Metagenome / Metatranscriptome Family F055982

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055982
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	44 residues
Representative Sequence	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSEAAA
Number of Associated Samples	105
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.45 %
% of genes near scaffold ends (potentially truncated)	40.58 %
% of genes from short scaffolds (< 2000 bps)	73.19 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.826 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.362 % of family members)
Environment Ontology (ENVO)	Unclassified (40.580 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.870 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00589	Phage_integrase	6.52
PF09907	HigB_toxin	2.17
PF01844	HNH	1.45
PF16925	TetR_C_13	1.45
PF04397	LytTR	1.45
PF07676	PD40	1.45
PF00296	Bac_luciferase	1.45
PF00871	Acetate_kinase	1.45
PF01850	PIN	1.45
PF02371	Transposase_20	1.45
PF00583	Acetyltransf_1	1.45
PF13432	TPR_16	1.45
PF04191	PEMT	0.72
PF04185	Phosphoesterase	0.72
PF03886	ABC_trans_aux	0.72
PF02368	Big_2	0.72
PF08327	AHSA1	0.72
PF01740	STAS	0.72
PF01694	Rhomboid	0.72
PF13431	TPR_17	0.72
PF05153	MIOX	0.72
PF13517	FG-GAP_3	0.72
PF12679	ABC2_membrane_2	0.72
PF01381	HTH_3	0.72
PF05448	AXE1	0.72
PF00069	Pkinase	0.72
PF02518	HATPase_c	0.72
PF08241	Methyltransf_11	0.72
PF08447	PAS_3	0.72
PF01042	Ribonuc_L-PSP	0.72
PF08238	Sel1	0.72
PF00756	Esterase	0.72
PF06941	NT5C	0.72
PF00873	ACR_tran	0.72
PF13561	adh_short_C2	0.72
PF06736	TMEM175	0.72
PF13439	Glyco_transf_4	0.72
PF13493	DUF4118	0.72
PF13620	CarboxypepD_reg	0.72
PF00903	Glyoxalase	0.72
PF04820	Trp_halogenase	0.72
PF13472	Lipase_GDSL_2	0.72
PF00440	TetR_N	0.72
PF00578	AhpC-TSA	0.72
PF15937	PrlF_antitoxin	0.72
PF07992	Pyr_redox_2	0.72
PF09369	MZB	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.90
COG0282	Acetate kinase	Energy production and conversion [C]	1.45
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.45
COG3426	Butyrate kinase	Energy production and conversion [C]	1.45
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.45
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.72
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.72
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.72
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.72
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.52 %
Unclassified	root	N/A	2.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.45 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.41 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.17 %
Unclassified	root	N/A	2.17 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.45 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.41 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.35 %
Unclassified	root	N/A	2.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.45 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.72 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.41 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.35 %
Unclassified	root	N/A	2.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.72 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.41 %
Unclassified	root	N/A	2.17 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.72 %
unclassified Ktedonobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → unclassified Ktedonobacterales	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.41 %
Unclassified	root	N/A	2.17 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.72 %
Ktedonobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → unclassified Ktedonobacterales → Ktedonobacterales bacterium	0.72 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.41 %
Unclassified	root	N/A	2.17 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.72 %
Ktedonobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → unclassified Ktedonobacterales → Ktedonobacterales bacterium	0.72 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1005886	All Organisms → cellular organisms → Bacteria	2160	Open in IMG/M
3300001867\|JGI12627J18819_10112005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1124	Open in IMG/M
3300005167\|Ga0066672_10036236	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300005332\|Ga0066388_100166732	All Organisms → cellular organisms → Bacteria	2798	Open in IMG/M
3300005332\|Ga0066388_105147181	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300005332\|Ga0066388_105303633	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300005436\|Ga0070713_100579456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1064	Open in IMG/M
3300005458\|Ga0070681_10005534	All Organisms → cellular organisms → Bacteria → Proteobacteria	12205	Open in IMG/M
3300005530\|Ga0070679_100221672	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300005533\|Ga0070734_10020679	All Organisms → cellular organisms → Bacteria	4353	Open in IMG/M
3300005764\|Ga0066903_107727672	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300005921\|Ga0070766_10359469	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300006052\|Ga0075029_100042366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2616	Open in IMG/M
3300006059\|Ga0075017_100172731	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300006102\|Ga0075015_100084057	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300006173\|Ga0070716_100840591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300006794\|Ga0066658_10032529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2128	Open in IMG/M
3300006871\|Ga0075434_100404646	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300006914\|Ga0075436_101476765	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300007982\|Ga0102924_1187320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300009137\|Ga0066709_100763259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1397	Open in IMG/M
3300009547\|Ga0116136_1034558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1512	Open in IMG/M
3300009547\|Ga0116136_1042201	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300009644\|Ga0116121_1001810	All Organisms → cellular organisms → Bacteria	8661	Open in IMG/M
3300009683\|Ga0116224_10163894	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300009762\|Ga0116130_1008642	All Organisms → cellular organisms → Bacteria	3780	Open in IMG/M
3300009792\|Ga0126374_10519861	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300010043\|Ga0126380_10062482	All Organisms → cellular organisms → Bacteria	2071	Open in IMG/M
3300010046\|Ga0126384_10255859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1418	Open in IMG/M
3300010046\|Ga0126384_10527171	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300010047\|Ga0126382_10181289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300010048\|Ga0126373_10030851	All Organisms → cellular organisms → Bacteria → Acidobacteria	4634	Open in IMG/M
3300010048\|Ga0126373_10291173	All Organisms → cellular organisms → Bacteria → Acidobacteria	1624	Open in IMG/M
3300010048\|Ga0126373_10781968	Not Available	1016	Open in IMG/M
3300010048\|Ga0126373_11182160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300010048\|Ga0126373_11395013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	766	Open in IMG/M
3300010048\|Ga0126373_11929471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300010048\|Ga0126373_12290731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300010359\|Ga0126376_10151459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1858	Open in IMG/M
3300010359\|Ga0126376_11834788	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300010359\|Ga0126376_12851886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300010360\|Ga0126372_10078003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2392	Open in IMG/M
3300010360\|Ga0126372_10557952	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300010360\|Ga0126372_12354752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300010361\|Ga0126378_10340909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1607	Open in IMG/M
3300010361\|Ga0126378_10769645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300010361\|Ga0126378_11846470	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300010361\|Ga0126378_12613561	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300010376\|Ga0126381_100253595	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300010376\|Ga0126381_100399329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1915	Open in IMG/M
3300010376\|Ga0126381_101191867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1100	Open in IMG/M
3300010376\|Ga0126381_101350180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300010376\|Ga0126381_104410191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300010398\|Ga0126383_13546463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300011269\|Ga0137392_11094433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300012096\|Ga0137389_11675488	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300012199\|Ga0137383_10101291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2092	Open in IMG/M
3300012357\|Ga0137384_10019017	All Organisms → cellular organisms → Bacteria	5596	Open in IMG/M
3300012361\|Ga0137360_10803365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300012948\|Ga0126375_10152894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300012948\|Ga0126375_11648002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300012960\|Ga0164301_11575815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300012971\|Ga0126369_11752268	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300012971\|Ga0126369_12156180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300014169\|Ga0181531_10310586	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300014654\|Ga0181525_10020325	All Organisms → cellular organisms → Bacteria → Acidobacteria	4131	Open in IMG/M
3300015371\|Ga0132258_10386800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3472	Open in IMG/M
3300015371\|Ga0132258_11861239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1516	Open in IMG/M
3300015371\|Ga0132258_12148275	All Organisms → cellular organisms → Bacteria → Acidobacteria	1403	Open in IMG/M
3300016294\|Ga0182041_10738783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300016319\|Ga0182033_10298958	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1328	Open in IMG/M
3300016341\|Ga0182035_10266955	Not Available	1389	Open in IMG/M
3300016445\|Ga0182038_11947692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300017924\|Ga0187820_1043159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1202	Open in IMG/M
3300017928\|Ga0187806_1064792	All Organisms → cellular organisms → Bacteria → Acidobacteria	1128	Open in IMG/M
3300017932\|Ga0187814_10285323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300017933\|Ga0187801_10372726	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300017947\|Ga0187785_10558190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300017970\|Ga0187783_10660334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	755	Open in IMG/M
3300017975\|Ga0187782_11259917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300018023\|Ga0187889_10316254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300018062\|Ga0187784_10042766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3664	Open in IMG/M
3300018086\|Ga0187769_10060670	All Organisms → cellular organisms → Bacteria → Acidobacteria	2648	Open in IMG/M
3300018090\|Ga0187770_11351502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300020579\|Ga0210407_10175088	All Organisms → cellular organisms → Bacteria → Acidobacteria	1661	Open in IMG/M
3300020580\|Ga0210403_10817154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300020581\|Ga0210399_10061978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3018	Open in IMG/M
3300020581\|Ga0210399_10329358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1275	Open in IMG/M
3300020583\|Ga0210401_10044428	All Organisms → cellular organisms → Bacteria → Acidobacteria	4201	Open in IMG/M
3300021170\|Ga0210400_10037573	All Organisms → cellular organisms → Bacteria	3755	Open in IMG/M
3300021178\|Ga0210408_10007267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9504	Open in IMG/M
3300021180\|Ga0210396_10164394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1990	Open in IMG/M
3300021180\|Ga0210396_10374575	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300021362\|Ga0213882_10365520	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300021402\|Ga0210385_10623498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300021404\|Ga0210389_10162695	All Organisms → cellular organisms → Bacteria → Acidobacteria	1733	Open in IMG/M
3300021433\|Ga0210391_10090982	All Organisms → cellular organisms → Bacteria	2407	Open in IMG/M
3300021559\|Ga0210409_10100560	All Organisms → cellular organisms → Bacteria → Acidobacteria	2667	Open in IMG/M
3300021560\|Ga0126371_10052067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → unclassified Ktedonobacterales → Ktedonobacterales bacterium	3921	Open in IMG/M
3300021560\|Ga0126371_10103231	All Organisms → cellular organisms → Bacteria	2845	Open in IMG/M
3300021560\|Ga0126371_11686724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300022724\|Ga0242665_10218600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300025939\|Ga0207665_10125394	All Organisms → cellular organisms → Bacteria → Acidobacteria	1818	Open in IMG/M
3300026317\|Ga0209154_1081587	All Organisms → cellular organisms → Bacteria → Acidobacteria	1394	Open in IMG/M
3300026532\|Ga0209160_1256906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300027537\|Ga0209419_1069408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300027576\|Ga0209003_1001072	All Organisms → cellular organisms → Bacteria → Acidobacteria	2899	Open in IMG/M
3300027874\|Ga0209465_10018412	All Organisms → cellular organisms → Bacteria	3198	Open in IMG/M
3300027879\|Ga0209169_10488297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300027898\|Ga0209067_10063501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1890	Open in IMG/M
3300027911\|Ga0209698_10055891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3434	Open in IMG/M
3300028746\|Ga0302233_10150687	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300028789\|Ga0302232_10669208	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300030043\|Ga0302306_10023776	All Organisms → cellular organisms → Bacteria → Acidobacteria	2522	Open in IMG/M
3300030617\|Ga0311356_12012227	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031546\|Ga0318538_10448405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300031573\|Ga0310915_10647875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300031708\|Ga0310686_108246529	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300031715\|Ga0307476_10767797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300031716\|Ga0310813_12247881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300031720\|Ga0307469_12296626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300031744\|Ga0306918_10466313	All Organisms → cellular organisms → Bacteria → Acidobacteria	988	Open in IMG/M
3300031823\|Ga0307478_10437511	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300031823\|Ga0307478_10962212	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300031962\|Ga0307479_10979643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	815	Open in IMG/M
3300032205\|Ga0307472_100319454	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300032261\|Ga0306920_101986167	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300032770\|Ga0335085_10002923	All Organisms → cellular organisms → Bacteria → Acidobacteria	30740	Open in IMG/M
3300032782\|Ga0335082_10116506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2627	Open in IMG/M
3300032828\|Ga0335080_10036888	All Organisms → cellular organisms → Bacteria	5367	Open in IMG/M
3300032828\|Ga0335080_11661525	Not Available	627	Open in IMG/M
3300032829\|Ga0335070_10102600	All Organisms → cellular organisms → Bacteria	2990	Open in IMG/M
3300032829\|Ga0335070_10108571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2890	Open in IMG/M
3300032829\|Ga0335070_10578183	All Organisms → cellular organisms → Bacteria → Acidobacteria	1058	Open in IMG/M
3300032892\|Ga0335081_12140808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300032897\|Ga0335071_10031538	All Organisms → cellular organisms → Bacteria → Acidobacteria	5273	Open in IMG/M
3300032898\|Ga0335072_10480669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1296	Open in IMG/M
3300033158\|Ga0335077_11384300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.38%
Host-Associated	Host-Associated	3.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.06%
Aquatic	Environmental → Aquatic	12.32%
Plants	Host-Associated → Plants	3.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.43%
Freshwater	Environmental → Aquatic → Freshwater	7.97%
Sediment	Environmental → Aquatic → Sediment	3.62%
Peat	Environmental → Terrestrial → Peat	2.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.32%
Loam	Environmental → Terrestrial → Soil → Loam	10.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.45%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.45%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.90%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.45%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10058863	3300000579	Forest Soil	MGHRDVKTAMRYQHPELEIVRAALDYRTPNSEAVV*
JGI12627J18819_101120053	3300001867	Forest Soil	MRTGNLAAEMRTMGHRDVKTAMHYQHPELQIVRAALDYRPSTSEAAA*
Ga0066672_100362362	3300005167	Soil	MRTGNLAAVMRTMGHHDVKTAMHYQHPELEIVRAALDYRPPNSEAVV*
Ga0066388_1001667326	3300005332	Tropical Forest Soil	MRTGNIAAVMKTMGHRDVKTAMHYQHPELEIVRAALDYRPPTTEAAA*
Ga0066388_1051471812	3300005332	Tropical Forest Soil	MRTGNLAAVMRTMGYRDVKTAMHYQHPELEIVRAALDYRPP
Ga0066388_1053036332	3300005332	Tropical Forest Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELELVRAALDYRPPSSETAA*
Ga0070713_1005794562	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVV*
Ga0070681_1000553410	3300005458	Corn Rhizosphere	VLMRTGNLAAVMRTMGHRDVQTAMHYQHLELEIVRAALDYRPPNSEAVV*
Ga0070679_1002216722	3300005530	Corn Rhizosphere	MRTGNLAAVMRTMGHRDVQTAMHYQHLELEIVRAALDYRPPNSEAVV*
Ga0070734_100206791	3300005533	Surface Soil	MRTGNLAAVMRTMGHRDVKTARHYQHPELEIVRAALDYRPPTSEQAA*
Ga0066903_1077276722	3300005764	Tropical Forest Soil	GNLAAVMRTMGHRDVKTAMHYQHPELEVVRAALDYRPPSTEVEA*
Ga0070766_103594691	3300005921	Soil	MRAGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDFRPPSSESAAGGRG*
Ga0075029_1000423662	3300006052	Watersheds	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTPEAAV*
Ga0075017_1001727313	3300006059	Watersheds	HDYGTRVLMRTGNLAAVMRTMGHRDVKTAMQYQHPELEIVRAALDYRPPTPEAAV*
Ga0075015_1000840573	3300006102	Watersheds	TRVLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTPEAAV*
Ga0070716_1008405912	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGHRDVKTAMHYQHPELEIVRAALDYRPPSTETAA*
Ga0066658_100325293	3300006794	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPSSEAVV*
Ga0075434_1004046461	3300006871	Populus Rhizosphere	DYGTRVLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRALSTESAA*
Ga0075436_1014767652	3300006914	Populus Rhizosphere	TRVLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAAVNYRPPNSEAVV*
Ga0102924_11873202	3300007982	Iron-Sulfur Acid Spring	MRSGNLAAVMRAMGHRDVKTAMHYHHPELEIVRAALDYRPLSTEAAA*
Ga0066709_1007632592	3300009137	Grasslands Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVG*
Ga0116136_10345581	3300009547	Peatland	RTGNLAAVMRTMGHRDVKTAMHYQHPELETVRAALDYRPPTTEAAA*
Ga0116136_10422014	3300009547	Peatland	RTGNLAAVMRTMGHRDVKTAMHYQHPELETVRAALDYRPPTPEAAV*
Ga0116121_100181012	3300009644	Peatland	VLMRTGNLAAVLRTMGHRDVKTAMHYQHPELEIVHAALDYRPPSSESAA*
Ga0116224_101638942	3300009683	Peatlands Soil	MGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAAA*
Ga0116130_10086421	3300009762	Peatland	VLRTMGHRDVKAAMHYKHSELEIVRAALDYRPPSSQSVA*
Ga0126374_105198611	3300009792	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSETAA*
Ga0126380_100624821	3300010043	Tropical Forest Soil	YGTRVLMRTGNLAAVMRTMAHRDVKTAMHYQHPELEIVRAALDYRPPNSETAA*
Ga0126384_102558592	3300010046	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNAEAAA*
Ga0126384_105271712	3300010046	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEVVRAALDYRPPSTEVAP*
Ga0126382_101812892	3300010047	Tropical Forest Soil	MRTGNLAAVMRTMAHRDVKTAMHYQHPELEIVRAALDYRPPNSETAA*
Ga0126373_100308515	3300010048	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRDPGSEAVA*
Ga0126373_102911732	3300010048	Tropical Forest Soil	MGHRDVKTAMHYQHPELEVVRAELDYRPSSTEVEV*
Ga0126373_107819681	3300010048	Tropical Forest Soil	TGNLAAVMRTMGHRDVKTAMHYQHPELEIVRGALDVREPGTEAVA*
Ga0126373_111821602	3300010048	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRLPSSETAA*
Ga0126373_113950132	3300010048	Tropical Forest Soil	MKTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSETAA*
Ga0126373_119294712	3300010048	Tropical Forest Soil	AAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSETAA*
Ga0126373_122907311	3300010048	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDFRSPSSETAA*
Ga0126376_101514595	3300010359	Tropical Forest Soil	MGHRDVKTAMHCQHPELEIVLAALDYRPPTPEAAA*
Ga0126376_118347882	3300010359	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPSSEAAA*
Ga0126376_128518861	3300010359	Tropical Forest Soil	MRIGNLAAVMRTMGHRGVKTAMHYQHPELEIVRAALDYRPPNSETAA*
Ga0126372_100780032	3300010360	Tropical Forest Soil	MRTGNLAAVLRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNAEAAA*
Ga0126372_105579521	3300010360	Tropical Forest Soil	MRTGNLAAVMRTMGYRDVKTAMHYQHPELEIVRAAIDYRPVNL*
Ga0126372_123547521	3300010360	Tropical Forest Soil	MRTGNLAAVMRTMGHPDVKTAMHYQHPELEIVRAALDYRPPTSETAA*
Ga0126378_103409091	3300010361	Tropical Forest Soil	MGHRDVKTAMLYQHPELEIVRAALDYRPPSPELAA*
Ga0126378_107696452	3300010361	Tropical Forest Soil	MRTMGHRDVKTAMHYQHPELEVVRAALDYRPSSTEVEV*
Ga0126378_118464701	3300010361	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYHSPSTEGAA*
Ga0126378_126135611	3300010361	Tropical Forest Soil	MRTGNLAAVMKTMGHRDVKTAMHYQHPELETVRAALDYRPP
Ga0126381_1002535955	3300010376	Tropical Forest Soil	MGHRDVKTAMHYQHPELEIVRVALDYRPPTTEAAVVE*
Ga0126381_1003993291	3300010376	Tropical Forest Soil	VMKTMGHRDVKTAMHYQHPELEIVRAALDDRPTTPKQRRSK*
Ga0126381_1011918672	3300010376	Tropical Forest Soil	MRTGNLAAVLRTMGHRDVKTAMHYQHSELEIVRAALDYRGPPSEAVA*
Ga0126381_1013501801	3300010376	Tropical Forest Soil	AVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNAEAAA*
Ga0126381_1044101912	3300010376	Tropical Forest Soil	MKTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSET
Ga0126383_135464632	3300010398	Tropical Forest Soil	MRTGNLAAVLRTMGHRDVKTAMHYRHSELEIVRAALDYRGPPSEAVA*
Ga0137392_110944332	3300011269	Vadose Zone Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPISNVAA*
Ga0137389_116754881	3300012096	Vadose Zone Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPISKVAA*
Ga0137383_101012914	3300012199	Vadose Zone Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPQETEAAA*
Ga0137384_100190179	3300012357	Vadose Zone Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPQGTEAAA*
Ga0137360_108033652	3300012361	Vadose Zone Soil	MRTGNLAAVRKTMGHRDVKTAMHYQHPELEIVRSAFSYVIVH*
Ga0126375_101528942	3300012948	Tropical Forest Soil	VLRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNAEAAA*
Ga0126375_116480021	3300012948	Tropical Forest Soil	DYGTRVLMRTGNLAAVMKTMRHRDVKTAMHYQHPELELVRAALDYRPPSSETAA*
Ga0164301_115758152	3300012960	Soil	MRTGNLADVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVV*
Ga0126369_117522681	3300012971	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNAEAAV*
Ga0126369_121561802	3300012971	Tropical Forest Soil	MRTGNLAAVVRTMGHRDVKTAMHYQHPELEVVRAALDYRPSSTEVEV*
Ga0181531_103105861	3300014169	Bog	MRTMGHRDIKTAMHYQHPEVETARAALDYRPPTTDAAA*
Ga0181525_100203254	3300014654	Bog	MGHRDIKTAMHYQHPEVETARAALDYRPPTTDAAA*
Ga0132258_103868005	3300015371	Arabidopsis Rhizosphere	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPSSSEEAA*
Ga0132258_118612391	3300015371	Arabidopsis Rhizosphere	TGKLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDYRSPSTEVVA*
Ga0132258_121482751	3300015371	Arabidopsis Rhizosphere	MRTGNLAAVMRTMEHRDVKTAMHYQHPELEVVRAALDHRPPSTEAEA*
Ga0182041_107387832	3300016294	Soil	MGHRDVKTAMHYQHPELEIVRAALDYRPPASEASA
Ga0182033_102989581	3300016319	Soil	MRTMGHRDVKTAMHYQHPELEIVRAALDYRPPASEASA
Ga0182035_102669553	3300016341	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYSPSTSEAAA
Ga0182038_119476921	3300016445	Soil	AAQPRGEAVMKTMGHRDVKTAMHYQHPELEIVRAALDYRLPRSETAA
Ga0187820_10431592	3300017924	Freshwater Sediment	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYHPPTSEQAV
Ga0187806_10647921	3300017928	Freshwater Sediment	LMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPSPEVAA
Ga0187814_102853231	3300017932	Freshwater Sediment	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTTEAAA
Ga0187801_103727262	3300017933	Freshwater Sediment	AAVMRTMGHRDVKTAMHYQHPELETVRAALDYRPPTTEAAA
Ga0187785_105581901	3300017947	Tropical Peatland	TMGHRDVKTAMHYQHPELEIVRAALDYRPPTTEAAG
Ga0187783_106603341	3300017970	Tropical Peatland	MGHRDVKTAMHYQHPELEIVRAALDYRPPTSEAAA
Ga0187782_112599172	3300017975	Tropical Peatland	VMRTMGHRDVKTAMHYQHPELETVRAALDYRPPTTEAAA
Ga0187889_103162541	3300018023	Peatland	DYGTRVLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTPEAAV
Ga0187784_100427663	3300018062	Tropical Peatland	RTGNLAAVMRTMGHRDVKTAMHYQHPELETVRAALDYRPPTTEAAA
Ga0187769_100606702	3300018086	Tropical Peatland	MRTGNLAAVMKTMGHRDVKTAMHYQHPELVIVRAALDYRPPTTEAAA
Ga0187770_113515021	3300018090	Tropical Peatland	MKTMGHRDVKTAMHYQHPELEIVRAALDFRPPTSETAA
Ga0210407_101750881	3300020579	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELVIVRAALDYRPPNSEAVV
Ga0210403_108171541	3300020580	Soil	VLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYGPPTSDAAA
Ga0210399_100619783	3300020581	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQQPELEIVRAALDYRPPSSKSAA
Ga0210399_103293583	3300020581	Soil	GNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0210401_100444286	3300020583	Soil	MGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0210400_100375733	3300021170	Soil	MMGHRDVKAAMNDQHPELEIVRAALDYRLPISNVAG
Ga0210408_100072676	3300021178	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYGPPTSDAAA
Ga0210396_101643945	3300021180	Soil	MRTGNLAAVMRTMGHRDVKSAMHYQQPELEIVRAALDYRPPSSKSAA
Ga0210396_103745751	3300021180	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0213882_103655201	3300021362	Exposed Rock	VLIRTGNLAAVMRTMGHRDVKTAMCYQHPELETVRAALDSRPPTTEAAA
Ga0210385_106234982	3300021402	Soil	AVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0210389_101626953	3300021404	Soil	YGTRVLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0210391_100909822	3300021433	Soil	MRAGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDFRPPSSESAAGGRG
Ga0210409_101005604	3300021559	Soil	MRTGNLAAVMRTMGHRDLKTAMHYQHPELEIVRAALDYGPPTSDAAA
Ga0126371_100520671	3300021560	Tropical Forest Soil	MRTGNLAAVMKTMGHCDVKTAMHYQHPELEIVRAALDYRPPSTEVVA
Ga0126371_101032311	3300021560	Tropical Forest Soil	MRTGNLAAVMRTMGYRDVKTAMHYQHPELEIVRAAIDYRPVNL
Ga0126371_116867242	3300021560	Tropical Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNTETAS
Ga0242665_102186001	3300022724	Soil	MGHRDVKTAMHYQHPELEIVRAALDYRPPSSKSAA
Ga0207665_101253941	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MGHRDVKTAMHYQHPELEIVRAALDYRPPSTETAA
Ga0209154_10815873	3300026317	Soil	MRTGNLAAVMRTMGHHDVKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0209160_12569061	3300026532	Soil	RTMGHHDVKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0209419_10694082	3300027537	Forest Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSEAAA
Ga0209003_10010723	3300027576	Forest Soil	MRTGNLAAVMKTMGHREVKTAMHYQHPELDVVRAALDYR
Ga0209465_100184121	3300027874	Tropical Forest Soil	MKTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSETAA
Ga0209169_104882971	3300027879	Soil	NLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0209067_100635011	3300027898	Watersheds	DYGTPVLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSQVVV
Ga0209698_100558913	3300027911	Watersheds	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTPEAAV
Ga0302233_101506872	3300028746	Palsa	MRTGNLAAVMRTMGHRDVKTAMHNQHPELETARAALDYRPPTTEAAA
Ga0302232_106692081	3300028789	Palsa	MGHRDIKTAMHYQHPEVETARAALDYRPPTTDAAA
Ga0302306_100237762	3300030043	Palsa	MRTGNLAAVMRTMGHRDVKTAMHNQHPELETARAALDYRPPTTDAAA
Ga0311356_120122272	3300030617	Palsa	MRTMGHRDIKTAMHYQHPEVETARAALDYRPPTTDAAA
Ga0318538_104484051	3300031546	Soil	MGQRDVKTAMHYQHPELEIVRAALDYRPPASEASA
Ga0310915_106478752	3300031573	Soil	MKTMGHRDVKTAMHYQHPELEIVRAALDYRLPRSETAA
Ga0310686_1082465292	3300031708	Soil	MGTRVLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRTALDYRPLSGESAA
Ga0307476_107677972	3300031715	Hardwood Forest Soil	TMGHRDVKTAMHYQHPELEIVRAALDYRPPVSKVAA
Ga0310813_122478812	3300031716	Soil	MRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTPEAAA
Ga0307469_122966261	3300031720	Hardwood Forest Soil	VLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSGAAA
Ga0306918_104663132	3300031744	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPASEASA
Ga0307478_104375111	3300031823	Hardwood Forest Soil	QSHGPYGTRVLMRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPISKVAA
Ga0307478_109622122	3300031823	Hardwood Forest Soil	MRTGNLAAVMRTMGHRDVKTAMNYQHPELEIVRAALDFRAPASEASA
Ga0307479_109796432	3300031962	Hardwood Forest Soil	VMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0307472_1003194541	3300032205	Hardwood Forest Soil	RTMGHRDVKTAMHYQHPELEIVRAALDYHPQTSKEAA
Ga0306920_1019861672	3300032261	Soil	MGHRDVNTAMHYQHPELEIVRAALDYHPQAVKQRHSEKGLR
Ga0335085_100029239	3300032770	Soil	MRSGNLAAVMKTMGHCDTKTAMHYQHPELEIVRAALDYRLPTSEAAA
Ga0335082_101165061	3300032782	Soil	MRIGNLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSEAAA
Ga0335080_100368881	3300032828	Soil	AAVMKTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSEAAA
Ga0335080_116615252	3300032828	Soil	LMRTGNLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSGAAA
Ga0335070_101026001	3300032829	Soil	TRVLMRTGNLAAVMRTMGHRALKTAMHYQHPELEIVRAALDYRPPNSEAVV
Ga0335070_101085713	3300032829	Soil	VMRTMGHRDVKTAMHYQHPELEIVRAALDYRPANPEVAA
Ga0335070_105781831	3300032829	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEVVV
Ga0335081_121408082	3300032892	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELETVRAALDYRPPTTEAAA
Ga0335071_100315381	3300032897	Soil	MRTGNLAAVMRTMGHRDVKTAMHYQHPELEIVRAALDYRPPNSEV
Ga0335072_104806692	3300032898	Soil	MGHRDVKTAMHYQHPELEIVRAALDYRPPTTEAAE
Ga0335077_113843001	3300033158	Soil	DYGTRVLMRTGNLAAVMKTMGHRDVKTAMHYQHPELEIVRAALDYRPPTSEAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055982

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences