Metagenome / Metatranscriptome Family F056028

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056028
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	112 residues
Representative Sequence	MNPKRSTSRGYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRAASRIPHPPEAPISGKDEFFLSYHPLRAPPSA
Number of Associated Samples	98
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.99 %
% of genes near scaffold ends (potentially truncated)	23.19 %
% of genes from short scaffolds (< 2000 bps)	71.74 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.913 % of family members)
Environment Ontology (ENVO)	Unclassified (26.087 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.072 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.54% β-sheet: 0.00% Coil/Unstructured: 77.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF03737	RraA-like	14.49
PF00486	Trans_reg_C	12.32
PF00072	Response_reg	11.59
PF16576	HlyD_D23	4.35
PF13620	CarboxypepD_reg	3.62
PF00873	ACR_tran	3.62
PF02518	HATPase_c	2.17
PF13533	Biotin_lipoyl_2	1.45
PF08240	ADH_N	0.72
PF00444	Ribosomal_L36	0.72
PF02321	OEP	0.72
PF05235	CHAD	0.72
PF00512	HisKA	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	14.49
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.45
COG0257	Ribosomal protein L36	Translation, ribosomal structure and biogenesis [J]	0.72
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.72
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.04 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.97 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.35 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.97 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	4.35 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.42 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	4.35 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.72 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.42 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4.35 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.72 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.42 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	3.62 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.72 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10038153	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2000	Open in IMG/M
3300004092\|Ga0062389_100995783	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300004152\|Ga0062386_100066073	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300005332\|Ga0066388_100340117	All Organisms → cellular organisms → Bacteria → Acidobacteria	2147	Open in IMG/M
3300005533\|Ga0070734_10572304	Not Available	643	Open in IMG/M
3300005534\|Ga0070735_10003041	All Organisms → cellular organisms → Bacteria	14837	Open in IMG/M
3300005537\|Ga0070730_10471707	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	807	Open in IMG/M
3300005541\|Ga0070733_10269458	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300005541\|Ga0070733_10331381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300005542\|Ga0070732_10003161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8844	Open in IMG/M
3300005542\|Ga0070732_10089740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1804	Open in IMG/M
3300005602\|Ga0070762_10327555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300005610\|Ga0070763_10220700	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300006047\|Ga0075024_100479950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300006050\|Ga0075028_100002518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6750	Open in IMG/M
3300006050\|Ga0075028_100043432	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300006050\|Ga0075028_100313292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300006050\|Ga0075028_100583240	Not Available	662	Open in IMG/M
3300006050\|Ga0075028_100863443	Not Available	555	Open in IMG/M
3300006162\|Ga0075030_100353305	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300006162\|Ga0075030_100952114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300006172\|Ga0075018_10199016	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300006176\|Ga0070765_100945886	Not Available	815	Open in IMG/M
3300006358\|Ga0068871_101403479	Not Available	658	Open in IMG/M
3300009090\|Ga0099827_10780804	Not Available	826	Open in IMG/M
3300009700\|Ga0116217_10618786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300009824\|Ga0116219_10615826	Not Available	596	Open in IMG/M
3300009839\|Ga0116223_10682814	Not Available	590	Open in IMG/M
3300010375\|Ga0105239_11974497	Not Available	677	Open in IMG/M
3300010379\|Ga0136449_100012048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23575	Open in IMG/M
3300010379\|Ga0136449_101057146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300010379\|Ga0136449_101733131	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300011120\|Ga0150983_10491976	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300011120\|Ga0150983_11720284	Not Available	586	Open in IMG/M
3300011120\|Ga0150983_13875962	Not Available	645	Open in IMG/M
3300011120\|Ga0150983_14596024	Not Available	558	Open in IMG/M
3300011120\|Ga0150983_16375886	Not Available	550	Open in IMG/M
3300011269\|Ga0137392_10725460	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300011270\|Ga0137391_11258019	Not Available	587	Open in IMG/M
3300011271\|Ga0137393_10714587	Not Available	858	Open in IMG/M
3300012019\|Ga0120139_1045502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300012202\|Ga0137363_10005869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7597	Open in IMG/M
3300012361\|Ga0137360_10537664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300012363\|Ga0137390_11211674	Not Available	702	Open in IMG/M
3300014501\|Ga0182024_10025955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10312	Open in IMG/M
3300014654\|Ga0181525_10731593	Not Available	556	Open in IMG/M
3300014968\|Ga0157379_10069535	All Organisms → cellular organisms → Bacteria	3149	Open in IMG/M
3300015245\|Ga0137409_10899073	Not Available	721	Open in IMG/M
3300017822\|Ga0187802_10175502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300017823\|Ga0187818_10047237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1849	Open in IMG/M
3300017823\|Ga0187818_10097081	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300017927\|Ga0187824_10029969	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300017927\|Ga0187824_10047620	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300017930\|Ga0187825_10008564	All Organisms → cellular organisms → Bacteria	3428	Open in IMG/M
3300017930\|Ga0187825_10014053	All Organisms → cellular organisms → Bacteria	2679	Open in IMG/M
3300017930\|Ga0187825_10283923	Not Available	613	Open in IMG/M
3300017932\|Ga0187814_10153170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	859	Open in IMG/M
3300017933\|Ga0187801_10000247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13514	Open in IMG/M
3300017934\|Ga0187803_10001760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8508	Open in IMG/M
3300017936\|Ga0187821_10004732	All Organisms → cellular organisms → Bacteria	4528	Open in IMG/M
3300017936\|Ga0187821_10049097	All Organisms → cellular organisms → Bacteria → Acidobacteria	1512	Open in IMG/M
3300017942\|Ga0187808_10020864	All Organisms → cellular organisms → Bacteria → Acidobacteria	2650	Open in IMG/M
3300017955\|Ga0187817_10772565	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	613	Open in IMG/M
3300017993\|Ga0187823_10280831	Not Available	573	Open in IMG/M
3300017994\|Ga0187822_10073865	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300017995\|Ga0187816_10342666	Not Available	659	Open in IMG/M
3300018006\|Ga0187804_10067777	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300018007\|Ga0187805_10082051	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300018017\|Ga0187872_10407782	Not Available	574	Open in IMG/M
3300019185\|Ga0184587_110533	Not Available	536	Open in IMG/M
3300020199\|Ga0179592_10050150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1898	Open in IMG/M
3300020579\|Ga0210407_10628813	Not Available	836	Open in IMG/M
3300020580\|Ga0210403_10135698	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300020580\|Ga0210403_10592324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300020581\|Ga0210399_10085508	All Organisms → cellular organisms → Bacteria → Acidobacteria	2566	Open in IMG/M
3300020581\|Ga0210399_10302908	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300020581\|Ga0210399_10711411	Not Available	825	Open in IMG/M
3300020581\|Ga0210399_10793314	Not Available	774	Open in IMG/M
3300020581\|Ga0210399_10908017	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300020583\|Ga0210401_10000261	All Organisms → cellular organisms → Bacteria	67353	Open in IMG/M
3300021168\|Ga0210406_11328652	Not Available	516	Open in IMG/M
3300021171\|Ga0210405_10212034	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300021171\|Ga0210405_10791736	Not Available	727	Open in IMG/M
3300021178\|Ga0210408_10279684	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300021180\|Ga0210396_10062202	All Organisms → cellular organisms → Bacteria	3405	Open in IMG/M
3300021181\|Ga0210388_10015211	All Organisms → cellular organisms → Bacteria → Acidobacteria	6158	Open in IMG/M
3300021181\|Ga0210388_10223740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1649	Open in IMG/M
3300021402\|Ga0210385_10931794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	667	Open in IMG/M
3300021403\|Ga0210397_10219245	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300021407\|Ga0210383_11138710	Not Available	658	Open in IMG/M
3300021420\|Ga0210394_10028780	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5024	Open in IMG/M
3300021420\|Ga0210394_10194206	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300021420\|Ga0210394_10401156	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300021420\|Ga0210394_11054643	Not Available	702	Open in IMG/M
3300021420\|Ga0210394_11188745	Not Available	655	Open in IMG/M
3300021432\|Ga0210384_10101517	All Organisms → cellular organisms → Bacteria	2580	Open in IMG/M
3300021432\|Ga0210384_11532148	Not Available	572	Open in IMG/M
3300021433\|Ga0210391_10069404	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300021478\|Ga0210402_10656070	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300021479\|Ga0210410_10203489	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300021559\|Ga0210409_10002410	All Organisms → cellular organisms → Bacteria → Acidobacteria	22306	Open in IMG/M
3300022726\|Ga0242654_10316329	Not Available	579	Open in IMG/M
3300024232\|Ga0247664_1083533	Not Available	738	Open in IMG/M
3300025927\|Ga0207687_10093926	All Organisms → cellular organisms → Bacteria → Acidobacteria	2194	Open in IMG/M
3300025928\|Ga0207700_11831151	Not Available	533	Open in IMG/M
3300027667\|Ga0209009_1144418	Not Available	605	Open in IMG/M
3300027812\|Ga0209656_10190983	Not Available	999	Open in IMG/M
3300027842\|Ga0209580_10238706	Not Available	904	Open in IMG/M
3300027894\|Ga0209068_10015203	All Organisms → cellular organisms → Bacteria	3701	Open in IMG/M
3300027908\|Ga0209006_10048932	All Organisms → cellular organisms → Bacteria → Acidobacteria	3802	Open in IMG/M
3300027908\|Ga0209006_10286453	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300027908\|Ga0209006_10739821	Not Available	802	Open in IMG/M
3300027986\|Ga0209168_10002033	All Organisms → cellular organisms → Bacteria → Acidobacteria	15082	Open in IMG/M
3300030659\|Ga0316363_10410856	Not Available	525	Open in IMG/M
3300030730\|Ga0307482_1317115	Not Available	505	Open in IMG/M
3300030743\|Ga0265461_12984860	Not Available	568	Open in IMG/M
3300031057\|Ga0170834_107841513	Not Available	676	Open in IMG/M
3300031090\|Ga0265760_10015357	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300031090\|Ga0265760_10190612	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300031128\|Ga0170823_17616229	Not Available	640	Open in IMG/M
3300031231\|Ga0170824_128445382	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300031234\|Ga0302325_11032230	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300031234\|Ga0302325_11277259	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300031525\|Ga0302326_10607789	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300031708\|Ga0310686_107527565	Not Available	659	Open in IMG/M
3300031708\|Ga0310686_111841690	All Organisms → cellular organisms → Bacteria	3330	Open in IMG/M
3300031708\|Ga0310686_112498022	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300031708\|Ga0310686_118509740	All Organisms → cellular organisms → Bacteria	2770	Open in IMG/M
3300031715\|Ga0307476_10847833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	675	Open in IMG/M
3300031823\|Ga0307478_10194397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	1630	Open in IMG/M
3300031962\|Ga0307479_10013258	All Organisms → cellular organisms → Bacteria	7716	Open in IMG/M
3300031962\|Ga0307479_10013544	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7642	Open in IMG/M
3300032160\|Ga0311301_10002480	All Organisms → cellular organisms → Bacteria	70183	Open in IMG/M
3300032160\|Ga0311301_10069392	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7476	Open in IMG/M
3300032160\|Ga0311301_10605208	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300032515\|Ga0348332_11761673	Not Available	629	Open in IMG/M
3300033486\|Ga0316624_10030237	All Organisms → cellular organisms → Bacteria	3215	Open in IMG/M
3300034282\|Ga0370492_0054129	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.10%
Host-Associated	Host-Associated	2.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.74%
Aquatic	Environmental → Aquatic	25.36%
Plants	Host-Associated → Plants	2.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.84%
Freshwater	Environmental → Aquatic → Freshwater	18.12%
Sediment	Environmental → Aquatic → Sediment	7.25%
Peat	Environmental → Terrestrial → Peat	2.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.17%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.12%
Loam	Environmental → Terrestrial → Soil → Loam	10.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.17%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	14.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	14.49%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.25%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.17%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100381532	3300001867	Forest Soil	MNSARSISGYRVICLFLASAVLCLGIIQWSFLPILVQNEPVASRPVLGVSAGHTAKFAAPYKCLFGDGLRPCLAQSRITVQRLASGLVRLPEAPISGHNEFFLSHYPLRAPPSA*
Ga0062389_1009957832	3300004092	Bog Forest Soil	MKPIRNPRRRYAALLFVALAVLVFGIVQWSFLPILIQNGPVGGAAVLEMSAGHSAKFAAPFKCLFGDGLGPCLVQSRIIVRRIASRVIHPPEAPISGKDVFFLSYYPLRAPPSA*
Ga0062386_1000660732	3300004152	Bog Forest Soil	MNLNRPSNRLCVAALILLSGVLILGIVQWSFLPILIQNGPVGSASVLEMSAGHSSKFAAPFKCLFDDGLRPCLVQTRIIIRSVAVRMPHPAETPLFGKDEFFLSYHPLRAPPSA*
Ga0066388_1003401171	3300005332	Tropical Forest Soil	MLASKSYRNLHWFWSQMNSVRSINRCRAVCLFLASAVLCLGIVQWSFLPILVQNAPPAHNPILEGSVGHTAKFAAPYKYLFGSGLRPCLMQSRITVPRTASWILHLPETPISAQDDFSLSDHPLRAPPSV*
Ga0070734_105723042	3300005533	Surface Soil	RRYIVCLCLLSGVLALGIIQWSFLPILIQNGPIGSSGMLEISGHSSKFAAPFKCLFGDGLRPCVVQSRITVRRIAFRIPPPPEAEISGKHEVFLSYQPLRAPPSA*
Ga0070735_100030418	3300005534	Surface Soil	MNSMTNSKRTLSRRTILCLCLLSGVLVLGIIQWSFLPILIQNGPIGSSGMLEISGHSSKFAAPFKCLFSDGLRPCLVQSRITVRRIAFRIPHTPEAETYGKREVFLTYQPLRAPPSA*
Ga0070730_104717072	3300005537	Surface Soil	MFPQRVTTRRYIVCLMALSAVLVLGIVQWSFLPILIQNGPIGTSGMLEISGHSSKFAAPFKCLYGDGLRPCVVQSRITVRRIVFRIPLPPEAEISGKQEAFLSWLPLRAPPST*
Ga0070733_102694582	3300005541	Surface Soil	MNLNRTPSRRYLACLLLISGVLVLGIIQWSFLPILIQNGPGTCTSVLEVSASHTSKFAAPFKCLLGDGLNPCLVQSRITVRRIASRIIRLPDVPVSG
Ga0070733_103313812	3300005541	Surface Soil	MNPKRSPNRRYVACLLLLSGVLALGIIQWSFLPILIQNGPAASTGVEELSASHTSKFAAPFKCLLGDGLNPCLVQSRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSAS*
Ga0070732_100031617	3300005542	Surface Soil	MNPERTPSRRYIVCLHLLLGVLVLGIVQWSFLPILIQNGPGTSAGVLGVSASHTSKFAAPFKCLFGDGLNPCLVQTRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSA*
Ga0070732_100897401	3300005542	Surface Soil	MNPKRSPNRGYGVCLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLEMSAGHSSKFAAPFKCLFGDGLNPCLVQSRITVRRVAYRISLLPEALVSGKDDFFLLPPAARATLRINKYKQGWFPAVIPVQNLEQTDSFAMAD*
Ga0070762_103275552	3300005602	Soil	MNPKHTSSRRYLACLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAVLEMSAGHSSKFAAPFKCLFGDGLKPCLVQSKITVRRVASRIPHPPEAQFSGADVFFLSYHPLRAPPSA*
Ga0070763_102207002	3300005610	Soil	IFWQDASLDTVTQPPQAMRKPRMNPMRSPSRGYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLEMSAGHSSKFAAPFKCLFGDALNPCLVQSRITVRRVASRIPHLPEALVSGKDDFFLSCHPLRAPPSA*
Ga0075024_1004799502	3300006047	Watersheds	MNPKRSPNRGYGVCLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLEMSAGHSSKFAAPFKCLFGDGLNPCLVQSRITVRRVAYRISLLPEALVSGKDDFFLSCHPL
Ga0075028_1000025185	3300006050	Watersheds	MNPKRSPNRGYGVCLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLEMSAGHSSKFAAPFKCLFGDGLNPCLVQSRITVRRVAYRISLLPEALVSGKDDFFLSCHPLRAPPSA*
Ga0075028_1000434323	3300006050	Watersheds	MNPERTPSRRYIVCLLLLLGVLVLGIVQWSFLPILIQNGPGTSAGVLGVSASHTSKFAAPFKCLFGDGLNPCLVQTRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSA*
Ga0075028_1003132921	3300006050	Watersheds	MNPKRSTSRRYLACLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRGIASRIPHLPEAQFSGQDDFFLSSTRSARRLPHKYKQGSVPA
Ga0075028_1005832401	3300006050	Watersheds	MNPKHTSSRRYLACLLLLSGVLVLGIVQWSFLPILIQNGPVGSTAVLEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRVTAQRVASRIPHPPEAQLSGNDVFYLSFHPLRAPPSA*
Ga0075028_1008634432	3300006050	Watersheds	MNPKRIPSRRFIACLLLLSGVLVLGIVQWSFLPILIQNGPVGSMAVLDISAGHSSKFAAPFKCLFGDGPKPCPVQARIAARRISSRIPHAPEAPILCKDEFLLSYHPMRAPPSA*
Ga0075030_1003533052	3300006162	Watersheds	MNSKRSPNRRYVACLFLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKALFGDGLNPCLVQSRITVRKVVSRIPHLPEALISGKDDFFLSYHPLRAPPSA*
Ga0075030_1009521142	3300006162	Watersheds	MNPERTPSRRYVVCLLLLSGVLVLGIVQWSFLPILIQNGPGTSAGVLGVSASHTSKFAAPFKCLFGDGLNPCLVQTRITVRRIASRIVRLPDAPISG
Ga0075018_101990162	3300006172	Watersheds	MNPQRTPSRRFAACLLLLACVLVLGIVQWSFLPILIQNGPSTNATVQDLSASHSSKFAAPFKFLFGDRLNPCIAPSRITLQRVASAFVRLPDAPISMQYDFSLTQPPLRAPPSAS*
Ga0070765_1009458862	3300006176	Soil	MNPTRTPSRRYVACLVLLSSVLVFGIIQWSFLPILIQNGPVASPAALEMSAGHSSKFAAPFKCLFGDGLMPCLAQSRITVRRAATRITHPPEAQSSGHDAFFLSYHPLRAPPSE*
Ga0068871_1014034791	3300006358	Miscanthus Rhizosphere	MNPTRPTNRDYLALLLLLSGVLVLGIVQWSFLPILIQNGAVGNSAVLEMSGGHSSKFAAPFKCLFGNGLKPFVVRSRISVPAVSSRMLEPADIPTFWNEPFFLSNYPLRAPPSA*
Ga0099827_107808042	3300009090	Vadose Zone Soil	MNPKRTPTRLYYAGLLLLSGVLVLGIVQWSFLPILIQNGPVASTPALEMSAGHSSKFAAPFKGLFLLGDGLKPCLVESRITLRRLVSRIPHPPEAQFTGKDDFFLSYHPLRAPPSA*
Ga0116217_106187862	3300009700	Peatlands Soil	MNPKRSTSRRYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAALEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRIASRIPHPPEAPISGKDEFFLSYHPLRAP
Ga0116219_106158261	3300009824	Peatlands Soil	RRYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAALEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRIASRIPHPPEAPISGKDEFFLSYHPLRAPPSA*
Ga0116223_106828141	3300009839	Peatlands Soil	MNPKRTPSRPYVACLLLLSGVLVLGIIQWSILPILIENGPGTGTAVLGVSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSAS*
Ga0105239_119744972	3300010375	Corn Rhizosphere	YAACLLLLSGLLILGIVQWSFLPLLIQNGPAASTAVVEVSAGHSSKFAAPFKFLFGDGLRPCLVQSRITVRWLAFRIPHPSVIPISGKDDFFLSDHPLRAPPAA*
Ga0136449_10001204810	3300010379	Peatlands Soil	MNPKRSTSRRYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAALEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRIASRIPHPPEAPISGKDEFFLSYHPLRAPPSA*
Ga0136449_1010571462	3300010379	Peatlands Soil	MNPKRIPSRRYVASLLLLSGVLVLGLVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPYKCLFGDGLKPCLAQTRINVRRTASRIPHPPEASISGKDEFFLSYHPLRAPPSA*
Ga0136449_1017331312	3300010379	Peatlands Soil	LSGVLVLGIIQWSFLPILIQNGPGTSTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPEAPISGQDDFSLTHRPLRAPPSA*
Ga0150983_104919762	3300011120	Forest Soil	MNPTPFTTRRYVVFLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEVSAGHSSKFVAPFKCLFGDGLRPCLVQSRITVQRIATKIPHPPEAPISGQNDFFLSFHPLRAPPSS*
Ga0150983_117202841	3300011120	Forest Soil	MNPKRTPSRRYAVFIFLLSGVLLLGIVQWSILPILIQDGPSASTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRISVRRIASRIVPLPDAPISGQDDFSLTHRPLRAPPSA*
Ga0150983_138759621	3300011120	Forest Soil	MNPKHTPSRWYLMFLLLVSGVLVLGIIQWSFLPLLIQGGQISKTAVLELSASHTSKFAAPFKCLFGDGPNPCLMQSRITVRRIASRAVRLPDAPISGQDDFSLTHRALRAPPSA*
Ga0150983_145960241	3300011120	Forest Soil	MNPNRIPTRRYIAFLILLSGVLVLGIVQWSFLPILIQNGPVGRAAVLEMSAGHSSKFAAPFKCLFGDGLKPCLVQSRITVRRIAFRMPHPPESKFSGRDDLFLSYNPLRAPPYA*
Ga0150983_163758862	3300011120	Forest Soil	MSSKRSPSRRYVTCLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAALEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRAASRIPHPPEAPISGKDEFFLSYHPLRAPPSA*
Ga0137392_107254601	3300011269	Vadose Zone Soil	MTPQRATTRRYAACLLVLSGVLVLGIIQWSFLPILIQNGPVGSSAILEMSAGHSSKFAAPFKCLFGDGPRPCVPQSRMTVQRVAFRIVVTPEAQIFGQDIFFLSYHPLRAPPSV*
Ga0137391_112580191	3300011270	Vadose Zone Soil	MNPKLSPSRSYFACLLLLSGVLVLGIVQWSFLPILIQNGRVGSTAVLEVSAGHSSKFAAPFKCLFGDGLRPRLVQSRIAVLRIASRIPYPPEVPISGQDDFSLSFHPL
Ga0137393_107145872	3300011271	Vadose Zone Soil	LSGVLVLGIVQWSFLPILIQNGPVASTAALEMSAGHSSKFAAPFKGLFLFGDGLKPCLVESRITLRRIVSRIPHPPEALFTGKDDFFLSYHPLRAPPSA*
Ga0120139_10455021	3300012019	Permafrost	MNPKRTPSRRYVVCLLLLTGVLVLGIVQWSFLPILIQNGPGTSTAVLGVSASHTSKFAAPFKCLFGDGLNPCLVQSRITERRIASRIVRLPDAPISSQDDFSLTHRPLRAPPSA*
Ga0137363_100058696	3300012202	Vadose Zone Soil	MNPKRAPTRLYYAGLLLLSGVLVLGIVQWSFLPILIQNGPVASTAALEMSAGHSSKFAAPFKGLFLFGDGLKPCLVESRSTLRRIVSRIPHPPEAQFTGKDNFFLSYHPLRAPPSA*
Ga0137360_105376641	3300012361	Vadose Zone Soil	MNPKRIPTRRYVVGLLLLSGVLVLGIVQWSFLPILIQNGPVASTAALEMSAGHSSKFAAPFKGLFLFGDGLKPCLVESRSTLRRIVSRIPHPPEAQFTGKDDCFLSYHPLRAPPSA*
Ga0137390_112116742	3300012363	Vadose Zone Soil	MNPKLSPSRSYFACLLLLSGVLVLGIVQWSFLPILIQNGRVGSTAVLEVSAGHSSKFAAPFKCLFGDGLRPRLVQTRIAVLRIASRIPYPPEVPISGQDDFSLSFHPLRAPPSA*
Ga0182024_100259553	3300014501	Permafrost	MNPTRTPSRRYVICLLLLSGVLVLGIVQWSFLPILIQNGPVASTGVLEMSGGHSSKFAAPFKCLFGDGLRPCLVQSRITMRRIATRIPHPPEVRFSGKDDFFLSYHPLRAPPSA*
Ga0181525_107315931	3300014654	Bog	MIPMRSPSRRSIASLIALSAVLVLGIVQWSFLPILIQNGPVGSAAILEMSAGHSSKFAAPFKCLFGDGLGPCLVQSRISVRRIAFRVPHPPEAAISGQHEFFLSYYPLRAPPSA*
Ga0157379_100695352	3300014968	Switchgrass Rhizosphere	MNPTRPTNRDYLALLLLLSGVLVLGIVQWSFLPILIQNGAVGNSAVLEMSGGHSSKFAAPFKCLFGDGLKPFVVRSRISVPAVSSRMLEPADIPTFWNEPFFLSNYPLRAPPSA*
Ga0137409_108990732	3300015245	Vadose Zone Soil	MNPKRTPTRRYFTVLLLLSGVLVLGIVQWSFLPILIQNGPVASTAALEMSAGHSSKFAAPFKGLFLLGDGLKPCLVESRITLRRIVSRIPHPPEAQFTGKDDFFLSYHPLRAPPSA*
Ga0187802_101755021	3300017822	Freshwater Sediment	MNPKRTPSRRYAACILLLSGILVFGIIQWSFLPILIQDGPSNSTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPVSGQDDISLTHRPLRAPPSA
Ga0187818_100472373	3300017823	Freshwater Sediment	MNSKQSTSRRYLACLLLLSGVLVLGIIQWSFLPILIQNGPTGTTAVLELSASHTSKFAAPFKCLFVDGLNPCLVQSRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSA
Ga0187818_100970812	3300017823	Freshwater Sediment	MNPKRTSSRRYIACLLLLSGVLVLGIIQWSILPILIENGPGTGTAVLGVSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSAS
Ga0187824_100299693	3300017927	Freshwater Sediment	CLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLDVSAEHSSKFAAPFKCLFGDALNPCLVQSRITVRSVASRIPRLPEALISGKDDFFLSCHPLRAPPSA
Ga0187824_100476203	3300017927	Freshwater Sediment	FLPLLIQNGPVGKTAVVEVSEHSAKFAAPYKGLFCDGLIPCLVHSRVAVRRVASRTVRLPDAPVSDLDDFSLTHRPLRAPPSA
Ga0187825_100085643	3300017930	Freshwater Sediment	MNPMRSPTRGYITCLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLEVSAEHLSKFAAPFKCLFGDALNPCLVQSRITVRSVASRIPRLPEALISGKDDFFLSCHPLRAPPSA
Ga0187825_100140532	3300017930	Freshwater Sediment	MNPKRTPSRPYFACLLLLSGVLVLGIIQWSILPIMIQNGPGIGTAVLGVSASHTSKFAAPFKCLFGDGLNPCLVQSRITMRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSAS
Ga0187825_102839231	3300017930	Freshwater Sediment	MNPLHAPSRRYLVCLLLLSGVLVLGIVQWSFLPILIQNGPAASTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPICGQDDFSLTHRPLRAP
Ga0187814_101531702	3300017932	Freshwater Sediment	FLQDASLDRLAQPPPGIRRPQMNPERTPSRRYVACILLLSGILVLGIIQWSFLPILIQDGPPASTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPVSGQDDISLTHRPLRAPPSA
Ga0187801_100002475	3300017933	Freshwater Sediment	MNPKYTPSRRYVASILLLSGVLVLGIIQWSFLPLLIQNGPAASTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPISGRDDFSLTHRPLRAPPSA
Ga0187803_100017604	3300017934	Freshwater Sediment	MNPKYTPSRRYVASILLLSGVLVLGIIQWSFLPLLIQNGPATSTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPISGRDDFSLTHRPLRAPPSA
Ga0187821_100047321	3300017936	Freshwater Sediment	MNPMRSPTRGYIACLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLEVSAEHSSKFAAPFKCLFGDALNPCLVQSRITVRSVASRIPRLPEALISGKDDFFLSCHPLRAPPSA
Ga0187821_100490973	3300017936	Freshwater Sediment	MNPKRTPSRRLVISLLLLSGVLVLGIVQWSFLPLLIQNGPVGKTAVVEVSEHSAKFAAPYKGLFCDGLIPCLVHSRVAVRRVASRTVRLPDAPVSDLDDFSL
Ga0187808_100208644	3300017942	Freshwater Sediment	MNSKQSTSRRYLACLLLLSGVLVLGIIQWSFLPILIQNGTSGSTAVLELSASHTSKFAAPFKCLFVDGLNPCLVQSRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSA
Ga0187817_107725652	3300017955	Freshwater Sediment	MKPSRTSRRAPAAALVLLSAILFLGIVQWSFLPILIQNGPVGNAAVLEITAGHSAKFAAPFKGLFSEGLNPCLAPTRITVWRLVSGIVRLPDAPVSGQDDFSLTHRFLRAPPSA
Ga0187823_102808311	3300017993	Freshwater Sediment	MNPMRSPTRGYITCLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLEVSAEHSSKFAAPFKCLFGDALNPCLVQSRITVRSVASRIPRLPEALISGKDDFFLSCHPLRAPPSA
Ga0187822_100738652	3300017994	Freshwater Sediment	MNPVHTARRTSAIVLALLSAVLFLGIVQWSFLPILIQNGPVGNAGLLEMTAGHSAKFAAPFKGLFSEGLNPGLVPTRTTVRRLVSRVVRLPEAPVSGWNDFSLTHRPLRAPPSA
Ga0187816_103426662	3300017995	Freshwater Sediment	MNPERTPSRRYAACILLLSGILVFGIIQWSFLPILIQDGPSNSTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPVSGQDDISLTHRPLRAPPSA
Ga0187804_100677772	3300018006	Freshwater Sediment	MNPKRTPSRRYIGCILLLSGILVLGIIQWSFLPILIQDGPPASTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPVSGQDDISLTHRPLRAPPSA
Ga0187805_100820513	3300018007	Freshwater Sediment	MNPKHTPSRRYVASILLLSGVLVLGIIQWSFLPLLIQNGPAASTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSA
Ga0187872_104077821	3300018017	Peatland	MNPKRTPSRRFVACLLLLSGVLVLGIIQWSFLPILIQNGPGTSTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPEAPISGQDDFSLTHRPLRAPPSA
Ga0184587_1105331	3300019185	Soil	MNPKRTRSRRYAVCIFLLSGVLLLGIVQWSFLPILIQDGPSASTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSA
Ga0179592_100501502	3300020199	Vadose Zone Soil	MNPKRTPTRRYFAGLLLLSGVLVLGIVQWSFLPILIQNGPVASTAALEMSAGHSSKFAAPFKGLFLFGDGLKPCLVESRSTLRRIVSRIPHPPEAQFTGKDNFFLSYHPLRAPPSA
Ga0210407_106288131	3300020579	Soil	MNPTPFTTRRYVVFLLLLSGVLVLGIVQWSFLPILIQNGPVGTSAVLEMSAGHSSKFAAPFKCLFGGGLKPCLVQSRITVRRIASRIPHPPEAQFSGADVFFLSYHPLRAPPSA
Ga0210403_101356982	3300020580	Soil	MNPKRIPSRRYVASLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPYKCLFGDGLKPCLTQTRINVRRTASRIPHPPEETISGKDEFFLSYHPLRAPPSA
Ga0210403_105923241	3300020580	Soil	MNPKHTSSRRYLACLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAVLEMSAGHSSKFAAPFKCLFGDGLKPCLVQSKITVRRVASRIPHPPETQFSG
Ga0210399_100855084	3300020581	Soil	MNPKHTSSRRYLACLVLLTGVLVLGIVQWSFLPILIQNGPVGTAAVLEMSAGHSSKFAAPFKCLFGDGLKPCLVQSKITVRRVASRIPHPPEAQFSGNDVFFLSYHPLRAPPSA
Ga0210399_103029082	3300020581	Soil	MNPKRSPNRGYGVCLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLEMSAGHSSKFAAPFKCLFGDGLNPCLVQSRITVRRVAYRISLLPEALVSGKDDFFLSCHPLRAPPSA
Ga0210399_107114112	3300020581	Soil	MNPKRSTSRRYLACLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAVLEMSAGHSSKFAAPFKCLFGDGLKPCLVQSRNTVRRIAYRIPHATEAQFSGNDVFFLSYHPLRAPPSS
Ga0210399_107933141	3300020581	Soil	MNPTPFTTRRYVVFLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEVSAGHSSKFVAPFKCLFGDGLRPCLVQSRITVQRIATKIPHPPEAPISGQNDFFLSYHPLRAPPSS
Ga0210399_109080172	3300020581	Soil	MNPERIPSRRYVALLLLFSGVLVLGIVQWSFLPILIQNGPVGSAAVLEISAGHSSKFVAPFKCLFGDGLRPCLLQWRITVRRIASRIPHPPEAQFSATDFFFLSYHPLRAPPSA
Ga0210401_1000026166	3300020583	Soil	MNPKRIPSRRYVAVLLLLSGVLVLGIVQWSFLPLLIQNGPVGSAAILEMSASHTSKFAAPFKCLFGDGLNPCLMQSRITVRRVASRIVRLPDAPISGQDDFSLTHHPLRAPPSA
Ga0210406_113286521	3300021168	Soil	SPDSRRPQMNPNRIPTRRYIAFLILLSGVLVLGIVQWSFLPILIQNGPVGRAAVLEMSAGHSSKFAAPFKCLFGDGLKPCLVQSRITVRRIAFRMPHPPESKFSGRDDLFLSYNPLRAPPYA
Ga0210405_102120342	3300021171	Soil	MNPKRSTSRGYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRAASRIPHPPEAPISGKDEFFLSYHPLRAPPSA
Ga0210405_107917361	3300021171	Soil	MNPERTPSSRYVACILLLSGILVLGIIQWSFLPLLIQDGPLTSATVLEMSASHTSKFAAPFKCLFGDGLNPCLAQSRITVRRMASRMVRLPDAPISGQDDISLTHRPLRAPPSA
Ga0210408_102796842	3300021178	Soil	MNPKRTPTRCYVTGLLLLSGILVLGIVQWSFLPILIQNGPIASTSILEMSAGHSSKFAAPFKCLFGDGLNTCLLQLRSTVRRIASRIVRLPDGPISGKDVFFLSYHPLRAPPSA
Ga0210396_100622023	3300021180	Soil	MNPKHSTSRRNATCLLLLSAVLILGIVQWSFLPILIQNGPVGSAGVLEMSTGHSSKFAAPFKCLFGDGLNPCLVQTRITVRRVVSRIVRLPEAPTSGQDDFSLTHRPLRAPPSA
Ga0210388_100152113	3300021181	Soil	MNPKHSTSRRNATCLLLLSAVLILGIVQWSFLPILIQNGPVGSSGVLEMSTGHSSKFAAPFKCLFGDGLNPCLVQTRITVRRVVSRIVRLPEAPTSGQDDFSLTHRPLRAPPSA
Ga0210388_102237402	3300021181	Soil	MNPERPTNRRTVACLLLLSGILFLGIVQWSFLPILIQNGPVANSAALEISASHSSKFAAPFKCLFGDALRPCLVLSGLTVPRIARRILYRAATPLFDNDEFFLSYHPLRAPPSA
Ga0210385_109317942	3300021402	Soil	AALALLSAILFLGIVQWSFLPILIQNGPVGNAAVLEMTAGHSAKFAAPFKGLFSEGLNPCLVPTRITVRRFVSGVVRLPDAPVSGQDDFSLTHRPLRAPPSA
Ga0210397_102192452	3300021403	Soil	AEAQMNPKRSTSRGYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRAASRIPHPPEAPISGKDEFFLSYHPLRAPPSA
Ga0210383_111387101	3300021407	Soil	MNPNRTPNRRFAICLLLLAGVLVLGIIQWSFLPILIQNGPVGGSVLEMSAGHSSKFAAPFKCLFGDGLKPCLAQTRITVRTFANRIPHTQELPVFSTDEFFLSYHPLRAPPSA
Ga0210394_100287803	3300021420	Soil	MNSLPTSSRTSTAALALLSAILFLGIVQWSFLPILIQNGPVGNAAVLEMTAGHSAKFAAPFKGLFSEGLNPCLVPTRITVRRFVSGVVRLPDAPVSGQDDFSLTHRPLRAPPSA
Ga0210394_101942063	3300021420	Soil	MNPKHTSSRRYLACLVLLSGVLVLGIVQWSFLPILIQNGPVGTAAVLEMSAGHSSKFAAPFKCLFGDGLKPCLVQSKITVRRVASRIPHPPEAQFSGNDVFFLSYHPLRAPPSA
Ga0210394_104011562	3300021420	Soil	MNPERTPSRRYVVCLLLLTGVLVLGILQWSILPILNQNGPGTSTAVLGVSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRVPDDPISGQDDFSLTHRPLRAPPSAS
Ga0210394_110546431	3300021420	Soil	MSLMRSPSRGYVACLVLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFGDGLRPCLAQSRITVRRIVTRIPHPPAAPISGQDEFFLSYHPLRAPPAAISV
Ga0210394_111887451	3300021420	Soil	PNRGYGVCLLLLSGVLVLGIVQWSFLPILIQNGPVGSAATLEMSAGHSSKFAAPFKCLFGDGLNPCLVQSRITVRRVAYRISLLPEALVSGKDDFFLSCHPLRAPPSA
Ga0210384_101015171	3300021432	Soil	TPFTTRRYVVFLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEVSAGHSSKFVAPFKCLFGDGLRPCLVQSRITVQRIASKIPHPPEAPISGQNDFFLSFHPLRAPPSS
Ga0210384_115321481	3300021432	Soil	MNPTPFTTRRYVVFLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEVSAGHSSKFVAPFKCLFGDGLRPCLVQSRITVQRIASKIPHPPEAPISGQ
Ga0210391_100694041	3300021433	Soil	MNSLPTSSRTSAAALALLSAILFLGIVQWSFLPILIQNGPVGNAAVLEMTAGHSAKFAAPFKGLFSEGLNLCLVPTRITVRRFVSGVVRLPDAPVSGQDDFSLTHRPLRAPPSA
Ga0210402_106560701	3300021478	Soil	SGVLVLGIVQWSFLPILIQNGPVGSSVALEMSAGHSSKFAAPFKCLFGDGLKPCLAQTRVPTVRTVLRIPHSAQDQIPGNDDFYLSYHPLRAPPSA
Ga0210410_102034892	3300021479	Soil	MTSNRSTSRRYLACLLLSGVLVLGIVQWSFLPLLIQNGPVGNAAVLEVSAGHSSKFAAPFKCLFGDGLRPCLLQARITIRKVATRITNPLEDSFSGKDEFFLAYHPLRAPPSA
Ga0210409_1000241010	3300021559	Soil	MSSKRSPSRRYVTCLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFGDGLRPCLAQSRITVRRIVTRIPHPPAAPISGQDEFFLSYHPLRAPPSA
Ga0242654_103163292	3300022726	Soil	MNPNRIPTRRYIAFLILLSGVLVLGIVQWSFLPILIQNGPVGRAAVLEMSAGHSSKFAAPFKCLFGDGLKPCLVQSRITVRRIAFRMPHPPESKFSGRDDLFLSYNPLRAPPYA
Ga0247664_10835331	3300024232	Soil	MNPKPSQTRRYVACLLLLSGVLILGIVQWSFLPILMQNGPAANTAVLELSAGHSSKFAAPFKFLFGDWLRPCLLQSRITVRRFAFRIPYPPDVPISGKDDFFLSDHPLRAPPSA
Ga0207687_100939263	3300025927	Miscanthus Rhizosphere	MNPTRPTNRDYLALLLLLSGVLVLGIVQWSFLPILIQNGAVGNSAVLEMSGGHSSKFAAPFKCLFGNGLKPFVVRSRISVPAVSSRMLEPADIPTFWNEPFFLSNYPLRAPPSA
Ga0207700_118311511	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MFPQRVTTRRYIVCLMALSAVLVLGIVQWSFLPILIQNGPIGTSGMLEISGHSSKFAAPFKCLYGDGLRPCVVQSRITVRRIVFRIPLPPEAEISGKQEAFLSWLPLRAPPST
Ga0209009_11444181	3300027667	Forest Soil	MNPKRSTSRGYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRAASRIPHPPEAPISGKDEFFLSYYPLRAPPSA
Ga0209656_101909832	3300027812	Bog Forest Soil	MNLNRPSNRLCVAALILLSGVLILGIVQWSFLPILIQNGPVGSASVLEMSAGHSSKFAAPFKCLFDDGLRPCLVQTRIIIRSVAVRMPHPAETPLFGKDEFFLSYHPLRAPPSA
Ga0209580_102387062	3300027842	Surface Soil	MNPERTPSRRYIVCLHLLLGVLVLGIVQWSFLPILIQNGPGTSAGVLGVSASHTSKFAAPFKCLFGDGLNPCLVQTRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSA
Ga0209068_100152032	3300027894	Watersheds	MNPQRTPSRRFAACLLLLACVLVLGIVQWSFLPILIQNGPSTNATVQDLSASHSSKFAAPFKFLFGDRLNPCIAPSRITLQRVASAFVRLPDAPISMQYDFSLTQPPLRAPPSAS
Ga0209006_100489322	3300027908	Forest Soil	LVFGIIQWSFLPILIQNGPVASTAELEMSAGHSSKFAAPFKCLFGDGLIPCLAQSRITVRRTATRITHLPEAQSSDDDDFFLSYHPLRAPPSA
Ga0209006_102864532	3300027908	Forest Soil	MNPERTPTRRYVVCLLLLSGVLALGIVQWSFLPILIQNGPVGNAPALEMSVGHSSKFAAPFKCLFADGARPCLVQSRITVRRVAFRIPHPLEAHFPGRNDFFLTYHPLRAPPSA
Ga0209006_107398212	3300027908	Forest Soil	LSVVLCLGIVQWSFLPLLIQSAPATSAATLEDSTGHTSKFAAPFKCLFGDGLGPYLVQSRITVRRIASRVIHPPEAPISGKDVFFLSYYPLRAPPSA
Ga0209168_1000203310	3300027986	Surface Soil	MNSMTNSKRTLSRRTILCLCLLSGVLVLGIIQWSFLPILIQNGPIGSSGMLEISGHSSKFAAPFKCLFSDGLRPCLVQSRITVRRIAFRIPHTPEAETYGKREVFLTYQPLRAPPSA
Ga0316363_104108561	3300030659	Peatlands Soil	RYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAALEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRIASRIPHPPEAPISGKDEFFLSYHPLRAPPSA
Ga0307482_13171152	3300030730	Hardwood Forest Soil	MNPNRVPTRRYIGFLILLLGVLILGIVQWSFLPILMQNGAVGSAAVLEISAGHSSKFAAPFKCLFGDGLRPCLVLSRITVRRIAFRMPHPPESKLSGRDDLFLSYNPLRAPPSA
Ga0265461_129848601	3300030743	Soil	RSTSRRYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGRAAVLEMSAGHSSKFAAPFKCMFGDGLRPCLVQSRITVQSVASRIPHAPEAQFSGNDVFFLSYHPLRAPPSA
Ga0170834_1078415131	3300031057	Forest Soil	MNPKRIPTRPYVAGLLLLSGVLVLGIVQWSFLPILIQNGPIASTSILEMSAGHSSKFAAPFKCLFGDGLNPCLVQSRITVRGIASRIVRLPDDPISGQDDFFLSYHRLRAPPSA
Ga0265760_100153571	3300031090	Soil	MNPERTPTRRFVICLLLLSGVLVLGIIQWSFLPILIQNGPVASTGVLEMSAGHSSKFAAPSKCLFGDGLRPCLVQSRITLRGIATRIPHPPEAPFSGGHDFFLSYHPLRAPPSA
Ga0265760_101906121	3300031090	Soil	PKRSTSRGYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRAASRIPHPPEAPISGKDEFFLSYHPLRAPPSA
Ga0170823_176162291	3300031128	Forest Soil	MNPKPTPSRWYIACLLILSGVLALGIIQWSFLPILIQNGPVGSSGILEMSAGHSSKFAAPFKCLFGDGLAPCLVQSRITARRAAFGILHPPKTQSSGRDEVFLSCHPLRAPPSE
Ga0170824_1284453821	3300031231	Forest Soil	MNQKYSTDRRYLACLLLLSGVLVLGIVQWSFLPILIQNGPIGSSAALEMSAGHSSKFAAPFKCLFGDGQRPCLAQTRIAIRRITSSISLPPETALPGHDDFFLSYHPLRAPPSA
Ga0302325_110322302	3300031234	Palsa	MNPTRTPSRRYLAQLLLLSGVLVLGIVQWSFLPILIQNGPVASTAVLEMSAGHSSKFAAPLKCLFSDGLRPGLMPSRIIVRRMASRIPHRSEVPISGNDDFFFSYHPLRAPPSA
Ga0302325_112772591	3300031234	Palsa	MNLMRTPSRRYIASLIALSAVLVLGIVQWSFLPILIQNGPVGSSAVLEMSAGHSSKFAAPFKCLFGDGLGPCLVQSRITVRRIASRVPHPPEAPIFGRNEYFLSYYPLRAPPSA
Ga0302326_106077893	3300031525	Palsa	MNPTRTPSRRYIASLIALSAVLVLGIVQWSFLPILIQNGPVGSSAVLEMSAGHSSKFAAPFKCLFGDGLGPCLVQSRITVRRIASRVPHPPEAPIFGRNEYFLSYYPLRAPPSA
Ga0310686_1075275651	3300031708	Soil	MKPNSSPSRRYLVCLLLLSGVLVLGIIQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFGDGLRPCLAQSRITVHRPAFRIPYTPEAPIYSQDDFSLSYHPLRAPPSA
Ga0310686_1118416904	3300031708	Soil	MNPKRSTSRGYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPYKCLFGDGLRPCLVQSRITVRRAASRIPHPPEAPISGKDEFFLSYHPLRAPPSA
Ga0310686_1124980223	3300031708	Soil	MNPNRSTSRRYVACLLLLSGVLVLGIIQVSFLPILIQNGPVGSAAVLEMSAGHSSKFAAPFKCLFSDGLRPCLLQSRITLRRSAYRIPHPPDAPISGKDEYFLSFHPLRAPPST
Ga0310686_1185097403	3300031708	Soil	MNSKRSPSRQYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGSTAVLELSAGHTSKFAAPFKCLFGDGLNPCPVQSRITVRRIASRIVRLPEAPISGQDDFSLTHRPLRAPPSA
Ga0307476_108478331	3300031715	Hardwood Forest Soil	RCVMCLLLLSGVLVLGIIQWSFLPILIQNGPVGSAAVLEISAGHSSKFAAPFKCLFGDGSIPCLVHSGITERRIASSIVRLPDFQIPGTDDFFLSYHPLRAPPSS
Ga0307478_101943971	3300031823	Hardwood Forest Soil	MNPKPTPSRWYIACLLILSGVLALGIIQWSFLPILIQNGPVGSSGILEMSAGHSSKFAAPFKCLFGDGLAPCLVQSRITARRAAFGILHPPKTQSSGRDEVFI
Ga0307479_100132583	3300031962	Hardwood Forest Soil	MNLKRTPTRSCVVGLLLLSGVLVLGIVQWSFLPILIQNGPIASTSILEMSAGHSSKFAAPFKFLFGDGLNTCLLQLRITVRRIASRIVRLPDDPISGKDDFFLSYHPLRAPPSA
Ga0307479_100135444	3300031962	Hardwood Forest Soil	MNPKRIPSRRYVAVLLLLSGVLVLGIVQWSFLPLLIQNGPVGSAAILEMSSSHTSKFAAPFKCLFGDGLNPCLMQSRITVRRVASRIVRLPDAPISGQDDFSLTHHPLRAPPSA
Ga0311301_1000248011	3300032160	Peatlands Soil	MNPKRSTSRRYVACLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAALEMSAGHSSKFAAPFKCLFGDGLRPCLVQSRITVRRIASRIPHPPEAPISGKDEFFLSYHPLRAPPSA
Ga0311301_100693924	3300032160	Peatlands Soil	MNPKRTPSRPYVACLLLLSGVLVLGIIQWSILPILIENGPGTGTAVLGVSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPDAPISGQDDFSLTHRPLRAPPSAS
Ga0311301_106052082	3300032160	Peatlands Soil	MNPKRTPSRRFLACLLLLSGVLVLGIIQWSFLPILIQNGPGTSTAVLELSASHTSKFAAPFKCLFGDGLNPCLVQSRITVRRIASRIVRLPEAPISGQDDFSLTHRPLRAPPSA
Ga0348332_117616731	3300032515	Plant Litter	MNPKRTPSRRYLACLLLLSGVLVLGIVQWSFLPILIQNGPVGTAAVLEMSAGHSSKFAAPFKCLFGDGLKPCLVQSRITVQRVASRTPYAPETQFSGSDVFFLSHHPLRAPPSA
Ga0316624_100302374	3300033486	Soil	MNPKHSTSRRYIACLLLLSGVLVLGIIQWSFLPILVQNGLVASTVVLDLSARHTSKFVAPFKCLFGDDLRPCPVQSRITLRRIVSKFVRLPEAPVSGQDDFSLCYRPMRAPPTA
Ga0370492_0054129_579_923	3300034282	Untreated Peat Soil	MIPMRTPSRRSIVSLGALSAVLVLGIVQWSFLPILIQNGPVGSSAILEMSAGHSSKFAAPFKCLFGDGLGPCLVQSRITVRRIAFRVPRPPEVPMPGKDELFLSYYPLRAPPTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056028

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences