408_11248459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300021358\|Ga0213873_10080991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	909	Open in IMG/M
3300021420\|Ga0210394_10174452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1872	Open in IMG/M
3300021420\|Ga0210394_10937078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300021420\|Ga0210394_11611215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300021441\|Ga0213871_10053120	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300021560\|Ga0126371_10421280	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300022504\|Ga0242642_1033885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300022527\|Ga0242664_1158611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300022529\|Ga0242668_1110589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	568	Open in IMG/M
3300022533\|Ga0242662_10194687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300024288\|Ga0179589_10361558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300025922\|Ga0207646_10563910	Not Available	1023	Open in IMG/M
3300025928\|Ga0207700_11276541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300025928\|Ga0207700_11890326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300026312\|Ga0209153_1314796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300026325\|Ga0209152_10231573	Not Available	689	Open in IMG/M
3300026330\|Ga0209473_1071847	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300026331\|Ga0209267_1236768	Not Available	654	Open in IMG/M
3300026369\|Ga0257152_1036566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300026494\|Ga0257159_1041190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300026508\|Ga0257161_1041395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	921	Open in IMG/M
3300026538\|Ga0209056_10716415	Not Available	507	Open in IMG/M
3300026547\|Ga0209156_10080239	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300026550\|Ga0209474_10499223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300027605\|Ga0209329_1023710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1249	Open in IMG/M
3300027698\|Ga0209446_1208818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300027727\|Ga0209328_10056014	Not Available	1210	Open in IMG/M
3300027729\|Ga0209248_10054905	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300027783\|Ga0209448_10107723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300027812\|Ga0209656_10235306	Not Available	873	Open in IMG/M
3300027903\|Ga0209488_10053904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2963	Open in IMG/M
3300028047\|Ga0209526_10081766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2275	Open in IMG/M
3300030839\|Ga0073999_10689418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300030904\|Ga0308198_1038548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300030990\|Ga0308178_1054300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300030997\|Ga0073997_11902804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300030998\|Ga0073996_12139576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	512	Open in IMG/M
3300031023\|Ga0073998_11613075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → unclassified Magnetospirillum → Magnetospirillum sp. UT-4	668	Open in IMG/M
3300031023\|Ga0073998_11630546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300031047\|Ga0073995_11817662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300031057\|Ga0170834_107077338	Not Available	711	Open in IMG/M
3300031091\|Ga0308201_10063869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300031590\|Ga0307483_1037800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300031708\|Ga0310686_104713566	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300031753\|Ga0307477_10121013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1825	Open in IMG/M
3300031896\|Ga0318551_10920228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300031912\|Ga0306921_10514351	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300031954\|Ga0306926_10382606	All Organisms → cellular organisms → Bacteria → Proteobacteria	1738	Open in IMG/M
3300032076\|Ga0306924_10260196	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300032076\|Ga0306924_10421101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1528	Open in IMG/M
3300034680\|Ga0370541_011614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.93%
Host-Associated	Host-Associated	5.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.13%
Aquatic	Environmental → Aquatic	5.80%
Plants	Host-Associated → Plants	4.35%
Arthropoda	Host-Associated → Arthropoda	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.13%
Freshwater	Environmental → Aquatic → Freshwater	5.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.19%
Loam	Environmental → Terrestrial → Soil → Loam	15.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.90%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.45%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030839	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_02172940	2170459013	Grass Soil	NGSMTDLRRGLAVVCLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP
INPhiseqgaiiFebDRAFT_1006315882	3300000364	Soil	MTDLKKGLAXIXLSVLLAGCASVVGDADAGPNPGGGFYDGPNLNVGHINPSRGRFYYQPYTSVGQASP*
INPhiseqgaiiFebDRAFT_1006321322	3300000364	Soil	MTDLKKGLAVICLSVLLAGCASVVGDADAGPNPGGGFYDGPNLNVGHINPSRGRFYYQPYTSVGQASP*
JGI25617J43924_100504411	3300002914	Grasslands Soil	MNDLRSGLAVICLTILLAGCAGAVGDADAGPDPGGGFYDGSNINVGHINPVGGGFRYAPYTSLGQVNP*
Ga0062385_104033921	3300004080	Bog Forest Soil	MNDVKSGLAVICLAVLLAGCAGAVGNADAGPNPGGGFYDGSNINVGQINPSRGGFHYAPYTSLGQANP*
Ga0062386_1000374621	3300004152	Bog Forest Soil	MKTVRSGLAVIFLTMLLGGCASAIGNADAGPDPGGGFYDGSNLNVGQINPVGGGPFYGPYTSVSQAAP*
Ga0063455_1011223832	3300004153	Soil	MTYLGRGLAVFCLSVLLAGCASVVGDADAGPNPGGGFYDGSNINVGHINLSYGGFYNQSYTSVGQATP
Ga0066677_100801542	3300005171	Soil	MDNLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTSLGQVNP*
Ga0066680_100937111	3300005174	Soil	VLLRGTMKRVRLGLAVMFLAMLLDGCASAIGDADAGPDPGGGFYDGPNLKVGHINPVRGGFAYGPYTNVGQAPP*
Ga0066679_108328282	3300005176	Soil	MNNLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTSLGQVNP*
Ga0066690_100711861	3300005177	Soil	MSKFRLGLAVICLGMLLTACASVVGDADAGPDPGGGFYDGPNMNVGHINPSGFHYTPYMSLGQANP*
Ga0066688_104060462	3300005178	Soil	MNNLKNGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTSLGQVNP*
Ga0066675_107334592	3300005187	Soil	MSKFRLGLAVICLRMLLTACASVVGDADAGPDPGGGFYDGPNMNVGHINPSGFHYTPYMSLGQANP*
Ga0066388_1036447232	3300005332	Tropical Forest Soil	MNRIATGLAVVCLTVLLGGCGSVVGNADAGPNPGGGFYDGSNINVGQINPSGGSYAPYTSVGEAYP*
Ga0066388_1068638601	3300005332	Tropical Forest Soil	MTDLRRGLAVICLSVLLAGCASAVGDADAGPNPGGGFYDGPNINVGQINPWRGGIYYQPYTSAGQANP*
Ga0070709_100130583	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VKTMRFGLAVICLAMLLGGCASAIGDADAGPNPGGGFYDGPNINVGHVNPVRGFSYGPYTNLGQAIP*
Ga0070709_102309682	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTYLRRGLAVLCLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP*
Ga0070713_1012261101	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKKIRFRLAVICLVMLLDGCASAIGDADAGPNPGGGFYNGPNMNVGHINPVRGGFFYGPYTNVGQA
Ga0070710_101160004	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLKIGLAAICLSVLLAGCASVVGDADAGPNPGGGFYDGPNINVGHVNPSHGGFYNQPYTSVGQATP*
Ga0070708_1003619512	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKSIRFRLAVICLAMLLDGCASAIGDADAGPNPGGGFYNGPNMNVGHINPVRGGFFYGPYTNVGQAIPPQGLQ*
Ga0066681_108028471	3300005451	Soil	MNDLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTSLGQVNP*
Ga0066687_104157061	3300005454	Soil	MNNLKNGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTSLEQVNP*
Ga0070706_1007286072	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AVICLAMLLDGCASAIGDADAGPNPGGGFYNGPNMNVGHINPVRGGFFYGPYTNVGQAIPPQGLQ*
Ga0070698_1000231096	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKKIRFRLAVICLVMLLDGCASAIGDADAGPNPGGGFYNGPKMNVGHINPVRGGFFYGPYTNVGQAIPPQGLQ*
Ga0066670_109612311	3300005560	Soil	MNDLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTS
Ga0081540_10677723	3300005983	Tabebuia Heterophylla Rhizosphere	MTDFKKGLAVIGLSALLAGCASVVGNADAGPNPGGGFYDGPNLNVGHINPSRGRFYYQPYTSVGQASR*
Ga0070717_100017205	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKKIRFRLAVICLVMLLDGCASAIGDADAGPNPGGGFYNGPNMNVGHINPVRGGFFYGPYTNVGQAIPPQGLQ*
Ga0070715_100644943	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VKTMRFGLTMICLAMLLGGCASAIGDADAGPNPGGGFYDGPNINVGHVNPVRGFSYGPYTNLGQAIP*
Ga0070716_1017102732	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTYLRRGLAILCLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP*
Ga0070765_1001497653	3300006176	Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGGFYNQPYTSVGQATP*
Ga0066658_109423352	3300006794	Soil	MNDLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYMSLGQVNP*
Ga0066665_108402211	3300006796	Soil	KRVRFGLAVMFLAMLLDGCASAIGDADAGPDPGGGFYDGPNLKVGHINPVRGGFAYGPYTNVGQAPP*
Ga0066659_105853261	3300006797	Soil	RGTMKRVRLGLAVMFLAMLLDGCASAIGDADAGPDPGGGFYDGPNLKVGHINPVRGGFAYGPYTNVGQAPP*
Ga0066660_104948672	3300006800	Soil	MNNLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGDFRYAPYTSLGQVNP*
Ga0079220_102305153	3300006806	Agricultural Soil	MTYLGRGLAVVCLSVLLAGCASVVEDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQSYTSIGQAIP*
Ga0075425_1020639101	3300006854	Populus Rhizosphere	MTDLKKGLAVICLSALLAGCAAVVGNADAGPNPGGGFYDGPNLNVGHINPSRGRFYYQPYTSVGQANP*
Ga0073928_102230162	3300006893	Iron-Sulfur Acid Spring	MTDLRSGLAVLCLSVLLAGCASVVGDADAGPNPGGGFYNGPNINVGHINPSYGGFYNQPYTSVGQAPP*
Ga0079219_113988482	3300006954	Agricultural Soil	MLSKARFVLRRSDEKVRFGLAAICLAMLLDGCASAIGDADAGPNPGGGFYDGRNINVGHINPVRGGFSYGPNTNVGQATP*
Ga0099791_105081121	3300007255	Vadose Zone Soil	MNKLRLGLAVVGLTTLLAGCASAVGDADAGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP*
Ga0066709_1020321932	3300009137	Grasslands Soil	MNNLKSGLAVICVAMLLAGCAVSVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTSLGQVNP*
Ga0099792_101780921	3300009143	Vadose Zone Soil	MSDLKIGLAAICLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQSYTSVGQ
Ga0099792_110072731	3300009143	Vadose Zone Soil	MNKLRLGLAVVGLTTLLAGCASAVGDADAGPDPGGGFYYGSNISIGHINPSPGDLYYEPYTSLGQLNP*
Ga0099792_111936482	3300009143	Vadose Zone Soil	CLAVLLAGCAGAAVGDADAGPNPGGGFYDGPNINVGHINPSRGGFHYAPYTSLGQANP*
Ga0114129_130105181	3300009147	Populus Rhizosphere	MTDLKKGLAAICLSVLLAGCASVVGDADAGPNPGGGFYDGPNLNVGHINPSRGRFYYQPYTSVGQASP*
Ga0127503_112315921	3300010154	Soil	LATLLAGCTSVVGDADAGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP*
Ga0131853_102983873	3300010162	Termite Gut	MNRFGIGLVVICLTVLLNGCGSVVGDADAGPNPGGGFYDGNNINVGHINPSSGGLYRAPYTTVGQAY
Ga0126370_108217621	3300010358	Tropical Forest Soil	DDRAWALIGRLSEAAMNRIATGLAVVCLTVLLGGCGSVVGNADAGPNPGGGFYDGSNINVGQINPSGGSYAPDTSVGEAYP*
Ga0126376_121294891	3300010359	Tropical Forest Soil	MNGLSITLPILCLSVLLAGCTTVVGDADVGPNAGGGFYDGPNLNVGHINPSGGGFYYPPYTSLGQANP*
Ga0126381_1035604242	3300010376	Tropical Forest Soil	MSDLAKGVAVLCLSVLLTSCASAIGDADAGPNPGGGFYDGPNLNVGHINPSHGGLYNQPYTSIGQA
Ga0126358_11463341	3300010856	Boreal Forest Soil	MNKLRLGLAVVGLATLLAGCASTVGDADAGPDPGGGFYYGSNISVGHIDPSPGDLYYEPYTSLGQLNP*
Ga0126349_12603452	3300010861	Boreal Forest Soil	MNKLRLGLAVVGLATLLAGCASAVGDADAGPDPGGGFYTGSNMNVGHIDPSPGDLYYEPYTSLGQLNP*
Ga0126348_10207552	3300010862	Boreal Forest Soil	GLAVVGLATLLAGCASAVGDADAGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP*
Ga0150983_145648213	3300011120	Forest Soil	MTDLRRGLAVLCLSVLLAGCASGGGDANAGPDPGGGFYDGPNINVGNINPSHGGFYNQPYTSVGQATP*
Ga0137392_103217051	3300011269	Vadose Zone Soil	MNKLRLGLVVVGLATLLAGCASAVGDADAGPDPGGGYYYGSNISVGHINPSPGDLYYEPYTSLGQLNP*
Ga0137392_106598492	3300011269	Vadose Zone Soil	MNKLRLGLVVVGLATLLAGCASAVGDADAGPDPGGGFYYGSNINVGHINPSPGGLYYEPYTSLGQLNP*
Ga0137391_103885131	3300011270	Vadose Zone Soil	MNKLRLGLVVVGLATLLAGCASAVGDADAGPDPGGGYYYGSNMNVGHINPSRGGLYYEPYTSLGQLNP*
Ga0137393_106476052	3300011271	Vadose Zone Soil	MNKLRLGLVVVGLATLLAGCASAVGDADVGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP*
Ga0137383_108143432	3300012199	Vadose Zone Soil	MNKFRLGLVVVGLATLLAGCASAVGDADVGPDPGGGFYYGSNINVGHINPSPGGPFYQPYTSLGQLNP*
Ga0137363_103480232	3300012202	Vadose Zone Soil	MTDLRRGLAVLCLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQATP*
Ga0137363_103732162	3300012202	Vadose Zone Soil	MKRVRFGLAVMFLAMLLDGCASAIGDADAGPDPGGGFYDGPNLRVGHINPVRGGFAYGPYTSVGQAAP*
Ga0137362_102160122	3300012205	Vadose Zone Soil	MFLAMLLDGCASAIGDADAGPDPGGGFYDGPNLKVGHINPVRGGFAYGPYTNVGQAPP*
Ga0137379_102165371	3300012209	Vadose Zone Soil	MNKFRLGLVVVGLATLLAGCASAVGDADVGPDPGGGFYYGSNINVGHINPSPGGPFYQPCTSLGQLNP*
Ga0137378_100992322	3300012210	Vadose Zone Soil	MNKFRLGLVVVGLATLLAGCASAVGDADVGPDPGGGFYYGSNMNVGHINPSPGSLYYEPYTSLGQLNP*
Ga0137361_110719052	3300012362	Vadose Zone Soil	MNKLRLGLAVAGLAMLLAGCASVVGNADAGPDPGGGFYYGSNMNVGHINPSPGSLYYEPYTSLGQLNP*
Ga0137361_111871152	3300012362	Vadose Zone Soil	MNKFRLGLVVVGLATLLAGCASAVGDADVGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP*
Ga0137390_102083102	3300012363	Vadose Zone Soil	MNKLRLGLVVVGLATLLAGCASAVGDADAGPDPGGGFYYGSNMNVGHINPSRGGLYYEPYTSLGQLNP*
Ga0134045_10880552	3300012409	Grasslands Soil	QRNWDKAMTDVKRGLAVICLSALLAGCSSVVGDADAGPNPGGGFYDGPNVNIGHINPSRAGFYYAPYTSIGQASP*
Ga0150984_1209820421	3300012469	Avena Fatua Rhizosphere	MTYLGRGLAVLCLSVLLAGCASVVGDADAGPNPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP*
Ga0137358_104413332	3300012582	Vadose Zone Soil	MTDLRRGLAVLCLSVLLASCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGGFYNQPYTSVGQATP*
Ga0137395_100858153	3300012917	Vadose Zone Soil	MNKLRLGLAVAGLAMLLAGCASVVGNADAGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP*
Ga0137395_103735922	3300012917	Vadose Zone Soil	MTDLRRGLAVLGLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQATP*
Ga0137395_112314301	3300012917	Vadose Zone Soil	MFLAMLLDGCASEIGDADAGPNPGGGFYDGPNLKVGHINPVRGGFAYGPYTSVGQAPP*
Ga0137416_104441612	3300012927	Vadose Zone Soil	MNKVRFGLAVVGLTTLLAGCASAVGDADAGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLIP*
Ga0137407_112269592	3300012930	Vadose Zone Soil	LVNKLGLGLAVIGLAMPLVGCAGSVVGNADAGPDPGGGFYYSNNLNVGHINPAPGDLFYRPYIDVGQVKPSGGV*
Ga0137410_108010872	3300012944	Vadose Zone Soil	GLAVVGLAMLLAGCASVVGDADAGPDPGGGFYYGSNISIGHINPSPGDLYYEPYTSLGQLNP*
Ga0066655_107370011	3300018431	Grasslands Soil	MNNLKSGLAVICLAMLLAGCAGAVGNVDAGPNPGGGFYDGSNINVGHVNPIGGGFRYAPYTSLGQVNP
Ga0066667_100814073	3300018433	Grasslands Soil	MNNLKSGLAVICLAMLLAGCAGAVGNSDAGPNPGGGFYDGPNINVGHVNPVGGGFRYAPYTSLGQVNP
Ga0066662_114954181	3300018468	Grasslands Soil	MNNLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVRGGFRYAPYTSLGQVNP
Ga0210407_100065085	3300020579	Soil	MSDLKIGLAAICLSVLLAGCASVVGDADAGPNPGGGFYDGPNINVGHVNPSYGGFYNQPYTSVGQATP
Ga0210407_100527944	3300020579	Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGGFYNQPYTSVGQATP
Ga0210407_106004382	3300020579	Soil	MNKLRLGLAVVGLATLLAGCASAVGDADAGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP
Ga0210399_101845353	3300020581	Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGPSYGGFYNQPYTSVGQATP
Ga0210399_114084411	3300020581	Soil	MNDLRRGLAVICLTILLAGCAGAVGDADAGPDPGGGFYDGSNINVGHINPVGGGFRYAPY
Ga0210404_103339402	3300021088	Soil	TVRAFMSRNRSMSDLKIGLAAICLSVLLAGCASVVGDADAGPNPGGGFYDGPNINVGHVNPSYGGFYNQPYTSVGQATP
Ga0210400_101181093	3300021170	Soil	MSDLKIGLAAICLSVLLAGCASVVGDADAGPNPGGGFYDGPNINVGNINPSHGGFYNQPYTSVGQATP
Ga0210408_106017952	3300021178	Soil	MRFGLAVICLAMLLGGCASAIGDADAGPNPGGGFYDGPNINVGHVNPVRGFSYGPYTNLGQAIP
Ga0210408_112484591	3300021178	Soil	MNKLRLGLAVVGLAMLLAGCASVVGDADLGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP
Ga0213873_100809913	3300021358	Rhizosphere	MNRISTGLAVLCLTMLLGGCGSVTGDADAGPNPGGGFYDGSNINVGQINPLGGSTNYAPYTSVGQAYH
Ga0210394_101744523	3300021420	Soil	MSDLKIGLAAICLSVLLAGCASVVGDADAGPNPGGGFYDGPNINVGHVNPSYGGSYNQPYTSVGQATP
Ga0210394_109370781	3300021420	Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGGFYNQPY
Ga0210394_116112151	3300021420	Soil	MNDLRRGLAVICLTILLAGCAGAVGDADAGPDPGGGFYDGSNINVGHINTVGGGFRYAPY
Ga0213871_100531202	3300021441	Rhizosphere	MNRISTGLAVLCLTMLLGGCGSVTGDADAGPNPGGGFYDGSNINVGQINPVGGSTNYAPYTSLGQAYP
Ga0126371_104212802	3300021560	Tropical Forest Soil	MNRIATGLAVVCLTVLLGGCGSVVGNADAGPNPGGGFYDGSNINVGQINPSGGSYAPYTSVGEAYP
Ga0242642_10338851	3300022504	Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGGFYNQPYTSGGQATP
Ga0242664_11586111	3300022527	Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGHISPSYGGFYNQPYTSVGQA
Ga0242668_11105892	3300022529	Soil	MNTLRLGLAVVGLATLLAGCASAVGDADVGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP
Ga0242662_101946871	3300022533	Soil	MTYLRRGLAVLCLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNRPYTSVG
Ga0179589_103615581	3300024288	Vadose Zone Soil	MTDLGRGLAVLCLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP
Ga0207646_105639102	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKSIRFRLAVICLAMLLDGCASAIGDADAGPNPGGGFYNGPNMNVGHINPVRGGFFYGPYTNVGQAIPPQGLQ
Ga0207700_112765412	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTYLRRGLAVLCLSVLLAGCASVVGDAGAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP
Ga0207700_118903261	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKKIRFRLAVICLVMLLDGCASAIGDADAGPNPGGGFYNGPNMNVGHINPVRGGFFYGPYTNVGQAI
Ga0209153_13147961	3300026312	Soil	MSKFRLGLAVICLGMLLTACASVVGDADAGPDPGGGFYDGPNMNVGHINPSGFHYTPYMSLGQANP
Ga0209152_102315731	3300026325	Soil	LRTICITERDKMNNLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYMSLGQVNP
Ga0209473_10718471	3300026330	Soil	MNNLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGDFRYAPYTSLGQVNP
Ga0209267_12367681	3300026331	Soil	MNNLKNGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTSLGQVNP
Ga0257152_10365661	3300026369	Soil	MNKLRLGLAVVGLTTLLAGCASAVGDADAGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTS
Ga0257159_10411902	3300026494	Soil	MTDLRRELAVLCLSMLLAGCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGGFYNQPYTSVGQATP
Ga0257161_10413952	3300026508	Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGHVNPSYGGFYNQPYTSVGQATP
Ga0209056_107164152	3300026538	Soil	KRVRFGLAVMFLAMLLDGCASAIGDADAGPDPGGGFYDGPNLKVGHINPVRGGFAYGPYTNVGQAPP
Ga0209156_100802391	3300026547	Soil	MNNLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTSLGQVNP
Ga0209474_104992231	3300026550	Soil	MDNLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGHVNPVGGGFRYAPYTSLGQVNP
Ga0209329_10237103	3300027605	Forest Soil	SAFVPRNRSMTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGGFYNQPYTSVGQATP
Ga0209446_12088181	3300027698	Bog Forest Soil	MNDLKSGLAVICLAMLVAGCAATVGDADAGPNPGGGFYDGPNINVGQINPSRGGFHYAPYTSLGQANP
Ga0209328_100560142	3300027727	Forest Soil	MTDLRRGLAVLCLSMLLAGCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGGFYNQPYTSVGQATP
Ga0209248_100549052	3300027729	Bog Forest Soil	MNDLKSGLAVICLAMLLAGCAGAVGNADAGPNPGGGFYDGSNINVGQINPSRGGFHYAPYTSLGQANP
Ga0209448_101077232	3300027783	Bog Forest Soil	MNDLKSGLAVICLAMLLAGCAGAVGDADAGPNPGGGFYDGPNINVGQINPSHSGFHYAPYTSLGQANP
Ga0209656_102353062	3300027812	Bog Forest Soil	SGLAVIFLTMLLGGCASAIGNADAGPDPGGGFYDGSNLNVGQINPVGGGPFYGPYTSVSQAAP
Ga0209488_100539042	3300027903	Vadose Zone Soil	MTDLRRGLAVLCLSALLAGCASVVGDADAGPNPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP
Ga0209526_100817663	3300028047	Forest Soil	MNKLRLGLAVVGLATLLAGCASVVGDADVGPDPGGGFYYGSNLNVGHINPSPGDLYYQPYTSLGQLNP
Ga0073999_106894182	3300030839	Soil	MSDLRRGLAVLCLSVLLAGCASVVGDANDGPDPGGGFYDGPNINVGHINPSYGGFYNQPYTSVGQATP
Ga0308198_10385482	3300030904	Soil	MTDLRRGLAVLGLSVLLAGCASVVGDADAGPNPGGGFYDGSNINVGHINPSYGGFYNQSYTSVGQAIP
Ga0308178_10543001	3300030990	Soil	MTDLRRGLAVVCLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP
Ga0073997_119028041	3300030997	Soil	MNKLRLGLAVTCLAMLLAGCASAVGDANAGPDPGGGFYDGPNLNVGQINPSRGGFRYEPYTSVGQVNP
Ga0073996_121395761	3300030998	Soil	PMNKLRLGLAVVGLATLLAGCASAVGDADAGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP
Ga0073998_116130752	3300031023	Soil	PMNKLRLGLAVVGLTTLLAGCASAVGDADAGPDPGGGFYYGSNISVGHINPSPGDLYYEPYTSLGQLNP
Ga0073998_116305461	3300031023	Soil	MSDLRRGLAVLCLSVLLAGCASVVGDANDGPDPGGGFYDGPNINVGHINPSYGGFYNQP
Ga0073995_118176621	3300031047	Soil	MTDLRRGPAVLCLSVLLAGCASVVGDADAGPDPGGGFYDGPNINVGHVNPSYGGFYNQPYTSVGQATP
Ga0170834_1070773381	3300031057	Forest Soil	MKTVRSGLAVIFLTMLLGGCASAVGDADAGPDPGGGFYDGSNLNVGHVNPVGGGHFYGSYISVGQATP
Ga0308201_100638692	3300031091	Soil	MADLRRGLAVLCLSVLLAGCASVVGDADAGPDPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP
Ga0307483_10378001	3300031590	Hardwood Forest Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGQINPSSGGFYNQPYTSVGQATP
Ga0310686_1047135662	3300031708	Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYEGPNINVGHINPSYGGFYNQPYTSVGQATP
Ga0307477_101210132	3300031753	Hardwood Forest Soil	MTDLRRGLAVLCLSVLLAGCASVVGDANAGPDPGGGFYDGPNINVGHINPSYGGFYNQPFTSVGQATP
Ga0318551_109202282	3300031896	Soil	LAMLLAGCAGAVGDAGAGPNPGGGFYDGANINVGQINPSRGGFHYAPYPSLGQAYP
Ga0306921_105143512	3300031912	Soil	DRLTLPETIRERPMNNLKTELAVICLAMLLAGCAGAVGDAGAGPNPGGGFYDGANINVGQINPSRGGFHYAPYPSLGQAYP
Ga0306926_103826063	3300031954	Soil	MNDLKNGLAVICLAMLLAGCAGVVGNADAGPDPGGGFYDGSNINVGHINPSRGGFQYAPYTSLGPANP
Ga0306924_102601962	3300032076	Soil	LAVICLAMLLAGCAGAVGDAGAGPNPGGGFYDGANINVGQINPSRGGFHYAPYPSLGQAY
Ga0306924_104211012	3300032076	Soil	MNNLKSGLAVICLAMLLAGCARAVGDADAGPNPGGGFYDGSNINVGQINPSRGGFHYTPYTSVGQMNP
Ga0370541_011614_50_256	3300034680	Soil	MTDLRRGLAVLGLSVLLAGCASVVGDADAGPNPGGGFYDGSNINVGHINPSYGGFYNQPYTSVGQAIP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056124

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences