Metagenome / Metatranscriptome Family F056086

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056086
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	52 residues
Representative Sequence	VEDPDTFNAPLTMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPEAKAPDF
Number of Associated Samples	109
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.48 %
% of genes near scaffold ends (potentially truncated)	92.75 %
% of genes from short scaffolds (< 2000 bps)	92.75 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.232 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.913 % of family members)
Environment Ontology (ENVO)	Unclassified (31.884 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.899 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF11003	DUF2842	1.45
PF06146	PsiE	1.45
PF01135	PCMT	0.72
PF06463	Mob_synth_C	0.72
PF00239	Resolvase	0.72
PF01381	HTH_3	0.72
PF00990	GGDEF	0.72
PF01799	Fer2_2	0.72
PF00753	Lactamase_B	0.72
PF01839	FG-GAP	0.72
PF01977	UbiD	0.72
PF07690	MFS_1	0.72
PF01244	Peptidase_M19	0.72
PF13442	Cytochrome_CBB3	0.72
PF00884	Sulfatase	0.72
PF03928	HbpS-like	0.72
PF01527	HTH_Tnp_1	0.72
PF12867	DinB_2	0.72
PF01380	SIS	0.72
PF05721	PhyH	0.72
PF03401	TctC	0.72
PF01152	Bac_globin	0.72
PF00582	Usp	0.72
PF01177	Asp_Glu_race	0.72
PF00583	Acetyltransf_1	0.72
PF00571	CBS	0.72
PF05977	MFS_3	0.72
PF01042	Ribonuc_L-PSP	0.72
PF00877	NLPC_P60	0.72
PF00486	Trans_reg_C	0.72
PF02311	AraC_binding	0.72
PF01609	DDE_Tnp_1	0.72
PF01346	FKBP_N	0.72
PF01909	NTP_transf_2	0.72
PF00378	ECH_1	0.72
PF00005	ABC_tran	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG3223	Phosphate starvation-inducible membrane PsiE (function unknown)	General function prediction only [R]	1.45
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.72
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.72
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.72
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.72
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.72
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.72
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.72
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.72
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	0.72
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.72
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.72
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.72
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.72
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.72
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.72
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG0545	FKBP-type peptidyl-prolyl cis-trans isomerase	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.23 %
Unclassified	root	N/A	13.04 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.12 %
Unclassified	root	N/A	13.04 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.72 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.77 %
Unclassified	root	N/A	13.04 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.72 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.30 %
Unclassified	root	N/A	13.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.17 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.17 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.72 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.72 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.30 %
Unclassified	root	N/A	13.04 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.45 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.72 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.72 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.72 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.30 %
Unclassified	root	N/A	13.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.45 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.72 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.72 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.72 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.72 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.72 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.30 %
Unclassified	root	N/A	13.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.45 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.72 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.72 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.72 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.72 %
Caulobacter vibrioides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → Caulobacter vibrioides	0.72 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.72 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.72 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.30 %
Unclassified	root	N/A	13.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.45 %
Bradyrhizobium sp. LTSPM299	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	0.72 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.72 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	0.72 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.72 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.72 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.72 %
Caulobacter vibrioides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → Caulobacter vibrioides	0.72 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.72 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101377636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300004268\|Ga0066398_10039255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300004635\|Ga0062388_100742792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300005332\|Ga0066388_100414747	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300005332\|Ga0066388_104098980	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005332\|Ga0066388_106494637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300005356\|Ga0070674_100951641	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005364\|Ga0070673_101978540	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005437\|Ga0070710_10631521	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005591\|Ga0070761_10578241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300005764\|Ga0066903_102648223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300005921\|Ga0070766_10538877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300005921\|Ga0070766_10771507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300006163\|Ga0070715_10959735	Not Available	530	Open in IMG/M
3300006172\|Ga0075018_10533900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300006172\|Ga0075018_10733980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300006176\|Ga0070765_100025271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4520	Open in IMG/M
3300006354\|Ga0075021_11021788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300006604\|Ga0074060_11491955	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	612	Open in IMG/M
3300006800\|Ga0066660_11173624	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300006953\|Ga0074063_12338653	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300006953\|Ga0074063_12921655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	712	Open in IMG/M
3300007258\|Ga0099793_10263419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300009143\|Ga0099792_10513099	Not Available	752	Open in IMG/M
3300009143\|Ga0099792_10807259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300009521\|Ga0116222_1293913	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300009839\|Ga0116223_10242309	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300010048\|Ga0126373_11322764	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300010048\|Ga0126373_11769219	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300010147\|Ga0126319_1047526	Not Available	881	Open in IMG/M
3300010147\|Ga0126319_1116455	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300010358\|Ga0126370_10836709	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300010358\|Ga0126370_11030754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300010359\|Ga0126376_11399765	Not Available	724	Open in IMG/M
3300010360\|Ga0126372_10151535	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300010360\|Ga0126372_11212007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300010360\|Ga0126372_11439334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300010360\|Ga0126372_12157643	Not Available	606	Open in IMG/M
3300010362\|Ga0126377_12844110	Not Available	558	Open in IMG/M
3300010366\|Ga0126379_12117992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300010373\|Ga0134128_11737402	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300010376\|Ga0126381_100202605	All Organisms → cellular organisms → Bacteria	2654	Open in IMG/M
3300010376\|Ga0126381_103844707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300010398\|Ga0126383_10875737	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300010398\|Ga0126383_13042306	Not Available	548	Open in IMG/M
3300010868\|Ga0124844_1173135	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300011120\|Ga0150983_15465898	Not Available	722	Open in IMG/M
3300011269\|Ga0137392_10392324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1152	Open in IMG/M
3300011439\|Ga0137432_1306250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012189\|Ga0137388_10750270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300012189\|Ga0137388_11106932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	729	Open in IMG/M
3300012189\|Ga0137388_11421773	Not Available	632	Open in IMG/M
3300012202\|Ga0137363_10539654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300012205\|Ga0137362_10919680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300012210\|Ga0137378_10127411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2352	Open in IMG/M
3300012211\|Ga0137377_10399427	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300012285\|Ga0137370_10757661	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012361\|Ga0137360_10122513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2024	Open in IMG/M
3300012362\|Ga0137361_10030863	Not Available	4241	Open in IMG/M
3300012362\|Ga0137361_10659883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300012363\|Ga0137390_11112995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300012683\|Ga0137398_11206606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300012917\|Ga0137395_10388112	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300012917\|Ga0137395_10441366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300012917\|Ga0137395_11284406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012923\|Ga0137359_10882849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300012925\|Ga0137419_10751809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300012925\|Ga0137419_11668891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012927\|Ga0137416_11894453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300012930\|Ga0137407_10950531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	813	Open in IMG/M
3300012930\|Ga0137407_11279345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300012944\|Ga0137410_11171320	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012971\|Ga0126369_11759446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → Caulobacter vibrioides	709	Open in IMG/M
3300012971\|Ga0126369_12952386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300013306\|Ga0163162_13216335	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300013307\|Ga0157372_10771772	All Organisms → cellular organisms → Bacteria → Proteobacteria	1117	Open in IMG/M
3300014269\|Ga0075302_1045145	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	873	Open in IMG/M
3300016270\|Ga0182036_11468152	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300016319\|Ga0182033_12074246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300016371\|Ga0182034_11369742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300016387\|Ga0182040_10178962	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300016404\|Ga0182037_11047301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300017961\|Ga0187778_11040253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300017972\|Ga0187781_10655556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300017975\|Ga0187782_10915798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300018062\|Ga0187784_11307861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300018468\|Ga0066662_12378193	Not Available	557	Open in IMG/M
3300020583\|Ga0210401_11469078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300021086\|Ga0179596_10421876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300021178\|Ga0210408_11525924	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300021377\|Ga0213874_10289464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300021401\|Ga0210393_11129840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	632	Open in IMG/M
3300021560\|Ga0126371_10471174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1403	Open in IMG/M
3300021560\|Ga0126371_11336892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300021861\|Ga0213853_10517500	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300021861\|Ga0213853_10980891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	689	Open in IMG/M
3300022722\|Ga0242657_1131884	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300025916\|Ga0207663_11701933	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300026319\|Ga0209647_1235917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300026557\|Ga0179587_10686221	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300027826\|Ga0209060_10254439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300027903\|Ga0209488_10259370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1302	Open in IMG/M
3300027903\|Ga0209488_10512779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300027903\|Ga0209488_10909623	Not Available	616	Open in IMG/M
3300027908\|Ga0209006_10013736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7337	Open in IMG/M
3300028536\|Ga0137415_11318517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300029636\|Ga0222749_10115319	All Organisms → cellular organisms → Bacteria → Proteobacteria	1277	Open in IMG/M
3300030058\|Ga0302179_10226100	Not Available	826	Open in IMG/M
3300031679\|Ga0318561_10715017	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300031716\|Ga0310813_10550945	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300031716\|Ga0310813_11074060	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031740\|Ga0307468_100206996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	1334	Open in IMG/M
3300031744\|Ga0306918_10574409	All Organisms → cellular organisms → Bacteria → Proteobacteria	884	Open in IMG/M
3300031770\|Ga0318521_10624802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	652	Open in IMG/M
3300031799\|Ga0318565_10594378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300031820\|Ga0307473_10858989	Not Available	652	Open in IMG/M
3300031835\|Ga0318517_10316977	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031879\|Ga0306919_11362609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300031890\|Ga0306925_11552277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300031910\|Ga0306923_11865254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300031910\|Ga0306923_12083479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300031912\|Ga0306921_11264266	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300031912\|Ga0306921_12267522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300031945\|Ga0310913_10159896	Not Available	1561	Open in IMG/M
3300031947\|Ga0310909_11403585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300031954\|Ga0306926_12606932	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300032001\|Ga0306922_11657290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300032059\|Ga0318533_10267352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300032076\|Ga0306924_11922134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300032160\|Ga0311301_10125748	All Organisms → cellular organisms → Bacteria	4798	Open in IMG/M
3300032180\|Ga0307471_103101735	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300032205\|Ga0307472_100336527	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300032261\|Ga0306920_103258454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300033158\|Ga0335077_12097464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300033289\|Ga0310914_10746132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.38%
Host-Associated	Host-Associated	3.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.41%
Aquatic	Environmental → Aquatic	7.97%
Plants	Host-Associated → Plants	3.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.68%
Freshwater	Environmental → Aquatic → Freshwater	5.07%
Sediment	Environmental → Aquatic → Sediment	2.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.17%
Peat	Environmental → Terrestrial → Peat	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.74%
Loam	Environmental → Terrestrial → Soil → Loam	11.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.45%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1013776362	3300002245	Forest Soil	TVEDPGTFNEPLTMKQRWAKTNGSMQETVCAENNQDFFHQNLFPVPTADKPDF*
Ga0066398_100392551	3300004268	Tropical Forest Soil	SALVTVEDPDAFNAPLTMTRRWFKSNGPMLETVCAENNGDFFNQNLFPEPEAKTPDF*
Ga0062388_1007427922	3300004635	Bog Forest Soil	EDPDTFNAPLTMTRRWFKFEGPMAETVCAENNGDFFKQNLFPEPEAKTPDF*
Ga0066388_1004147474	3300005332	Tropical Forest Soil	PLTMTRRWFKFDGRMLETVCAENNGDFFNQNLFPQPEAKTPDF*
Ga0066388_1040989801	3300005332	Tropical Forest Soil	DTFNAPLTMTRRWFKVNAPMQETNCENNGDFFNQNLFPQPEAKTPDF*
Ga0066388_1064946372	3300005332	Tropical Forest Soil	VEDPDTFNAPLTMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPEAKAPDF*
Ga0070674_1009516412	3300005356	Miscanthus Rhizosphere	DPDTFNGPLTMQQRWFKVDAPMGETVCAENNNDATFFHQKLFPMPEAKTPDF*
Ga0070673_1019785401	3300005364	Switchgrass Rhizosphere	DPDTFNAPLTMQQHWFKVDAPMAETVCAENNEDFFHQNLFPMPEAKTPDF*
Ga0070710_106315212	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DPDTFNAPMSMKQRWFKVNNPMSETVCAENNEDFFHQNLFPMPEAKSADF*
Ga0070761_105782411	3300005591	Soil	VEDPGTFNEPLTMKQRWAGTDGSMQETVCAENNQDFFHQNLFPVPTAEKPDF*
Ga0066903_1026482231	3300005764	Tropical Forest Soil	RWFKFNGPMLETVCAENNGDFFNQNLFPEPEAKTPDF*
Ga0070766_105388771	3300005921	Soil	PGGKGMSALVRVEDPDAFNAPLTMTRRWFRFDGAMIETVCAENNGDFFKQNLFPQPEAKTPDF*
Ga0070766_107715071	3300005921	Soil	VRVEDPDAFNAPLTMTRRWFKFEGPMRETICAENNGDFFHQNLFPQPEATTPDF*
Ga0070715_109597352	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	FNAPLTMTRRWFKFERPMLETICAENNGDFFKQNLFPQPEAKTPDF*
Ga0075018_105339002	3300006172	Watersheds	VEDPDTFNAPLTMTRRWFKFEGPMLETVCPENNGDFFKQNLFPQPEAKTPDF*
Ga0075018_107339802	3300006172	Watersheds	PDTFNAPLTMQQRWFKVNNPMEETACAENNDDFFHQNLFPLPEAKTPDF*
Ga0070765_1000252717	3300006176	Soil	KVEDPDTFNAPLAMQQRWVKMNAPMKETVCAENNGDYFHQNLFPVPEAKTSDF*
Ga0075021_110217882	3300006354	Watersheds	PDTFNTPLTMTRRWFKSNGPMLETVCAENNGDFFDQNLFPQPEAKTPDF*
Ga0074060_114919551	3300006604	Soil	NAPLTMTRRWFKFDGPMVETVCAENNRDFLNQNLFPQPEAKTPDF*
Ga0066660_111736241	3300006800	Soil	DTFNAPLSMQQRWFKVNAPMAETVCAENNDDFFHQNLFPLPEAKAADF*
Ga0074063_123386531	3300006953	Soil	DPDTFNAPLTMTRRWFKIDGPMVETVCGENNYDFPGQNLFPMPEAETPDF*
Ga0074063_129216552	3300006953	Soil	TVNDPDTFNEPLILKQRWFKQEGTMLETVCAENNQDYFSQGLFPVPMADKPDF*
Ga0099793_102634191	3300007258	Vadose Zone Soil	VEDPDAFNAPLTMTRRWFKFDGPMLETVCGENNGDFFNQNLFPQPEAKTPDF*
Ga0099792_105130991	3300009143	Vadose Zone Soil	MEDPDEINAPLTMTRRWFKFDGRMLETVCGENNGNFFNQNLFPQPEAKTPNF*
Ga0099792_108072591	3300009143	Vadose Zone Soil	MSALVTVENPDAFNAPLTMTRRWFKFDGPMLETVCGENNGDFFNQNLFPQPEAKTPDL*
Ga0116222_12939131	3300009521	Peatlands Soil	GKNLTAIATVDDPDTFNGTLTMKQRWFKAEGPMRETICAENNKDYFNRGLFAVPEAERPDF*
Ga0116223_102423091	3300009839	Peatlands Soil	TAIVTVDDPDTFNPPLTMLQRWTKVNGSMKETVCAESPDDYFNQNLFRVPEATKPDF*
Ga0126373_113227641	3300010048	Tropical Forest Soil	MRALVRVEDPETFNAPLTMTRRWFKFNGPMLETVCAENNGDFFNQNLFPEPEAKTPDF*
Ga0126373_117692192	3300010048	Tropical Forest Soil	LVRVEDPDAFNAPLTMTRRWFKLDGPMLETVCPENNGDFFNQNLFPQPEAKTSDF*
Ga0126319_10475261	3300010147	Soil	KFDGPMLETVCAENNVDFPNQNLFPQPEATTPDF*
Ga0126319_11164552	3300010147	Soil	AKVEDPDTFNGPLTMQQRWFKVDAPMGETVCAENNNDATFFHQKLFSMPEAKTPDF*
Ga0126370_108367091	3300010358	Tropical Forest Soil	KGMSALVTVEDPDTFNAPLTMTRRWFKADGRMLETVCGENNGDFFNQNLFPQPEAKTPDF
Ga0126370_110307542	3300010358	Tropical Forest Soil	VEDPDTFNAPLTMTRRWFKFDGRMLETVCAENNGDFFNQNLFPQPEAKTPDF*
Ga0126376_113997651	3300010359	Tropical Forest Soil	TMTRRWFKFDGPMLETVCAENNVDFVNQNLFPQPEAKTPDF*
Ga0126372_101515355	3300010360	Tropical Forest Soil	RWFKFDGRMLETVCAENNGDFFNQNLFPQPEAKTPDF*
Ga0126372_112120073	3300010360	Tropical Forest Soil	EPTGKGMSALVRVEDPDTFDAPLTMTRRWFKFDGRMLETVCGENNGDFFNQNLFPQPEAKTPDF*
Ga0126372_114393341	3300010360	Tropical Forest Soil	PDTFNAPLTMARRWFKFDGPLLETVCAENNGDFFNQNLFPQPEAKAPDF*
Ga0126372_121576431	3300010360	Tropical Forest Soil	DTFNAPLTMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPEAKSSDF*
Ga0126377_128441101	3300010362	Tropical Forest Soil	DPDTFNAPLTMTRRWFKFDGPMLETVCSENNIDFPNQNLVPQPEAKTPDF*
Ga0126379_121179921	3300010366	Tropical Forest Soil	DPDTFNAPLTMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPEAKAPDF*
Ga0134128_117374022	3300010373	Terrestrial Soil	ATVEDPDTFNAPLTMQQRWFKVNDPMAETVCAENNDDFFHQNLFPLPEAKTPDF*
Ga0126381_1002026053	3300010376	Tropical Forest Soil	AVVTVEDPDTFNAPLTMTRRWFKFDGAMLETVCAENNADFFKQNLIPQPEAKTPDF*
Ga0126381_1038447072	3300010376	Tropical Forest Soil	MTAIVTVNDPDTFNEALAMKQRWFKVDAPMQETVCAENNGDFFHQNLFPVPTAEKPDF*
Ga0126383_108757371	3300010398	Tropical Forest Soil	IDPSGKGMSALVTVEDPDAFNAPLTMTRRWFKFNGPMLETICAENNGDFFNQNLFPEPEAKTPDF*
Ga0126383_130423062	3300010398	Tropical Forest Soil	MTRRWFKFEGRMLETVCGENNGDVFNQNLFPQPEAKTPDF*
Ga0124844_11731351	3300010868	Tropical Forest Soil	MTAIVTVEDPDTFNEPLTMQQRWFKVDAPMRETVCAENNLDYFNQGLFPVPEADK
Ga0150983_154658982	3300011120	Forest Soil	FKFERPMLETICTENNGDFFKQNLFPQPEAKTPDF*
Ga0137392_103923241	3300011269	Vadose Zone Soil	PDAFNAPLTMTRRWFKFDGPMLETVCGENNGDFFNQNLFLQPEAKMPDF*
Ga0137432_13062502	3300011439	Soil	NDPETFNAPLTMQQRWTKVNEPMKESICAENNFDFFSQNLFPVPMAEKPEF*
Ga0137388_107502701	3300012189	Vadose Zone Soil	EPGGKGMSALVTVEDRDTFNAPLTMTRRWFKFDGPMLETVCSENNIDFPDQNLFPQPEAKTPDF*
Ga0137388_111069321	3300012189	Vadose Zone Soil	TMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPEAKTPDF*
Ga0137388_114217731	3300012189	Vadose Zone Soil	TFNAPLTMTRRWFKFDGPMLETVCAENNLDFFNQGLFPLPEAKKLDF*
Ga0137363_105396542	3300012202	Vadose Zone Soil	MSALVTVEEPDAFNAPLTMTRRWFKFDGPMLETVCGENNGDFFNQNLFRQPEAKTPDF*
Ga0137362_109196802	3300012205	Vadose Zone Soil	TRRWFKFEGPMLETVCAENNGDLFNQNLFPQPETKEPDF*
Ga0137378_101274114	3300012210	Vadose Zone Soil	VERFTIDPDGQHLTAVVTVTDSDTFNAPLTMQQRWFKAGSPLQETICAENNVDFFHQGLFPLPEAVKPDF*
Ga0137377_103994271	3300012211	Vadose Zone Soil	SADAKNLTAIATVDDPDTFTAPLTMQQRWFKVNNPMEETACAENNDDFFHQNLFPLPEAKTPDF*
Ga0137370_107576612	3300012285	Vadose Zone Soil	IARVEDPDTFNAPLTMQQRWFKVNDPMEETACAENNDDFFHQNLFPLPEAKTPDF*
Ga0137360_101225131	3300012361	Vadose Zone Soil	TFNAPLTMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPEAKTPDF*
Ga0137361_100308634	3300012362	Vadose Zone Soil	RRWFKFDGPMLETVCAENNGDFFNQNLFPQPEAKTPDF*
Ga0137361_106598832	3300012362	Vadose Zone Soil	SALVTVEEPDAFNAPLTMTRRWFKFDGPMLETVCGENNGDFFNQNLFRQPEAKTPDF*
Ga0137390_111129951	3300012363	Vadose Zone Soil	DTFNAPLTMQQRWFKVNAPMKETVCAENNLDYFNQGLFPVPEADKPDF*
Ga0137398_112066061	3300012683	Vadose Zone Soil	EDPDTFNAPLTMTRRWFRFDGPMLETVCAENNGDFFNQNLFPQPEAKAPDF*
Ga0137395_103881121	3300012917	Vadose Zone Soil	NANITMQHSWFKVNDPMEQTSCDENNDDFFHQNLFPLPEAKTPDF*
Ga0137395_104413661	3300012917	Vadose Zone Soil	TFNAPLTMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPEAKMPDF*
Ga0137395_112844061	3300012917	Vadose Zone Soil	SPDQKTLTAIARVEDPDTFNAPLTMKQQWFKVDAPMGETVCAENNFDFFHQNLYPMPTAEKPDF*
Ga0137359_108828492	3300012923	Vadose Zone Soil	MSALVTVEEPDAFNAPLTMTRRWFKFDGPMLETVCGENNGDFFNQNLFPQPEAKTPDF*
Ga0137419_107518092	3300012925	Vadose Zone Soil	ATVEDPETFNAPLTMQQRWFKVNLPLAETVCAENNEDFFHQNLYPMPEAKKPDF*
Ga0137419_116688911	3300012925	Vadose Zone Soil	DAFNAPLTMKRRWFKFAGPMVETVCAENNGDFFKQNLFPQPEAKTPDF*
Ga0137416_118944531	3300012927	Vadose Zone Soil	FNAPLTMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPETKEPDF*
Ga0137407_109505311	3300012930	Vadose Zone Soil	GMSALVTVEDPEAFNAPLTMTRRWFKFDGPMLETVCSENNIDFANQNLVPQPEAKTPDF*
Ga0137407_112793451	3300012930	Vadose Zone Soil	EDADTFNAPLTMTRRWFKFDGRMLETVCAENNGDFFNQNLFPQPEAKTPDF*
Ga0137410_111713202	3300012944	Vadose Zone Soil	FTLNADGKGITGIAKVEDPDAFNAPLTMQQRWFKVNLPLAETVCAENNEDFFHQNLYPMPEAKKADF*
Ga0126369_117594462	3300012971	Tropical Forest Soil	TVDDPDTFNAPLTMQQRWFKVNAPMKETICAENNLDYFNQGLFPLPEAEKPDF*
Ga0126369_129523861	3300012971	Tropical Forest Soil	LVTVEDPDAFNAPLTMTRRWFKFNGPMLETICAENNGDFFNQNLFPEPEAKTPDF*
Ga0163162_132163352	3300013306	Switchgrass Rhizosphere	DTFNAPLTMQQHWFKVDAPMAETVCAENNEDFFHQNLFPMPEAKTPDF*
Ga0157372_107717723	3300013307	Corn Rhizosphere	RVEDPETFNAPITLAKRWFKVDLPMLETVCSENNSDFFNQNLFPIPQAAKPDF*
Ga0181538_100467274	3300014162	Bog	PLAMQQRWTKVNARMTESICAENNGDFYHQNLFPLPEAEKPDF*
Ga0075302_10451451	3300014269	Natural And Restored Wetlands	PEAYNAPITMMRRWFKVNDPMLETVCAENNGDHFNQNLYPIPEAEKPDF*
Ga0182036_114681522	3300016270	Soil	RWFKFDGPMLETVCSENNGDFFKQNLFPQPEAKTPDF
Ga0182033_120742462	3300016319	Soil	EDPDAFNAPLTMQQRWVKMNTPFRESVCAENNGDYFHQNLFPLPEAKTPDF
Ga0182034_113697422	3300016371	Soil	TIQPGGKGMSAVVTVEDPDTFNAPLTMTRRWFKFDGPMLETVCSENNGDFFKQNLFPQPEAKTPDF
Ga0182040_101789621	3300016387	Soil	RWFKFDGPMLETVCSENNSDFFKQNLFPQPEAKTPDF
Ga0182037_110473011	3300016404	Soil	KGMSALVTVEDPDAFNAPLTMTRRWFKFDGPMLETVCAENNGDFFKQNLFPQPEAKTPDF
Ga0187778_110402531	3300017961	Tropical Peatland	KVEDPDTFNAPLYMQQRWFRASEPMKETVCAENNGDFFNQNLFPLPHADKPDF
Ga0187781_106555562	3300017972	Tropical Peatland	VEDPDTFNEPLTMKQRWIKTNGSLQETVCAENNHDYFHQNLFPVPTAEKPDF
Ga0187782_109157982	3300017975	Tropical Peatland	GGKGMSALVTVEDPDAFNAPLTMTRRWFRFDGPMLETVCAENNVDVFKQNLFPQPEAKTLDF
Ga0187784_113078612	3300018062	Tropical Peatland	IEDPDTFNAPLYMTRRWFRVDYPIEENVCAENNGDFFNQNLFPIPEAKRSEF
Ga0066662_123781931	3300018468	Grasslands Soil	TDPDTFNAPLTMKQRWFKAEQSMLETICAENNKDYFNQRLFSLPEAKKADF
Ga0210401_114690782	3300020583	Soil	AKVEDPDTFNAPLTMKQRWTKAKGRMIETVCAENNNDYFSQGLFPVPMADKPDF
Ga0179596_104218761	3300021086	Vadose Zone Soil	TMTRRWFKFDGPMLETVCGENNGDFFNQNLFPQPEAKMPDF
Ga0210408_115259241	3300021178	Soil	LSMTRRWFRFDGQMLETVCAENNGDFFNQNLFPQPEAKTPDF
Ga0213874_102894642	3300021377	Plant Roots	KGMGAVVTVEDPDAFNAPLSMTRRWFKANGPMLETVCAENNGDFFSQNLFPEPEAKTPDF
Ga0210393_111298401	3300021401	Soil	TIQPGGKGMTALVTVEDPDTFNAPLTMTRRWFKFEGPMRETICAENNGDFFHQNLFPQPEATTPDF
Ga0210384_100260851	3300021432	Soil	NAPLAMQQRWVKMNAPMKETVCAENNGDYFHQNLFPVPEAKTPDF
Ga0126371_104711743	3300021560	Tropical Forest Soil	GGKGMSALVTVEDPDAFNAPLTMTRRWFKFDGRMLETVCAENNGDFFNQNLFPQPEAKTPDF
Ga0126371_113368921	3300021560	Tropical Forest Soil	SETFNAPLTMTRRWFKLDGPMLETVCAENNGDFFDQNLFPQPEAKTPDF
Ga0213853_105175002	3300021861	Watersheds	VVTVDDPDAYNAPLTMTRRWFKADGPMLETVCTENNVDFFHQNLYPIPQADKPDF
Ga0213853_109808911	3300021861	Watersheds	FNAPLTMTRRWFKFDGPMLETICAENNGDFFNQNLFPQPEAKTPDF
Ga0242657_11318842	3300022722	Soil	DPDTFNGPLTMQQRWFKVNNPMEETACAENNDDFFHQNLFPLPEAKTPDF
Ga0207663_117019331	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TMTRRWFKFEGRMLETVCAENNGDFFNQNLFPQPEAKTPDF
Ga0209647_12359171	3300026319	Grasslands Soil	PDTFNAPLTMQQRWFKVNAPMKETVCAENNQDYFNQGLFPVPEAEKPDF
Ga0179587_106862212	3300026557	Vadose Zone Soil	KNLTAIATVEDSDTFNAPLTMQQRWFKVNNPMEETACAENNDDFFHQNLFPLPEAKTPDF
Ga0209060_102544391	3300027826	Surface Soil	DPDAFNAPLYMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPQAETPDF
Ga0209773_100406221	3300027829	Bog Forest Soil	TIAPGGKGLSALVTVEDPDTFNAPLTMTRRWFKFDGPMQETVCSENNGDFFEQGLVPMPEAAKSDF
Ga0209488_102593703	3300027903	Vadose Zone Soil	TMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPEAKTPDF
Ga0209488_105127791	3300027903	Vadose Zone Soil	TMTRRWFKFDGPMLETVCAENNGDFFNQNLFPQPETKTPDF
Ga0209488_109096231	3300027903	Vadose Zone Soil	MEDPDEINAPLTMTRRWFKFDGRMLETVCGENNGNFFNQNLFPQPEAKTPNF
Ga0209006_100137361	3300027908	Forest Soil	EPGGKFLSAIATIEDADTFNEPLTMKQRWAKTNGSMQETVCAENNQDFFHQNLFPVPTADKPDF
Ga0137415_113185171	3300028536	Vadose Zone Soil	APLTMTRRWFKFDGSMLETVCAENNGDFFNQNLFPQPETKEPDF
Ga0222749_101153191	3300029636	Soil	PLTMARRWFKLAGPMLETVCAENNGDFFNQNLFPQPEAKAPDF
Ga0302179_102261001	3300030058	Palsa	GIATVEDPDTFNEPLTMKQRWFKVNARIEETVCAENNEDFFHQNLFPVPSADKPDF
Ga0318561_107150171	3300031679	Soil	TVEDPDTFNAPLTMKQRWLKTKASMRETICAENNFDYFNQGLFPIPTAEKPDF
Ga0310813_105509451	3300031716	Soil	TFNGPLTKQQRWFRVNEPMGETVCAENNNDAIFFGQKLFPMPEAKPADF
Ga0310813_110740602	3300031716	Soil	TVNDPDTFNAPLTMQQRWFKVDAPMAETVCAENNEDFFHQNLFPMPEAKTPDF
Ga0307468_1002069961	3300031740	Hardwood Forest Soil	TVDDPDTFNAPLTMQQRWFKVDSPMKETICAENNKDYFNQGLFPIPEAERPDF
Ga0306918_105744091	3300031744	Soil	TVNDPDTFNAPLAMKQRWFKVDAPMQETVCAENNGDFFHQNLFPVPTAEKPDF
Ga0318521_106248022	3300031770	Soil	VPSDPDTFNAPLTMTRRWFKFDGAMLETVCAENNGDFFKQNLFPQPEAKTPDF
Ga0318565_105943781	3300031799	Soil	NMTAIVTVNDPDTFNAPLAMKQRWFKVDAPMQETVCAENNGDFFHQNLFPVPTAEKPDF
Ga0307473_108589892	3300031820	Hardwood Forest Soil	NEPLTMTRRWFKIDGAMQETVCAENNIDFPGQNLFPQPEAEKPDF
Ga0318517_103169772	3300031835	Soil	GQHLTGIATVEDPDTFNAPLTMRQRWLKTKGSMRETICAENNFDYFNQGLFPIPTAEKPD
Ga0306919_113626091	3300031879	Soil	TGIVSVEDPDTFNAPLTMKQRWLKTNARIRETICAENNFDYFKQGLFPMPTANKPDF
Ga0306925_115522771	3300031890	Soil	TGIVSVEDPDTFNAPLTMKQRWLKTNARIRETICAENNFDYFNQGLFPMPTANKPDF
Ga0306923_118652541	3300031910	Soil	FNAPLTMTRRWFKSEGPMLETVCAENNGDFFKQNLFPQPEAKTPDF
Ga0306923_120834792	3300031910	Soil	LTALVKFEDPDAFNAPLTMQQRWVKMNTPFRESVCAENNGDYFHQNLFPLPEAKTPDF
Ga0306921_112642661	3300031912	Soil	TAVVKVEDPGTFNEPLYMKQQWFKVNAPMGETVCAENNFDFFHQNLFPMPEAARSDF
Ga0306921_122675222	3300031912	Soil	PETFNAPLTMTRRWFKLNGPMLETVCAENNGDFFDQNLFPQPEAKTPDF
Ga0310913_101598964	3300031945	Soil	AFNAPLTMTRRWFKFDGPMLETVCAENNGDFFKQNLFPQPEAKTPDF
Ga0310909_114035851	3300031947	Soil	AIEPDGKYLTATVTVEDPGTFNEPLTMQQRWFKVDAPMRETVCAENNLDYFNQGLFPVPEADKADF
Ga0306926_126069321	3300031954	Soil	DQKTLTAVVKVEDPGTFNEPLYMKQQWFKVNAPMGETVCAENNFDFFHQNLFPMPEAARSDF
Ga0306922_116572903	3300032001	Soil	MRALVRVEDPETFNAPLTMTRRWFKLNGPMLETVCAENNGDFFDQNLFPQPEAKTPDF
Ga0318533_102673523	3300032059	Soil	TMTRRWFKLNGPMLETVCAENNGDFFDQNLFPQPEAKTPDF
Ga0306924_119221342	3300032076	Soil	FKFDGAMLETVCAENNGDFFKQNLFPQPEAKTPDF
Ga0311301_101257486	3300032160	Peatlands Soil	IATVDDPDTFNGTLTMKQRWFKAEGPMRETICAENNKDYFNQGLFAVPEAERPDF
Ga0307471_1031017352	3300032180	Hardwood Forest Soil	DTFDAPLTMTRRWFKFEGRMLETVCAENNGDFFNQNLFPQPEAKTPDF
Ga0307472_1003365273	3300032205	Hardwood Forest Soil	PDTFDAPLIMTRRWFKFDGRMLETVCAENNGDFFNQNLFPQPEAKTPDF
Ga0306920_1032584541	3300032261	Soil	MTRRWFKLNGPMLETVCAENNGDFFDQNLFPQPEAKTPDF
Ga0335077_120974642	3300033158	Soil	VTVEDPDTFNAPLTMTRRWFKFDGPMLETVCSENNGDFFNQNLFPQPEAKTPDF
Ga0310914_107461322	3300033289	Soil	NSLTALVKVEDPDAFNAPLTMQQRWVKMNTPFRESVCAENNGDYFHQNLFPLPEAKTPDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056086

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences