Metagenome / Metatranscriptome Family F055997

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055997
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	61 residues
Representative Sequence	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Number of Associated Samples	118
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.45 %
% of genes near scaffold ends (potentially truncated)	23.91 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.652 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.565 % of family members)
Environment Ontology (ENVO)	Unclassified (31.159 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.826 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.78% β-sheet: 0.00% Coil/Unstructured: 42.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF02881	SRP54_N	45.65
PF02463	SMC_N	33.33
PF07311	Dodecin	4.35
PF03631	Virul_fac_BrkB	1.45
PF00027	cNMP_binding	0.72
PF01555	N6_N4_Mtase	0.72
PF00583	Acetyltransf_1	0.72
PF14340	DUF4395	0.72
PF02978	SRP_SPB	0.72
PF13083	KH_4	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	4.35
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.45
COG0541	Signal recognition particle GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.72
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.72
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.72
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	63.77 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.77 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	23.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.87 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6.52 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.87 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	4.35 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.87 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	4.35 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.87 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4.35 %
Unclassified	root	N/A	4.35 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig506250	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
2170459015\|G14TP7Y01EJN7L	Not Available	554	Open in IMG/M
3300000891\|JGI10214J12806_12233886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	524	Open in IMG/M
3300005166\|Ga0066674_10086920	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300005171\|Ga0066677_10002276	All Organisms → cellular organisms → Bacteria	7152	Open in IMG/M
3300005171\|Ga0066677_10631864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300005172\|Ga0066683_10350035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	917	Open in IMG/M
3300005176\|Ga0066679_10213393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1234	Open in IMG/M
3300005177\|Ga0066690_10434996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300005178\|Ga0066688_10081859	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300005178\|Ga0066688_10592048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300005186\|Ga0066676_10249639	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300005328\|Ga0070676_10574136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300005334\|Ga0068869_100824367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300005347\|Ga0070668_100051264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3179	Open in IMG/M
3300005353\|Ga0070669_101586092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300005354\|Ga0070675_100202750	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300005366\|Ga0070659_102051959	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005434\|Ga0070709_10050890	All Organisms → cellular organisms → Bacteria	2597	Open in IMG/M
3300005434\|Ga0070709_10606003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	844	Open in IMG/M
3300005440\|Ga0070705_100125971	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300005444\|Ga0070694_100311264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1209	Open in IMG/M
3300005445\|Ga0070708_101406303	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005445\|Ga0070708_101960279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300005450\|Ga0066682_10397213	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005467\|Ga0070706_101896777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300005468\|Ga0070707_101237968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300005536\|Ga0070697_100156039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1926	Open in IMG/M
3300005545\|Ga0070695_100066547	All Organisms → cellular organisms → Bacteria	2348	Open in IMG/M
3300005546\|Ga0070696_101307672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300005549\|Ga0070704_100500045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1055	Open in IMG/M
3300005556\|Ga0066707_10784921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300005558\|Ga0066698_10300824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1111	Open in IMG/M
3300005563\|Ga0068855_100189087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2324	Open in IMG/M
3300005569\|Ga0066705_10320673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	981	Open in IMG/M
3300005569\|Ga0066705_10535120	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300005574\|Ga0066694_10181156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1000	Open in IMG/M
3300005575\|Ga0066702_10645784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300005576\|Ga0066708_10439274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300005587\|Ga0066654_10214997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1004	Open in IMG/M
3300005615\|Ga0070702_100321933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1078	Open in IMG/M
3300005713\|Ga0066905_100018550	All Organisms → cellular organisms → Bacteria	3624	Open in IMG/M
3300005719\|Ga0068861_100905890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300006031\|Ga0066651_10794396	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006032\|Ga0066696_10238249	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300006032\|Ga0066696_10846069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300006173\|Ga0070716_100353110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1041	Open in IMG/M
3300006175\|Ga0070712_100132394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1891	Open in IMG/M
3300006797\|Ga0066659_10578227	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300006800\|Ga0066660_10857815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300006804\|Ga0079221_10142693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1241	Open in IMG/M
3300006852\|Ga0075433_10206252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1747	Open in IMG/M
3300006854\|Ga0075425_100009629	All Organisms → cellular organisms → Bacteria	10288	Open in IMG/M
3300006854\|Ga0075425_100877064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300006871\|Ga0075434_101893036	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300006881\|Ga0068865_100710604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300006954\|Ga0079219_10286730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300009012\|Ga0066710_101087745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1236	Open in IMG/M
3300009012\|Ga0066710_103956214	Not Available	555	Open in IMG/M
3300009137\|Ga0066709_100384754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1940	Open in IMG/M
3300009137\|Ga0066709_101361552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1036	Open in IMG/M
3300009137\|Ga0066709_101566393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300010047\|Ga0126382_10003500	All Organisms → cellular organisms → Bacteria	6821	Open in IMG/M
3300010329\|Ga0134111_10171066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300010333\|Ga0134080_10277736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	746	Open in IMG/M
3300010337\|Ga0134062_10379496	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300010373\|Ga0134128_12707377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300012198\|Ga0137364_10194740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1484	Open in IMG/M
3300012198\|Ga0137364_10324841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1145	Open in IMG/M
3300012198\|Ga0137364_10563351	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012200\|Ga0137382_10232501	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300012201\|Ga0137365_10057866	Not Available	2927	Open in IMG/M
3300012201\|Ga0137365_10610269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	799	Open in IMG/M
3300012208\|Ga0137376_11344480	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012209\|Ga0137379_10769500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	868	Open in IMG/M
3300012211\|Ga0137377_10028802	All Organisms → cellular organisms → Bacteria	5010	Open in IMG/M
3300012285\|Ga0137370_10079781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1812	Open in IMG/M
3300012350\|Ga0137372_10002858	All Organisms → cellular organisms → Bacteria	16756	Open in IMG/M
3300012350\|Ga0137372_10273643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1319	Open in IMG/M
3300012351\|Ga0137386_11262221	Not Available	514	Open in IMG/M
3300012353\|Ga0137367_10117744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1952	Open in IMG/M
3300012354\|Ga0137366_10314374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1151	Open in IMG/M
3300012356\|Ga0137371_10078054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2567	Open in IMG/M
3300012356\|Ga0137371_10082069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2502	Open in IMG/M
3300012908\|Ga0157286_10252842	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300012930\|Ga0137407_10348428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1363	Open in IMG/M
3300012930\|Ga0137407_12037350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300012960\|Ga0164301_11396734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300012977\|Ga0134087_10508946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300012984\|Ga0164309_11127373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300013308\|Ga0157375_11055730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	950	Open in IMG/M
3300014150\|Ga0134081_10083381	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300014968\|Ga0157379_12031064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300017654\|Ga0134069_1278315	Not Available	588	Open in IMG/M
3300017997\|Ga0184610_1130000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	816	Open in IMG/M
3300018027\|Ga0184605_10021024	All Organisms → cellular organisms → Bacteria	2616	Open in IMG/M
3300018027\|Ga0184605_10032308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2164	Open in IMG/M
3300018028\|Ga0184608_10026514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2151	Open in IMG/M
3300018061\|Ga0184619_10009698	All Organisms → cellular organisms → Bacteria	3749	Open in IMG/M
3300018431\|Ga0066655_10201243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1232	Open in IMG/M
3300018431\|Ga0066655_11263064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300018465\|Ga0190269_10176864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1132	Open in IMG/M
3300018468\|Ga0066662_10365990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1249	Open in IMG/M
3300018482\|Ga0066669_11306994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	656	Open in IMG/M
3300019873\|Ga0193700_1061699	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300019875\|Ga0193701_1002285	All Organisms → cellular organisms → Bacteria	3415	Open in IMG/M
3300021418\|Ga0193695_1002101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3507	Open in IMG/M
3300022694\|Ga0222623_10262038	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300025885\|Ga0207653_10235178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	699	Open in IMG/M
3300025901\|Ga0207688_10121135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1527	Open in IMG/M
3300025907\|Ga0207645_10477573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	843	Open in IMG/M
3300025922\|Ga0207646_10418796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1209	Open in IMG/M
3300025926\|Ga0207659_10436106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1101	Open in IMG/M
3300025929\|Ga0207664_10611306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	979	Open in IMG/M
3300025938\|Ga0207704_10394463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1090	Open in IMG/M
3300025939\|Ga0207665_10028405	All Organisms → cellular organisms → Bacteria	3694	Open in IMG/M
3300026023\|Ga0207677_11946773	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300026118\|Ga0207675_100512662	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300026118\|Ga0207675_102031869	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300026142\|Ga0207698_11812366	Not Available	625	Open in IMG/M
3300026277\|Ga0209350_1025320	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300026277\|Ga0209350_1147037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300026295\|Ga0209234_1127637	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300026315\|Ga0209686_1017692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2872	Open in IMG/M
3300026326\|Ga0209801_1146745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300026331\|Ga0209267_1081013	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300026523\|Ga0209808_1316585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300026550\|Ga0209474_10060338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2674	Open in IMG/M
3300027725\|Ga0209178_1187996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	727	Open in IMG/M
3300028707\|Ga0307291_1057421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	942	Open in IMG/M
3300028718\|Ga0307307_10017518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1960	Open in IMG/M
3300028784\|Ga0307282_10071168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1581	Open in IMG/M
3300028799\|Ga0307284_10107485	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300028807\|Ga0307305_10534033	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300028824\|Ga0307310_10062354	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300028881\|Ga0307277_10011405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3425	Open in IMG/M
3300028885\|Ga0307304_10034478	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300031421\|Ga0308194_10126333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.61%
Host-Associated	Host-Associated	16.67%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.26%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	4.35%
Solid Waste	Engineered → Solid Waste	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.25%
Sediment	Environmental → Aquatic → Sediment	4.35%
Grass	Engineered → Solid Waste → Grass	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.59%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Composting	Engineered → Solid Waste → Grass → Composting	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_02609570	2124908045	Soil	MDRSPDVTVGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKETIRKHAPQE
4PV_03551300	2170459015	Switchgrass, Maize And Mischanthus Litter	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
JGI10214J12806_122338862	3300000891	Soil	MDRSPDLTLGPLATLGGTLLALALLRRSWKLAAAGIAAVAADQRLPASRRFKEAVRKRAPQA*
Ga0066674_100869203	3300005166	Soil	MKGPDVVLGPLATVGAALFGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAPHA*
Ga0066677_100022763	3300005171	Soil	MKRYDVVLGPLATAGGLLLGLSLWRRSWKLGATGVAAIVADQRLPAAWRPRERLRKHAPQA*
Ga0066677_106318641	3300005171	Soil	VKRAEVVLGPLATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDRLRKHAPQA*
Ga0066683_103500351	3300005172	Soil	MKGPDAVLGPLATVGAALFGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAPQA*
Ga0066679_102133932	3300005176	Soil	VRRAELVVGPLATAGGALLVLRLLRRSWKLAVKGVAAIVADQRLPAAGRLKDQLRKHPPQA*
Ga0066690_104349962	3300005177	Soil	MKRVEVVLGPLATAGTALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDQLRKHAPQA*
Ga0066688_100818594	3300005178	Soil	MKRYDVVLGPLATAGGLLLGLSLWRRSWKLGATGVAAIVADQRLPAASRPRERLRKHAPQA*
Ga0066688_105920481	3300005178	Soil	VKRAEVVLGPLATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARR
Ga0066676_102496391	3300005186	Soil	LGPLATVGAALLGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAPQA*
Ga0070676_105741362	3300005328	Miscanthus Rhizosphere	MDRSRDVTLGPLATVGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASGRLKEAIRKHAPQA*
Ga0068869_1008243671	3300005334	Miscanthus Rhizosphere	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0070668_1000512642	3300005347	Switchgrass Rhizosphere	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASGRLKEAIRKHAPQA*
Ga0070669_1015860921	3300005353	Switchgrass Rhizosphere	TLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQG*
Ga0070675_1002027501	3300005354	Miscanthus Rhizosphere	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRNHAPQA*
Ga0070659_1020519591	3300005366	Corn Rhizosphere	DVTLGPLATIGGALLGLAFVRRSWKLAAAGLAAVAADQRLPASRRLKEAIRKHAPQA*
Ga0070709_100508904	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSPDVTLGPLATLGGTLLALALLRRSWKLAAAGIAAVAADQRLPASRRFKEAVRKRAPQA*
Ga0070709_106060031	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHA
Ga0070705_1001259713	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGLAAVAADQRLPASRRLKEAIRKHAPQA*
Ga0070694_1003112642	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGLAAVAADQRLPASRRLKEAIRKHAPQA*
Ga0070708_1014063031	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ATLGGTLLALALLRRSWKLAAAGIAAVAADQRLPASRRFKEAVRKRAPQA*
Ga0070708_1019602791	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRRSDVVLGPLATLGGGLIGLGLVRRSWKLAAAGVAAIVADQRLPAARRLKNRLRKHAPQA*
Ga0066682_103972131	3300005450	Soil	MKGPDAVLGPLATVGAALFGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKDELRKHAPQA*
Ga0070706_1018967771	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGLAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0070707_1012379682	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSPDVTLGPLATLGGTLLALALLRRSWKLAAAGIAAVAADQRLPASRRLKEAIRKHAPQA*
Ga0070697_1001560392	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRDVTLGPLATVGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0070695_1000665474	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	RDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASGRLKEAIRKHAPQA*
Ga0070696_1013076722	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKE
Ga0070704_1005000452	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSPDVTLGPLATLGGTLFALALLRRSWKLAAAGIAAVAADQRLPASRRFKEAVRKRAPQA*
Ga0066707_107849212	3300005556	Soil	MKGPDVVLGPLATAGGALLGLGLLRRSWKLAAVGAAAIAADQRSPASRRLKDRLRKHAPLA*
Ga0066698_103008242	3300005558	Soil	VNRPDVVLGPLATIGGALLTLGLLPRSWKLAATGAAAIVADQRLPASRRLKDRLRQNATQA*
Ga0068855_1001890872	3300005563	Corn Rhizosphere	VTKLRRIAAMDRSRDVTLGPLATVGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0066705_103206732	3300005569	Soil	VERSTKLVLGPLFTVGAVLGRIGVIRRSWKLAAAGAAAILADQRLPAAQRLKAHLQKSAPQA*
Ga0066705_105351201	3300005569	Soil	MHRSTEVVLGPLATVGGALLGLAVLRRSWKLAAAGAAAVFADQRLPAGRRLKEALRKSTPQG*
Ga0066694_101811562	3300005574	Soil	VRTPDVVLGPLATAGGVLLGLAVFRRSWRLAAIGVAAVVADQRLPAARRLKDELRKHAPQA*
Ga0066702_106457841	3300005575	Soil	VLGPLATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRPKDQLRKHAPQA*
Ga0066708_104392742	3300005576	Soil	VKRAEVVLGPLATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDRLRKHAPHA*
Ga0066654_102149972	3300005587	Soil	VKRAEVVLGPLATGGAALLGLSLLRRSWKLAVAGAAAIVADQRLPTARRLKDRLRKHAPQA*
Ga0070702_1003219332	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0066905_1000185502	3300005713	Tropical Forest Soil	MDRPGDVTLGPLATLGGALLAFALVRRSWKLAAAGAAAVIADQRLPASRRFKEAVRKRAPQA*
Ga0068861_1009058902	3300005719	Switchgrass Rhizosphere	RDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0066651_107943961	3300006031	Soil	LVAAGGALLGLALFRRSWKLAATGIAAPVADQRLPAARRLKDELRKHAPQA*
Ga0066696_102382492	3300006032	Soil	MHRSTEVVLGPLATVGGALLGLAVLRRSWKLATAGAAAVFADQRLPAGRRLKEALRKSTPQG*
Ga0066696_108460692	3300006032	Soil	RYDVVLGPLATAGGLLLGLSLWRRSWKLGATGVAAIVADQRLPAASRPRERLRKHAPQA*
Ga0070716_1003531102	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSPDVTLGPLATLGGTLLALALLRRSWKLAAAGIAAVAADQRLPASRRFKEALRKRAPQA*
Ga0070712_1001323942	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQG*
Ga0066659_105782271	3300006797	Soil	MKGPDVVLGPLATAGGALLGLGLLRRSWKLAAVGAAAIAADQRSPASRRLKDRLRKRAPLA*
Ga0066660_108578152	3300006800	Soil	MKRYDVVLGPLATAGGLLLGLSLWRRSWKLGATGVAAIVADQRLPAAWRLRERLRKHAPQA*
Ga0079221_101426932	3300006804	Agricultural Soil	MDRSPDVTLGPLATVGGVMLALALLRRSWKLAAAGVAAVVADQRLPASRRFKEALRKRAPQA*
Ga0075433_102062522	3300006852	Populus Rhizosphere	MDRSPDVTLGPLATVGGVMLTLALLRRSWKLAAAGVAAVVADQRLPASRRFKEALRKRTPQA*
Ga0075425_1000096294	3300006854	Populus Rhizosphere	MDRSPDVTLGPLATVGGVMLTLALLRRSWKLAAAGVAAVVADQRLPASRRFKEALRKRAPQA*
Ga0075425_1008770641	3300006854	Populus Rhizosphere	MDRSPDVTLGPLATLGGTLLALALLRRSWKLAAAGIAAVAADQRLPASRRFKEA
Ga0075434_1018930362	3300006871	Populus Rhizosphere	RRPPPSPSNLRRIAAMDRSPDVTLGPLATLGGTLLALALLRRSWKLAAAGIAAVAADQRLPASRRFKEAVRKRAPQA*
Ga0068865_1007106042	3300006881	Miscanthus Rhizosphere	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRNHAPQA*
Ga0079219_102867302	3300006954	Agricultural Soil	MDRSPDVTLGPLATVGGVMLALALLRRSWKLAAAGVAAVVAAQRLLASRRFKEALRKRAPQA*
Ga0066710_1010877452	3300009012	Grasslands Soil	MKGPDVVLGPLATVGAALLGLGVLRRSWKLAAAGGVAIVTDQRLPAARRLKDELRKRAPQ
Ga0066710_1039562142	3300009012	Grasslands Soil	VQRSDVVLGPLATAGGALLGLGLLRRSRKLAAVGAAAIAADQRSPASRRLKDRLRKHAPL
Ga0066709_1003847542	3300009137	Grasslands Soil	MKGPDVVLGPLATVGAALLGLGVLRRSWKLAAAGGVAIVTDQRLPAARRLKDELRKRAPQA*
Ga0066709_1013615522	3300009137	Grasslands Soil	VKRAEVVLGPLATGGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDRLRKHAPQA*
Ga0066709_1015663933	3300009137	Grasslands Soil	VKRSDVVLGPLATAGGALLGLGLLRRSWKLAAVGAAAIAADQRSPASRRLKDRLRKHAPLA*
Ga0126382_1000350011	3300010047	Tropical Forest Soil	DRPGDVTLGPLATLGGTLLAFALVRRSWKLAAAGAAAVIVDQRLPASRRFKEAVRKRAPQA*
Ga0134111_101710661	3300010329	Grasslands Soil	MKGPDVVLGPLATVGAALLGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAPQA*
Ga0134080_102777362	3300010333	Grasslands Soil	MDRSPDVTLGPLATIGGALLGLAFVRRSWKVAAAGFGAFVADQRLPASRRLKEAIRKHAPQA*
Ga0134062_103794962	3300010337	Grasslands Soil	VRTPDIVLGSLVAAGGALLGLALFRRSWKLAATGIAAPVADQRLPAARRLKDELRKHAPQA*
Ga0134128_127073772	3300010373	Terrestrial Soil	GPLATLGGTLLALALLRRSWKLAAAGIAAVAADQRLPASRRFKEAVRKRAPQA*
Ga0137364_101947402	3300012198	Vadose Zone Soil	VKRAEVVLGPLATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDRLRKHAPQG*
Ga0137364_103248412	3300012198	Vadose Zone Soil	MNRPDVVLGPLATIGALLGLGLLRRSWKLVATGAAAIAADQRLPASQRLKNRLRKNAPQA
Ga0137364_105633511	3300012198	Vadose Zone Soil	KPLPRIAGMKGPDVVLGPLATVGAALFGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAPQA*
Ga0137382_102325012	3300012200	Vadose Zone Soil	MKGPDVVLGPLATVGAALFGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAPQA*
Ga0137365_100578662	3300012201	Vadose Zone Soil	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAATVAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0137365_106102692	3300012201	Vadose Zone Soil	VNRPDVVLGPLATIGGTLLGLGLIRRSWKLVATGAAAIAADQRLPASRRLKDRLRKNAPQA*
Ga0137376_113444802	3300012208	Vadose Zone Soil	VNRPDVVLGPLATIGGAVLGFGLLRRSWKLSVTGAAVLAADQRLSAARWLKDRLRKNATPA*
Ga0137379_107695002	3300012209	Vadose Zone Soil	MDRSPHVTLGPLPTIGGALLGLAFIRRSWKLAAAGVAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0137377_100288024	3300012211	Vadose Zone Soil	MKRAEVVLGPFATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDQLRKHAPQA*
Ga0137370_100797813	3300012285	Vadose Zone Soil	MKGPDVVLGPLATVGAALFGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHALQA*
Ga0137372_1000285824	3300012350	Vadose Zone Soil	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGVAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0137372_102736432	3300012350	Vadose Zone Soil	VNRPDVVLGPLATIGGTLLGLGLLRRSWKLVATGAAAIAADQRLPASQRLKGRLRKNAPQA*
Ga0137386_112622211	3300012351	Vadose Zone Soil	MKGPDAVLGPLATVGAALLGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAPQA*
Ga0137367_101177444	3300012353	Vadose Zone Soil	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGVAAVVADQRLSASRRLKEAIRKHAPQA*
Ga0137366_103143742	3300012354	Vadose Zone Soil	MDRSPHVTLGPLPTIGGALLGLAFVRRSWKLAAAGVAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0137371_100780542	3300012356	Vadose Zone Soil	MNRPDVVLGPLATIGALLGLGLLRRSWKLVATGAAAIAADQQLPASQRLKNRLRKNAPQA
Ga0137371_100820692	3300012356	Vadose Zone Soil	MDRSPHVTLGPLPTIGGALLGLAFVRRSWKLAAAGVAAVVADQRLSASRRLKEAIRKHAPQA*
Ga0157286_102528422	3300012908	Soil	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGVAAVVADQRLPASRRFKEAVRKRAPQA*
Ga0137407_103484281	3300012930	Vadose Zone Soil	MKGPDVVLGPLATVGAALFGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAP
Ga0137407_120373502	3300012930	Vadose Zone Soil	MKGPDVVLGPLATVGAALLGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAP
Ga0164301_113967342	3300012960	Soil	MDRSPDVTLGPLATIGGALLGLAFVRRSRKLPAAGFAAVVADQRLPASRRLKEAIRKHAPQG*
Ga0134087_105089462	3300012977	Grasslands Soil	VKRAEVVLGPLATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDQLRKHAPQA*
Ga0164309_111273731	3300012984	Soil	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAVAGFAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0157375_110557302	3300013308	Miscanthus Rhizosphere	MDRSRDVTLGPLATVGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQG*
Ga0134081_100833811	3300014150	Grasslands Soil	TAGGQLLGLSLWRRSWKLGATGVAAIVADQRLPAASRPRERLRKHAPQA*
Ga0157379_120310641	3300014968	Switchgrass Rhizosphere	TLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA*
Ga0134069_12783151	3300017654	Grasslands Soil	VNRPDVVLGPLATIGALLGLGLLRRSWKLVATGAAAIAADQRLPASQRLKNRLRKNAPQA
Ga0184610_11300002	3300017997	Groundwater Sediment	MGRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Ga0184605_100210243	3300018027	Groundwater Sediment	VNRPDVVLGPLATIGGTLLGLGLLRRSWKLVGTGAAAIAADQRLPASRRLKDRLRKNVPQ
Ga0184605_100323082	3300018027	Groundwater Sediment	MDRSRDVTVGPLATIGGALLGLAFARRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Ga0184608_100265142	3300018028	Groundwater Sediment	VRTPDVVLGPLATAGGVLLGLALFRRSWKLAATGVAAVVADQQLPAARRLKDELRKHAPQ
Ga0184619_100096983	3300018061	Groundwater Sediment	MDRSRDVTVGPLATIGGALLGLAFARRSWKLAAAGFAAVVADQRLPASRRLKEAIRNHAPQV
Ga0066655_102012432	3300018431	Grasslands Soil	MKRYDVVLGPLATAGGLLLGLSLWRRSWKLGATGVAAIVADQRLPAAWRPRERLRKHAPQ
Ga0066655_112630643	3300018431	Grasslands Soil	VKRAEVVLGPLATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDRLRKHAPQ
Ga0190269_101768642	3300018465	Soil	MDRSRDATFGPLATVGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Ga0066662_103659902	3300018468	Grasslands Soil	VERSTKLVLGPLFTVGAVLGRIGVIRRSWKLAAAGAAAILADQRLPAAQRLKAHLQKSAPQA
Ga0066669_113069942	3300018482	Grasslands Soil	VRTPDIVLGPLVAAGGALLGLALFRRSWKLAATGIAAPVADQRLPAARRLKDELRKHAPQ
Ga0193700_10616992	3300019873	Soil	VRTPDVVLGPLATAGGVLLGLALFRRSWKLAATGVAAVVADHRLPAARRLKDELRKHAPQ
Ga0193701_10022852	3300019875	Soil	MGRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHPPQA
Ga0193695_10021012	3300021418	Soil	VKRSDLVLDPLATIGGGLIGPGFVRPSWKLAAAGAAAIVADQRLPAARRLKDRLRKHAPQ
Ga0222623_102620381	3300022694	Groundwater Sediment	AMGRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Ga0207653_102351782	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Ga0207688_101211352	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSRDVTLGPLATVGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASGRLKEAIRKHAPQA
Ga0207645_104775732	3300025907	Miscanthus Rhizosphere	MDRSRDVTLGPLATVGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Ga0207646_104187962	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRRSDVVLGPLATLGGGLIGLGLVRRSWKLAAAGVAAIVADQRLPAARRLKNRLQKHAPQ
Ga0207659_104361062	3300025926	Miscanthus Rhizosphere	MDRSPDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRNHAPQA
Ga0207664_106113062	3300025929	Agricultural Soil	MDRSPDLTLGPLATLGGTLLALALLRRSWKLAAAGIAAVAADQRLPASRRFKEAVRKRAPQA
Ga0207704_103944632	3300025938	Miscanthus Rhizosphere	MDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRNHAPQA
Ga0207665_100284053	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDRSPDVTLGPLATLGGTLFALALLRRSWKLAAAGIAAVAADQRLPASRRFKEAVRKRAPQA
Ga0207677_119467731	3300026023	Miscanthus Rhizosphere	RRISAMDRSRDVTLGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRNHAPQA
Ga0207675_1005126622	3300026118	Switchgrass Rhizosphere	PLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQG
Ga0207675_1020318691	3300026118	Switchgrass Rhizosphere	RDVTLGPLATVGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Ga0207698_118123662	3300026142	Corn Rhizosphere	AGFGRRVTKLRRIAAMDRSRDVTLGPLATVGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Ga0209350_10253204	3300026277	Grasslands Soil	VLGPLATVGAALLGLGVLRRSWKLAAAGGVAIVTDQRLPAARRLKDELRKRAPQA
Ga0209350_11470371	3300026277	Grasslands Soil	LATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDRLRKHAPHA
Ga0209234_11276372	3300026295	Grasslands Soil	MKGPDVVLGPLATVGAALFGLGVLRRSWKLAAAGAVAIVADQRLPAARRLKHELRKHAPQ
Ga0209686_10176921	3300026315	Soil	MKRYDVVLGPLATAGGLLLGLSLWRRSWKLGATGVAAIVADQRLPAAWRPRER
Ga0209801_11467452	3300026326	Soil	MKGPDVVLGPLATAGGALLGLGLLRRSWKLAAVGAAAIAADQRSPASRRLKDRLRKHAPL
Ga0209267_10810133	3300026331	Soil	MKRYDVVLGPLATAGGLLLGLSLWRRSWKLGATGVAAIVADQRLPAASRPRERLRKHAPQ
Ga0209808_13165852	3300026523	Soil	VKRAEVVLGPLATAGAALLGLSLLRRSWKLAVAGAAAIVADQRLPAARRLKDRLRKHAPH
Ga0209474_100603381	3300026550	Soil	NRGMKRYDVVLGPLATAGGLLLGLSLWRRSWKLGATGVAAIVADQRLPAASRPRERLRKHAPQA
Ga0209178_11879962	3300027725	Agricultural Soil	MDRSPDVTLGPLATVGGVMLALALLRRSWKLAAAGVAAVVADQRLPASRRFKEALRKRAPQA
Ga0307291_10574212	3300028707	Soil	MDRSRDVTVGPLATIGGALLGLAFVRRSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA
Ga0307307_100175184	3300028718	Soil	VNRPDVVLGPLATIGGALLGFGLLRRSWKLIATGAAAIVADQRLPASQRLKDRLLKNAPQ
Ga0307282_100711682	3300028784	Soil	MNRPDVIVGPLATIGGALLGFGLLRRSWKLIATGAAAIVADQRLPASQRLKDRLLKNAPQ
Ga0307284_101074851	3300028799	Soil	MNRPDVIVGPLATIGGALLGLGLLRRSWKLVATGAATIAADQRLPASRRLKDRLRKNASQ
Ga0307305_105340332	3300028807	Soil	NRTVNRPDVVLGPLATIGGTLLGLGLLRRSWKLVGTGAAAIAADQRLPASRRLKDRLRKNVPQA
Ga0307310_100623542	3300028824	Soil	VNRPDVVLGPLATIGGALLWFGLLRRSWKLIATGAAAIVADQRLPASQRLKDRLLKNAPQ
Ga0307277_100114052	3300028881	Soil	MNRPDVLVGPLATVGGALLGLGLLRRSWKLAATGAAAIAADQRLPASRRLKDRLRKNAPQ
Ga0307304_100344782	3300028885	Soil	VRTPDVLGPLATAGGVLLGLALFRRSWKLAATGVAAVVADQQLPAARRLKDELRKHAPQV
Ga0308194_101263332	3300031421	Soil	MDRSRDVTLGPLATIGGALLGLAFVRHSWKLAAAGFAAVVADQRLPASRRLKEAIRKHAPQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055997

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences