Metagenome / Metatranscriptome Family F056008

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056008
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	73 residues
Representative Sequence	VSYDTIGVFAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNFQGFTYSADLKRTGDSASAK
Number of Associated Samples	105
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.93 %
% of genes near scaffold ends (potentially truncated)	63.77 %
% of genes from short scaffolds (< 2000 bps)	84.06 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.565 % of family members)
Environment Ontology (ENVO)	Unclassified (34.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.478 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 36.63% Coil/Unstructured: 63.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00027	cNMP_binding	5.80
PF01734	Patatin	4.35
PF02782	FGGY_C	3.62
PF13387	DUF4105	2.17
PF00230	MIP	1.45
PF12850	Metallophos_2	1.45
PF13676	TIR_2	1.45
PF01594	AI-2E_transport	0.72
PF00126	HTH_1	0.72
PF14219	DUF4328	0.72
PF11964	SpoIIAA-like	0.72
PF02321	OEP	0.72
PF13533	Biotin_lipoyl_2	0.72
PF12697	Abhydrolase_6	0.72
PF07690	MFS_1	0.72
PF04366	Ysc84	0.72
PF00483	NTP_transferase	0.72
PF13193	AMP-binding_C	0.72
PF00723	Glyco_hydro_15	0.72
PF01258	zf-dskA_traR	0.72
PF00939	Na_sulph_symp	0.72
PF00128	Alpha-amylase	0.72
PF07080	DUF1348	0.72
PF12728	HTH_17	0.72
PF16363	GDP_Man_Dehyd	0.72
PF13180	PDZ_2	0.72
PF00440	TetR_N	0.72
PF03062	MBOAT	0.72
PF00873	ACR_tran	0.72
PF13561	adh_short_C2	0.72
PF02585	PIG-L	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	4.35
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	4.35
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	4.35
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.45
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.45
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.72
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	0.72
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.72
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.72
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.72
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.72
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.72
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.72
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.72
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.72
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.72
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.55 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.94 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	13.04 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	10.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.62 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.45 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.45 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	10.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.62 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.45 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1.45 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	10.14 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	5.80 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1.45 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.45 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	0.72 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	10.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.07 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	1.45 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1.45 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	1.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.45 %
Deltaproteobacteria bacterium RIFOXYA2_FULL_55_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA2_FULL_55_11	0.72 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.72 %
Labrenzia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Labrenzia	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	10.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.07 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.45 %
Bradyrhizobium barranii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii	0.72 %
Paraburkholderia domus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia domus	0.72 %
unclassified Labrenzia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Labrenzia → unclassified Labrenzia	0.72 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	0.72 %
Paraburkholderia hospita	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia hospita	0.72 %
Deltaproteobacteria bacterium RIFOXYA2_FULL_55_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA2_FULL_55_11	0.72 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	10.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.07 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.45 %
Labrenzia sp. VG12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Labrenzia → unclassified Labrenzia → Labrenzia sp. VG12	0.72 %
Bradyrhizobium barranii subsp. barranii	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	0.72 %
Paraburkholderia domus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia domus	0.72 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	0.72 %
Paraburkholderia hospita	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia hospita	0.72 %
Deltaproteobacteria bacterium RIFOXYA2_FULL_55_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA2_FULL_55_11	0.72 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1212281	Not Available	578	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10643078	Not Available	540	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1018348	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1023735	Not Available	668	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1046834	Not Available	567	Open in IMG/M
3300003152\|Ga0052254_1103158	Not Available	514	Open in IMG/M
3300003987\|Ga0055471_10154274	Not Available	702	Open in IMG/M
3300004463\|Ga0063356_100344891	Not Available	1878	Open in IMG/M
3300004479\|Ga0062595_101712245	Not Available	592	Open in IMG/M
3300004480\|Ga0062592_102083948	Not Available	562	Open in IMG/M
3300005185\|Ga0066811_1025199	Not Available	531	Open in IMG/M
3300005294\|Ga0065705_10333418	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005332\|Ga0066388_102238621	Not Available	987	Open in IMG/M
3300005332\|Ga0066388_102249075	All Organisms → cellular organisms → Bacteria → Terrabacteria group	985	Open in IMG/M
3300005332\|Ga0066388_103325864	Not Available	821	Open in IMG/M
3300005332\|Ga0066388_104186840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	735	Open in IMG/M
3300005332\|Ga0066388_104525612	Not Available	708	Open in IMG/M
3300005332\|Ga0066388_107841562	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300005467\|Ga0070706_100020673	All Organisms → cellular organisms → Bacteria → Proteobacteria	6066	Open in IMG/M
3300005518\|Ga0070699_101374316	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA2_FULL_55_11	648	Open in IMG/M
3300005713\|Ga0066905_100897053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	775	Open in IMG/M
3300005713\|Ga0066905_101286182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	657	Open in IMG/M
3300005764\|Ga0066903_100279803	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300005764\|Ga0066903_107934321	Not Available	545	Open in IMG/M
3300005981\|Ga0081538_10055645	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300006049\|Ga0075417_10209453	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	925	Open in IMG/M
3300006049\|Ga0075417_10731454	Not Available	510	Open in IMG/M
3300006173\|Ga0070716_100082544	Not Available	1922	Open in IMG/M
3300006755\|Ga0079222_10002773	All Organisms → cellular organisms → Bacteria	5398	Open in IMG/M
3300006847\|Ga0075431_102232037	Not Available	502	Open in IMG/M
3300006853\|Ga0075420_101123947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300006894\|Ga0079215_10151783	Not Available	1107	Open in IMG/M
3300006904\|Ga0075424_100099626	All Organisms → cellular organisms → Bacteria	3061	Open in IMG/M
3300009081\|Ga0105098_10035670	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1973	Open in IMG/M
3300009100\|Ga0075418_11446113	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	746	Open in IMG/M
3300009147\|Ga0114129_11447532	Not Available	846	Open in IMG/M
3300009157\|Ga0105092_10032429	All Organisms → cellular organisms → Bacteria	2774	Open in IMG/M
3300009157\|Ga0105092_10156636	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300009157\|Ga0105092_10283134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia hospita	934	Open in IMG/M
3300009157\|Ga0105092_10327083	All Organisms → cellular organisms → Bacteria → Proteobacteria	867	Open in IMG/M
3300009157\|Ga0105092_10644633	Not Available	614	Open in IMG/M
3300009162\|Ga0075423_11364502	Not Available	758	Open in IMG/M
3300009168\|Ga0105104_10578197	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	638	Open in IMG/M
3300009168\|Ga0105104_10610623	Not Available	621	Open in IMG/M
3300009609\|Ga0105347_1001554	All Organisms → cellular organisms → Bacteria → Proteobacteria	9714	Open in IMG/M
3300009609\|Ga0105347_1001811	All Organisms → cellular organisms → Bacteria → Proteobacteria	8797	Open in IMG/M
3300009609\|Ga0105347_1295314	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300009792\|Ga0126374_10972051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300009820\|Ga0105085_1036514	Not Available	874	Open in IMG/M
3300010043\|Ga0126380_10808477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300010043\|Ga0126380_11438358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia domus	607	Open in IMG/M
3300010047\|Ga0126382_10999681	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300010047\|Ga0126382_11004393	Not Available	731	Open in IMG/M
3300010358\|Ga0126370_11077307	Not Available	739	Open in IMG/M
3300010358\|Ga0126370_11661830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300010360\|Ga0126372_10352623	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1320	Open in IMG/M
3300010360\|Ga0126372_13088962	Not Available	517	Open in IMG/M
3300010361\|Ga0126378_10167083	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	2255	Open in IMG/M
3300010361\|Ga0126378_11152536	Not Available	874	Open in IMG/M
3300010361\|Ga0126378_12467449	Not Available	594	Open in IMG/M
3300010362\|Ga0126377_11556330	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300010366\|Ga0126379_11545792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	769	Open in IMG/M
3300010366\|Ga0126379_13711996	Not Available	512	Open in IMG/M
3300010376\|Ga0126381_100119931	All Organisms → cellular organisms → Bacteria → PVC group	3402	Open in IMG/M
3300010398\|Ga0126383_10170591	Not Available	2055	Open in IMG/M
3300010403\|Ga0134123_10514956	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1129	Open in IMG/M
3300011398\|Ga0137348_1021010	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1023	Open in IMG/M
3300011405\|Ga0137340_1116463	Not Available	513	Open in IMG/M
3300011407\|Ga0137450_1110301	Not Available	539	Open in IMG/M
3300011420\|Ga0137314_1152485	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300011437\|Ga0137429_1260676	Not Available	536	Open in IMG/M
3300012160\|Ga0137349_1104721	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	527	Open in IMG/M
3300012175\|Ga0137321_1148120	Not Available	522	Open in IMG/M
3300012205\|Ga0137362_10107251	All Organisms → cellular organisms → Bacteria → Proteobacteria	2358	Open in IMG/M
3300012360\|Ga0137375_10721476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Labrenzia → unclassified Labrenzia → Labrenzia sp. VG12	811	Open in IMG/M
3300012923\|Ga0137359_11522036	Not Available	557	Open in IMG/M
3300012923\|Ga0137359_11555386	Not Available	549	Open in IMG/M
3300012948\|Ga0126375_10433282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	961	Open in IMG/M
3300012948\|Ga0126375_10651133	Not Available	813	Open in IMG/M
3300012948\|Ga0126375_10655537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300012955\|Ga0164298_10544923	Not Available	785	Open in IMG/M
3300012971\|Ga0126369_10008005	All Organisms → cellular organisms → Bacteria	7982	Open in IMG/M
3300012971\|Ga0126369_10603338	All Organisms → cellular organisms → Bacteria → Proteobacteria	1168	Open in IMG/M
3300012971\|Ga0126369_11699918	Not Available	720	Open in IMG/M
3300012971\|Ga0126369_11842758	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300014271\|Ga0075326_1019277	Not Available	1673	Open in IMG/M
3300014326\|Ga0157380_10745515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	990	Open in IMG/M
3300014864\|Ga0180068_1089435	Not Available	516	Open in IMG/M
3300014873\|Ga0180066_1024975	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300014875\|Ga0180083_1062194	All Organisms → cellular organisms → Bacteria → PVC group	782	Open in IMG/M
3300014882\|Ga0180069_1155943	Not Available	556	Open in IMG/M
3300014884\|Ga0180104_1240877	Not Available	539	Open in IMG/M
3300015245\|Ga0137409_10687265	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	857	Open in IMG/M
3300015254\|Ga0180089_1076146	Not Available	685	Open in IMG/M
3300015259\|Ga0180085_1201175	Not Available	594	Open in IMG/M
3300016445\|Ga0182038_10501048	Not Available	1036	Open in IMG/M
3300017939\|Ga0187775_10091960	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300018072\|Ga0184635_10061378	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300020063\|Ga0180118_1018579	Not Available	578	Open in IMG/M
3300021081\|Ga0210379_10103358	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1187	Open in IMG/M
3300021178\|Ga0210408_11103146	All Organisms → cellular organisms → Bacteria → Synergistetes	610	Open in IMG/M
3300021432\|Ga0210384_10834879	Not Available	820	Open in IMG/M
3300021560\|Ga0126371_10506151	Not Available	1356	Open in IMG/M
3300025792\|Ga0210143_1039762	Not Available	827	Open in IMG/M
3300025910\|Ga0207684_10228220	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1606	Open in IMG/M
3300025922\|Ga0207646_10579167	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1008	Open in IMG/M
3300026028\|Ga0208420_1018026	Not Available	611	Open in IMG/M
3300027252\|Ga0209973_1075829	Not Available	531	Open in IMG/M
3300027513\|Ga0208685_1012393	Not Available	2036	Open in IMG/M
3300027654\|Ga0209799_1010778	Not Available	1960	Open in IMG/M
3300027722\|Ga0209819_10095468	Not Available	1037	Open in IMG/M
3300027722\|Ga0209819_10334601	Not Available	518	Open in IMG/M
3300027725\|Ga0209178_1134040	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300027765\|Ga0209073_10261972	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300027873\|Ga0209814_10010264	All Organisms → cellular organisms → Bacteria	3672	Open in IMG/M
3300027874\|Ga0209465_10031070	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	2514	Open in IMG/M
3300027909\|Ga0209382_10311594	Not Available	1772	Open in IMG/M
3300031170\|Ga0307498_10305322	Not Available	597	Open in IMG/M
3300031538\|Ga0310888_10498905	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	728	Open in IMG/M
3300031720\|Ga0307469_10079911	Not Available	2210	Open in IMG/M
3300031740\|Ga0307468_102456833	Not Available	509	Open in IMG/M
3300031833\|Ga0310917_11068214	Not Available	540	Open in IMG/M
3300031854\|Ga0310904_10734783	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	685	Open in IMG/M
3300031890\|Ga0306925_11044153	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300031910\|Ga0306923_10193211	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300032174\|Ga0307470_10629328	Not Available	807	Open in IMG/M
3300032180\|Ga0307471_100544349	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1314	Open in IMG/M
3300032205\|Ga0307472_100705286	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	908	Open in IMG/M
3300032205\|Ga0307472_101940829	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300032828\|Ga0335080_10289368	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300034115\|Ga0364945_0194045	Not Available	618	Open in IMG/M
3300034148\|Ga0364927_0032968	Not Available	1293	Open in IMG/M
3300034151\|Ga0364935_0196919	Not Available	648	Open in IMG/M
3300034690\|Ga0364923_0003577	All Organisms → cellular organisms → Bacteria	3242	Open in IMG/M
3300034690\|Ga0364923_0147688	Not Available	612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.86%
Host-Associated	Host-Associated	10.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.22%
Aquatic	Environmental → Aquatic	24.64%
Plants	Host-Associated → Plants	10.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.59%
Sediment	Environmental → Aquatic → Sediment	13.77%
Freshwater	Environmental → Aquatic → Freshwater	9.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.97%
Floodplain	Environmental → Terrestrial → Floodplain	3.62%
Marine	Environmental → Aquatic → Marine	1.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.45%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.77%
Loam	Environmental → Terrestrial → Soil → Loam	13.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.97%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.45%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.72%
Sand	Environmental → Terrestrial → Soil → Sand	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.62%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	13.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.62%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.45%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.45%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.45%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.45%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026028	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_12122812	2228664022	Soil	VSYDVIDVFAEQGKLVLTDDKLSTKFQKGGQMTVQLYVDPASGERMLKAEGKNXQGFXYSADLKRTGDSASAK
ICChiseqgaiiFebDRAFT_106430782	3300000363	Soil	VSHSVSRVLSENGKLVLTDGKLSATGSKGGQMTLQLVEPGSGERVLKVNAKDSEGITYSADLKRTGESAPAK*
AF_2010_repII_A01DRAFT_10183482	3300000580	Forest Soil	VSYDTIGVFAEKGKSVLTDGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNFQGFTYSADLKRTGDSASAK*
KanNP_Total_noBrdU_T14TCDRAFT_10237352	3300000596	Soil	AEQGKLVLTDXKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNGQGFIYSADLKRTGDSASAK*
AP72_2010_repI_A10DRAFT_10468342	3300000651	Forest Soil	AEKGKLVLTDGKLSTKFEKGGQVTVQLYVDPASGERMLKAEGKNSQGFTYSADLKRTGDYASAQ*
Ga0052254_11031582	3300003152	Sediment	GTSVSYQVIRVLDEKGKLVLTDGKLSAKFEKGGQATLQLYVDPESGERILKADSRDYEGSTYSAELKRTGDAAPAK*
Ga0055471_101542741	3300003987	Natural And Restored Wetlands	VSYSVIRVFAEKGKFVLTDGKLSATGEKGGQATLQLYVDPGSSERILKADAKDSEGFTYSADLKRIGGSISAK*
Ga0063356_1003448912	3300004463	Arabidopsis Thaliana Rhizosphere	SENGKLVLTDGKLSATGSKGGQMTLQLVEPGSGERVLKVNAKDSEGITYSADLKRTGESAPAK*
Ga0062595_1017122451	3300004479	Soil	QGGSVSSSVIGVFAEKGKLVLTDGKLSAKGAKGGQATLQLYVEPGSSERMLKVDAKDSEGFTYSAELKRTGDFASAK*
Ga0062592_1020839481	3300004480	Soil	SVIRVLDEKGKLVLTDGKLSAKFEKGGQATLQLYVDPESGERILKADSRDYEGVIYSAELKRTGNSASAK*
Ga0066811_10251991	3300005185	Soil	RTTAAGGQVSYSVIRVLDEKGKLVLTDGKLSAKFEKGGQATLQLYVDPESGERILKADSRDYEGVTYSAELKRTGNSASAK*
Ga0065705_103334181	3300005294	Switchgrass Rhizosphere	VIGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERILKSDARDFQGFTYSAELKRTGESASAK*
Ga0066388_1022386213	3300005332	Tropical Forest Soil	VFAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPASRERMLKAEGKNFQGFTYSADLERTGDYASVK*
Ga0066388_1022490751	3300005332	Tropical Forest Soil	DVIDVFAEKGKLVLTDGKLSTKFEKGGQVTAQLYVDPASGDRMLKAEGKSSQGFTYSADLERTGDYASAK*
Ga0066388_1033258641	3300005332	Tropical Forest Soil	SYDPIDVFGKGKLVLTDGKLSTKFEKGGQVTAQLYVDPASSERMLKAEGKSSQGFTYSANLKRTGDFASAK*
Ga0066388_1041868401	3300005332	Tropical Forest Soil	VFAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPASGERMLKADGKNSQGFMYSADLKRTGDSVAAK*
Ga0066388_1045256122	3300005332	Tropical Forest Soil	MIGVFAGTGKLTLTDGKLSAKSENGGQMTLQPYVDRGSSDRMLKVDARDSGGFTYSAELKRTGDSGTAK*
Ga0066388_1078415623	3300005332	Tropical Forest Soil	SYDPIDVFGKGKLVLTDGKLSTKFEKGGQVTAQLYVDPASGERMLKAEGKNFQGFSYSADLKRTGES*
Ga0070706_1000206732	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRTRTTASGTSVSYQVTGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPESGERILKADSRDYEGFTYSAELKRTGESASAK*
Ga0070699_1013743162	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MCSAEQGRLVLTDGKLSTKFEKGGQLTVQLYVDPASGERMLKAEGKNSQGFTYSADLKRTGDSACAK*
Ga0066905_1008970532	3300005713	Tropical Forest Soil	MSVSYDVIDVFAEKGKLVLTDGKLSTKFEKGGYATVQLYVDPASGDRMLKVEGKNFQGFTYSADLKRTGDSASAKS*
Ga0066905_1012861821	3300005713	Tropical Forest Soil	ITRTTTKVSGMSVSYDTIGVFDEKGKLVLTDGKLSTKFEKGGHVTVQLYVDPASGERMLKAEGKNFQGFTYSADLKRTGDSASAK*
Ga0066903_1002798031	3300005764	Tropical Forest Soil	LVLTDGKLSTKFEKGGQVTVQLYVDPASGERVLKADGKNSQGFTYSADLTRTGDASSAK*
Ga0066903_1003580201	3300005764	Tropical Forest Soil	KLVLTDGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNSQGFTYTTDLKRTGDSGSAR
Ga0066903_1079343211	3300005764	Tropical Forest Soil	KMPVHYDTVDVFAEKAQLVLTGDKLSARFEKGGRMTVQLYVDPASGERLLKAEGKNSQGFTYSADLKRTGDSLSAK*
Ga0081538_100556452	3300005981	Tabebuia Heterophylla Rhizosphere	MSVSYDVMDVFAEKGKLVLTDGKLSTKFEKGGQVTAQLYVDPASRERMLKAEGKSSQGFTYSADLKRTGDSASAK*
Ga0075417_102094531	3300006049	Populus Rhizosphere	VSNSVVRVLSENGKLALTDGKLSTTGSKGGQMTLQLYVDPGSSERMLKVDAKDSEGITYSAELKRTGESASVK*
Ga0075417_107314541	3300006049	Populus Rhizosphere	SVIGVFAEKGKLVLTDGKLSAKGAKGGQATLQLYVDPGSSERILKADAKDSEGFTYSAELKRTGDSASAK*
Ga0070716_1000825441	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPESGERILKADSRDYEGFTYSAELKRTGESASAK*
Ga0079222_100027736	3300006755	Agricultural Soil	MPVHYDAIHVFAEKTQLVLTDNKLSAIFEKGGHMSAQLYVDPATSERMIRAEGKSSGGFTYSADLKRIGDSASAK*
Ga0075431_1022320372	3300006847	Populus Rhizosphere	SSSVIGVFAEKGKLVLTDGKLSARGEKGGQATLQLYVDPESSERILKSDARDFQGFTYSAELKRTGDSASAK*
Ga0075420_1011239472	3300006853	Populus Rhizosphere	YEFVSYRTIGEFAGKGKLVLTDGKLSAKSDKGGQMTLQLYVDSATGERMLKADAKDGKGLTYSADLKRTGDPVSAK*
Ga0079215_101517831	3300006894	Agricultural Soil	LVLTDDKLSAKFEKGGHMTAQLYVDQASGERMLKAQGKNSKGFSYSADLKRTGDSASAK*
Ga0075424_1000996261	3300006904	Populus Rhizosphere	SVIGVFAEKGKLVLTDGKLSAKGEKGGKATLQLYVDPGSSERMLKSDARDFQGFTYSAELKRTGESASAK*
Ga0105098_100356702	3300009081	Freshwater Sediment	MFAEKGKLVLTDGKLSAKGAKGGQATLQLYGDLGSSERMLKVDAKDSEGFIYSAELKRTGDVAFAK*
Ga0075418_114461131	3300009100	Populus Rhizosphere	VSYSVIGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVEPGSSERMLKADAKDSEGFIYSAELKRTRDVAFAK*
Ga0114129_114475323	3300009147	Populus Rhizosphere	GSVSSSVIGVFAEKGKLVLTDGKLSARGEKGGQATLQLYVDPESSERILKSDARDFQGFTYSAELKRTGDSASAK*
Ga0105092_100324291	3300009157	Freshwater Sediment	MPVSYHTFDVFAEKAQLVLTDDKLSARFEKGGRMTAQLYADPASSERMLKAEGKNSQGFTYSANLKRTGDSGPAK*
Ga0105092_101566362	3300009157	Freshwater Sediment	MSVSYGVTDVFAEKGKLVLTDGKLSTKFEKGGQMTAHLYVDPASGERMLQAEGKNSQGFTYSANLKRTGDSISAK*
Ga0105092_102831341	3300009157	Freshwater Sediment	MRTRATAQGGSVSHSVIGVFAEKGNLVLADGKLNAKGAKGGQATLQLYVEPGSSERMLKVDAKDSEGFTYSAELKRTGD
Ga0105092_103270832	3300009157	Freshwater Sediment	LVLTDGKLSTKFEKGGQVTVQLYVDPASGERMLKADGKNSQGFTYSANLKRTGDSASAK*
Ga0105092_106446332	3300009157	Freshwater Sediment	VSYSVIGVFAEKGKLVLTDGKLSAKGAKGGQATLQLYEDPGSSERMLKVDAKDSEGFTYSAELKRTGDSASAK*
Ga0075423_113645021	3300009162	Populus Rhizosphere	VIGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERILKSDARDFQGFTYSAELKRTGDSASAK*
Ga0105104_105781971	3300009168	Freshwater Sediment	VFAEKGKLVLTYGKLSAKGAKGGQATLQLYVEPGSSERMLKVDAKDSEGFTYSAELKRTGDFAAAK*
Ga0105104_106106231	3300009168	Freshwater Sediment	TRTRTKAQGTLVSYDVIDVFAEKVKLVLTDGKLSTKFEKGGQVTVQLYVDPAISERMLKAEGKNSQGFTYSANLKRTGDSISAK*
Ga0105347_10015544	3300009609	Soil	VSYSVIRVLDEKGKLVLTDGKLSAKFEKGGQVTLQLYVDPESGARILKAHSRDYEGVTYSADLKRTGDSASAK*
Ga0105347_10018117	3300009609	Soil	HTFDVFAEKAQLVLTDDKLSARFEKGGRMTAQLYVDPASSERMLKAEGKNSQAFTYSANLKRTGDLISAK*
Ga0105347_12953142	3300009609	Soil	HTFDVFAEKAQLVLTDDKLSARFEKGGRMTAQLYVDPASSERMLKAEGKNSQEFTYSANLKRTGDSISAK*
Ga0126374_109720512	3300009792	Tropical Forest Soil	DVFAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPASGERIPKAEGKNSQGFTYSADLKRTGDYASAK*
Ga0105085_10365142	3300009820	Groundwater Sand	GEAGAYEFASYRMIGVFAGKGKLVLTDGKLSAKSDKGGQMTLQLFADSGSPERMISYEAKDSEGLYY*
Ga0126380_108084772	3300010043	Tropical Forest Soil	EKGKLVLTDGKLSTKFEKGGQVTAQLYVDPASGERMLKAEGKNYQGFTYSADLKRTGDYASAK*
Ga0126380_114383582	3300010043	Tropical Forest Soil	VSYDTIGVFAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNFQGFTYSADLKRTGDSASAK*
Ga0126384_108690672	3300010046	Tropical Forest Soil	IGDTGTYEFTSYRMIGVFAGKGMLALTDGKLSAKSEKGGQMTLQLYVDPGSNERMLKADGKDSGGFTYSADLKRTGDYASAK*
Ga0126382_109996811	3300010047	Tropical Forest Soil	VFAEKGKLVLTDGKLSTKFEKGGHVTVQLYVDPASGDRMLKAEGKNSQGFTYSADLKRTGDSASAK*
Ga0126382_110043931	3300010047	Tropical Forest Soil	SGMSVSYDTIGVFAEKGKLVLTDGKLSTKFEKGGHVTVQLYVDPASGERMLKAEGKNFQGFTYSADLKRTGDSASAKS*
Ga0126370_110773071	3300010358	Tropical Forest Soil	RTITKVSGMSVSYDTIGVFDEKGKLVLTDGKLSTKFDKGGQMTAQLYMDPASGERMLKAEGKNFQGFTYSADLKRTGDSASAK*
Ga0126370_116618301	3300010358	Tropical Forest Soil	AEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPGSGERMLKAEGKNYQGFTYSADLKRTGDYASAK*
Ga0126372_103526232	3300010360	Tropical Forest Soil	MSVSYDTIDVFAEKGKLVLTDGKLSTKFEKGGQVTVQLYVDPASGERMLKAEGKNSQGFTYSADLKRTGDYASAK*
Ga0126372_112441601	3300010360	Tropical Forest Soil	VLTDGKLSTKFEKGGQMTAQLYVDPASRERMLKAEGKNFQGFTYSADLERTGDYASVK*
Ga0126372_130889621	3300010360	Tropical Forest Soil	FAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPASGERVLKADGKNSEGFIYSADLKRTGDSGLAR*
Ga0126378_101670831	3300010361	Tropical Forest Soil	SVSYDTISVFAEKGKVVLTDGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNFQGFTYSADLKRTGDSASAK*
Ga0126378_111525363	3300010361	Tropical Forest Soil	VISVFAEKGQLVLADGKLSTKFEKGGQMTAQLYVVPASGERMLKAEGKNSQGFTYSADLERTGDSGSAK*
Ga0126378_124674492	3300010361	Tropical Forest Soil	RSYRMIGVFAGKGKLTLTDGKLSAKSENGGQMTLQPYVDRGSSDRMLKVDARDSGGFTYSAELKRTGDSGTAK*
Ga0126377_115563302	3300010362	Tropical Forest Soil	MTPIGVFAEKGKLVLTDGKLSTKFEKGGHVTAQLYVDPASGERMLKAEGKNFQGFSYSADLKRTGES*
Ga0126379_115457921	3300010366	Tropical Forest Soil	MSVSYDVIDVFAEKGKLVLTDGKLSTKFEKGGQVTAQLYVDPASGERMLKAEGKNYQGFTYSADLKRTGDYASAK*
Ga0126379_137119961	3300010366	Tropical Forest Soil	DVFAEKGKLVLTDGKLSTKFEKGGQVTVQLYVDPASGERVLKADGKNSQGFTYSADLTRTGDASSAK*
Ga0126381_1001199314	3300010376	Tropical Forest Soil	VSVSYDTIGVFAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNFQGFTYSADLKRTGDSASAK*
Ga0126383_101705912	3300010398	Tropical Forest Soil	MSVSYDVIDVFAEKGKLVLTDGKLSTKFEKGGQVTAQLYVDPASGDRMLKAEGKSSQGFTYSADLERTGDYASAK*
Ga0134123_105149561	3300010403	Terrestrial Soil	VSYSVIGVFAEKGKLVLSDAKLSAKGAKGGQATLQLYVDPGSSERMLKVDAKDSEGITYSAELKPTGGSASVK*
Ga0137348_10210101	3300011398	Soil	VCSAEKGKLVLTDGKLSAKGAKGGQATLELYVEPGSSERMLKVDAKDSEGVTYAAELKRSGDSASAKS*
Ga0137340_11164631	3300011405	Soil	MPVSYHTFDVFAEKAQLVLTDDKLSARFEKGGRMTAQLYVDPASSERMLKAEGKNSQAFTYSANLKRTGDLISAK*
Ga0137450_11103011	3300011407	Soil	CETAITRTITKMPVHYDTVDVFAEKAQLVLTGDKLSATFEKGGRMTVQLYVDPASGERMLKAEGKNSKGFTYSADLKRTGDSVSAK*
Ga0137314_11524851	3300011420	Soil	YDTVDVFAEKAQLVLTDDKLSARFEKGGRMTAQLYVDPASSERMLKAEGKNSQAFTYSANLKRTGDLISAK*
Ga0137429_12606761	3300011437	Soil	AQLVLTGDKLSATFEKGGRMTVQLYVDPASGERMLKAEGRNSKGFSYLADLKRTGDSASAK*
Ga0137349_11047212	3300012160	Soil	AQGGSVSHSVIGVFAEKGKLVLTDGKVSAKGAKGGQATLELYVDPGSSERMLKVDAKDSQGFTYSAELKRTRDYASAK*
Ga0137321_11481201	3300012175	Soil	MPVSYHTFDVFAEKAQLVLTDDKLSARFEKGGRMTAQLYVDPASSERMLKAEGKTSQAFTYSANLKRTGDLIS
Ga0137362_101072511	3300012205	Vadose Zone Soil	KGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERILKSDARDFQGFTYSAELKRTGDSASAK*
Ga0137375_107214762	3300012360	Vadose Zone Soil	WQGHLVLTDGKLSTKFEKGGQLTVQLHADPATGERMLRAEGKNSQGFTYSADLKHTGDSASGK*
Ga0137359_115220361	3300012923	Vadose Zone Soil	AQGGSVSYSVIAVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERILKSDAKDSEGFTYSADLKRTGDSASAKR*
Ga0137359_115553861	3300012923	Vadose Zone Soil	VSYSVIAVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERILKSDARDFQGFTYSAELKRTGDSASAK*
Ga0126375_104332822	3300012948	Tropical Forest Soil	MSVTYDTIDVFAEKGKLVLTDGKLSTKFEKGGQVTVQLYVDPASGERMLKAEGKNSQGFTYSADLKRTGDYASAK*
Ga0126375_106511332	3300012948	Tropical Forest Soil	MSVSYDVIDVFAEKGKLVLTDGKLSTKFDKGGQVTAQLYVDPASGERMLKAEGKNYQGFTYSADLKRTGDYASAK*
Ga0126375_106555371	3300012948	Tropical Forest Soil	SYDVIDVFAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPATGERMLKAEGKNSQGFTYSADLKRTGDSASAK*
Ga0164298_105449231	3300012955	Soil	VSYSVIGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERMLKSDARDFQGFTYSAELKRTGDSASAK*
Ga0126369_1000800510	3300012971	Tropical Forest Soil	VSYDVISVFAEKGQLVLADGKLSTKFEKGGQMTAQLYVGPASGERMLKAEGKNSQGFTYSADLERTGDSGSAK*
Ga0126369_106033382	3300012971	Tropical Forest Soil	VSYDTISVFAEKGKVVLTDGKLSTKFEKGGQMTAQLYVDPASAKRMLKAEGKNFQGFTYSADLKRTGDSASAK*
Ga0126369_116999182	3300012971	Tropical Forest Soil	TYDTIGVFAEKGKLVLTDGKLSTKFEKGGHVTVQLYVDPASGERLLKADGKNSQGFTYSADLKRTEDSASAK*
Ga0126369_118427582	3300012971	Tropical Forest Soil	VSYSEVNVFAEPGQLVLADGKLKTKFEKGGQMTAQLYVDPASGERMLKADGKNSQGFTYSADLKRTGDSGSAKP*
Ga0075326_10192773	3300014271	Natural And Restored Wetlands	FVLTDGKLSAKGAKGGRATLVLYVDPGSRERMLKVDAKDSEGFTYSAELERTGDVASVK*
Ga0157380_107455152	3300014326	Switchgrass Rhizosphere	VSYRTIGEFAGKGKLVLTDGKLSAKSDKGGQMTLQLYVDPATGERMLKADAKDGKGLTYFADLKRTGDAVSAK*
Ga0180068_10894351	3300014864	Soil	MSVDYGVTDVFAENGKLVLTDGKLSTKFEKGGQLTAQLHVDPASGERMLKAEGKNSQGFTYSANLKRTGDSASAK*
Ga0180066_10249753	3300014873	Soil	QGMSVDYGVTDVFAEKGKLVLTDGKLSTKFEKGGQMTVQLYVDPVSGERMLKADGKNSQGFTYSANLKRTGDSASAK*
Ga0180083_10621941	3300014875	Soil	MSVDYGVTDVFAENGKLVLTDGKLSTKFEKGGQMTVQLYVDPASGERMLKAEGKNSQGFTYSANLKRTGDSASAK*
Ga0180069_11559431	3300014882	Soil	AITRTRTTAQGGSVSYSVIHVFAEQGHLILTDGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNSQGFTYSADLKRTGDSASAK*
Ga0180104_12408772	3300014884	Soil	VLSENGKLVLTDGKLSATGSKGGQMTLQLYVEPGSGERVLKVNAKDSEGITYSADLKRTGESAPAK*
Ga0137409_106872651	3300015245	Vadose Zone Soil	GVSVSYSVIGVFAEKGKLILTDGKLSARGEKGGQATLQLYVDPGSSERILKSDARDFQGFTYSAELKRTGESASAK*
Ga0180089_10761462	3300015254	Soil	MSVSYGVIDVFAEKGKLVLTDGKPSTKFEKGGQMTAQLYVDPASGERMLKAEGKNSQGFTYSANLKRTGDSASAK*
Ga0180085_12011752	3300015259	Soil	DYGVTDVFAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNSQGFTYSANLKRTGDSASAK*
Ga0182038_105010482	3300016445	Soil	GTGKLTLTDGKLSAKSENGQMTLQPYVDRGRSDRMLKVDAGDSGGFTYSAELKRTGDSGTAK
Ga0187775_100919603	3300017939	Tropical Peatland	MTKMPVHYDIVDVFAEKTQLVLTGDKLSATFEKGSRMTAQLYGRSSNWHHMLRTEGKNSQGFTYSAELKRTGDSAFAK
Ga0184635_100613784	3300018072	Groundwater Sediment	VDYGVTDVFAEKGKLVLTDGKLSTKFEKGGQMTVQLYVDPASGERMLKADGKNSQGFTYSADLKRTGDSASAK
Ga0180118_10185791	3300020063	Groundwater Sediment	GMSVDYGVTDVFAEKGKLVLTDGKLSTKFEKGGQLTVQLHVDPATGERMLRAEGKNSQGFTYSADLKRTGDLASSK
Ga0210379_101033582	3300021081	Groundwater Sediment	VSHSVSRVLSENGKLVLTDGKLSATGSKGGQMTLQLYVEPGSGERVLKVNAKDSEGITYSADLKRTGESAPAK
Ga0210408_111031462	3300021178	Soil	YDIAVMRTRTMASGTSVSYQVTGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPESSERILKSDARDFQGFTYSAELKRTGDSASAK
Ga0210384_108348791	3300021432	Soil	MSVSYDVIHVFAEQGRLVLTDGKLSTKFEKGGQLTVQLYVDPASGERMLKAEGKNSQGFTYSADLKRTGDAASAK
Ga0126371_105061512	3300021560	Tropical Forest Soil	VSYDTIGVFAEKGKLVLTDGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNFQGFTYSADLKRTGDSASAK
Ga0210143_10397622	3300025792	Natural And Restored Wetlands	VSYSVIRVFAEKGKFVLTDGKLSATGEKGGQATLQLYVDPGSSERILKADAKDSEGFTYSADLKRIGGSISAK
Ga0207684_102282202	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSYQVTGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPESGERILKADSRDYEGFTYSAELKRTGESASAK
Ga0207646_105791671	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	YDIAVMRTRTTASGTSVSYQVTGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPESSERVLKSDARDFQGFTYSAELKRTGESASAK
Ga0208420_10180261	3300026028	Natural And Restored Wetlands	AYEFVSYRTIGEFAGKGKLVLTDGKLSAKSDKGGQMTLQLYVDPPTGERMLKADAKDREGFSYSADLKRTG
Ga0209973_10758292	3300027252	Arabidopsis Thaliana Rhizosphere	VSHSVSRVLSENGKLVLTDGKLSATGSKGGQMTLQLVEPGSGERVLKVNAKDSEGITYSADLKRTGESAPAK
Ga0208685_10123931	3300027513	Soil	VSYSVIRVLDEKGKLVLTDGKLSAKFEKGGQVTLQLYVDPESGARILKAHSRDYEGVTYSADLKRTGDSASAK
Ga0209799_10107781	3300027654	Tropical Forest Soil	FAEKGQLVLADGKLSTKFEKGGQMTAQLYVDPASGERMLKAEGKNSQGFTYSADLERTGDSGSAK
Ga0209819_100954681	3300027722	Freshwater Sediment	VNSSVIGVFAEKGKLVLTDGKLSAKGAKGGQATLQLYVDPGSSERMLKVDAKDSEGFTYSAELKRTGDVASAK
Ga0209819_103346011	3300027722	Freshwater Sediment	VSYSVIGVFAEKGKLVLTDGKLSAKGAKGGQATLQLYEDPGSSERMLKVDAKDSEGFTYSAELKRTGDSASAK
Ga0209178_11340401	3300027725	Agricultural Soil	DGGACETTITRTRTTMPVHYDAIDVFAEKTQLVLTDNKLSAIFEKGGHMSAQLYVDPATSERMIRAEGKSSGGFTYSADLKRIGDSASAK
Ga0209073_102619722	3300027765	Agricultural Soil	RTTMPVHYDAIHVFAEKTQLVLTDNKLSAIFEKGGHMSAQLYVDPATSERMIRAEGKSSGGFTYSADLKRIGDSASAK
Ga0209814_100102644	3300027873	Populus Rhizosphere	AITRTRTTAAGAQVSYSVIGVFAEKGKLVLTDGKLSAKGEKGGKATLQLYVDPGSSERMLKSDARDFQGFTYSAELKRTGESASAK
Ga0209465_100310703	3300027874	Tropical Forest Soil	KLVLTDGKLSTKFEKGGQMTAQLYVDPASAKRMLKAEGKNFQGFTYSADLKRTGDSASAK
Ga0209382_103115944	3300027909	Populus Rhizosphere	RTITKMPVRYSTLDVFAEETQLVLTDDKLSAKFEKGGHMTAQVYVDPASGERMLKAQGKNSKGFSYSADLKRTGDSASAK
Ga0307498_103053222	3300031170	Soil	GGSVNYSVIGLFAEKGKLVLSEGKLSAKGEKGGQATLQLYVDPGSSERILKADAKDSEGITYSAELKPTAAAK
Ga0310888_104989053	3300031538	Soil	NLERVLSENGKLTLTDGKLTTTGSKGGQMTLQLYLDAGSGARMLKAQAKDYEGVIYSAELKPSPDSASLTK
Ga0307469_100799112	3300031720	Hardwood Forest Soil	VIGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERMLKSDARDFQGFTYSAELKRTGESASAK
Ga0307468_1024568331	3300031740	Hardwood Forest Soil	RTTAQGGSVSSTVIGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERILKSDARDFQGFTYSAELKRTGESASAK
Ga0310917_110682141	3300031833	Soil	RTMTKVQGMSVSYDTIDVFAEKGKLVLTDGKLSTKFEKGGQVTVQLYVDPASGERLLKADGKNSQGFTYSADLKRTEDSASAK
Ga0310904_107347831	3300031854	Soil	SSSVIAVFAEKGKLVLTDGKLSAKGAKGGQATLQLYVDPGSRERMLKVDAKDSEGFTYSAELKRTGDSASAK
Ga0306925_110441531	3300031890	Soil	KLVLTDGKLSTKFEKGGQVTVQLYVDPASGERLLKADGKNSQGFTYSADLKRTEDSASAK
Ga0306923_101932113	3300031910	Soil	EKGKLVLTDGKLSTKFEKGGQVTVQLYVDPASGERLLKADGKNSQGFTYSADLKRTEDSASAK
Ga0307470_106293282	3300032174	Hardwood Forest Soil	TRTKVQGTSVSYDVIDVFAEQGKLVLTDDKLSTKFQKGGQMTVQLYVDPASGERMLKAEGKNSQGFTYSADLKRTGDAASAK
Ga0307471_1005443492	3300032180	Hardwood Forest Soil	VTGVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERMLKSDARDFQGFTYSAELKRTGESASAK
Ga0307472_1007052862	3300032205	Hardwood Forest Soil	MRTRTTAQGGSVSSSVIGVFAEKGKLVLTDGKLSAKGAKGGQATLQLYVDPGSSERMLKVDAKDSEGFTYSAELKRTGDFASAK
Ga0307472_1019408292	3300032205	Hardwood Forest Soil	GVFAEKGKLVLTDGKLSAKGEKGGQATLQLYVDPGSSERILKADARDFQGFTYSADLKRTGESASAK
Ga0335080_102893683	3300032828	Soil	GCETAITRTITKMPVHYDTVDVFAEKTQLVLTGDKLSATFEKGGRMTVQLYVDPASGERMLKAEGKNSQSFTYSADLKRTGNSLSAK
Ga0364945_0194045_5_214	3300034115	Sediment	VIGVFAEKGKLVLTDGKLSAKGAKGGQATLQLYVDPGSSERILKVDAKDSEGFTYSAELKRTGESASAK
Ga0364927_0032968_1068_1289	3300034148	Sediment	VHYDTVDVFAEKAQLVLTGDKLSAKFEKGGQLTVQLHVDPAPGERMLRAEGKNSQGFTYSADLKSTGDSASAK
Ga0364935_0196919_2_196	3300034151	Sediment	AEKAQLVLTDDKLSARFEKGGRMTAQLYVDPASSERMLKAEGKNSQAFTYSANLKRTGDLISAK
Ga0364923_0003577_6_233	3300034690	Sediment	VSVSYSVIRVFAESGKLVLTDGKLSLKGEKGGQATLQLYVDSRSSERMLKADAKDSEGFIYSAELKRTGDVAFAK
Ga0364923_0147688_78_299	3300034690	Sediment	VDYGVTDVFAEKGKLVLTDGKLSTKFEKGGQMTVQLYVDPASGERMLKADGKNSQGFTYSANLKRTGDSASAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056008

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences