Metagenome / Metatranscriptome Family F056105

Basic Information
Family ID	F056105
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	50 residues
Representative Sequence	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Number of Associated Samples	114
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.39 %
% of genes near scaffold ends (potentially truncated)	47.10 %
% of genes from short scaffolds (< 2000 bps)	86.23 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (52.899 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (18.841 % of family members)
Environment Ontology (ENVO)	Unclassified (35.507 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.043 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 86.54% β-sheet: 0.00% Coil/Unstructured: 13.46%
Feature Viewer

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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF17200	sCache_2	9.42
PF00072	Response_reg	8.70
PF09361	Phasin_2	7.97
PF04226	Transgly_assoc	1.45
PF07369	DUF1488	1.45
PF06863	DUF1254	0.72
PF13704	Glyco_tranf_2_4	0.72
PF12833	HTH_18	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.45
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
All Organisms	root	All Organisms	47.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
cellular organisms	root	All Organisms → cellular organisms	46.38 %
Viruses	superkingdom	All Organisms → Viruses	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.96 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.81 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.09 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	9.42 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.90 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	7.25 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.90 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.45 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.90 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	7.25 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.90 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.45 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17308098	Not Available	1631	Open in IMG/M
2140918013\|NODE_529129_length_1056_cov_4.882576	Not Available	1088	Open in IMG/M
3300000955\|JGI1027J12803_103774748	Not Available	504	Open in IMG/M
3300000955\|JGI1027J12803_107602890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1134	Open in IMG/M
3300001593\|JGI12635J15846_10750898	Not Available	560	Open in IMG/M
3300001979\|JGI24740J21852_10081721	Not Available	846	Open in IMG/M
3300001991\|JGI24743J22301_10013546	Not Available	1494	Open in IMG/M
3300004114\|Ga0062593_102939165	Not Available	545	Open in IMG/M
3300004463\|Ga0063356_102061941	Not Available	865	Open in IMG/M
3300004479\|Ga0062595_100776347	Not Available	785	Open in IMG/M
3300004798\|Ga0058859_10076895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	866	Open in IMG/M
3300005327\|Ga0070658_10649882	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	915	Open in IMG/M
3300005328\|Ga0070676_10057869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2295	Open in IMG/M
3300005331\|Ga0070670_100036427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4234	Open in IMG/M
3300005332\|Ga0066388_100424822	All Organisms → Viruses → Predicted Viral	1972	Open in IMG/M
3300005332\|Ga0066388_101363809	Not Available	1228	Open in IMG/M
3300005332\|Ga0066388_105262097	Not Available	656	Open in IMG/M
3300005332\|Ga0066388_105730457	Not Available	628	Open in IMG/M
3300005335\|Ga0070666_10046098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2924	Open in IMG/M
3300005434\|Ga0070709_10001811	All Organisms → cellular organisms → Bacteria	11582	Open in IMG/M
3300005455\|Ga0070663_100115295	All Organisms → cellular organisms → Bacteria → Proteobacteria	2023	Open in IMG/M
3300005457\|Ga0070662_100349905	Not Available	1210	Open in IMG/M
3300005471\|Ga0070698_101153430	Not Available	724	Open in IMG/M
3300005536\|Ga0070697_101343704	Not Available	638	Open in IMG/M
3300005543\|Ga0070672_100004144	All Organisms → cellular organisms → Bacteria → Proteobacteria	9464	Open in IMG/M
3300005543\|Ga0070672_100434914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1128	Open in IMG/M
3300005617\|Ga0068859_100316090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1655	Open in IMG/M
3300005713\|Ga0066905_101240746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	668	Open in IMG/M
3300005764\|Ga0066903_100590227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1921	Open in IMG/M
3300005764\|Ga0066903_102231280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1056	Open in IMG/M
3300006058\|Ga0075432_10067657	All Organisms → cellular organisms → Bacteria → Proteobacteria	1280	Open in IMG/M
3300006058\|Ga0075432_10191703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	805	Open in IMG/M
3300006163\|Ga0070715_10439956	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300006175\|Ga0070712_101656410	Not Available	560	Open in IMG/M
3300006175\|Ga0070712_101916827	Not Available	519	Open in IMG/M
3300006196\|Ga0075422_10451296	Not Available	577	Open in IMG/M
3300006755\|Ga0079222_10198679	Not Available	1203	Open in IMG/M
3300006804\|Ga0079221_10412738	Not Available	842	Open in IMG/M
3300006844\|Ga0075428_101995375	Not Available	601	Open in IMG/M
3300006845\|Ga0075421_101582563	Not Available	713	Open in IMG/M
3300006847\|Ga0075431_100618686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1065	Open in IMG/M
3300006847\|Ga0075431_101415752	Not Available	654	Open in IMG/M
3300006847\|Ga0075431_101691527	Not Available	590	Open in IMG/M
3300006852\|Ga0075433_10733220	Not Available	865	Open in IMG/M
3300006854\|Ga0075425_101103504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	903	Open in IMG/M
3300006871\|Ga0075434_100234123	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300006880\|Ga0075429_101191768	Not Available	665	Open in IMG/M
3300006903\|Ga0075426_10487973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300006904\|Ga0075424_102192592	Not Available	581	Open in IMG/M
3300006914\|Ga0075436_100564067	Not Available	837	Open in IMG/M
3300006914\|Ga0075436_101274027	Not Available	556	Open in IMG/M
3300006954\|Ga0079219_10034784	All Organisms → cellular organisms → Bacteria → Proteobacteria	2030	Open in IMG/M
3300009098\|Ga0105245_10059992	All Organisms → cellular organisms → Bacteria → Proteobacteria	3426	Open in IMG/M
3300009100\|Ga0075418_10923925	Not Available	944	Open in IMG/M
3300009100\|Ga0075418_11645152	Not Available	698	Open in IMG/M
3300009101\|Ga0105247_10853435	Not Available	699	Open in IMG/M
3300009147\|Ga0114129_12085441	Not Available	684	Open in IMG/M
3300009147\|Ga0114129_12400178	Not Available	632	Open in IMG/M
3300009147\|Ga0114129_13032824	Not Available	551	Open in IMG/M
3300009156\|Ga0111538_10249348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2248	Open in IMG/M
3300009162\|Ga0075423_11461816	Not Available	733	Open in IMG/M
3300009174\|Ga0105241_10125053	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300009176\|Ga0105242_10154760	Not Available	2002	Open in IMG/M
3300009177\|Ga0105248_12052315	Not Available	650	Open in IMG/M
3300009551\|Ga0105238_10371460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1420	Open in IMG/M
3300009553\|Ga0105249_13020748	Not Available	540	Open in IMG/M
3300010373\|Ga0134128_10292085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1827	Open in IMG/M
3300010373\|Ga0134128_12399832	Not Available	581	Open in IMG/M
3300010373\|Ga0134128_13202598	Not Available	503	Open in IMG/M
3300010376\|Ga0126381_105119862	Not Available	502	Open in IMG/M
3300010399\|Ga0134127_13658119	Not Available	505	Open in IMG/M
3300012582\|Ga0137358_10566222	Not Available	763	Open in IMG/M
3300012891\|Ga0157305_10248311	Not Available	534	Open in IMG/M
3300012899\|Ga0157299_10145090	Not Available	665	Open in IMG/M
3300012901\|Ga0157288_10080232	Not Available	841	Open in IMG/M
3300012908\|Ga0157286_10473620	Not Available	502	Open in IMG/M
3300012915\|Ga0157302_10034727	All Organisms → cellular organisms → Bacteria → Proteobacteria	1351	Open in IMG/M
3300012930\|Ga0137407_11064591	Not Available	766	Open in IMG/M
3300012951\|Ga0164300_10055757	All Organisms → cellular organisms → Bacteria → Proteobacteria	1581	Open in IMG/M
3300012961\|Ga0164302_10504928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	854	Open in IMG/M
3300012988\|Ga0164306_11713838	Not Available	545	Open in IMG/M
3300012989\|Ga0164305_10121328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1722	Open in IMG/M
3300013096\|Ga0157307_1013413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1290	Open in IMG/M
3300013102\|Ga0157371_10410188	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300013296\|Ga0157374_10809854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	953	Open in IMG/M
3300013306\|Ga0163162_10041830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4585	Open in IMG/M
3300013306\|Ga0163162_10235318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1962	Open in IMG/M
3300014969\|Ga0157376_10539177	Not Available	1153	Open in IMG/M
3300015077\|Ga0173483_10136010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1068	Open in IMG/M
3300015371\|Ga0132258_11333882	Not Available	1813	Open in IMG/M
3300015371\|Ga0132258_11950483	Not Available	1478	Open in IMG/M
3300015373\|Ga0132257_104635692	Not Available	500	Open in IMG/M
3300015374\|Ga0132255_100862546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1352	Open in IMG/M
3300015374\|Ga0132255_101770685	Not Available	938	Open in IMG/M
3300018429\|Ga0190272_10372605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1150	Open in IMG/M
3300019356\|Ga0173481_10007174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3034	Open in IMG/M
3300019362\|Ga0173479_10016226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2037	Open in IMG/M
3300020069\|Ga0197907_10368033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1040	Open in IMG/M
3300020070\|Ga0206356_11257362	Not Available	508	Open in IMG/M
3300020078\|Ga0206352_11108021	All Organisms → cellular organisms → Bacteria → Proteobacteria	1208	Open in IMG/M
3300020080\|Ga0206350_10498337	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300020081\|Ga0206354_11328049	Not Available	772	Open in IMG/M
3300021560\|Ga0126371_11938345	Not Available	708	Open in IMG/M
3300022467\|Ga0224712_10088659	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300022886\|Ga0247746_1051769	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	947	Open in IMG/M
3300023057\|Ga0247797_1055978	Not Available	573	Open in IMG/M
3300023066\|Ga0247793_1019320	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	979	Open in IMG/M
3300023073\|Ga0247744_1081342	Not Available	563	Open in IMG/M
3300023077\|Ga0247802_1019994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	937	Open in IMG/M
3300023263\|Ga0247800_1046060	Not Available	785	Open in IMG/M
3300025911\|Ga0207654_10877279	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300025913\|Ga0207695_10381735	All Organisms → cellular organisms → Bacteria → Proteobacteria	1295	Open in IMG/M
3300025918\|Ga0207662_10074793	All Organisms → cellular organisms → Bacteria → Proteobacteria	2057	Open in IMG/M
3300025920\|Ga0207649_10713400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	778	Open in IMG/M
3300025923\|Ga0207681_11842529	Not Available	504	Open in IMG/M
3300025925\|Ga0207650_10170522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1729	Open in IMG/M
3300025936\|Ga0207670_10142558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1768	Open in IMG/M
3300025940\|Ga0207691_10120602	All Organisms → cellular organisms → Bacteria	2325	Open in IMG/M
3300025960\|Ga0207651_10526159	Not Available	1025	Open in IMG/M
3300025961\|Ga0207712_10452847	Not Available	1089	Open in IMG/M
3300025972\|Ga0207668_11344615	Not Available	643	Open in IMG/M
3300026023\|Ga0207677_10244320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1454	Open in IMG/M
3300026075\|Ga0207708_12030889	Not Available	503	Open in IMG/M
3300026078\|Ga0207702_10624763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1058	Open in IMG/M
3300026118\|Ga0207675_100050898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3866	Open in IMG/M
3300026814\|Ga0207586_104776	Not Available	533	Open in IMG/M
3300027775\|Ga0209177_10029153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1435	Open in IMG/M
3300027775\|Ga0209177_10068800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1052	Open in IMG/M
3300027907\|Ga0207428_10071074	All Organisms → cellular organisms → Bacteria → Proteobacteria	2734	Open in IMG/M
3300027907\|Ga0207428_10362886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1065	Open in IMG/M
3300027907\|Ga0207428_10972039	Not Available	598	Open in IMG/M
3300031547\|Ga0310887_11066449	Not Available	517	Open in IMG/M
3300031716\|Ga0310813_10261571	Not Available	1445	Open in IMG/M
3300031716\|Ga0310813_10805320	Not Available	846	Open in IMG/M
3300031740\|Ga0307468_100758486	Not Available	821	Open in IMG/M
3300031892\|Ga0310893_10063642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1264	Open in IMG/M
3300034819\|Ga0373958_0022748	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.72%
Environmental	Environmental	49.28%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.00%
Terrestrial	Environmental → Terrestrial	49.28%
Human	Host-Associated → Human	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.14%
Digestive System	Host-Associated → Human → Digestive System	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.26%
Loam	Environmental → Terrestrial → Soil → Loam	12.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.62%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.72%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.72%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026814	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-10 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01058550	2088090014	Soil	MPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVAIAEAA
Iowa-Corn-GraphCirc_00184490	2140918013	Soil	MKKAERRELLSAALTHLEAVANLLKEAEEEVLANEARELIDKVDVVALAEAA
JGI1027J12803_1037747482	3300000955	Soil	IAMPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADAARELTDKVDVVALAEAA*
JGI1027J12803_1076028901	3300000955	Soil	THLEAAAKLLEEADEEVLADEARELTDKVDVVALAEAA*
JGI12635J15846_107508981	3300001593	Forest Soil	MTKGEKKMELLSAALTHLEAVAKLLREAEEEVLADEVGELADKVDIVAISRAA*
JGI24740J21852_100817211	3300001979	Corn Rhizosphere	HLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
JGI24743J22301_100135463	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDXVDVVALAEAA*
Ga0062593_1029391651	3300004114	Soil	MTRAERTALLSAALTHLDAAAKLLEEAEEEVLAEEAQELTDKVNVVALAEVA*
Ga0063356_1020619412	3300004463	Arabidopsis Thaliana Rhizosphere	MTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0062595_1007763472	3300004479	Soil	MTRAERTALLSAALTHLDAAAKLLEEAEEEVLAEEARELTDKVNVVALAEAA*
Ga0058859_100768951	3300004798	Host-Associated	SAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0070658_106498822	3300005327	Corn Rhizosphere	MTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVAIAEAA*
Ga0070676_100578693	3300005328	Miscanthus Rhizosphere	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0070670_1000364274	3300005331	Switchgrass Rhizosphere	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADKARELTDKVDVVALAEAA*
Ga0066388_1004248222	3300005332	Tropical Forest Soil	MTKAERKELLTAALTHLDAAANLLEEAEEEVLAEEARELTDKVDVVALAEAA*
Ga0066388_1013638092	3300005332	Tropical Forest Soil	MTRAERRELLTAGLTHLDAAANLLEKAEEGVLAEEARELDDKVDVVALAEPA*
Ga0066388_1052620971	3300005332	Tropical Forest Soil	MTRAERRELLTTALTHLDAAANLLQEAEEEVLAEEARELNDKVDVVALAEPASPHAV*
Ga0066388_1057304572	3300005332	Tropical Forest Soil	ELLTAALTHLDAAANLLEEAEEGVLAEEARELNDKVDVVTLAEPADPQAV*
Ga0070666_100460986	3300005335	Switchgrass Rhizosphere	MPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0070709_1000181116	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0070663_1001152953	3300005455	Corn Rhizosphere	MPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVAIAEAA*
Ga0070662_1003499052	3300005457	Corn Rhizosphere	LSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0070698_1011534301	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDV
Ga0070697_1013437042	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDV
Ga0070672_10000414413	3300005543	Miscanthus Rhizosphere	ELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0070672_1004349141	3300005543	Miscanthus Rhizosphere	THLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0068859_1003160905	3300005617	Switchgrass Rhizosphere	LLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0066905_1012407462	3300005713	Tropical Forest Soil	LNQEVSMRKAERRELLSAVLTHLEAAANLLKEAEEEVLADETRALTDKVDVVALAEAA*
Ga0066903_1005902272	3300005764	Tropical Forest Soil	MTRAERRELLTAVLTHLDAAANLLEKAEEGVLAEEARELNDKVDVVALAEPA*
Ga0066903_1022312802	3300005764	Tropical Forest Soil	MTKAERRELLTAALTHLDAAANLLEEAEEGVLAEEARELNDKVDVVTLAEPADPQAV*
Ga0075432_100676573	3300006058	Populus Rhizosphere	AALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0075432_101917033	3300006058	Populus Rhizosphere	LSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0070715_104399561	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	AMTRAERRDLLTAALTHLDAAANLLEEAEEGVLAEEARELNDKVDVVALVEPASLHAV*
Ga0070712_1016564102	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTRAERRDLLTAALTHLDAAANLLEEAEEGVLAEEARELNDKVDVVALVEPASLHAV*
Ga0070712_1019168271	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTKAEQRRELLSAALTHLDAAAKLLEEAEEGVLADEAQELTDKVDVVALAEAA*
Ga0075422_104512962	3300006196	Populus Rhizosphere	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADQARELTDKVDVVALAEAA*
Ga0079222_101986793	3300006755	Agricultural Soil	MTRAERTALLSAALTHLDAAAKLLEEAEEEVLAEEAQELTDKVNVVALA
Ga0079221_104127382	3300006804	Agricultural Soil	MTRAERTALLSAALTHLDAAAKLLEEAEEEVLAEEAQELTDKVNVV
Ga0075428_1019953751	3300006844	Populus Rhizosphere	AMPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0075421_1015825631	3300006845	Populus Rhizosphere	VLKPRGIAMPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0075431_1006186863	3300006847	Populus Rhizosphere	AMPRAERRELLSAALTHLEAAAKLLEEADEEVLADEARELTDKVDVVALAEAA*
Ga0075431_1014157523	3300006847	Populus Rhizosphere	RRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0075431_1016915271	3300006847	Populus Rhizosphere	MPRAERRELLSAALTHLEAAAKLLEEAGEEVLADEARELTDKVDVVALAEAA*
Ga0075433_107332203	3300006852	Populus Rhizosphere	LSAALAHLEAAAKLLEETEEEVLADEARELTDKVDVVALAEAA*
Ga0075425_1011035041	3300006854	Populus Rhizosphere	MTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEA
Ga0075434_1002341231	3300006871	Populus Rhizosphere	KPRGIAMPRAERRELLSAALTHLEAAAKLLEEAGEEVLADEARELTDKVDVVALAEAA*
Ga0075429_1011917682	3300006880	Populus Rhizosphere	MPRAGRRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVD
Ga0075426_104879733	3300006903	Populus Rhizosphere	PRGIAMPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0075424_1021925921	3300006904	Populus Rhizosphere	MPRAGRRELLSAALTHLEAAAKLLEEADEEVLADEARELTDKVDVVALAEAA*
Ga0075436_1005640672	3300006914	Populus Rhizosphere	MTRAGRRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDAVALAEAA*
Ga0075436_1012740272	3300006914	Populus Rhizosphere	MTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAE
Ga0079219_100347843	3300006954	Agricultural Soil	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAVAA*
Ga0105245_100599921	3300009098	Miscanthus Rhizosphere	LEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0075418_109239251	3300009100	Populus Rhizosphere	MTRAERTALLSAALTHLDAAAKLLEEAEEEVLAEEAQELTDKVNVVALAEAA*
Ga0075418_116451521	3300009100	Populus Rhizosphere	LSAALTHLEAVAKLLEEAEEEVLADEARKLTDKVDVVALAEAA*
Ga0105247_108534352	3300009101	Switchgrass Rhizosphere	MPRAERRELLSAALTQLEAVAKLLEEAEEEVLADEARELTDKVDVVAIAEAA*
Ga0114129_120854411	3300009147	Populus Rhizosphere	LTHLEAAAKLLEEAGEEVLADEARELTDKVHVVALAEAA*
Ga0114129_124001781	3300009147	Populus Rhizosphere	LTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0114129_130328241	3300009147	Populus Rhizosphere	MPRAERRELLSAALTHLEAAAKLLEEADEEVLADEARELTDKVDVVALAEAA*
Ga0111538_102493481	3300009156	Populus Rhizosphere	LTHLEAAAKLLEEAEEEVLADEARELTDKVDAVALAEAA*
Ga0075423_114618161	3300009162	Populus Rhizosphere	MTRAERRDLLSAALAHLEAAAKLLEETEEEVLADEARELTDKVDVVALAEAA*
Ga0105241_101250531	3300009174	Corn Rhizosphere	RAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0105242_101547602	3300009176	Miscanthus Rhizosphere	MTRAGRRELLTAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0105248_120523151	3300009177	Switchgrass Rhizosphere	MTRAERTALLSAALTHLDAAAKLLEEAEEEVLAEEAQELTDKVHVAALAEAA*
Ga0105238_103714602	3300009551	Corn Rhizosphere	MPRAERRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0105249_130207481	3300009553	Switchgrass Rhizosphere	LGAALTHLEAAAKLLEEAEEKVLADEARELTDKVDVVALAEAA*
Ga0134128_102920851	3300010373	Terrestrial Soil	VLKPRGIATTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0134128_123998322	3300010373	Terrestrial Soil	PRVLKPRGIAMPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0134128_132025981	3300010373	Terrestrial Soil	LTHLDAAAKLLEEAEEEVLAEEAQELTDKVNVVALAEVA*
Ga0126381_1051198622	3300010376	Tropical Forest Soil	MTKAERKELLTAALTHLDAAANLLEEAEEGVLAEEARELNDKVDVVALVEPA*
Ga0134127_136581192	3300010399	Terrestrial Soil	KPRGIAMPRAGRRELLSAALTHLEAAAKLLEEAEEEILADEARELTDKVDVVALAEAA*
Ga0137358_105662222	3300012582	Vadose Zone Soil	MTRVERRALLSAALTHLEAAAKLLEEAEEKVLADEARELTDKVDVVALAEAA*
Ga0157305_102483111	3300012891	Soil	PGRSELLSAALTHLEAAAKLLEEADEEVLADEARELTDKVDVVALAEAA*
Ga0157299_101450903	3300012899	Soil	AGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0157288_100802322	3300012901	Soil	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVAIAEAA*
Ga0157286_104736202	3300012908	Soil	AAAKLLEEAEEEVLADEARELTDKVDVVALAQAA*
Ga0157302_100347273	3300012915	Soil	VLPSRTEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0137407_110645911	3300012930	Vadose Zone Soil	QRELLSAALTHWDAAAKLLEEAEEQVLADEARELTDKVDVVALAEAA*
Ga0164300_100557573	3300012951	Soil	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKMDVVALAEAA*
Ga0164302_105049282	3300012961	Soil	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVAIAEVA*
Ga0164306_117138381	3300012988	Soil	MPRAGRRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVAIAEAA*
Ga0164305_101213282	3300012989	Soil	MPRAGRRELLSAAITHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0157307_10134131	3300013096	Soil	MPRAGRRELLSAALTHLEAAAKLLEEADEEVLADEARELTDKVDVVAIAEAA*
Ga0157371_104101881	3300013102	Corn Rhizosphere	MTRAGRRELLSAALAHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA*
Ga0157374_108098541	3300013296	Miscanthus Rhizosphere	VLKPRGIAMPRAGRRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVAIAEAA
Ga0163162_100418304	3300013306	Switchgrass Rhizosphere	VLEPRGIAMPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVAIAEAA
Ga0163162_102353184	3300013306	Switchgrass Rhizosphere	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVHVVALAEAA*
Ga0157376_105391772	3300014969	Miscanthus Rhizosphere	MPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVAIA
Ga0173483_101360103	3300015077	Soil	LLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVAIAEAA*
Ga0132258_113338823	3300015371	Arabidopsis Rhizosphere	MTRAGRRELLSAALTHLEAAAKLLEEAEEEVLAEEAQELTDKVNVVALAEVA*
Ga0132258_119504833	3300015371	Arabidopsis Rhizosphere	SVLEPRGIAMPRAERRELLSAALTHLEAAAKLLEEADEEVLADEARELTDKVDVVALAEAA*
Ga0132257_1046356922	3300015373	Arabidopsis Rhizosphere	MTRAERRELLTAALMHLDVAANLLEEAEEGVLAEEARELNDKVDVVALVEPA*
Ga0132255_1008625462	3300015374	Arabidopsis Rhizosphere	MPRAERRELLSAALTHLEAAAKLLEEAEEELLADKARELTDKVDVVALEEAA*
Ga0132255_1017706852	3300015374	Arabidopsis Rhizosphere	LEAAAKLLEEAEEEVLAEEAQELTDKVNVVALAEVA*
Ga0190272_103726052	3300018429	Soil	LEAVAKLLQEADEEVLADEAGELAHKVDVVAIAKAA
Ga0173481_100071745	3300019356	Soil	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0173479_100162263	3300019362	Soil	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARERTDKVDVVALAEAA
Ga0197907_103680333	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	GPRVLKPRGIAMTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0206356_112573622	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	LKPRGIAMTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0206352_111080213	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0206350_104983373	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	VLEPRGIAMPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0206354_113280493	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	PRVLKPRGIAMPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0126371_119383451	3300021560	Tropical Forest Soil	MTRAERRELLTTALTHLDAAANLLQEAEEEVLAEEARELNDKVDVVALAEPASPHAV
Ga0224712_100886594	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	PRVLKPRGIAMTRAGRRELLSAALAHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0247746_10517692	3300022886	Soil	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVAIAEAA
Ga0247797_10559781	3300023057	Soil	LSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0247793_10193202	3300023066	Soil	MPRAGPRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0247744_10813421	3300023073	Soil	THLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0247802_10199942	3300023077	Soil	MPRAERRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0247800_10460601	3300023263	Soil	MPRAERRELLSAALTHLEAVAKLLEEGEEEVLADEARELTDKVDVVAIAEAA
Ga0207654_108772791	3300025911	Corn Rhizosphere	RAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207695_103817351	3300025913	Corn Rhizosphere	KPRGIAMPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207662_100747934	3300025918	Switchgrass Rhizosphere	RGIAMPRAERRELLSAALTHLEAAAKLLEEADEEVLADEARELTDKVDVVALAEAA
Ga0207649_107134001	3300025920	Corn Rhizosphere	AMTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207681_118425291	3300025923	Switchgrass Rhizosphere	AGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207650_101705221	3300025925	Switchgrass Rhizosphere	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEA
Ga0207650_101753203	3300025925	Switchgrass Rhizosphere	MTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKWTLWP
Ga0207670_101425583	3300025936	Switchgrass Rhizosphere	MTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVV
Ga0207691_101206021	3300025940	Miscanthus Rhizosphere	LLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207651_105261591	3300025960	Switchgrass Rhizosphere	SAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207712_104528473	3300025961	Switchgrass Rhizosphere	MPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVV
Ga0207668_113446151	3300025972	Switchgrass Rhizosphere	LTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207677_102443203	3300026023	Miscanthus Rhizosphere	RELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207708_120308891	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVD
Ga0207702_106247633	3300026078	Corn Rhizosphere	GIAMPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207675_1000508985	3300026118	Switchgrass Rhizosphere	MTRAGRRELLTAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207586_1047762	3300026814	Soil	MPRAERRELLSAALTHLEAVAKLLKEAEEEVLADEARELTDKVDVVALAEAA
Ga0209177_100291533	3300027775	Agricultural Soil	MTRAERTALLSAALTHLDAAAKLLEEAEEEVLAEEAQELTDKVNVVALAEAA
Ga0209177_100688002	3300027775	Agricultural Soil	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAVAA
Ga0207428_100710746	3300027907	Populus Rhizosphere	RRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0207428_103628861	3300027907	Populus Rhizosphere	MPRAGRRELLSAALTHLEAAAKLLEEAEEEILADEARELTDKVDVVALAEAA
Ga0207428_109720392	3300027907	Populus Rhizosphere	IAMPRAERRELLSAALTHLEAVAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0310887_110664491	3300031547	Soil	ALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0310813_102615711	3300031716	Soil	MTRVERRELLSAALTHLEAAAKLLEEAEEQVLADEARELTDKVDVVALAEAA
Ga0310813_108053201	3300031716	Soil	MPRAERRELLSAALTHLEAAAKLLEEADEEVLADEARELTDKVDVVAIAEAA
Ga0307468_1007584861	3300031740	Hardwood Forest Soil	MPRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVGAIAEAA
Ga0310893_100636423	3300031892	Soil	ERGPRVLKPRGIAMTRAGRRELLSAALTHLEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA
Ga0373958_0022748_232_342	3300034819	Rhizosphere Soil	LEAAAKLLEEAEEEVLADEARELTDKVDVVALAEAA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056105

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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