NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F056054

Metagenome / Metatranscriptome Family F056054

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F056054
Family Type Metagenome / Metatranscriptome
Number of Sequences 138
Average Sequence Length 63 residues
Representative Sequence NSDYFDITMEGAGSTANTFSSSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ
Number of Associated Samples 121
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.16 %
% of genes near scaffold ends (potentially truncated) 97.10 %
% of genes from short scaffolds (< 2000 bps) 86.23 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (55.072 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(32.609 % of family members)
Environment Ontology (ENVO) Unclassified
(77.536 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(76.812 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 23.26%    Coil/Unstructured: 76.74%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF03796DnaB_C 5.80
PF13186SPASM 4.35
PF13394Fer4_14 4.35
PF04055Radical_SAM 2.17
PF13353Fer4_12 2.17
PF08275Toprim_N 0.72
PF06945DUF1289 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 5.80
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 5.80
COG0358DNA primase (bacterial type)Replication, recombination and repair [L] 0.72
COG3313Predicted Fe-S protein YdhL, DUF1289 familyGeneral function prediction only [R] 0.72


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.09 %
UnclassifiedrootN/A23.91 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001460|JGI24003J15210_10026652All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2143Open in IMG/M
3300001472|JGI24004J15324_10112531All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300002231|KVRMV2_101260105All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300002484|JGI25129J35166_1067181All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300005239|Ga0073579_1037663All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300005424|Ga0066826_10072513All Organisms → cellular organisms → Bacteria1282Open in IMG/M
3300005431|Ga0066854_10265097Not Available580Open in IMG/M
3300005658|Ga0066842_10042905All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300005960|Ga0066364_10287705Not Available576Open in IMG/M
3300006025|Ga0075474_10252489Not Available530Open in IMG/M
3300006165|Ga0075443_10292686Not Available597Open in IMG/M
3300006308|Ga0068470_1050996All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2499Open in IMG/M
3300006789|Ga0098054_1044428All Organisms → Viruses → Predicted Viral1714Open in IMG/M
3300006868|Ga0075481_10258543All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300006924|Ga0098051_1031443All Organisms → Viruses → Predicted Viral1503Open in IMG/M
3300007234|Ga0075460_10151613All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300007504|Ga0104999_1135680All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300007540|Ga0099847_1192416Not Available596Open in IMG/M
3300007542|Ga0099846_1308188Not Available541Open in IMG/M
3300008012|Ga0075480_10181283All Organisms → Viruses → Predicted Viral1125Open in IMG/M
3300009071|Ga0115566_10685220Not Available569Open in IMG/M
3300009149|Ga0114918_10415868All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300009172|Ga0114995_10088496All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1741Open in IMG/M
3300009422|Ga0114998_10206417All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300009422|Ga0114998_10642150Not Available501Open in IMG/M
3300009425|Ga0114997_10100607All Organisms → cellular organisms → Bacteria1765Open in IMG/M
3300009449|Ga0115558_1196222All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300009512|Ga0115003_10054684All Organisms → Viruses → Predicted Viral2520Open in IMG/M
3300009512|Ga0115003_10076043All Organisms → Viruses → Predicted Viral2092Open in IMG/M
3300009512|Ga0115003_10283729All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300009526|Ga0115004_10961473Not Available511Open in IMG/M
3300009705|Ga0115000_10089548All Organisms → cellular organisms → Bacteria2075Open in IMG/M
3300009706|Ga0115002_10635815All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300009786|Ga0114999_10230759All Organisms → cellular organisms → Bacteria1520Open in IMG/M
3300009786|Ga0114999_10531833All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300009786|Ga0114999_11156170All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300010297|Ga0129345_1038669All Organisms → cellular organisms → Bacteria1847Open in IMG/M
3300010318|Ga0136656_1232920Not Available610Open in IMG/M
3300010368|Ga0129324_10385414Not Available543Open in IMG/M
3300010883|Ga0133547_11501600Not Available1265Open in IMG/M
3300010883|Ga0133547_11913534All Organisms → cellular organisms → Bacteria1091Open in IMG/M
3300016745|Ga0182093_1750825All Organisms → Viruses → Predicted Viral1449Open in IMG/M
3300016771|Ga0182082_1173895All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300017697|Ga0180120_10159399All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300017710|Ga0181403_1024441All Organisms → Viruses → Predicted Viral1279Open in IMG/M
3300017717|Ga0181404_1085245All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300017730|Ga0181417_1170091Not Available525Open in IMG/M
3300017731|Ga0181416_1010230All Organisms → Viruses → Predicted Viral2231Open in IMG/M
3300017740|Ga0181418_1025903All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1514Open in IMG/M
3300017742|Ga0181399_1036729Not Available1311Open in IMG/M
3300017746|Ga0181389_1053413All Organisms → Viruses → Predicted Viral1174Open in IMG/M
3300017753|Ga0181407_1161200Not Available551Open in IMG/M
3300017755|Ga0181411_1199188Not Available563Open in IMG/M
3300017758|Ga0181409_1118040All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300017764|Ga0181385_1143327All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300017773|Ga0181386_1109980All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300017776|Ga0181394_1113115All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300017781|Ga0181423_1221635All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300017818|Ga0181565_10942729Not Available537Open in IMG/M
3300017951|Ga0181577_10160794All Organisms → Viruses → Predicted Viral1523Open in IMG/M
3300017964|Ga0181589_10042628All Organisms → cellular organisms → Bacteria3431Open in IMG/M
3300017964|Ga0181589_10506589All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300018410|Ga0181561_10522414Not Available531Open in IMG/M
3300018415|Ga0181559_10313936All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300018421|Ga0181592_10323587All Organisms → Viruses → Predicted Viral1109Open in IMG/M
3300020178|Ga0181599_1139415All Organisms → Viruses → Predicted Viral1039Open in IMG/M
3300020189|Ga0181578_10182474All Organisms → Viruses → Predicted Viral1065Open in IMG/M
3300020191|Ga0181604_10071172All Organisms → Viruses → Predicted Viral1948Open in IMG/M
3300020379|Ga0211652_10084287All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300020397|Ga0211583_10046942All Organisms → Viruses → Predicted Viral1700Open in IMG/M
3300020408|Ga0211651_10308865Not Available596Open in IMG/M
3300020428|Ga0211521_10034648All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2727Open in IMG/M
3300020452|Ga0211545_10185083All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300020452|Ga0211545_10408105Not Available617Open in IMG/M
3300020468|Ga0211475_10273994All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300021084|Ga0206678_10375711All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300021084|Ga0206678_10524553Not Available543Open in IMG/M
3300021371|Ga0213863_10181237All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300021442|Ga0206685_10032829All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1669Open in IMG/M
3300021443|Ga0206681_10210054All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300021957|Ga0222717_10031862All Organisms → Viruses → Predicted Viral3484Open in IMG/M
3300021960|Ga0222715_10088923All Organisms → Viruses → Predicted Viral2020Open in IMG/M
3300022225|Ga0187833_10604057All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300022927|Ga0255769_10084153All Organisms → Viruses → Predicted Viral1686Open in IMG/M
3300022935|Ga0255780_10144494All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1310Open in IMG/M
3300023081|Ga0255764_10033117All Organisms → cellular organisms → Bacteria3351Open in IMG/M
3300023081|Ga0255764_10265970All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300023116|Ga0255751_10192922All Organisms → cellular organisms → Bacteria1149Open in IMG/M
(restricted) 3300024255|Ga0233438_10238701All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300024293|Ga0228651_1067274All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300025084|Ga0208298_1027585All Organisms → Viruses → Predicted Viral1209Open in IMG/M
3300025120|Ga0209535_1019892All Organisms → cellular organisms → Bacteria3430Open in IMG/M
3300025120|Ga0209535_1029412All Organisms → Viruses → Predicted Viral2618Open in IMG/M
3300025120|Ga0209535_1169500All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300025137|Ga0209336_10069390All Organisms → cellular organisms → Bacteria1048Open in IMG/M
3300025138|Ga0209634_1203686All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300025168|Ga0209337_1256443Not Available665Open in IMG/M
3300025654|Ga0209196_1068725All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300025687|Ga0208019_1197670Not Available528Open in IMG/M
3300025770|Ga0209362_1034846All Organisms → Viruses → Predicted Viral2256Open in IMG/M
3300025828|Ga0208547_1208943Not Available521Open in IMG/M
3300025880|Ga0209534_10270055All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300026097|Ga0209953_1041728All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300026192|Ga0207986_1036474All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300027522|Ga0209384_1132623Not Available561Open in IMG/M
3300027672|Ga0209383_1157999Not Available697Open in IMG/M
3300027791|Ga0209830_10060092All Organisms → Viruses → Predicted Viral1982Open in IMG/M
3300027813|Ga0209090_10042443All Organisms → Viruses → Predicted Viral2578Open in IMG/M
3300028125|Ga0256368_1072167Not Available592Open in IMG/M
3300028489|Ga0257112_10101327All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300028535|Ga0257111_1074465All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300031142|Ga0308022_1015361All Organisms → Viruses → Predicted Viral2498Open in IMG/M
3300031142|Ga0308022_1101482All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300031142|Ga0308022_1166464Not Available629Open in IMG/M
3300031143|Ga0308025_1069126All Organisms → Viruses → Predicted Viral1332Open in IMG/M
3300031519|Ga0307488_10287517All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300031588|Ga0302137_1017004All Organisms → Viruses → Predicted Viral3231Open in IMG/M
3300031588|Ga0302137_1110296All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300031594|Ga0302131_1200748Not Available652Open in IMG/M
3300031597|Ga0302116_1089977All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300031599|Ga0308007_10013128All Organisms → cellular organisms → Bacteria3278Open in IMG/M
3300031606|Ga0302119_10362465Not Available530Open in IMG/M
3300031621|Ga0302114_10243350All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300031626|Ga0302121_10102676All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300031627|Ga0302118_10387105All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300031627|Ga0302118_10480362Not Available548Open in IMG/M
3300031639|Ga0302117_10186725All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300031644|Ga0308001_10303869All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300031701|Ga0302120_10093983All Organisms → cellular organisms → Bacteria1223Open in IMG/M
3300031766|Ga0315322_10733002All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300031802|Ga0310123_10001174Not Available22277Open in IMG/M
3300031811|Ga0310125_10071000All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1846Open in IMG/M
3300031811|Ga0310125_10196769All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300031861|Ga0315319_10563805All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300031886|Ga0315318_10214126All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1099Open in IMG/M
3300032032|Ga0315327_10631823Not Available659Open in IMG/M
3300032073|Ga0315315_11300834All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300032820|Ga0310342_102430182All Organisms → cellular organisms → Bacteria627Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine32.61%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh12.32%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater10.14%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.25%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater6.52%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.80%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine4.35%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.35%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.90%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine2.17%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.45%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.45%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.45%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.72%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.72%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.72%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.72%
Water ColumnEnvironmental → Aquatic → Marine → Coastal → Unclassified → Water Column0.72%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.72%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.72%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.72%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.72%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.72%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005424Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49EnvironmentalOpen in IMG/M
3300005431Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75EnvironmentalOpen in IMG/M
3300005658Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF86AEnvironmentalOpen in IMG/M
3300005960Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_AEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007504Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300016745Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016771Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020189Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020397Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)EnvironmentalOpen in IMG/M
3300020408Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300020468Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)EnvironmentalOpen in IMG/M
3300021084Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300021443Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022225Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022927Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaGEnvironmentalOpen in IMG/M
3300022935Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaGEnvironmentalOpen in IMG/M
3300023081Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025654Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025770Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300026097Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026192Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300028489Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000mEnvironmentalOpen in IMG/M
3300028535Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500mEnvironmentalOpen in IMG/M
3300031142Marine microbial communities from water near the shore, Antarctic Ocean - #353EnvironmentalOpen in IMG/M
3300031143Marine microbial communities from water near the shore, Antarctic Ocean - #422EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031588Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCMEnvironmentalOpen in IMG/M
3300031594Marine microbial communities from Western Arctic Ocean, Canada - CB9_20mEnvironmentalOpen in IMG/M
3300031597Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCMEnvironmentalOpen in IMG/M
3300031599Marine microbial communities from water near the shore, Antarctic Ocean - #71EnvironmentalOpen in IMG/M
3300031606Marine microbial communities from Western Arctic Ocean, Canada - AG5_TmaxEnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031639Marine microbial communities from Western Arctic Ocean, Canada - AG5_32.2EnvironmentalOpen in IMG/M
3300031644Marine microbial communities from water near the shore, Antarctic Ocean - #5EnvironmentalOpen in IMG/M
3300031701Marine microbial communities from Western Arctic Ocean, Canada - AG5_BottomEnvironmentalOpen in IMG/M
3300031766Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515EnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300031811Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8EnvironmentalOpen in IMG/M
3300031861Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24003J15210_1002665213300001460MarinePSESDYFDITMEGAGSPANSFTDSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ
JGI24004J15324_1011253123300001472MarineTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWENDPGNTGIVDKILYRQ*
KVRMV2_10126010513300002231Marine SedimentFDITMEGASEPANSFSDSTTVTTFNFTGVYQNIRFSWGNSTGNTGVIDKILYRQ*
JGI25129J35166_106718123300002484MarineSSSPASADYFEITLNGQSSPVTFSSSTTVTNYNFYGVFHNVRFSWDNDTGNTGVIDKILYRR*
Ga0073579_103766323300005239MarineVYTKDFTGTVKVQGTMVANPSAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDPGNTGIVDKILYRQ*
Ga0066826_1007251313300005424MarineGALRVQGTMSSSPANADYFNITLDGQSSPVTFSSSTTVTNYNFYGVFHYARFSWDNDSGNTGVIDKILYRR*
Ga0066854_1026509713300005431MarineNFSGALRVRGTMSSSPANADYFNITLDGQSSPVTFSSSTTVTNYNFYGVFHNVRFSWDNDTGNTGVIDKILYRR*
Ga0066842_1004290513300005658MarineTMSSSPANADYFNITLDGESSPVTFSSSTTVTNYNFYGVFHNVRFSWDNDTGNTGVIDKILYRR*
Ga0066364_1028770523300005960MarineTMSTSPTEAKDFFDITMDGAASPTNTFSDSTGVTTFNFTGVYQNVRFTWDNDPDNTGIVDKILYRQ*
Ga0075474_1025248923300006025AqueousMSSTPGSGDWFDITMDGEASATNTFSNSTTVTNYNFTGVFHNIRFTWSNDSSNTGVIDRILYRQ*
Ga0075443_1029268613300006165MarineNPSAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDTGNTGLVDKILYRQ*
Ga0068470_105099613300006308MarineSTPENNDYFNITLEGEASPRIIFSNSTTVTNYNFYGVYTNVRFSWGNDTGNNGIIDKILYRQ*
Ga0098054_104442833300006789MarineMNATPSDSDYFDITMEGAGSTANSFTDSTTVTNFNFTGVYHSVRFSWGNDSDNTGVIDKILYRQ*
Ga0075481_1025854313300006868AqueousDITMDGEAGATNTFTNSTTVTNYNFTGVFHNIRITWGNDTGNTGVIDKVLYRQ*
Ga0098051_103144333300006924MarineSNTDYFDITMEGAGSTANSFSDSTTVSNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ*
Ga0075460_1015161313300007234AqueousSATPSNTDYFDITMEGAGSTANTFSSSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ*
Ga0104999_113568023300007504Water ColumnGALRVQGTMASSPTGADYFDITLDGQSSPVTFSSSTTVTNYNFYGVYTNVRFSWGNDTGNNGIIDKILYRQ*
Ga0099847_119241613300007540AqueousLRVQGTMSASPGSGDWFDITMEGAASTANTFSSSTTVTNYNFYGVYHSVRFSWGNDSGNTGVIDKILYRQ*
Ga0099846_130818813300007542AqueousITMDGEAGATNTFTNSTTVTNYNFTGVFHNIRFTWGNDTGNTGLIDKILYRQ*
Ga0075480_1018128323300008012AqueousSASPSNTDYFDITMEGAGSTANTFSNSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ*
Ga0115566_1068522013300009071Pelagic MarineKDFTGTVKVQGTMVSNPSAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDPGNTGLVDKILYRQ*
Ga0114918_1041586823300009149Deep SubsurfaceWFDITMDGESVPANTFSSSTGVTTYNFYGVYHNVRFTWDNDPDNTGLVDKILYRQ*
Ga0114995_1008849613300009172MarineAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDPGNTGRVDKILYRQ*
Ga0114998_1020641723300009422MarineQGTMSSSPSSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ*
Ga0114998_1064215013300009422MarinePTSASDYFDITMTDAASATNTFTSSTGVTDFNFTGVYQNVRFTWDNDPDNTGLVDKILYRQ*
Ga0114997_1010060713300009425MarineTMVSNPSAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDPGNTGLVDKILYRQ*
Ga0115558_119622213300009449Pelagic MarineMSASPSNTDYFDITMEGAGSTANSFTDSTTVTNFNFTGVYHSVRFSWGNDSDNTGVIDKILYRQ*
Ga0115003_1005468443300009512MarineLKVQGTMSSSPSSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVFQSVRFTWDNDPSNTGLVDKILYRQ*
Ga0115003_1007604313300009512MarineLKVQGTMSSSPSSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ*
Ga0115003_1028372923300009512MarineDFFDITMDGEASSTNTFSSSTGVTNFNFFGVYHSVRFSWDNDPSNTGLVDKILFRQ*
Ga0115004_1096147313300009526MarineQGTMSSSPSSANDYFDITMDGEASATNTFSSSSTITNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ*
Ga0115000_1008954843300009705MarineFTGTLKVQGTMSSSPSSANDYFDITMDGEASATNTFSSSSTITNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ*
Ga0115002_1063581513300009706MarineTGTLKVQGTMSSSPSSANDYFDITMDGEASATNTFSSSSTITNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ*
Ga0114999_1023075913300009786MarineMSSSPSSANDYFDITMDGEASATNTFSSSSTITNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ*
Ga0114999_1053183323300009786MarineFDITVDGEATPTITFSDSSTVTNYNFYGVYSNIRFSWDNDTDNTGTIDKILYRQ*
Ga0114999_1115617013300009786MarineADYFNITLDGESSPVTFSSSSTVTNYNFYGVFHYVRFSWDNDTDNTGVIDKILYRS*
Ga0129345_103866933300010297Freshwater To Marine Saline GradientFSGTLRVQGTMSASPGSSDWFDITMDGAGSTANTFSSSTTVTNYNFYGVYHSVRFSWGTDSGNTGVIDKILYRQ*
Ga0136656_123292013300010318Freshwater To Marine Saline GradientGTMSASPSNTDYFDITMEGAGSTANSFSNSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ*
Ga0129324_1038541423300010368Freshwater To Marine Saline GradientFSGTLRVQGTMSASPGSTDWFDITMDGAGSTANTFSSSTTVTNYNFYGVYHSVRFSWGNDSGNTGVIDKILYRQ*
Ga0133547_1150160013300010883MarineLKVQGTMVSSPTSANDYFDITMTDAASATNTFTSSTAVTNFNFTGVYQSVRFTWDNDPDNTGIVDKILYRQ*
Ga0133547_1191353423300010883MarineKVQGTMVSNPSAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDPGNTGRVDKILYRQ*
Ga0182093_175082513300016745Salt MarshTPTSGDWFDITMDGEASATNTFSNSTTVTNYNFTGVFHNIRFTWDNDAGNTGLIDKILYR
Ga0182082_117389523300016771Salt MarshMSSTPGSGDWFDITMDGEASPTNTFTNSTTVTNYNFTGVFHNIRFTWGNDTGNTGLIDKILYRQ
Ga0180120_1015939923300017697Freshwater To Marine Saline GradientMSSTPGSGDWFDITMDGEASATNTFSNSTTVTNYNFTGVFHNIRFTWDNDAGNTGLIDKILYRQ
Ga0181403_102444113300017710SeawaterAKDFFDITMDGAASPTNTFSASSGITTFNFTGVYQNVRFTWDNDPDNTGKIDKILYRQ
Ga0181404_108524523300017717SeawaterVYTKNFTGSLKIQGSMASSPTTVDDWFDITVEGGASATNTFTSSTTVTTFNFYGVYQNVRFTWDNDPDNTGIVDKILYRQ
Ga0181417_117009123300017730SeawaterQGTMSTSPEETDYFDITMEGASEPANSFSSSTTVTTFNFTGVYQNIRFSWGNSSGNTGVIDKILYRQ
Ga0181416_101023043300017731SeawaterDITMNDASGPANSFSSSTTVTTFNFTGVYQNVRFKAVRSTGTTGRVDKILYRQ
Ga0181418_102590313300017740SeawaterSESDYFDITMEDASGPANSFTDSTTVTNFNFTGVYHSVRFSWGNSTDNTGVIDKILYRQ
Ga0181399_103672913300017742SeawaterGTMSASPSNTDYFDITMEGAGSSANLFSSSTTVTNFNFTGVYHSVRFSWGNDTSNTGVIDKILYRQ
Ga0181389_105341323300017746SeawaterYFDITMEGAGSTANSFSDSTTVSNFNFTGVYHSVRFSWGNDSGNTGVVDKILYRQ
Ga0181407_116120023300017753SeawaterGSMASSPTTVDDWFDITVEGGASATNTFTSSTTVTTFNFYGVYQNVRFTWDNDPDNTGIVDKILYRQ
Ga0181411_119918823300017755SeawaterTSPEETDYFDITMNDASGPANSFSSSTTVTTFNFTGVYQNVRFSWGNSTGNTGVIDKILYRQ
Ga0181409_111804013300017758SeawaterDITMEGAGSTANSFSDSTTVSNFNFTGVYHSVRFSWGNDSGNTGVVDKILYRQ
Ga0181385_114332723300017764SeawaterYFDITMEGAGSTANSFSSSTAVTNFNFTGVYQNVRFSWGNDTGNTGVIDKILYRQ
Ga0181386_110998013300017773SeawaterVQGTMSASPSNTDYFDITMEGAGSTANSFTSSTTVTNFNFTGVYHSVRFSWGNDTGNTGVIDKILYRQ
Ga0181394_111311513300017776SeawaterTMSASPSNADYFDITMEGAGSTANSFTDSTTVTNFNFTGVYHSVRFSWGNSTGNTGVIDKILYRQ
Ga0181423_122163513300017781SeawaterTMSASPSNTDYFDITMEGAGSPANTFSDSTTVSNFNFTGVYQNVRFSWGNDSGNTGVIDKILYRQ
Ga0181565_1094272923300017818Salt MarshFDITMDGASVPANSFTSSSTVTNFNFTGVYQFVRFAWGNDSGNTGVIDKILYRQ
Ga0181577_1016079433300017951Salt MarshNTDYFDITMEGAGSTANSFSNSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0181589_1004262853300017964Salt MarshASDDWFDITMDGGANATNTFTNSTAVTNYNFTGVFHNIRFTWSNDSSNTGVIDRILYRQ
Ga0181589_1050658923300017964Salt MarshSDDWFDITMDGEANSTNTFTNSTTVTNYNFTGVFHNIRFTWGNDSGNTGVIDKILYRQ
Ga0181561_1052241423300018410Salt MarshLRVQGTMSASPSNTDYFDITMEGAGSTANTFSNSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0181559_1031393623300018415Salt MarshYFDITMEGAGSPTNTFSSSTAVTNFNFTGVYHGIRFSWGNDTGNTGVIDKILYRQ
Ga0181592_1032358723300018421Salt MarshITMDGAASSTNTFSSSTTVTDYNFYGVFHNIRFSWGNDNGNTGIIDKILYRQ
Ga0181599_113941513300020178Salt MarshNSDYFDITMEGAGSTANTFSSSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0181578_1018247423300020189Salt MarshNFSGTLRVQGTMSASPGSSDWFDITMDGASSTANTFSSSTTVTNYNFYGVYHNVRFSWGNDSGNTGVIDKILYRQ
Ga0181604_1007117213300020191Salt MarshALRVLGTMSASPSNTDYFDITMEGAGSTANSFTNSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0211652_1008428723300020379MarineMSATPSNSDYFDITMEGAGSTANSFTSSTAVTNFNFTGVYHSVRFSWGNDTGNNGVIDKILYRQ
Ga0211583_1004694243300020397MarineFSGTLRVQATMSASPSDSDFFDVTMDGEASASNSFTDSTTVTNFNFTGVYHSVRFAWGNDTDNTGLIDKILYRQ
Ga0211651_1030886513300020408MarineFDITLDGEASSTNTFTDSTTVTNFNFTGVYHSVRFAWGNDTGNTGVIDKILYRQ
Ga0211521_1003464813300020428MarineTMEGAGSTANSFTSSTAVTNFNFTGVYHSVRFSWGNSTGNTGVIDKILYRQ
Ga0211545_1018508323300020452MarineTTANDFFDITMDGAASATNTFSSSTTVTMFNFFGVYQNVRFTWDNDPDNTGIVDKILYRQ
Ga0211545_1040810513300020452MarineSPSNTDYFDITMEGAGSTANSFTSSTTVTNFNFTGVYHSVRFSWGNDTGNTGVIDKILYR
Ga0211475_1027399413300020468MarineTMDGAASATNTFSSSTTVTMFNFFGVYQNVRFTWDNDPDNTGIVDKILYRQ
Ga0206678_1037571113300021084SeawaterNITLDGQSSPVTFSSSTTVTNYNFYGVFHYVRFSWDNDSGNTGVIDKILYRR
Ga0206678_1052455313300021084SeawaterDITMDGESSPVTFSSSTTVTNYNFYGVYHYIKFSWDNDTGNTGVIDKILYRR
Ga0213863_1018123713300021371SeawaterDITMDSAGSTANTFSSSTTVTNYNFYGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0206685_1003282933300021442SeawaterPVSEVDYFDITLDGQSSPVTFSSSSTVTNYNFYGVFHSVRFSWGNDTSNIGVIDKILYRQ
Ga0206681_1021005423300021443SeawaterGTMASSPANADYFNITLDGESSPVTFSSSSTVTNYNFYGVFHYVRFSWDNDTDNTGIIDKILYRR
Ga0222717_1003186243300021957Estuarine WaterGTMSASPSNTDYFDITMEGAGSTANTFSSSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0222715_1008892333300021960Estuarine WaterMSSTPGSGDWFDITMDGEASATNTFTNSTTVTNYNFTGVYHNIRFTWGNDAGNTGLIDKILYRQ
Ga0187833_1060405713300022225SeawaterYFDITLDGQSSPVTFSSSTTVTNYNFYGVFHYVRFSWDNDTDNTGVIDKILYRR
Ga0255769_1008415333300022927Salt MarshSGALRVQGTMSASPSNADYFDITMEGAGSTANSFSNSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0255780_1014449423300022935Salt MarshGTLRVQGTMSANPESSDWFDITMDGAGSTANTFSSSTTVTTYNFYGVFKYVRFSWENNSGNTGLIDKILYRQ
Ga0255764_1003311713300023081Salt MarshWFDITMDGGANATNTFTNSTAVTNYNFTGVFHNIRFTWSNDSGNTGVIDRILYRQ
Ga0255764_1026597023300023081Salt MarshDWFDITMDSAGSTANTFSSSTTVTNYNFYGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0255751_1019292213300023116Salt MarshSLRVQGTMSSAPGSDDWFDITMDGAASSTNTFSSSTTVTDYNFYGVFHNIRFSWGNDNGNTGIIDKILYRQ
(restricted) Ga0233438_1023870123300024255SeawaterRVQGTMSASPSNTDYFDITMEGAGSTANTFSSSTTVTNFNFTGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0228651_106727423300024293SeawaterTDYFDITMEGAGSPANTFSDSTTVSNFNFTGVYQNVRFSWGNDSGNTGVIDKILYRQ
Ga0208298_102758523300025084MarineSPSNTDYFDITMEGAGSTANSFSDSTTVSNFNFTGVYHSVRFSWGNDSGNTGVIDKILYR
Ga0209535_101989213300025120MarineITMEGAGSTANSFTDSTTVTNFNFTGVYHSVRFSWGNDTGNTGVIDKILYRQ
Ga0209535_102941213300025120MarineVYTRGSFTGTLKVQGTMSSSPSSANDYFDITMDGEASATNTFSSSSTITNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ
Ga0209535_116950013300025120MarinePTLASDYFDITMTDAAGATNTFTSSTAVTNFNFTGVYQSVRFTWDNDPDNTGLVDKILYR
Ga0209336_1006939023300025137MarineKDFTGSLKVQGTMASSPTSADDYFDITMTDAASATNTFTSSTAVTNFNFTGVYQNVRFTWDNDPDNTGIVDKILYRQ
Ga0209634_120368623300025138MarineAVYTRGSFTGTLKVQGTMSSSPSSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ
Ga0209337_125644313300025168MarineLKVQGTMSSSPSSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ
Ga0209196_106872523300025654Pelagic MarineVSNPSAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDPGNTGLVDKILYRQ
Ga0208019_119767023300025687AqueousQGTMSANPGSSDWFDITMDGSASTANTFSSSTTVTNYNFYGVYHNVRFSWGNNSGNTGVIDKILYRQ
Ga0209362_103484643300025770MarineTMEGAGSTANSFSDSTTVSNFNFTGVYHSVRFSWGNDSDNTGVVDKILYRQ
Ga0208547_120894323300025828AqueousDITMDGAGSTANTFSSSTTVTNYNFYGVYHSVRFSWGNDSGNTGVIDKILYRQ
Ga0209534_1027005523300025880Pelagic MarineFDITMEGAGSTANSFSDSTTVSNFNFTGVYHSVRFSWGNDTGNTGVIDKILYRQ
Ga0209953_104172813300026097Pond WaterSGSMRVQGTMSSTPGSGDWFDITMDGEASATNTFTNSTTVTNLNFTGVYHNIRFTWGNDAGNTGLIDKILYRQ
Ga0207986_103647423300026192MarineSSPASADYFDITLDGQSSPVTFSSSTTVTNYNFYGVFHYVRFSWDNDTGNTGTIDKLLYR
Ga0209384_113262313300027522MarineQGTMSVTPGNTDWFDITMDGVGSRTSSFSNSTSVTNYNFYGVYQSVRFSWQNDSGNAGLIDKILYRQ
Ga0209383_115799913300027672MarineIAVYTKDFTGSLKVQGTMSTSPTTASDYFDVIMDGEATSTNQFTSSTAVTNFNFTGVYQSVRFTWDNNPDNTGLVDKILFRQ
Ga0209830_1006009213300027791MarineTLKVQGTMSSSPSSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ
Ga0209090_1004244313300027813MarineTMSSSPSSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVFQSVRFTWDNDPSNTGLVDKILYRQ
Ga0256368_107216713300028125Sea-Ice BrineVSNPSAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDTGNTGIVDKILYRQ
Ga0257112_1010132723300028489MarineTPENDDYFDITLDGEASPTITFSSSSTVTNHNFYGVYSNVRFTWGSDAGNNGIVDKILYR
Ga0257111_107446523300028535MarineYFNITLDGESSPVTFSSSTTVTNYNFYGVFHYVRFSWDNDSGNTGVIDKILYRS
Ga0308022_101536133300031142MarineSGGLRVQGTMSVTPGNTDWFDITMDGVGSRTSSFSNSTSVTNYNFYGVYQSVRFSWQNDSGNAGLIDKILYRQ
Ga0308022_110148223300031142MarineDFFDITMDGAGSATNTFSSSSTVTNFNFFGVYDSIRFSWDNDASNTGKIDKILYRQ
Ga0308022_116646423300031142MarineNFTGSLKVQGTMASTPGSADFFDITMDGEASSTNTFSSSTGVTNFNFFGVYHSVRFSWDNDPSNTGLVDKILYRQ
Ga0308025_106912633300031143MarineVTPGNTDWFDITMDGVGSRTSSFSNSTSVTNYNFYGVYQSVRFSWQNDSGNAGLIDKILYRQ
Ga0307488_1028751713300031519Sackhole BrineVQGTMVSNPSAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDPGNTGRVDKILYRQ
Ga0302137_101700413300031588MarineSSPSSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ
Ga0302137_111029623300031588MarineTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDPGNTGLVDKILYRQ
Ga0302131_120074823300031594MarineSATPGESDYFDITMEDAGSPANSFTNSTTVTNFNFTGVYHSVRFGWGNSASNTGVIDKILYRQ
Ga0302116_108997723300031597MarineYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDPGNTGLVDKILYRQ
Ga0308007_1001312813300031599MarineQGTMVSNPSAPTDYFDITMDNEASATNTFSGSTGVTNFNFTGVYHNVRFTWGNDTGNTGLVDKILYRQ
Ga0302119_1036246513300031606MarineDYFNITLDGESSPVTFSSSSTVTNYNFYGVFHNVRFSWDNDTGNTGVIDKILYRR
Ga0302114_1024335023300031621MarineQGTMASTPGSADFFDITMDGEASSTNTFSSSTGVTNFNFFGVYHSVRFSWDNDPSNTGLVDKILFRQ
Ga0302121_1010267613300031626MarineQGTMSSSPSSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ
Ga0302118_1038710523300031627MarineNITLDGESSPVTFSSSSTVTNYNFYGVFHYVRFSWDNDTDNTGVIDKILYRS
Ga0302118_1048036213300031627MarineYTRGSFTGTLKVQGTMSSSPSSANDYFDITMDGEASATNTFSSSSTITNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ
Ga0302117_1018672513300031639MarineSANDYFDITMDGEASATNIFSSSSTVTNFNFTGVYQSVRFTWDNDPDNTGLVDKILYRQ
Ga0308001_1030386923300031644MarineNTDWFDITMDGVGSRTSSFSNSTSVTNYNFYGVYQSVRFSWQNDSGNAGLIDKILYRQ
Ga0302120_1009398323300031701MarineTVKVQGTMVSSPTAPTEWFDITMDGESVPANTFSSSTGVTTYNFYGVYHNVRFTWDNDPDNTGLVDKILYRQ
Ga0315322_1073300213300031766SeawaterKNFSGALRVQGTMASSPANADYFNITLDGESSPVTFSSSTTVTNYNFYGVFHNVRFSWDNDTGNTGVIDKILYRR
Ga0310123_1000117413300031802MarineRVQGTMSSSPASADYFNITLDGQSSPVTFSSSTTVTNYNFYGVFHYVRFSWDNDTDNTGTIDKLLYRR
Ga0310125_1007100033300031811MarineFSGALRVQGTMSSSPADADFFNITLDGESSPVTFSSSSTVTDYNFYGVFHYVRFSWDNDTGNTGIIDKILYRR
Ga0310125_1019676923300031811MarineRVQGTMASSPANADYFNITLDGESSPVTFSSSSTVTNYNFYGVFHNVRFSWDNDTGNTGVIDKILYRR
Ga0315319_1056380513300031861SeawaterFNITLDGQSSPVTFSSSSTVTNYNFYGVFHYVRFSWDNDTGNTGVIDKILYRR
Ga0315318_1021412623300031886SeawaterDITLDGQSSPVTFSSSSTVTNYNFYGVFHSVRFSWGNDTSNIGVIDKILYRQ
Ga0315327_1063182323300032032SeawaterNFSGALRVQGTMSSSPANADYFNITLDGESSPVTFSSSTTVTNYNFYGVFHYVRFSWDNDTGNTGIIDKILYRS
Ga0315315_1130083423300032073SeawaterSPADADYFDITLNDSTTTHTFSSSTTVTDFNFTGVYHYVRFSWDNDTGNTGIIDKVLYRH
Ga0310342_10243018213300032820SeawaterGTMTSSPASADYFNITLDGESSPVTFSSSTTVTNYNFYGVFHYVRFSWDNDTGNTGVIDKILYRR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.