Metagenome / Metatranscriptome Family F055971

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055971
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	49 residues
Representative Sequence	LAWADGGYHGFSVDDGTWSAISSAGEVLTGDTPDSLTRKIRAHWQAMQ
Number of Associated Samples	97
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.84 %
% of genes near scaffold ends (potentially truncated)	89.13 %
% of genes from short scaffolds (< 2000 bps)	90.58 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.174 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (21.014 % of family members)
Environment Ontology (ENVO)	Unclassified (21.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.899 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.74% β-sheet: 21.05% Coil/Unstructured: 59.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF04672	Methyltransf_19	23.91
PF01609	DDE_Tnp_1	1.45
PF13560	HTH_31	1.45
PF07963	N_methyl	0.72
PF00857	Isochorismatase	0.72
PF07690	MFS_1	0.72
PF00753	Lactamase_B	0.72
PF00436	SSB	0.72
PF00005	ABC_tran	0.72
PF00589	Phage_integrase	0.72
PF04978	DUF664	0.72
PF13581	HATPase_c_2	0.72
PF03176	MMPL	0.72
PF13401	AAA_22	0.72
PF13588	HSDR_N_2	0.72
PF00027	cNMP_binding	0.72
PF12680	SnoaL_2	0.72
PF00583	Acetyltransf_1	0.72
PF03795	YCII	0.72
PF04041	Glyco_hydro_130	0.72
PF00106	adh_short	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.45
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.45
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.45
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.45
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.45
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.45
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.72
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.72
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.72
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.72
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.72
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
All Organisms	root	All Organisms	47.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
cellular organisms	root	All Organisms → cellular organisms	47.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39.13 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	6.52 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.07 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.17 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.45 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6.52 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.17 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.45 %
unclassified Frankiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → unclassified Frankiales	0.72 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.72 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.72 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	6.52 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.17 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.72 %
Frankineae bacterium MT45	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → unclassified Frankiales → Frankineae bacterium MT45	0.72 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.72 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.72 %
Herbidospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora	0.72 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.17 %
unclassified Streptacidiphilus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → unclassified Streptacidiphilus	0.72 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.72 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.72 %
Frankineae bacterium MT45	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → unclassified Frankiales → Frankineae bacterium MT45	0.72 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.72 %
Herbidospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora	0.72 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.17 %
Streptacidiphilus sp. PB12-B1b	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → unclassified Streptacidiphilus → Streptacidiphilus sp. PB12-B1b	0.72 %
Pseudonocardia sp. EV170527-09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. EV170527-09	0.72 %
Streptomyces sp. T1317-0309	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. T1317-0309	0.72 %
Frankineae bacterium MT45	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → unclassified Frankiales → Frankineae bacterium MT45	0.72 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.72 %
Herbidospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora	0.72 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_104605939	Not Available	519	Open in IMG/M
3300004152\|Ga0062386_101505912	Not Available	561	Open in IMG/M
3300004635\|Ga0062388_100701890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	944	Open in IMG/M
3300005435\|Ga0070714_100253991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1626	Open in IMG/M
3300005435\|Ga0070714_100528280	Not Available	1128	Open in IMG/M
3300005435\|Ga0070714_102136233	Not Available	545	Open in IMG/M
3300005439\|Ga0070711_100013138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5193	Open in IMG/M
3300005439\|Ga0070711_101656122	Not Available	560	Open in IMG/M
3300005471\|Ga0070698_100204182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1911	Open in IMG/M
3300005471\|Ga0070698_100449854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1224	Open in IMG/M
3300005518\|Ga0070699_101669709	Not Available	583	Open in IMG/M
3300005537\|Ga0070730_10077395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. T1317-0309	2335	Open in IMG/M
3300005591\|Ga0070761_10508222	Not Available	744	Open in IMG/M
3300005618\|Ga0068864_100417536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1278	Open in IMG/M
3300005843\|Ga0068860_100767650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	976	Open in IMG/M
3300006028\|Ga0070717_10333392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1353	Open in IMG/M
3300006173\|Ga0070716_101398601	Not Available	569	Open in IMG/M
3300006579\|Ga0074054_11667293	Not Available	508	Open in IMG/M
3300006806\|Ga0079220_11749498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	545	Open in IMG/M
3300006953\|Ga0074063_13405637	Not Available	616	Open in IMG/M
3300007255\|Ga0099791_10624737	Not Available	528	Open in IMG/M
3300007982\|Ga0102924_1099140	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300009012\|Ga0066710_102914805	Not Available	670	Open in IMG/M
3300009029\|Ga0066793_10445404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	742	Open in IMG/M
3300009088\|Ga0099830_10611692	Not Available	894	Open in IMG/M
3300009143\|Ga0099792_10895901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	587	Open in IMG/M
3300009522\|Ga0116218_1502041	Not Available	541	Open in IMG/M
3300009672\|Ga0116215_1168917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	969	Open in IMG/M
3300009672\|Ga0116215_1527161	Not Available	510	Open in IMG/M
3300009698\|Ga0116216_10056685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2414	Open in IMG/M
3300009698\|Ga0116216_10153469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1416	Open in IMG/M
3300009698\|Ga0116216_10801481	Not Available	565	Open in IMG/M
3300009700\|Ga0116217_10274933	Not Available	1088	Open in IMG/M
3300009700\|Ga0116217_10317339	Not Available	999	Open in IMG/M
3300009700\|Ga0116217_10502232	Not Available	762	Open in IMG/M
3300009700\|Ga0116217_10799080	Not Available	581	Open in IMG/M
3300009824\|Ga0116219_10534330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300010341\|Ga0074045_10318268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1018	Open in IMG/M
3300010373\|Ga0134128_12443676	Not Available	576	Open in IMG/M
3300010379\|Ga0136449_100360354	All Organisms → cellular organisms → Bacteria	2606	Open in IMG/M
3300010379\|Ga0136449_101127995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1244	Open in IMG/M
3300010379\|Ga0136449_101414180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1073	Open in IMG/M
3300010379\|Ga0136449_101541765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1014	Open in IMG/M
3300010379\|Ga0136449_102232311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300010379\|Ga0136449_103716177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300010880\|Ga0126350_10573238	Not Available	588	Open in IMG/M
3300010880\|Ga0126350_10771599	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300011120\|Ga0150983_10476457	Not Available	621	Open in IMG/M
3300012096\|Ga0137389_10968078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300012096\|Ga0137389_11601893	Not Available	547	Open in IMG/M
3300012199\|Ga0137383_10162458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1636	Open in IMG/M
3300012199\|Ga0137383_10651880	Not Available	770	Open in IMG/M
3300012203\|Ga0137399_11441193	Not Available	575	Open in IMG/M
3300012206\|Ga0137380_11345807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300012208\|Ga0137376_10559118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	991	Open in IMG/M
3300012209\|Ga0137379_10052853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3910	Open in IMG/M
3300012210\|Ga0137378_10025361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5225	Open in IMG/M
3300012350\|Ga0137372_10193449	Not Available	1633	Open in IMG/M
3300012351\|Ga0137386_10325264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300012355\|Ga0137369_10778513	Not Available	654	Open in IMG/M
3300012360\|Ga0137375_11242647	Not Available	567	Open in IMG/M
3300012469\|Ga0150984_123074211	Not Available	509	Open in IMG/M
3300012515\|Ga0157338_1009988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300012929\|Ga0137404_10196599	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300012929\|Ga0137404_11655820	Not Available	594	Open in IMG/M
3300016341\|Ga0182035_11059913	Not Available	720	Open in IMG/M
3300016445\|Ga0182038_10907848	Not Available	776	Open in IMG/M
3300017822\|Ga0187802_10263361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300017926\|Ga0187807_1136055	Not Available	782	Open in IMG/M
3300017973\|Ga0187780_11368193	Not Available	521	Open in IMG/M
3300017974\|Ga0187777_10936919	Not Available	624	Open in IMG/M
3300018044\|Ga0187890_10322966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	866	Open in IMG/M
3300018085\|Ga0187772_11206616	Not Available	557	Open in IMG/M
3300018085\|Ga0187772_11211291	Not Available	556	Open in IMG/M
3300018468\|Ga0066662_11486364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	704	Open in IMG/M
3300020582\|Ga0210395_10430559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	992	Open in IMG/M
3300020582\|Ga0210395_11027994	Not Available	610	Open in IMG/M
3300021171\|Ga0210405_10190687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1625	Open in IMG/M
3300021178\|Ga0210408_10217504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1520	Open in IMG/M
3300021178\|Ga0210408_10273164	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300021178\|Ga0210408_11249809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300021180\|Ga0210396_10660949	Not Available	905	Open in IMG/M
3300021374\|Ga0213881_10182168	Not Available	925	Open in IMG/M
3300021374\|Ga0213881_10189825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → unclassified Streptacidiphilus → Streptacidiphilus sp. PB12-B1b	906	Open in IMG/M
3300021401\|Ga0210393_11677684	Not Available	503	Open in IMG/M
3300021401\|Ga0210393_11678214	Not Available	503	Open in IMG/M
3300021402\|Ga0210385_10822467	Not Available	713	Open in IMG/M
3300021432\|Ga0210384_11088312	Not Available	702	Open in IMG/M
3300021478\|Ga0210402_10311246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1459	Open in IMG/M
3300021478\|Ga0210402_11418947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300024323\|Ga0247666_1127871	Not Available	505	Open in IMG/M
3300025898\|Ga0207692_10167562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300025898\|Ga0207692_11083413	Not Available	530	Open in IMG/M
3300025910\|Ga0207684_10083447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2721	Open in IMG/M
3300025910\|Ga0207684_10417874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1152	Open in IMG/M
3300025916\|Ga0207663_10907736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	704	Open in IMG/M
3300025939\|Ga0207665_10782493	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300025939\|Ga0207665_11041344	Not Available	652	Open in IMG/M
3300026551\|Ga0209648_10105526	Not Available	2301	Open in IMG/M
3300026551\|Ga0209648_10330672	Not Available	1065	Open in IMG/M
3300027854\|Ga0209517_10710956	Not Available	516	Open in IMG/M
3300027857\|Ga0209166_10406964	Not Available	706	Open in IMG/M
3300027905\|Ga0209415_10569814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	849	Open in IMG/M
3300027911\|Ga0209698_11254374	Not Available	544	Open in IMG/M
3300028381\|Ga0268264_10678311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1022	Open in IMG/M
3300028768\|Ga0307280_10046146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1350	Open in IMG/M
3300030490\|Ga0302184_10342703	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300030659\|Ga0316363_10014246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → unclassified Frankiales → Frankineae bacterium MT45	4559	Open in IMG/M
3300030659\|Ga0316363_10084452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1434	Open in IMG/M
3300030707\|Ga0310038_10413930	Not Available	584	Open in IMG/M
3300030707\|Ga0310038_10425519	Not Available	573	Open in IMG/M
3300031236\|Ga0302324_103474247	Not Available	512	Open in IMG/M
3300031543\|Ga0318516_10818227	Not Available	526	Open in IMG/M
3300031564\|Ga0318573_10696797	Not Available	546	Open in IMG/M
3300031719\|Ga0306917_11439630	Not Available	531	Open in IMG/M
3300031819\|Ga0318568_11049707	Not Available	503	Open in IMG/M
3300031821\|Ga0318567_10313228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300031823\|Ga0307478_10812013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	783	Open in IMG/M
3300031823\|Ga0307478_11009585	Not Available	695	Open in IMG/M
3300031896\|Ga0318551_10642409	Not Available	613	Open in IMG/M
3300031962\|Ga0307479_10919484	Not Available	846	Open in IMG/M
3300032076\|Ga0306924_10572052	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300032160\|Ga0311301_10162766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3978	Open in IMG/M
3300032160\|Ga0311301_10319432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2465	Open in IMG/M
3300032160\|Ga0311301_10533369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1724	Open in IMG/M
3300032160\|Ga0311301_10868546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1222	Open in IMG/M
3300032160\|Ga0311301_11083179	Not Available	1045	Open in IMG/M
3300032261\|Ga0306920_101609276	Not Available	924	Open in IMG/M
3300032261\|Ga0306920_103582522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora	572	Open in IMG/M
3300032782\|Ga0335082_11632152	Not Available	518	Open in IMG/M
3300032805\|Ga0335078_12739889	Not Available	501	Open in IMG/M
3300032828\|Ga0335080_11986179	Not Available	564	Open in IMG/M
3300032892\|Ga0335081_10182341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. EV170527-09	2938	Open in IMG/M
3300032892\|Ga0335081_10713618	Not Available	1214	Open in IMG/M
3300032892\|Ga0335081_11060731	Not Available	938	Open in IMG/M
3300033004\|Ga0335084_12243304	Not Available	528	Open in IMG/M
3300033158\|Ga0335077_10534427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1234	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.38%
Host-Associated	Host-Associated	3.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.58%
Aquatic	Environmental → Aquatic	5.80%
Plants	Host-Associated → Plants	3.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.68%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.90%
Peat	Environmental → Terrestrial → Peat	1.45%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Sediment	Environmental → Aquatic → Sediment	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.77%
Loam	Environmental → Terrestrial → Soil → Loam	13.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.45%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.45%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	21.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.45%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.45%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1046059392	3300004092	Bog Forest Soil	ELAWSEGGYHGFTAAGGTWYAITSAGEVLTGATPDELASAIRAHWQAMRG*
Ga0062386_1015059121	3300004152	Bog Forest Soil	ALAELELAWPEGGYHGFTAAGGTWCAITSAGEVLTGATPDELASAIRAHWQAMRG*
Ga0062388_1007018903	3300004635	Bog Forest Soil	FTAAGGTWCAVTSAGEVLTGATPDDLVRAIRAHWQAIRG*
Ga0070714_1002539911	3300005435	Agricultural Soil	EDAALAALELTWSDAGYHAFSADGGPWCAVSSAGEVLTGVTPDELDRKIRAHWEAMQ*
Ga0070714_1005282805	3300005435	Agricultural Soil	ALAELELAWADGGYHGFSANHGLWSAVSSAGEVLTGGTPDALDRAIRAHWQAKQ*
Ga0070714_1021362331	3300005435	Agricultural Soil	NAALAELELAWADGGYHGFSVDDGTWSAISSAGEVLTGDTPDALTRKIRAHWQAMQ*
Ga0070711_1000131381	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	WSDAGYHAFSADGGRWCAVSSAGEVLIGVTPDELDRKIRTHWEAMQ*
Ga0070711_1016561222	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DGGYHGFSANHGLWSAVSSAGEVLTGGTPDALDRAIRAHWQAKQ*
Ga0070698_1002041822	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSAARAELETAWAADGYHGFSLHHGTWSAISSAGKVLTGAPPDEREREIPAHWQAM*
Ga0070698_1004498541	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EDHALAELELAWADGGYHGFSADGGMWSAISSAGDVLTGDTPDALTRKIRAHWQAMQ*
Ga0070699_1016697092	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GGYHGFSADGGTWCAISSAGEVLTGGTPDALARAIRAHWQAMQ*
Ga0070730_100773953	3300005537	Surface Soil	QMHQDAALAELELAWAAEGYHGFSAGGGTWFAVTSAGEVLTGSTPDELSWAIRAHWQAMQ
Ga0070761_105082221	3300005591	Soil	GLSADDGTWSAVSSAGDVLTGDTPDALATRIRAHWQARQ*
Ga0068864_1004175363	3300005618	Switchgrass Rhizosphere	VDEDRALAELKLAWSDGGYHGFTVEGGNWGAISSAGEVLTGGTPDALNRAIREHWQALRG
Ga0068860_1007676501	3300005843	Switchgrass Rhizosphere	SDGGYHGFTVEGGNWGAISSAGEVLTGGTPDALNRAIREHWQALRG*
Ga0070717_103333922	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VDGGTWAAISSAGEVLTAGTPDALARAIRAHWQAMQ*
Ga0070716_1013986011	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	YHGFTVEGGTWGAISSAGEVLTGGTPDTLNRAIRAHWQALRG*
Ga0074054_116672932	3300006579	Soil	WADGGYHAFSADGGTWCAISSAGEVLTGSTPDELDQKIRAHWQAMQ*
Ga0079220_117494981	3300006806	Agricultural Soil	DENAALAELELAWADGGYHGFSVDDETWSAISSAGEVLTGATPDSLTRKIRAHWQAMQ*
Ga0074063_134056373	3300006953	Soil	EDRALAELELAWSEGGYHGFTVEGGTWGAISSAGEVLTGGTPDALNRAISAHWQALRG*
Ga0099791_106247371	3300007255	Vadose Zone Soil	LAWADGGYHGFSVDDGTWSAISSAGEVLTGDTPDSLTRKIRAHWQAMQ*
Ga0102924_10991402	3300007982	Iron-Sulfur Acid Spring	MKDSALAALEEAWAEGGYHAFSADHAIWSAIGSAGEVLTGSTPDELDRKIRAHWQAMQ*
Ga0066710_1029148053	3300009012	Grasslands Soil	DQDAALAELELAWADGGYHGFTADAGTWAAITSAGEVLTGATPDALARAIRAHWQAMQ
Ga0066793_104454041	3300009029	Prmafrost Soil	LAELELAWADGGYHGFCAGGGTWSAISSAGDVLTGETPDALNRKIRAHWQAMQ*
Ga0099830_106116921	3300009088	Vadose Zone Soil	EIELAWDGGGYHGFSADGGTWCAITSAGDVLTGDTPDALARAIRAHWQAMQ*
Ga0099792_108959013	3300009143	Vadose Zone Soil	DGGYHGFSADGGTWCAVSSAGEVLTGGTPDALDRAIRAHWQAMQ*
Ga0116218_15020411	3300009522	Peatlands Soil	LAELELAWTDGGYHGFSVDDGLWSAITSAGDVLTGDTPDALTRKIRAHWQVMQ*
Ga0116215_11689171	3300009672	Peatlands Soil	ETRAEGGYHAFSADHGTWPAIGGAGEVLTGATLDELDRKIRAHWQETQ*
Ga0116215_15271612	3300009672	Peatlands Soil	RVLAELELTWAGSGYHGFSADGGTWSAITSAGDVLTGDTPDALDRGIRAHWQMMQ*
Ga0116216_100566852	3300009698	Peatlands Soil	VDEDAALAALEDVWATGGYHAFGADHGTWSAISSSGDVLTGQTPDELDRAIRAHWLAMQ*
Ga0116216_101534694	3300009698	Peatlands Soil	AELELTWAGGGYHGFSADGGTWSAISSAGDVLTGDTPDALAPRIRAHWQAMQ*
Ga0116216_108014812	3300009698	Peatlands Soil	EAWADGGYHAFGVDHGTWSAISSAGPGLTGSTPDELDRKIRAHWQGDAMTRVGR*
Ga0116217_102749332	3300009700	Peatlands Soil	AALAELELAWTDGGYHGFSVDDETWSAISSAGEVLIGDTPDALTRKIRAHWQAMQ*
Ga0116217_103173391	3300009700	Peatlands Soil	GGYHAFGVDHGTWSAISSAGPVLTGSTPDELDRKIRAHWQGDAMTRVGR*
Ga0116217_105022323	3300009700	Peatlands Soil	RALAELELAWTDGGYHGFSVDDGLWSAITSAGDVLTGDTPDALTRKIRAHWQVMQ*
Ga0116217_107990802	3300009700	Peatlands Soil	ALAELELAWADGGYHGFSADGGTWCAVSNAGDVLTGGTPDALNRAIRAHWQAMQ*
Ga0116219_105343301	3300009824	Peatlands Soil	AALAALEQAWADGGYHAFGAGHGTWPAIGSAGEVRTGATPDELDRKIRAHWQETQ*
Ga0074045_103182683	3300010341	Bog Forest Soil	GGYHGFTAAGGTWCAITSAGEVLTGATPDELASAIRAHWQAMRG*
Ga0134128_124436763	3300010373	Terrestrial Soil	SADGGLWSAISSAGDVLTGDTPNALTQKIRAHWQAMQ*
Ga0136449_1003603541	3300010379	Peatlands Soil	ADGGYHGFSADDGLWSAITSAGDVLTGDTPDALTRKIKAHWQAMR*
Ga0136449_1011279952	3300010379	Peatlands Soil	LNWHGPTGGYHGFSAGDGTWSAISSAGEVLTGDTPDALIRKIRAHWQAMQ*
Ga0136449_1014141803	3300010379	Peatlands Soil	LKLAWASGGYHGFSVGDGIWPAISSAGQVLTGSTPDELDRKIRAHWQAMQ*
Ga0136449_1015417652	3300010379	Peatlands Soil	GYHGFSAYGGTWSAISSAGDVLTGDTPDALNQKIRAHWQALQ*
Ga0136449_1019246061	3300010379	Peatlands Soil	GGTWCAISSAGDVLTGATPDALNRAIRASRQAMQ*
Ga0136449_1022323112	3300010379	Peatlands Soil	DGTWSAISSAGEVLTGDTPDSLTRKIRAHWQAMQ*
Ga0136449_1037161771	3300010379	Peatlands Soil	LELTWAAGGYHGFSAEGGTWAAITSAGDVLTGDTPDALNRKIWAYWQAMQ*
Ga0126350_105732381	3300010880	Boreal Forest Soil	LATLELAWGDGGYHGFSADGGTWCAVSSAGDVLTGATVDELNRAIRAHWQGWQ*
Ga0126350_107715991	3300010880	Boreal Forest Soil	KPALAELELAWAGGGYHGFSADGGTWSAVSSAGEVLTGATVDELDRAIRAHWQAMQ*
Ga0150983_104764571	3300011120	Forest Soil	MAQLAWSDGGYHGFTVEGGTWFAINSAGEVRAGGTPDALNRTIQAHWQATR
Ga0137389_109680783	3300012096	Vadose Zone Soil	WADGGYHGFSADGGLWSAISSAGDVLTGDTPDALTQKIRAHWQAMQ*
Ga0137389_116018932	3300012096	Vadose Zone Soil	FCADGGTWSAITSAGDVLTGGTPDALNLAIRAHWAREATR*
Ga0137383_101624581	3300012199	Vadose Zone Soil	YDGYHGFGAEGGQWSAISSAGEVLTGDTPDALTRKIRAYWQAMQ*
Ga0137383_106518802	3300012199	Vadose Zone Soil	AEIELAWADGGYHGFSADGGTWCSVSSAGEVLTGATPDALARAIRAHWQAMQ*
Ga0137399_114411932	3300012203	Vadose Zone Soil	VFAVDEEAALEEAWADGGYHAFGVDDELWSVISSAGEVLTGSTPDELDRKIRAHWQAMQ*
Ga0137380_113458071	3300012206	Vadose Zone Soil	VRPAFFPTVADGGYHAFSAYGGTWCAISSAGDVLTGDTPDALARAIRAHWQAMQ*
Ga0137376_105591181	3300012208	Vadose Zone Soil	YHGFSVDDETWSAISSAGEVLIGDTPDALTRKIRAHWQAMQ*
Ga0137379_100528531	3300012209	Vadose Zone Soil	AALAELELAWSDGGYHAFSPGGGHWCAVSSAGEVLTGATPDALDRAIRAHWQAMQ*
Ga0137378_100253616	3300012210	Vadose Zone Soil	ADGGYHAFSADGGTWCAVSSAGEMLTGATPDALDRAIRAHWQAMQ*
Ga0137372_101934491	3300012350	Vadose Zone Soil	GGTWYAISSAGEVLTGTTPDELARAIRAHWQAMQ*
Ga0137386_103252643	3300012351	Vadose Zone Soil	GFGVDDGTWTAISSAGDVLTGDTPDALNRAITAYWQARQ*
Ga0137369_107785132	3300012355	Vadose Zone Soil	LAALEDLWTAGGYHAFSVDDGTWSAISNAGEILIGSTPDELDRKIRAHWQEMQ*
Ga0137375_112426473	3300012360	Vadose Zone Soil	GGYHAFSAGGGHWCAVSSAGEVLAGDTPDALDRAIRAHWQAMQ*
Ga0150984_1230742112	3300012469	Avena Fatua Rhizosphere	YRAFSAGGGLWYAVSSAGEVLTGDTPDALDRAIRAHWAAWQ*
Ga0157338_10099883	3300012515	Arabidopsis Rhizosphere	ALAALEEAWADGCHHAFSVDHGTWSAVSSAGEVLTGATPDELDQKIRACWQAMQ*
Ga0137404_101965992	3300012929	Vadose Zone Soil	LAALELTWSYAGYHAFSADGGPWCAVSSAGEVLTGGTPDELDREIRAHWEAMQ*
Ga0137404_116558201	3300012929	Vadose Zone Soil	DGGYHAFSADGGTWCAVSSAGEVLTGDTPDALSRAIRAHWQAMQ*
Ga0182035_110599133	3300016341	Soil	WADGGYHAFSADHGTWSAISSAGQVLTGATPDELDRKIRAYWQARQ
Ga0182038_109078481	3300016445	Soil	GDSALSALEEAWAEGGYHAFSADHGIWSAIGSAGEVLTGATSDELDRKIRAHWQAMQ
Ga0187802_102633611	3300017822	Freshwater Sediment	SVDDGIWSAISSAGEVLTGDTPDTLTAAIRAHWQARQ
Ga0187807_11360553	3300017926	Freshwater Sediment	AGAGYHGFSVDNGTWSAIGSAGDVFTGATPDELGQKIRAHWQARL
Ga0187780_113681932	3300017973	Tropical Peatland	ASGGYHGFSADGGTWCAISSAGQVLTGRTPDELNQAIRAHWQAMR
Ga0187777_109369193	3300017974	Tropical Peatland	VLAAPKEAWADGGYHAFSADHGTWSAISSAGQVLTGATPDELDRKIRAHWQVRPSQGAGR
Ga0187890_103229661	3300018044	Peatland	ALEQAWAQGDYHGFGAGHGTWSIGGAGEVLPGATPGELDPKIRAHWQETQ
Ga0187772_112066162	3300018085	Tropical Peatland	PVAVDQYQALAELELAWADGGYHGFTADAGIWCAVSSAGEVLTGSTPDALARAIRAHWLAMRG
Ga0187772_112112912	3300018085	Tropical Peatland	ADGGLWSAISSAGDVLTGDTPDALTRKIRAHWQAMQ
Ga0066662_114863642	3300018468	Grasslands Soil	DGGYHGFSADDGLWSAISSAGEVLTGDTPDALTRRIQAHWQAMQ
Ga0210395_104305593	3300020582	Soil	AVDKDRALTELELAWSEGGYHGFTAAGGTWCAITSAGEVLTGATPDELARAIRAHWRAMR
Ga0210395_110279941	3300020582	Soil	YHGFTVEGGTWGAISSAGEVLTGGTPDALNRAISAHWQALRG
Ga0210405_101906872	3300021171	Soil	VATAKTAELELAWSDGGYHGFTVEGGTWGAISSAGEVLTGGTPDVLNLAISAHWQAMRG
Ga0210408_102175041	3300021178	Soil	YHGFCVDGGTWSAISSAGDVLTGDTPDALTQKIRAHWQAMQ
Ga0210408_102731643	3300021178	Soil	MAQLAWSDGGYHGFTVEGGTWFAISSAGEVRAGGTPDALNRTIQAHWQATRG
Ga0210408_112498092	3300021178	Soil	NAALAELELAWADGGYHGFSVGDGTWSAISSAGEVLTGDTPDALTRKIRAHWQAMQ
Ga0210396_106609491	3300021180	Soil	EDAALSALEEAWAEGGYHAFSADHGIWSAIGGAGEVLTGSTPDELDRKIRAHWQAMQ
Ga0213881_101821682	3300021374	Exposed Rock	TWSDAGYHAFSADGGPWCAVSSAGQVLTGGTPDELDRRIRAHWEAMQ
Ga0213881_101898253	3300021374	Exposed Rock	GRYHGFSAGDGTWSAISSAGEVLTGDTPDALTTKIRAHWQAMQ
Ga0210393_116776842	3300021401	Soil	RDRALAELELAWSGGGYHGFTAAGGTWCPVTSAGELLSGTTPEELARAIRAHWQGMRG
Ga0210393_116782141	3300021401	Soil	AEGGYHEFSADHGTWSAIGSAGEVLTGSTPDELDRKIRAHWQAMQ
Ga0210385_108224672	3300021402	Soil	ELELTWAAGGYHGFSAADGTWSAISSAGEVLTGTTPDELGRTIRAHWQASQ
Ga0210384_110883121	3300021432	Soil	MAQLAWSDGGYHGFTVEGGTWFAINSAGEVRAGGTPDALNRTIQAHWQATRG
Ga0210402_103112461	3300021478	Soil	EDAALAELELAWADGGYHAFSADGGTWAAITNAGEVLAGDTVDALDQAIRAHWQGWQ
Ga0210402_114189471	3300021478	Soil	EDAALAALEEAWADGGYHAFSVDHGTWSAVGSAREVLTGAAPDELDRKIRAHWQEMQ
Ga0247666_11278712	3300024323	Soil	LAELKLAWSDGGYHGFTVEGGNWGAISSAGEVLTGGTPDALNRAIREHWQALRG
Ga0207692_101675621	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EDAALAELELAWTDGGYHAFSADGTWCAVSSAGEVLTGATPDALDRAIRAHWQAMQ
Ga0207692_110834132	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	FSAGGGHWCAVSSAGEVLTGATPDALDRAIRAHWQAMQ
Ga0207684_100834471	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AWSEGGYHGFTVEGGTWGAISSAGEVLTGGTPDALNLAISAHWQAMRG
Ga0207684_104178741	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VDGGTWAAISSAGEVLTAGTPDALARAIRAHWQAMQ
Ga0207663_109077361	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LEEAWADGGYHAFGVEDEFWSAISSAGEVLTGSTPDELDRNIRIHWQAMQ
Ga0207665_107824931	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AWADGGYHAFGVEDEFWSAISSAGEVLTGSTPDELDRNIRAHWQAMQ
Ga0207665_110413441	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AWSEGGYHGFTVEGGTWGAISSAGEVLTGGTPDTLNRAIRAHWQALRG
Ga0209648_101055264	3300026551	Grasslands Soil	DLAWADGGYHGFSADGGTWSAISSAGDVFTGDTPDALTQKIRAHWQAIQ
Ga0209648_103306723	3300026551	Grasslands Soil	FSAEGGTWCAITSAGQVLTAGTPDELARGIRAHWQAMQ
Ga0209517_107109563	3300027854	Peatlands Soil	WSEGGYHGFTAAGGTWCAITSAGEVLTGATPDDLVSAIRAHWQAMRA
Ga0209166_104069641	3300027857	Surface Soil	LAELELAWAAEGYHGFSAGGGTWFAVTSAGEVLTGSTPDELSWAIRAHWQAMQ
Ga0209415_105698142	3300027905	Peatlands Soil	GGYHGFSAADDGLWSAISSSGEVLTGDTPDALTMKIRAHWQAMQ
Ga0209698_112543741	3300027911	Watersheds	GYHGFSADGDSWPAVSSAGDMLTGETPEVLDREIRAHWQARAGR
Ga0268264_106783111	3300028381	Switchgrass Rhizosphere	WSDGGYHGFTVEGGNWGAISSAGEVLTGGTPDALNRAIREHWQALRG
Ga0307280_100461461	3300028768	Soil	KAWADGGYHGFGVDGGLWSAVSSAGEVLTGDTPDGLSQAVRTHWQAMQ
Ga0302184_103427033	3300030490	Palsa	AALAALEEAWAAGGYHAFGVDHGTWSAIGNAGQVLTGTTPDELDQKIRAHWQAMQ
Ga0316363_100142468	3300030659	Peatlands Soil	WAGGGYHGFSADGGTWCAITSAGDVLTGATVDALNRAIRAHWQAMQ
Ga0316363_100844523	3300030659	Peatlands Soil	RTWADGGYRGFSADGGVWSAISSAGEVLTADTPDALATRIRAHWQAMCS
Ga0310038_104139302	3300030707	Peatlands Soil	DEGRALAELELAWADGGYHGFSADGGTWCAVSNAGDVLTGGTPDALNRAIRAHWQAMQ
Ga0310038_104255193	3300030707	Peatlands Soil	ELAWTDGGYHGFSVDDGLWSAITSAGDVLTGDTPDALTRKIRAHWQVMQ
Ga0302324_1034742473	3300031236	Palsa	EAWAAGGYHAFGVDHGTWSAIGNAGQVLTGTTPDELDQKIRAHWQAMQ
Ga0318516_108182271	3300031543	Soil	GKALAELELAWADVGYHGFSADGDTWSAISSAGDVLTGATVDELDRAIRAHWQDRQ
Ga0318573_106967971	3300031564	Soil	EREEAWASGGYHGFSADDGTWSAIGSAGEVLTGATPDELGRKIRAHWQAMQ
Ga0306917_114396301	3300031719	Soil	QDAALAALEEAWADGGYHAFSADHGTWSAISSAGQVLTGATPDELDRKIRAYWQARQ
Ga0318568_110497072	3300031819	Soil	ALSALEEAWAEGGYRAFSADHGIWSAIGSAGEVLTGATSDELDRKIRAHWQAMQ
Ga0318567_103132281	3300031821	Soil	DGDRALAALELAWANGGYHGFSADGGLWSAISNAGDVLTGDTPDALAQKIRAHWQAMQ
Ga0307478_108120131	3300031823	Hardwood Forest Soil	MQTATPPALTWTPGGYHGFSADGDTWSAVTSAGEVLTGATPDELDRKIRAHWQAMQ
Ga0307478_110095851	3300031823	Hardwood Forest Soil	VLAELEREWADGGYHGFSADGGLWSAVSSNGDVLTGDTPDALDQRVRAHWQAMQ
Ga0318551_106424093	3300031896	Soil	EEAWAEGGYHAFSADHGIWSAIGSAGEVLTGATSDELDRKIRAHWQAMQ
Ga0307479_109194841	3300031962	Hardwood Forest Soil	RLLKEASEGGYHAFSADHGIWSAIGSAGEVLTGSTRDELDRKIRAHWRAMQ
Ga0306924_105720521	3300032076	Soil	AEGGIWAAINSAGEVLTGAILDALARAIRANWQAMQ
Ga0311301_101627661	3300032160	Peatlands Soil	VDEDRSVAALELAWADCGYHGFSANDGLWSAISSAGDVLTGDTPDALDRAIRAHWQAKQ
Ga0311301_103194323	3300032160	Peatlands Soil	LNWHGPTGGYHGFSAGDGTWSAISSAGEVLTGDTPDALIRKIRAHWQAMQ
Ga0311301_105333691	3300032160	Peatlands Soil	DEDAALAALEETRAEGGYHAFSADHGTWPAIGGAGEVLTGATLDELDRKIRAHWQETQ
Ga0311301_108685463	3300032160	Peatlands Soil	GRALAELTWTGGRYHGFSADGGTWSAISSAGDVLMGDTPDALATKIRAHWQAMQ
Ga0311301_110831793	3300032160	Peatlands Soil	DGGTWCAITSAGDVLTGATVDALNRAIRAHWQAMQ
Ga0306920_1016092763	3300032261	Soil	ELAWADGGYHGFSADSGLWSAISNAGDVLTGDTPDALTRKIRAHWQAMQ
Ga0306920_1035825223	3300032261	Soil	PALAALELAWANSGYHGFSADGGLWSAISNAGDVLTSDTPDALAQKIRAHWQAMQ
Ga0335082_116321522	3300032782	Soil	QPHLRRTGLAALEEAWAEGGYHASSVDHGPWSAIGSAGDVLTGDTPDALTRKIRAHWQAM
Ga0335078_127398891	3300032805	Soil	GFSVDDGTWSAISSAGEVLTGDTPDSLTRKIRALWQAMQ
Ga0335080_119861792	3300032828	Soil	GYHGFSGDGGTWCAISSAGQVLTGRTPDELNQAIRAHWQAMR
Ga0335081_101823413	3300032892	Soil	LEVAWTDGGYHGFSVDDGLWSAISGAGDVLTGDTPDALTHKIRAHWQAMQ
Ga0335081_107136183	3300032892	Soil	EQAWAAGGYHGFTAGAGIWCAITSAGQVLAGGTADELARKIRAHWQAMQ
Ga0335081_110607311	3300032892	Soil	YHAFSSVGGTWCAVSSAGEVLTGGTPDELNRAIRAHWQGKQ
Ga0335084_122433041	3300033004	Soil	LAALEDAWTEGGYHAFSVDDGTWSAIGSAGEVLTAATPDELDRKIRAHWQEMQ
Ga0335077_105344271	3300033158	Soil	LELAWSDGGYHGFTVEGGIWGALSSAGEVLTGGTPDALNRAISAHWQAMRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055971

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences